RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AREL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000119682

Ensembl transcript IDs: ENST00000356357.9, ENST00000469797.5, ENST00000481010.6, ENST00000553279.5, ENST00000554070.1, ENST00000554525.1, ENST00000555249.1, ENST00000555330.5, ENST00000556202.5, ENST00000556327.5, ENST00000556589.5, ENST00000556860.1, ENST00000557401.5, ENST00000557688.1, ENST00000680030.1, ENST00000681099.1, ENST00000681535.1, ENST00000681599.1

Found 1465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGAGTCTTCATCTTCCTCGTCAACAGCAGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATGGGTGGCAGGTGCCATGGAGTGCTG +
Preference number: 1 (lower is better)
Translates to: GESSSSSSTAVDGRR*EEVMCMGGRCHGVL
Trigger: CAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGAAGATGAAGACTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 90 bp CAGTCCTTAGAGGCAGTCCAGTGCCATGGCCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCCCTC +
Preference number: 1 (lower is better)
Translates to: QSLEAVQCHGLCLPL*SGTAPMGHLLSVPL
Trigger: GAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCCATGGCACTGGACTGCCTCTAAGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 90 bp TCCTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCATGGAGTGCTGCTACAGTTGGTAGCA +
Preference number: 1 (lower is better)
Translates to: SSSTAVDGRRWEEVM*MGGRCHGVLLQLVA
Trigger: TGCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 90 bp CGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCCCTCTCTCCTaGCTCCTGATGAGAAGAGGCAATCACCCCACCCATGAGAAGGAC +
Preference number: 1 (lower is better)
Translates to: RDCSYGPPPICPPLS*LLMRRGNHPTHEKD
Trigger: GTCCTTCTCATGGGTGGGGTGATTGCCTCTTCTCATCAGGAGCCAGGAGAGAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp AGTGCCATGGCCTATGCCTACCATTGTGCAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCCCCCTCTCTCCTGGCTCCTGATGAG +
Preference number: 1 (lower is better)
Translates to: SAMAYAYHCAAGLLL*ATSYLSPSLLAPDE
Trigger: CTCATCAGGAGCCAGGAGAGAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCCATGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp CAGCACCTTGTCCTGGTCCCTGAGGAGAGCAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACC +
Preference number: 1 (lower is better)
Translates to: QHLVLVPEESSDHVA*RILGYRDPDAGSRT
Trigger: GGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACATGGTCACTGCTCTCCTCAGGGACCAGGACAAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp GTAACTTGCGCCCAGAAGCTCCAGAGAGCATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCG +
Preference number: 1 (lower is better)
Translates to: VTCAQKLQRAWEPTG*QESGQSMPKPSQPS
Trigger: CGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCATGCTCTCTGGAGCTTCTGGGCGCAAGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 90 bp AGAGGGCGGCAAAGCCTCCAGGTGGTAGCTGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCAACTCCTCCTGGGTCAGACTGGAAA +
Preference number: 1 (lower is better)
Translates to: RGRQSLQVVAERSLL*TEVAEPTPPGSDWK
Trigger: TTTCCAGTCTGACCCAGGAGGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGGCTTTGCCGCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 90 bp GACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCAT +
Preference number: 1 (lower is better)
Translates to: DRRVVRACQSPRNPR*WPAAASCAPLHRSH
Trigger: ATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR CCA 90 bp GTCTGTAACTTGCGCCCAGAAGCTCCAGAGAGCATGGGAGCCAACTaGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACC +
Preference number: 1 (lower is better)
Translates to: VCNLRPEAPESMGAN*MTGEWSEHAKALAT
Trigger: GGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCATGCTCTCTGGAGCTTCTGGGCGCAAGTTACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 90 bp TTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACCTGTCCAAGAAAGAGA +
Preference number: 1 (lower is better)
Translates to: LPTSRPANSYIFRRR*AGRLGLGCTCPRKR
Trigger: TCTCTTTCTTGGACAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR GCA 90 bp GAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCA +
Preference number: 1 (lower is better)
Translates to: EGLFLMIPANRRAQT*FQEAKALPKSCLVS
Trigger: TGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp AACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCTGCTACAGTTGGTAGCATTATAAAG +
Preference number: 1 (lower is better)
Translates to: NSSGWPALGRGHVHG*QVPWSAATVGSIIK
Trigger: CTTTATAATGCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp CCCTCTCTCCTGGCTCCTGATGAGAAGAGGCAATCACCCCACCCATaGGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAA +
Preference number: 1 (lower is better)
Translates to: PSLLAPDEKRQSPHP*EGLKYQSGQVVRAK
Trigger: TTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTGCCTCTTCTCATCAGGAGCCAGGAGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp TCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGAC +
Preference number: 1 (lower is better)
Translates to: SWGIETLMLDPGPQG*VRSAPMCQERTNDD
Trigger: GTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp TTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACTAATGCTTGGTTGTTG +
Preference number: 1 (lower is better)
Translates to: LPTSRPANSYIFRRR*AGRLGLGCTNAWLL
Trigger: CAACAACCAAGCATTAGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp CAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTC +
Preference number: 1 (lower is better)
Translates to: QHPCAKKGQMMTAKD*GQAGTVAAQEGLFL
Trigger: GAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp GCTGCTAGAATGTTCCTCTCCTTACAGCTGAGCTCCACAGGAGGTTaGATGCCATCATCCACCACCAGTGTGAGCAGCTTATGGACAGGG +
Preference number: 1 (lower is better)
Translates to: AARMFLSLQLSSTGG*MPSSTTSVSSLWTG
Trigger: CCCTGTCCATAAGCTGCTCACACTGGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGAACATTCTAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 90 bp CCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGAT +
Preference number: 1 (lower is better)
Translates to: PTACRLLLERTHRDT*PRAVPQTHTFSGAD
Trigger: ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
3UTR CCA 90 bp TGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGTAGCATTATAAAGATAAGCCTCAAA +
Preference number: 1 (lower is better)
Translates to: WPALGRGHVHGWQVP*SAATVGSIIKISLK
Trigger: TTTGAGGCTTATCTTTATAATGCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp ATATTTACATCATCAGCTGCAACTGCCTGGCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAA +
Preference number: 1 (lower is better)
Translates to: IFTSSAATAWPFHLA*RICSRAWSLPIFQK
Trigger: TTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 90 bp TTTAAGGGTCTCCACACCAGTTTCCCAACAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTGAGATCTTCAAAGGACCAAATAAAT +
Preference number: 1 (lower is better)
Translates to: FKGLHTSFPTGLSPV*HLPQLLRSSKDQIN
Trigger: ATTTATTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTGTGGAGACCCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp ATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTG +
Preference number: 1 (lower is better)
Translates to: ISSLQASHMPRHAPL*RLQLSYPSYSSVYL
Trigger: CAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp ACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTaGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAA +
Preference number: 1 (lower is better)
Translates to: TGLAKTINSISRISL*KAAGGENSEKRLPK
Trigger: TTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp ACAAAATATTTACATCATCAGCTGCAACTGCCTGGCCCTTTCACCTaGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCC +
Preference number: 1 (lower is better)
Translates to: TKYLHHQLQLPGPFT*PDESAAGLGLCQFS
Trigger: GGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAATATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp GAACCTAATAAGCTTCCTCCCTCCTTAGTTCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTG +
Preference number: 1 (lower is better)
Translates to: EPNKLPPSLVLLPDN*WSKGEYRGWQVFTV
Trigger: CACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAACTAAGGAGGGAGGAAGCTTATTAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 90 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTC +
Preference number: 1 (lower is better)
Translates to: QPRECRVSRKNTWKV*LLDVTDFSNETPVL
Trigger: GAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CCA 90 bp GCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACA +
Preference number: 1 (lower is better)
Translates to: AWKQPRECRVSRKNT*KVCLLDVTDFSNET
Trigger: TGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR TCA 90 bp ATTTTGTTCCTGGACACACTCGGAAGGTGTAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCTTCACTGAGAATTGCTTTGGTGACA +
Preference number: 1 (lower is better)
Translates to: ILFLDTLGRCKGARG*SSGRTPSLRIALVT
Trigger: TGTCACCAAAGCAATTCTCAGTGAAGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTTACACCTTCCGAGTGTGTCCAGGAACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 90 bp TGCTCTGCCTCACTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTaGAGGGTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTAGC +
Preference number: 1 (lower is better)
Translates to: CSASLVCSEYPQLLA*RVVVNETINTKAPS
Trigger: GCTAGGAGCTTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAGTGAGGCAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR CCA 90 bp ATGACCTTTTCTCTGAAATGCCATGAGCCACCAACAACTACTGCATaGGCTTTGAAGTCAGACACACTGATGTCTCCAGTCCCACACATC +
Preference number: 1 (lower is better)
Translates to: MTFSLKCHEPPTTTA*ALKSDTLMSPVPHI
Trigger: GATGTGTGGGACTGGAGACATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 90 bp AATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGA +
Preference number: 1 (lower is better)
Translates to: NLQQGLVSANFPETC*HSPRYSLMSGLLQR
Trigger: TCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp GATCATGCAAAGGAGGAAGTCTCTTCTGACTTGGTGTCTTCTTCATaGATGTTTGGGCCAGGTGTCTTGAGTACTCATTCTCTCTGGCCT +
Preference number: 1 (lower is better)
Translates to: DHAKEEVSSDLVSSS*MFGPGVLSTHSLWP
Trigger: AGGCCAGAGAGAATGAGTACTCAAGACACCTGGCCCAAACATTCATGAAGAAGACACCAAGTCAGAAGAGACTTCCTCCTTTGCATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR CCA 90 bp TTCCAACAAGGCATGTCTGCTGACCTTCAGGGTGACTTTGGAATGTaGTCTTTTCATATGTACCTGCCGAAGCTCTCGCTGGAAAAAGTT +
Preference number: 1 (lower is better)
Translates to: FQQGMSADLQGDFGM*SFHMYLPKLSLEKV
Trigger: AACTTTTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAGCAGACATGCCTTGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp ATGGAATTGTTGGTGGGATTATCATACTCATCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCACAGGTCAATACAAGAGTAGAAAAG +
Preference number: 1 (lower is better)
Translates to: MELLVGLSYSSRGTI*RVCGCPQVNTRVEK
Trigger: CTTTTCTACTCTTGTATTGACCTGTGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCCACCAACAATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp CTTCTGACTTGGTGTCTTCTTCATGAATGTTTGGGCCAGGTGTCTTaGGTACTCATTCTCTCTGGCCTGCCTATTTCCCTTGTTCTTTTT +
Preference number: 1 (lower is better)
Translates to: LLTWCLLHECLGQVS*VLILSGLPISLVLF
Trigger: AAAAAGAACAAGGGAAATAGGCAGGCCAGAGAGAATGAGTACTCAAGACACCTGGCCCAAACATTCATGAAGAAGACACCAAGTCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR TCA 90 bp GGATGCACTAATGCTTGGTTGTTGTCACTGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCAT +
Preference number: 1 (lower is better)
Translates to: GCTNAWLLSLNRVKS*LVVSNSALQISSNH
Trigger: ATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCACCAATCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCATTAGTGCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 90 bp CTTCATCCTGGAAAACAACCTCAAAGTTCTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTTTCAGAGACAGAGCCAAACATCACA +
Preference number: 1 (lower is better)
Translates to: LHPGKQPQSSCSNLR*RNSEWLSETEPNIT
Trigger: TGTGATGTTTGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCCAGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR CCA 90 bp CTTCATCCTGGAAAACAACCTCAAAGTTCTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTTTCAGAGACGATTCCAACAAGGCAT +
Preference number: 1 (lower is better)
Translates to: LHPGKQPQSSCSNLR*RNSEWLSETIPTRH
Trigger: ATGCCTTGTTGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCCAGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp TCTTCAAAGGACCAAATAAATGATAGCAGCATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCT +
Preference number: 1 (lower is better)
Translates to: SSKDQINDSSMVLFS*QNEELSLHTMPKWP
Trigger: AGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGCTGCTATCATTTATTTGGTCCTTTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp CTGGTTGGGTTGCAATGGTGCCTAAGATGCTCTGAAAAAGTGCTATaGCTAGAGCTTAAAATGACAGGTCTAGCCAAGACAATCAACTCA +
Preference number: 1 (lower is better)
Translates to: LVGLQWCLRCSEKVL*LELKMTGLAKTINS
Trigger: TGAGTTGATTGTCTTGGCTAGACCTGTCATTTTAAGCTCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp TGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATGGAATTGTTaGTGGGATTATCATACTCATCTCGGGGTACTATTTGAAGGGTGT +
Preference number: 1 (lower is better)
Translates to: WTRCNCAHLSRTWNC*WDYHTHLGVLFEGC
Trigger: ACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCCACCAACAATTCCATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR TCA 90 bp GAAAGAGATAATGCTTGGTTGTTGTCACTGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCAT +
Preference number: 1 (lower is better)
Translates to: ERDNAWLLSLNRVKS*LVVSNSALQISSNH
Trigger: ATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCACCAATCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCATTATCTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR GCA 90 bp CTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAAC +
Preference number: 1 (lower is better)
Translates to: LVLAIKMACNILRVD*PIGNGSLQQSLLKN
Trigger: GTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp GCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATaGAATTGTTGGTGGGATTATCATACTCATCTCGGGGTACTATTT +
Preference number: 1 (lower is better)
Translates to: AHEWTRCNCAHLSRT*NCWWDYHTHLGVLF
Trigger: AAATAGTACCCCGAGATGAGTATGATAATCCCACCAACAATTCCATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR GCA 90 bp CTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAGTCAATGAG +
Preference number: 1 (lower is better)
Translates to: LVIFSELTAPLGMVA*SKAFLKTQIWEVNE
Trigger: CTCATTGACTTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp CATTCAGGCCTTTTAGGAAATGTTCCACCTCCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCAGCAAATTTAAATAGAAGATTTTAT +
Preference number: 1 (lower is better)
Translates to: HSGLLGNVPPPLSLD*PADIGPANLNRRFY
Trigger: ATAAAATCTTCTATTTAAATTTGCTGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTGGAACATTTCCTAAAAGGCCTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGCCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 2 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 2 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp CAACTGGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: QLDDRRVVRACQSPRNPRGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...GCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 2 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CAACTGGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 2 (lower is better)
Translates to: QLDDRRVVRACQSPRNPRGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...GCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 2 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 2 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGACGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGACAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CAA 90 bp CCGGTACATATCCCATGGGAAAACATTTGGGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGAGCAGTGACCATGTGGCATGGAGGA +
Preference number: 2 (lower is better)
Translates to: PVHIPWENIWASSST*SWSLRRAVTMWHGG
Trigger: TCCTCCATGCCACATGGTCACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 2 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCTTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 2 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPLVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: KASVVSKPAICLGMPHSGWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: LRHASRRPRHCQSPALFQIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLILRVD*PIGNGS
Trigger: GCTACCATTCCCAATGGGGCAGTCAACTCTGAGAAT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCACTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATTCGCATTGGTGACTaGAGTTTGAGCTCCACCTGT +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPIRIGD*SLSSTC
Trigger: ACAGGTGGAGCTCAAACTCCAGTCACCAATGCGAAT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 2 (lower is better)
Translates to: GLTNLQQGLVSANFPETCTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 2 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 2 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTCAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCATGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: LRHASRRPRHCQSPALFQRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCACCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGACGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 2 (lower is better)
Translates to: GLTNLQQGLVSANFPETCVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGGTAGGGAGGCACAGCTaGTTAAAACATGTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAVGRHS*LKHVCA
Trigger: TGCACACACATGTTTTAACCAGCTGTGCCTCCCTAC...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: RSAPMCQERTNDDCERLRRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 2 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR TCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTTCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: ECRVSRKNTWKVCLLDVTSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...AGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: RSAPMCQERTNDDCERLRIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGALCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 2 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 2 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 2 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 2 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 2 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 2 (lower is better)
Translates to: GLTNLQQGLVSANFPETCWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 2 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAACTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 2 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGCCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 2 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPALLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 2 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 2 (lower is better)
Translates to: TSVPITNSGKSISSLQASPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...GCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 2 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGACCTTCAGGGTGACTTTGGAATGTGGTCTTTTCATATGTACCTGCCGAAGCTCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LTFRVTLECGLFICTCRSSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...GCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 2 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 2 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: GPTACRLLLERTHRDTCPHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCTGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCCGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 2 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 2 (lower is better)
Translates to: KASVVSKPAICLGMPHSGELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAACAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 2 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: TCPRAVPQTHTFSGADERQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR GCA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATCGATTAGGGTTGGGATaGACCTGTCCAAGAAAGAGA +
Preference number: 2 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADRLGLG*TCPRKR
Trigger: TCTCTTTCTTGGACAGGTGCATCCCAACCCTAATCG...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR-3UTR GCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 2 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTTFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: KASVVSKPAICLGMPHSGACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 2 (lower is better)
Translates to: HQFPNRAEPRVPSPSATERIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTTGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 2 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 2 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCCCAGTTGGAGAAATTCCGAGTaGCTTTCAGAGACAGAGCCA +
Preference number: 2 (lower is better)
Translates to: QIVLCRLAQTIPGEALPSWRNSE*LSETEP
Trigger: TGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCA...ACTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR-3UTR CCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACCCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 2 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGASRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp ACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGT +
Preference number: 2 (lower is better)
Translates to: TSVPITNSGKSISSLQASGWQVP*SAATVG
Trigger: ACCAACTGTAGCAGCACTCCATGGCACCTGCCACCC...GCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CAA 90 bp AGAGACGATTCCAACAAGGCATGTCTGCTGACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATATGTACCTGCCGAAGCTCTCGCTGG +
Preference number: 2 (lower is better)
Translates to: RDDSNKACLLTFRVT*ECGLFICTCRSSRW
Trigger: CCAGCGAGAGCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAGCAGACATGCCTTGTTGGAATCGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 2 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACTCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 2 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHSSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 2 (lower is better)
Translates to: FLCLSAAREHQAERESGILENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAACAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 2 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTACTTGCTGGTTTTGGCAATAAAGATG +
Preference number: 2 (lower is better)
Translates to: LRHASRRPRHCQSPA*FQDSVYLLVLAIKM
Trigger: CATCTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 90 bp GTCATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGTGAAGCGAGCTCGGACCAACTGCTT +
Preference number: 2 (lower is better)
Translates to: VICFKVLVMHTQSYD*GQERAGEASSDQLL
Trigger: AAGCAGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
3UTR CAA 90 bp TTTTCTCTGAAATGCCATGAGCCACCAACAACTACTGCATGGGCTTaGAAGTCAGACACACTGATGTCTCCAGTCCCACACATCAGCAGC +
Preference number: 2 (lower is better)
Translates to: FSLKCHEPPTTTAWA*KSDTLMSPVPHISS
Trigger: GCTGCTGATGTGTGGGACTGGAGACATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: TSVPITNSGKSISSLQASQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...GCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 2 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGC +
Preference number: 2 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGILRVD*PIGNGS
Trigger: GCTACCATTCCCAATGGGGCAGTCAACTCTGAGAAT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 2 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTGCAGGGCTTGGTCTCTaGCAATTTTCCAGAAACATG +
Preference number: 2 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCAGLGL*QFSRNM
Trigger: CATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGC...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: RSAPMCQERTNDDCERLRTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGTTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 2 (lower is better)
Translates to: LRHASRRPRHCQSPALFQLFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCACTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 2 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: SHLFDILYLFPTLASMKAIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 2 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCTTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGLFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGTTCTTCATGAATGTTTaGGCCAGGTGTCTTGAGTAC +
Preference number: 2 (lower is better)
Translates to: LVCSEYPQLLACRVVVNEFFMNV*ARCLEY
Trigger: GTACTCAAGACACCTGGCCCAAACATTCATGAAGAA...CTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAATGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGAGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 2 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CAA 90 bp CGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: RECRVSRKNTWKVCL*DVTDFSNETPVLSS
Trigger: AGAAGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: QAGHTSVPITNSGKSISSMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 2 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 2 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCATTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp TATATTGAATTTCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGGTATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: YIEFHAKVACGRYGQGAGMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...ACCTGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGAAATTCAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR GCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 2 (lower is better)
Translates to: KASVVSKPAICLGMPHSGILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 2 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: WYQIVLCRLAQTIPGEALQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...GAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR CCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 90 bp TGCCAAAGTCCTGCCTTGTTTCAGGACTCTGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCC +
Preference number: 2 (lower is better)
Translates to: CQSPALFQDSVYLLV*AIKMACNILRVDCP
Trigger: GGGGCAGTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 90 bp CATGGAATTGTTGGTGGGATTATCATACTCATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCCACAGGTCAATACAAGAGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: HGIVGGIIILISGYY*KGVRLPTGQYKSRK
Trigger: TTTTCTACTCTTGTATTGACCTGTGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCCACCAACAATTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGACCTTCAGGGTGACTTTGGAATGTGGTCTTTTCATATGTACCTGCCGAAGCCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: LTFRVTLECGLFICTCRSLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...GCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACTGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 2 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWELCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 2 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: VYLLVLAIKMACNILRVDIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TATAAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: YKDKPQSKCSRLKWTHCVKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...AACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGAGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLETQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: VYLLVLAIKMACNILRVDRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCACCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 2 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 2 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGCTAGCTTGCAGGGTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTAGCTTGGTGTCTTCTTCATaGATGTTTGGGCCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: LLACRVVVNETINTKAPSLVSSS*MFGPGV
Trigger: GACACCTGGCCCAAACATTCATGAAGAAGACACCAA...GCTAGGAGCTTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR TCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 2 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAATTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWELVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTGGGAAGAGAGGATCATaGAAAGGAGGAAGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: QLLACRVVVNETINTKAPGKRGS*KGGSLF
Trigger: GAAGAGACTTCCTCCTTTGCATGATCCTCTCTTCCC...AGGAGCTTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAACTCTCTCATCTCTTTaGCATATTGTACCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPTLSSL*HIVPFP
Trigger: GGGAAAAGGTACAATATGTCAAAGAGATGAGAGAGT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SHLFDILYLFPTLASMKAMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAAGGACAAATGATGACTaGGAAAGACTGAGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWERTNDD*ERLRSG
Trigger: GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCT...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTTCTAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 2 (lower is better)
Translates to: QSKCSRLKWTHCVRRYSSNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAGGACAAATGATGACTaGGAAAGACTGAGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: VYLLVLAIKMACNILRVDRTNDD*ERLRSG
Trigger: GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: VVVNETINTKAPSIWEERACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...CCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATTCACAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CCA 90 bp ATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCCAGGAATGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: ICFKVLVMHTQSYDLGQECSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...TTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR CCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR CAA 90 bp GTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATaGCTGGCATACTATTCTTACTGTTCTAATCTTTTGCTACAAAAT +
Preference number: 2 (lower is better)
Translates to: VLVLPENTKQRENQG*LAYYSYCSNLLLQN
Trigger: ATTTTGTAGCAAAAGATTAGAACAGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 2 (lower is better)
Translates to: VYLLVLAIKMACNILRVDRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: SHLFDILYLFPTLASMKAVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 2 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIICSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACATCTCTCAAGGACATaGAATTGTTGGTGGGATTAT +
Preference number: 2 (lower is better)
Translates to: ARTPGKSACWMLLISQMRHLSRT*NCWWDY
Trigger: ATAATCCCACCAACAATTCCATGTCCTTGAGAGATG...TCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGAGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 2 (lower is better)
Translates to: ARTPGKSACWMLLISQMRGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...TCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWELGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AATGAGACAATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCATGCAAAGTACTCATTCTCTCTaGCCTGCCTATTTCCCTTGT +
Preference number: 2 (lower is better)
Translates to: NETINTKAPSIWEERIMQSTHSL*PAYFPC
Trigger: ACAAGGGAAATAGGCAGGCCAGAGAGAATGAGTACT...TTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR GCA 72 bp ACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCATGGAGTGCTGCTACAG +
Preference number: 3 (lower is better)
Translates to: TAVDGRRWEEVM*MGGRCHGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 72 bp GGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCTGCTACAGTTGGTAGC +
Preference number: 3 (lower is better)
Translates to: GWPALGRGHVHG*QVPWSAATVGS
Trigger: GCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 72 bp CAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAGTGCTGCTACAGTTGG +
Preference number: 3 (lower is better)
Translates to: QWMAGAGKRSCA*VAGAMECCYSW
Trigger: CCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 72 bp GTGCCATGGCCTATGCCTACCATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCTATCTGTCCCCCTCTC +
Preference number: 3 (lower is better)
Translates to: VPWPMPTIVQRD*SYGPPPICPPL
Trigger: GAGAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCCATGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp GCCTATGCCTACCATTGTGCAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCCCCCTCTCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: AYAYHCAAGLLL*ATSYLSPSLLA
Trigger: AGCCAGGAGAGAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp TCATCTTCCTCGTCAACAGCAGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATGGGTGGCAGGTGCCAT +
Preference number: 3 (lower is better)
Translates to: SSSSSTAVDGRR*EEVMCMGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGAAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCACCTCCTCTTTCACTaGACTGGCCAGCCGATATTG +
Preference number: 3 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCHLLFH*TGQPIL
Trigger: CAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTG...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 72 bp GTAGGCAGCGTGCTATGGGTCGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCGGCAAAGCCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: VGSVLWVGAAII*NEGQRAAKPPG
Trigger: ACCTGGAGGCTTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR CCA 72 bp GTCCTGGTCCCTGAGGAGAGCAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGAGACCCTGATGCTGGA +
Preference number: 3 (lower is better)
Translates to: VLVPEESSDHVA*RILGYRDPDAG
Trigger: TCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACATGGTCACTGCTCTCCTCAGGGACCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp TTGCGCCCAGAAGCTCCAGAGAGCATGGGAGCCAACTaGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: LRPEAPESMGAN*MTGEWSEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCATGCTCTCTGGAGCTTCTGGGCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 3 (lower is better)
Translates to: KASVVSKPAICLGMPHSGGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 72 bp TCATCAGCTGCAACTGCCTGGCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCTTGGTCTCTGCCAATT +
Preference number: 3 (lower is better)
Translates to: SSAATAWPFHLA*RICSRAWSLPI
Trigger: AATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 72 bp AGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACCTGTCCA +
Preference number: 3 (lower is better)
Translates to: SRPANSYIFRRR*AGRLGLGCTCP
Trigger: TGGACAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR TCA 72 bp CAAAGCCTCCAGGTGGTAGCTGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCAACTCCTCCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: QSLQVVAERSLL*TEVAEPTPPGS
Trigger: TGACCCAGGAGGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR GCA 72 bp CTCCACACCAGTTTCCCAACAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTGAGATCTTCAAAGGAC +
Preference number: 3 (lower is better)
Translates to: LHTSFPTGLSPV*HLPQLLRSSKD
Trigger: GTCCTTTGAAGATCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 72 bp TTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGC +
Preference number: 3 (lower is better)
Translates to: FLMIPANRRAQT*FQEAKALPKSC
Trigger: GCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCTGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 3 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPCQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGCAGCTCAGGAGGGCTaGTTCCTCATGATCCCTGCG +
Preference number: 3 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFAAQEG*FLMIPA
Trigger: CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 3 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCAATCTGCAGCAGGGCTaGGTCTCTGCCAATTTTCCA +
Preference number: 3 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPNLQQG*VSANFP
Trigger: TGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGATTGGTGACTGGAGTTaGAGCTCCACCTGTCATGAG +
Preference number: 3 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAIGDWS*SSTCHE
Trigger: CTCATGACAGGTGGAGCTCAAACTCCAGTCACCAAT...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR GCA 72 bp CAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCTGGAGGCTACAGCTCA +
Preference number: 3 (lower is better)
Translates to: QGKASVVSKPAI*LGMPHSGGYSS
Trigger: TGAGCTGTAGCCTCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 3 (lower is better)
Translates to: QTQGKASVVSKPAICLGMGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 3 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAACTACTGCATGGGCTTaGAAGTCAGACACACTGATG +
Preference number: 3 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRTTAWA*KSDTLM
Trigger: CATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 72 bp AGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACTAATGCT +
Preference number: 3 (lower is better)
Translates to: SRPANSYIFRRR*AGRLGLGCTNA
Trigger: AGCATTAGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 72 bp TTCTTTTTAGCAGTCCTTAGAGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTGCAGCGGGACTGCTCC +
Preference number: 3 (lower is better)
Translates to: FFLAVLRGSPVP*PMPTIVQRDCS
Trigger: GGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCCATGGCACTGGACTGCCTCTAAGGACTGCTAAAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 3 (lower is better)
Translates to: KASVVSKPAICLGMPHSGRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 3 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp AAGCTTCCTCCCTCCTTAGTTCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: KLPPSLVLLPDN*WSKGEYRGWQV
Trigger: CACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAACTAAGGAGGGAGGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp CAGAATGAAGAGCTCAGCTTACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGCAGGGAGCAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: QNEELSLHTMPK*PVVDMGREQVR
Trigger: CCTCACCTGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTCATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp CCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATaGGAAAACATTTGGGCAAGCAGCAGCACCTTGTCC +
Preference number: 3 (lower is better)
Translates to: PRVVINLPVHIP*ENIWASSSTLS
Trigger: GGACAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp TACACCTTCTTCGGTTTCTTCACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCTTCATCTTCCTCGTCA +
Preference number: 3 (lower is better)
Translates to: YTFFGFFTFSGV*HSEGESSSSSS
Trigger: TGACGAGGAAGATGAAGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGTGAAGAAACCGAAGAAGGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGATATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: KASVVSKPAICLGMPHSGYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 3 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 3 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 3 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 3 (lower is better)
Translates to: GACGIFWLMVMCVRISGYASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 3 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: PQSKCSRLKWTHCVRRYSISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...AGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 3 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCTCACTGAGAATTGCTTaGGTGACACATAGCAGTACA +
Preference number: 3 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTSLRIA*VTHSST
Trigger: TGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGA...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGACTAATGCTTGGTTGTaGTCACTGAACCGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: LRHASRRPRHCQSPALFQTNAWL*SLNRVK
Trigger: CTTCACCCGGTTCAGTGACAACAACCAAGCATTAGT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp CCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGATCAGTGGTTATGATG +
Preference number: 3 (lower is better)
Translates to: PPDTGEHAASSG*WLCVLGSVVMM
Trigger: CATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 72 bp CTGGACACACTCGGAAGGTGTAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCTTCACTGAGAATTGCT +
Preference number: 3 (lower is better)
Translates to: LDTLGRCKGARG*SSGRTPSLRIA
Trigger: AGCAATTCTCAGTGAAGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTTACACCTTCCGAGTGTGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp ATGTTCCTCTCCTTACAGCTGAGCTCCACAGGAGGTTaGATGCCATCATCCACCACCAGTGTGAGCAGCTTA +
Preference number: 3 (lower is better)
Translates to: MFLSLQLSSTGG*MPSSTTSVSSL
Trigger: TAAGCTGCTCACACTGGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGAACAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 72 bp TGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAAACTCATACATTTTCA +
Preference number: 3 (lower is better)
Translates to: CRLLLERTHRDT*PRAVPQTHTFS
Trigger: TGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
3UTR CCA 72 bp GCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTaGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGA +
Preference number: 3 (lower is better)
Translates to: AKTINSISRISL*KAAGGENSEKR
Trigger: TCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 3 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATACAACCTCAAAGTTCTaGCTCCAATCTGAGATGGAG +
Preference number: 3 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADTTSKF*LQSEME
Trigger: CTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGT...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR CAA 90 bp ACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATACTCAAGGACATGGAATaGTTGGTGGGATTATCATAC +
Preference number: 3 (lower is better)
Translates to: TLADGQLQHPVHLFIGVILKDME*LVGLSY
Trigger: GTATGATAATCCCACCAACAATTCCATGTCCTTGAG...TATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp TGCCGAAGCTCTCGCTGGAAAAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCTATGTTCTTATGCAGG +
Preference number: 3 (lower is better)
Translates to: CRSSRWKKFTLS*KVSEPPMFLCR
Trigger: CCTGCATAAGAACATAGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 72 bp TGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGAGCATGGGAGCCAACT +
Preference number: 3 (lower is better)
Translates to: CVLGSVVMMSVT*AQKLQRAWEPT
Trigger: AGTTGGCTCCCATGCTCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 72 bp ACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGTGTACTTGCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: TCFQEAKALPKS*LVSGLCVLAGF
Trigger: AAAACCAGCAAGTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 72 bp AATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCTaGCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAA +
Preference number: 3 (lower is better)
Translates to: NQLNLQDQSLEG*RRGEFRKATAK
Trigger: TTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCA +
Preference number: 3 (lower is better)
Translates to: QPRECRVSRKNT*KVCLLDVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CCA 72 bp CTGGGAAGAGGTCATGTGCATGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGTAGCATTATAAAGATA +
Preference number: 3 (lower is better)
Translates to: LGRGHVHGWQVP*SAATVGSIIKI
Trigger: TATCTTTATAATGCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 3 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 3 (lower is better)
Translates to: AQLTYHAKVACGRYGQGARENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGGAGTTGACTGCCCCATaGGGAATGGTAGCTTGCAGC +
Preference number: 3 (lower is better)
Translates to: KMACNILRVDCPIGNGSLELTAP*GMVACS
Trigger: GCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTC...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGTAATATTCTCAGAGTaGACTGCCCCATTGGGAATG +
Preference number: 3 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFVIFSE*TAPLGM
Trigger: CATTCCCAATGGGGCAGTCAACTCTGAGAATATTAC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCACAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 3 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPTQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 72 bp CAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCACTCATGTCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: QGLVSANFPETC*HSPRYSLMSGL
Trigger: GAGACCAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp AAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTTAGGATCAGTGGTTAT +
Preference number: 3 (lower is better)
Translates to: KSSRHRGACGIF*LMVMCVRISGY
Trigger: ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: QAGHTSVPITNSGKSISSYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCATCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 3 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 3 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVRENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 3 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGAAGTGGCACACAATTTaGGTCTTAGAAGGAACCACC +
Preference number: 3 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQKWHTI*VLEGTT
Trigger: GGTGGTTCCTTCTAAGACCAAAATTGTGTGCCACTT...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGCCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 3 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 3 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATA +
Preference number: 3 (lower is better)
Translates to: RSAPMCQERTNDDCERLRTFRVT*ECGLFI
Trigger: TATGAAAAGACCACATTCCAAAGTCACCCTGAAGGT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 72 bp AGGGTGACTTTGGAATGTGGTCTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAAAAGTTCACCTTGTCC +
Preference number: 3 (lower is better)
Translates to: RVTLECGLFICT*RSSRWKKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp GTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTTCTTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: VCLLDVTDFSNETPVLSSYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...AGAAGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 3 (lower is better)
Translates to: GACGIFWLMVMCVRISGYVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGTGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 3 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLCQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 3 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 3 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIITQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 3 (lower is better)
Translates to: ECRVSRKNTWKVCLLDVTKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...AGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR TCA 72 bp AGGCCTTTTAGGAAATGTTCCACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGGGCCAGCAAATTTAAA +
Preference number: 3 (lower is better)
Translates to: RPFRKCSTSSFT*LASRYWASKFK
Trigger: TTTAAATTTGCTGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTGGAACATTTCCTAAAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR GCA 72 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGATTTCTCAAATGAGACA +
Preference number: 3 (lower is better)
Translates to: ECRVSRKNTWKV*LLDVTDFSNET
Trigger: TGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR GCA 72 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTaGGTTCGACGATATTCTTCTCATCCTCACTTAGGA +
Preference number: 3 (lower is better)
Translates to: PQSKCSRLKWTH*VRRYSSHPHLG
Trigger: TCCTAAGTGAGGATGAGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CCA 72 bp GGAAAACAACCTCAAAGTTCTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTTTCAGAGACAGAGCCA +
Preference number: 3 (lower is better)
Translates to: GKQPQSSCSNLR*RNSEWLSETEP
Trigger: TGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR-3UTR CAA 90 bp ATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCATGCAAAGGAGGAAGTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: INTKAPSIWEERIMQRRKYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...CTTCCTCCTTTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CAA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 3 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 3 (lower is better)
Translates to: VYLLVLAIKMACNILRVDRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGTTTGGGCCAGGTGTCTaGAGTACTCATTCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLFGPGV*STHSLW
Trigger: CCAGAGAGAATGAGTACTCAAGACACCTGGCCCAAA...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CAA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTCCTGAAGTGGACACATaGCGTTCGACGATATTCTTC +
Preference number: 3 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIPEVDT*RSTIFF
Trigger: GAAGAATATCGTCGAACGCAATGTGTCCACTTCAGG...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp ATCCTGGAAAACAACCTCAAAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGTGGCTTTCAGAGACAG +
Preference number: 3 (lower is better)
Translates to: ILENNLKVLAPI*DGEIPSGFQRQ
Trigger: CTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR TCA 72 bp AATGCTTGGTTGTTGTCACTGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGTGCTTTGCAGATTAGC +
Preference number: 3 (lower is better)
Translates to: NAWLLSLNRVKS*LVVSNSALQIS
Trigger: GCTAATCTGCAAAGCACTATTTGATACCACCAATCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR TCA 72 bp ATCCTGGAAAACAACCTCAAAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGTGGCTTTCAGAGACGA +
Preference number: 3 (lower is better)
Translates to: ILENNLKVLAPI*DGEIPSGFQRR
Trigger: TCGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 72 bp TGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATaGAATTGTTGGTGGGATTATCATACTCATCTCGGG +
Preference number: 3 (lower is better)
Translates to: WTRCNCAHLSRT*NCWWDYHTHLG
Trigger: CCCGAGATGAGTATGATAATCCCACCAACAATTCCATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CCA 72 bp GGAAAACAACCTCAAAGTTCTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTTTCAGAGACGATTCCA +
Preference number: 3 (lower is better)
Translates to: GKQPQSSCSNLR*RNSEWLSETIP
Trigger: TGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp ACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCA +
Preference number: 3 (lower is better)
Translates to: TPGKSACWMLLISQMRHQWKVCL*DVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCA...CTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR GCA 72 bp TTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAAACACAAATTTGGGAA +
Preference number: 3 (lower is better)
Translates to: FSELTAPLGMVA*SKAFLKTQIWE
Trigger: TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 72 bp TCACTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTaGAGGGTTGTTGTGAATGAGACAATAAATACTAAA +
Preference number: 3 (lower is better)
Translates to: SLVCSEYPQLLA*RVVVNETINTK
Trigger: TTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR CCA 72 bp AAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTaGACACATTGCGTTCGACGATATTCTTCTCATCCT +
Preference number: 3 (lower is better)
Translates to: KDKPQSKCSRLK*THCVRRYSSHP
Trigger: AGGATGAGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 3 (lower is better)
Translates to: PLGMVACSKAFLKTQIWERENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACCAGGACTCTGTGTACTaGCTGGTTTTGGCAATAAAG +
Preference number: 3 (lower is better)
Translates to: VYLLVLAIKMACNILRVDQDSVY*LVLAIK
Trigger: CTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTG...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 3 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 3 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 3 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp GTGAATGAGACAATAAATACTAAAGCTCCTAGCATATaGGAAGAGAGGATCATGCAAAGGAGGAAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: VNETINTKAPSI*EERIMQRRKSL
Trigger: AAGAGACTTCCTCCTTTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGGTCTCCACCCGGCCTaGGAACCGGCTCGGGGGATT +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLGLHPA*EPARGI
Trigger: AATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGCCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTGGCCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 4 (lower is better)
Translates to: LVNSSGWPALGRGHVHGWPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...CCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp AGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAACCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RLLLERTHRDTCPRAVPQPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCGCCGAGGATCACAGCTaGAGCTTTAAACGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCAEDHS*SFKRGP
Trigger: GGGCCCTCGTTTAAAGCTGCAGCTGTGATCCTCGGC...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
CDS-3UTR GCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGCAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATGCATGGGTGGCAGGTaGCATGGAGTGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPCMGGR*HGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSPPPLS*EGAAAL
Trigger: GAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: DTCPRAVPQTHTFSGADEVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATGCATGGGTGGCAGGTaGCATGGAGTGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQCMGGR*HGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGTGCATGGGTGGCAGGTaGCATGGAGTGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGCMGGR*HGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCA...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATERVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAAATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RLLLERTHRDTCPRAVPQIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLREPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LKPFPARPSPVQSFFILEGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...TTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAACCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGATCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTCCCCGAGCCGGGGGTTaGAGCGCGACGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSPRAGG*SATKFH
Trigger: GTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGG...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: ECRVSRKNTWKVCLLDVTPPPLS*EGAAAL
Trigger: GAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGG...AGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPARSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTGGCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: LVNSSGWPALGRGHVHGWHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...CCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp AGCTGGTTAAAACATGTGTGTGCAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: SWLKHVCAVGSVLWVGAAAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...TGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGTTTTAACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACCTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCCCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGCATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAATCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPASSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQSSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGACCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGTCCCGAGCCGGGGGTTaGAGCGCGACGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQSRAGG*SATKFH
Trigger: GTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGA...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAACCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LKPFPARPSPVQSFFILEPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...TTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR GCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR GCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTCGCTGATGGCCAGCTaGAGCATCCTGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGSLMAS*SILCTS
Trigger: AGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGA...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGGTTAAAACATGTGTGTGCAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SWLKHVCAVGSVLWVGAAIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...TGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGTTTTAACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACACAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAATCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAACCGGCTCGGGGGATTaGCCTTTCCCCAAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVTGSGD*PFPKEF
Trigger: AAACTCCTTGGGGAAAGGGCAATCCCCCGAGCCGGT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000681099.1
ENST00000681535.1
CDS-3UTR CCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGACCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LATLADGQLQHPVHLFIGPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAACTGGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QLDDRRVVRACQSPRNPRWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...GCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGATGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCAGCCTTGCGCACAGTaGAGGCCACTTTTACTACGT +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCQPCAQ*RPLLLR
Trigger: ACGTAGTAAAAGTGGCCTTCACTGTGCGCAAGGCTG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAATCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGATTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRLVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGTTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPTACRLLLERTHRDTCPWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAACTGGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: QLDDRRVVRACQSPRNPRAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...GCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: LATLADGQLQHPVHLFIGAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCCAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCQGAID*QRTPQD
Trigger: ATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTG...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGACAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGQGAID*QRTPQD
Trigger: ATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTG...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCTGCCGAAGCTCTCGCTaGAAAAAGTTCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPCRSSR*KKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGACCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTCTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGTTGAGCTCAAGAGCTTaGGACCAGCCTGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPALSSRA*DQPEQH
Trigger: ATGTTGCTCAGGCTGGTCCCAAGCTCTTGAGCTCAA...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681599.1
3UTR CAA 72 bp ATCCCATGGGAAAACATTTGGGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGAGCAGTGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: IPWENIWASSST*SWSLRRAVTMW
Trigger: CCACATGGTCACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR TCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCAAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: GPTACRLLLERTHRDTCPSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKKFTLS*KVSEPP
Trigger: AGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTT...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGCGATTAGGGTTGGGATGATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RKLIHFQAQMSGAIRVGMIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...CATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGTTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQLVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAEPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGEPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGTGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACACAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTTGGGCCAGGTGTCTTaGGTACTCATTCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGLGQVS*VLILSG
Trigger: GCCAGAGAGAATGAGTACTCAAGACACCTGGCCCAA...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATCCAAAGTATCATCTaGGACAAGGCAAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPIQSII*DKASPF
Trigger: GAAGGGACTTGCCTTGTCTCAGATGATACTTTGGAT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAATCAGGTCCCGTCAATaGCAACAGACAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKIRSRQ*QQTAED
Trigger: ATCCTCGGCTGTCTGTTGGCATTGACGGGACCTGAT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTCGCTGATGGCCAGCTaGAGCATCCTGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFSLMAS*SILCTS
Trigger: AGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTCGCTGATGGCCAGCTaGAGCATCCTGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCSLMAS*SILCTS
Trigger: AGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGA...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAALPKS*LVSGLC
Trigger: ACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGC...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRALPKS*LVSGLC
Trigger: ACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCATCTTCCTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSSSSTAVDGRRWEEVMCFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...GCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGAAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGAACAGACCCCAGAGTTaGTCTCCACCCGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMNRPQS*SPPGLG
Trigger: TCCCAGGCCGGGTGGAGACCAACTCTGGGGTCTGTT...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGCGATTAGGGTTGGGATGAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: RKLIHFQAQMSGAIRVGMKRSCA*VAGAME
Trigger: CTCCATGGCACCTGCCACCCATGCACATGACCTCTT...CATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCGGATGCACTAATGCTTaGTTGTTGTCACTGAACCGG +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPGCTNA*LLSLNR
Trigger: CCGGTTCAGTGACAACAACCAAGCATTAGTGCATCC...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATCGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTATGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ERTHRDTCPRAVPQTHTFSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...AAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGCCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACCTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTATGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGATTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGLELGS*RTSWVT
Trigger: AGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAA...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCAGCCTTGCGCACAGTaGAGGCCACTTTTACTACGT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSQPCAQ*RPLLLR
Trigger: ACGTAGTAAAAGTGGCCTTCACTGTGCGCAAGGCTG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACACACCAAGCTTCACTGTaGTTTCATAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTHQASL*FHNAQP
Trigger: AGGCTGGGCGTTATGAAATCACAGTGAAGCTTGGTG...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCTGGTTAAAACATGTGTGTGCAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAGTAAATGCTCACGCCTaGAGTGGACACATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: SWLKHVCAVGSVLWVGAAVNAHA*SGHIAF
Trigger: GAACGCAATGTGTCCACTTCAGGCGTGAGCATTTAC...TGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGTTTTAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCCCAGTAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: QIVLCRLAQTIPGEALPSKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...ACTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCCATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAATGAGACACCAGTACTCTCTTCTTCTTGAGGGCCGAGCTCATGAATGGACACCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: QMRHQYSLLLEGRAHEWTPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...TGTCCATTCATGAGCTCGGCCCTCAAGAAGAAGAGAGTACTGGTGTCTCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCAGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GPTACRLLLERTHRDTCPAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: SMEAASRMQGESQEHLESTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...ACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVEPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCTATATTGAATTTCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: FYIEFHAKVACGRYGQGAPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGAAATTCAATATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGCCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGTGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ERTHRDTCPRAVPQTHTFWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...AAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTGAGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRAELMNGQGVIVLISQGPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...TCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSLSSAG*NRLPKD
Trigger: GTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: RAELMNGQGVIVLISQGHALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...ATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGACTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRLFICT*RSSRWK
Trigger: TTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAG...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGACTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGAGGACAAATGATGACTaGGAAAGACTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERRTNDD*ERLRSG
Trigger: GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCT...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGCAGGGCTTGGTCTCTaGCAATTTTCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCAGLGL*QFSRNM
Trigger: CATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGCGATTAGGGTTGGGATaGACCTTCTTCATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERRLGLG*TFFILE
Trigger: TTCCAGGATGAAGAAGGTGCATCCCAACCCTAATCG...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555330.5
CDS-3UTR GCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCCAGGCTGCTTTTGCTaGTCTGCCTCACTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHPGCFC*SASLVC
Trigger: ACAGACCAGTGAGGCAGAGCAGCAAAAGCAGCCTGG...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR GCA 90 bp CTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGGTTCCAGGCTGCTTTTaGTGCTCTGCCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: LVCSEYPQLLACRVVVNEVPGCF*CSASLV
Trigger: GACCAGTGAGGCAGAGCAGCAAAAGCAGCCTGGAAC...CTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGTCTCCACCCGGCCTaGGAACCGGCTCGGGGGATT +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLGLHPA*EPARGI
Trigger: AATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACC...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIPPPLS*EGAAAL
Trigger: GAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGG...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: SMEAASRMQGESQEHLESSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...ACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAACAGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: NHSRRGPPQSRASSSWKTGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...TGTTTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGGWQVP*SAATVG
Trigger: ACCAACTGTAGCAGCACTCCATGGCACCTGCCACCC...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCKRSCA*VAGAME
Trigger: CTCCATGGCACCTGCCACCCATGCACATGACCTCTT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFKRSCA*VAGAME
Trigger: CTCCATGGCACCTGCCACCCATGCACATGACCTCTT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGCSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCCTGGCCCTTTCACCTaGCCTGACGAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WYQIVLCRLAQTIPGEALPGPFT*PDESAA
Trigger: TGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGG...GAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGGCTGCTCTGCCTCACTaGTCTGTTCGGAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMAALPH*SVRSIH
Trigger: GTGGATACTCCGAACAGACCAGTGAGGCAGAGCAGC...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCTTCCAACTTCCACATaGAAGAAAAACGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQLPTST*KKNATR
Trigger: CCTTGTGGCGTTTTTCTTTCATGTGGAAGTTGGAAG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCTTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGLELGS*RTSWVT
Trigger: AGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAA...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGCACCAAGCTTCACTGTaGTTTCATAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRHQASL*FHNAQP
Trigger: AGGCTGGGCGTTATGAAATCACAGTGAAGCTTGGTG...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCACCAAGCTTCACTGTaGTTTCATAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQHQASL*FHNAQP
Trigger: AGGCTGGGCGTTATGAAATCACAGTGAAGCTTGGTG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCTGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGT +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCNRVKS*LVVSNS
Trigger: ACTATTTGATACCACCAATCAGCTCTTCACCCGGTT...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCTTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLREPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCTCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGSSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAACCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCLSSAG*NRLPKD
Trigger: GTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAG...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGATCAGGTCCCGTCAATaGCAACAGACAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRIRSRQ*QQTAED
Trigger: ATCCTCGGCTGTCTGTTGGCATTGACGGGACCTGAT...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSREADYT*GKLKEE
Trigger: TTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDEADYT*GKLKEE
Trigger: TTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTC...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTAATCCCAGGAGACTTTaGAAGACCGGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCNPRRL*KTGDPG
Trigger: ACCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATAATCCCAGGAGACTTTaGAAGACCGGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYNPRRL*KTGDPG
Trigger: ACCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATT...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: PQSKCSRLKWTHCVRRYSSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...AGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRTFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 4 (lower is better)
Translates to: LATLADGQLQHPVHLFIGTFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACCAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGTTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTALPKS*LVSGLC
Trigger: ACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGC...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAACAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTATTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAGCAGGGCTTGGTCTCTaGCAATTTTCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTAGLGL*QFSRNM
Trigger: CATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGC...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACGGTCTCCACCCGGCCTaGGAACCGGCTCGGGGGATT +
Preference number: 4 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNGLHPA*EPARGI
Trigger: AATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACC...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNPPPLS*EGAAAL
Trigger: GAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGG...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCCCACTTTTACTACGTTaGAATTGGGCTCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCPLLLR*NWAPEG
Trigger: TCCTTCAGGAGCCCAATTCCAACGTAGTAAAAGTGG...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: QPRECRVSRKNTWKVCLLSRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...CAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGTGCCGAAGCTCTCGCTaGAAAAAGTTCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRCRSSR*KKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CRLAQTIPGEALPSPELLCSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...AAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR CCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGTGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAATGAGACACCAGTACTCTCTTCTTCTTGAGGGCCGAGCTCATGAATGGACACATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QMRHQYSLLLEGRAHEWTHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...TGTCCATTCATGAGCTCGGCCCTCAAGAAGAAGAGAGTACTGGTGTCTCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: RMQGESQEHLESLPVGCYKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...GTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLRSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGT +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGNRVKS*LVVSNS
Trigger: ACTATTTGATACCACCAATCAGCTCTTCACCCGGTT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCTGAGATGGAGAAATTCCGAGTGGCTTTCAGAGACAGAGCCAAACATCACAAACCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: SEMEKFRVAFRDRAKHHKPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...TTTGTGATGTTTGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAACCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACATTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGATTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: PQSKCSRLKWTHCVRRYSPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...AGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTTGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: LVCSEYPQLLACRVVVNEAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...CTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACTCCCGAGCCGGGGGTTaGAGCGCGACGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNSRAGG*SATKFH
Trigger: GTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGA...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCATCCCGAGCCGGGGGTTaGAGCGCGACGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKASRAGG*SATKFH
Trigger: GTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGA...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGATCAGGTCCCGTCAATaGCAACAGACAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMIRSRQ*QQTAED
Trigger: ATCCTCGGCTGTCTGTTGGCATTGACGGGACCTGAT...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +