RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AREL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000119682

Ensembl transcript IDs: ENST00000356357.9, ENST00000469797.5, ENST00000481010.6, ENST00000553279.5, ENST00000554070.1, ENST00000554525.1, ENST00000555249.1, ENST00000555330.5, ENST00000556202.5, ENST00000556327.5, ENST00000556589.5, ENST00000556860.1, ENST00000557401.5, ENST00000557688.1, ENST00000680030.1, ENST00000681099.1, ENST00000681535.1, ENST00000681599.1

Found 1465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGAGTCTTCATCTTCCTCGTCAACAGCAGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATGGGTGGCAGGTGCCATGGAGTGCTG +
Preference number: 1 (lower is better)
Translates to: GESSSSSSTAVDGRR*EEVMCMGGRCHGVL
Trigger: CAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGAAGATGAAGACTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 90 bp CAGTCCTTAGAGGCAGTCCAGTGCCATGGCCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCCCTC +
Preference number: 1 (lower is better)
Translates to: QSLEAVQCHGLCLPL*SGTAPMGHLLSVPL
Trigger: GAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCCATGGCACTGGACTGCCTCTAAGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 90 bp TCCTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCATGGAGTGCTGCTACAGTTGGTAGCA +
Preference number: 1 (lower is better)
Translates to: SSSTAVDGRRWEEVM*MGGRCHGVLLQLVA
Trigger: TGCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 90 bp CGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCCCTCTCTCCTaGCTCCTGATGAGAAGAGGCAATCACCCCACCCATGAGAAGGAC +
Preference number: 1 (lower is better)
Translates to: RDCSYGPPPICPPLS*LLMRRGNHPTHEKD
Trigger: GTCCTTCTCATGGGTGGGGTGATTGCCTCTTCTCATCAGGAGCCAGGAGAGAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp AGTGCCATGGCCTATGCCTACCATTGTGCAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCCCCCTCTCTCCTGGCTCCTGATGAG +
Preference number: 1 (lower is better)
Translates to: SAMAYAYHCAAGLLL*ATSYLSPSLLAPDE
Trigger: CTCATCAGGAGCCAGGAGAGAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCCATGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp CAGCACCTTGTCCTGGTCCCTGAGGAGAGCAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACC +
Preference number: 1 (lower is better)
Translates to: QHLVLVPEESSDHVA*RILGYRDPDAGSRT
Trigger: GGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACATGGTCACTGCTCTCCTCAGGGACCAGGACAAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp GTAACTTGCGCCCAGAAGCTCCAGAGAGCATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCG +
Preference number: 1 (lower is better)
Translates to: VTCAQKLQRAWEPTG*QESGQSMPKPSQPS
Trigger: CGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCATGCTCTCTGGAGCTTCTGGGCGCAAGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 90 bp AGAGGGCGGCAAAGCCTCCAGGTGGTAGCTGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCAACTCCTCCTGGGTCAGACTGGAAA +
Preference number: 1 (lower is better)
Translates to: RGRQSLQVVAERSLL*TEVAEPTPPGSDWK
Trigger: TTTCCAGTCTGACCCAGGAGGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGGCTTTGCCGCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 90 bp GACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCAT +
Preference number: 1 (lower is better)
Translates to: DRRVVRACQSPRNPR*WPAAASCAPLHRSH
Trigger: ATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR CCA 90 bp GTCTGTAACTTGCGCCCAGAAGCTCCAGAGAGCATGGGAGCCAACTaGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACC +
Preference number: 1 (lower is better)
Translates to: VCNLRPEAPESMGAN*MTGEWSEHAKALAT
Trigger: GGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCATGCTCTCTGGAGCTTCTGGGCGCAAGTTACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 90 bp TTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACCTGTCCAAGAAAGAGA +
Preference number: 1 (lower is better)
Translates to: LPTSRPANSYIFRRR*AGRLGLGCTCPRKR
Trigger: TCTCTTTCTTGGACAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR GCA 90 bp GAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCA +
Preference number: 1 (lower is better)
Translates to: EGLFLMIPANRRAQT*FQEAKALPKSCLVS
Trigger: TGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp AACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCTGCTACAGTTGGTAGCATTATAAAG +
Preference number: 1 (lower is better)
Translates to: NSSGWPALGRGHVHG*QVPWSAATVGSIIK
Trigger: CTTTATAATGCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp CCCTCTCTCCTGGCTCCTGATGAGAAGAGGCAATCACCCCACCCATaGGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAA +
Preference number: 1 (lower is better)
Translates to: PSLLAPDEKRQSPHP*EGLKYQSGQVVRAK
Trigger: TTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTGCCTCTTCTCATCAGGAGCCAGGAGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp TCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGAC +
Preference number: 1 (lower is better)
Translates to: SWGIETLMLDPGPQG*VRSAPMCQERTNDD
Trigger: GTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp TTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACTAATGCTTGGTTGTTG +
Preference number: 1 (lower is better)
Translates to: LPTSRPANSYIFRRR*AGRLGLGCTNAWLL
Trigger: CAACAACCAAGCATTAGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp CAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTC +
Preference number: 1 (lower is better)
Translates to: QHPCAKKGQMMTAKD*GQAGTVAAQEGLFL
Trigger: GAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp GCTGCTAGAATGTTCCTCTCCTTACAGCTGAGCTCCACAGGAGGTTaGATGCCATCATCCACCACCAGTGTGAGCAGCTTATGGACAGGG +
Preference number: 1 (lower is better)
Translates to: AARMFLSLQLSSTGG*MPSSTTSVSSLWTG
Trigger: CCCTGTCCATAAGCTGCTCACACTGGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGAACATTCTAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 90 bp CCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGAT +
Preference number: 1 (lower is better)
Translates to: PTACRLLLERTHRDT*PRAVPQTHTFSGAD
Trigger: ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
3UTR CCA 90 bp TGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGTAGCATTATAAAGATAAGCCTCAAA +
Preference number: 1 (lower is better)
Translates to: WPALGRGHVHGWQVP*SAATVGSIIKISLK
Trigger: TTTGAGGCTTATCTTTATAATGCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp ATATTTACATCATCAGCTGCAACTGCCTGGCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAA +
Preference number: 1 (lower is better)
Translates to: IFTSSAATAWPFHLA*RICSRAWSLPIFQK
Trigger: TTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 90 bp TTTAAGGGTCTCCACACCAGTTTCCCAACAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTGAGATCTTCAAAGGACCAAATAAAT +
Preference number: 1 (lower is better)
Translates to: FKGLHTSFPTGLSPV*HLPQLLRSSKDQIN
Trigger: ATTTATTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTGTGGAGACCCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp ATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTG +
Preference number: 1 (lower is better)
Translates to: ISSLQASHMPRHAPL*RLQLSYPSYSSVYL
Trigger: CAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp ACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTaGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAA +
Preference number: 1 (lower is better)
Translates to: TGLAKTINSISRISL*KAAGGENSEKRLPK
Trigger: TTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp ACAAAATATTTACATCATCAGCTGCAACTGCCTGGCCCTTTCACCTaGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCC +
Preference number: 1 (lower is better)
Translates to: TKYLHHQLQLPGPFT*PDESAAGLGLCQFS
Trigger: GGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAATATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp GAACCTAATAAGCTTCCTCCCTCCTTAGTTCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTG +
Preference number: 1 (lower is better)
Translates to: EPNKLPPSLVLLPDN*WSKGEYRGWQVFTV
Trigger: CACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAACTAAGGAGGGAGGAAGCTTATTAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 90 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTC +
Preference number: 1 (lower is better)
Translates to: QPRECRVSRKNTWKV*LLDVTDFSNETPVL
Trigger: GAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CCA 90 bp GCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACA +
Preference number: 1 (lower is better)
Translates to: AWKQPRECRVSRKNT*KVCLLDVTDFSNET
Trigger: TGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR TCA 90 bp ATTTTGTTCCTGGACACACTCGGAAGGTGTAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCTTCACTGAGAATTGCTTTGGTGACA +
Preference number: 1 (lower is better)
Translates to: ILFLDTLGRCKGARG*SSGRTPSLRIALVT
Trigger: TGTCACCAAAGCAATTCTCAGTGAAGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTTACACCTTCCGAGTGTGTCCAGGAACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 90 bp TGCTCTGCCTCACTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTaGAGGGTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTAGC +
Preference number: 1 (lower is better)
Translates to: CSASLVCSEYPQLLA*RVVVNETINTKAPS
Trigger: GCTAGGAGCTTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAGTGAGGCAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR CCA 90 bp ATGACCTTTTCTCTGAAATGCCATGAGCCACCAACAACTACTGCATaGGCTTTGAAGTCAGACACACTGATGTCTCCAGTCCCACACATC +
Preference number: 1 (lower is better)
Translates to: MTFSLKCHEPPTTTA*ALKSDTLMSPVPHI
Trigger: GATGTGTGGGACTGGAGACATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 90 bp AATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGA +
Preference number: 1 (lower is better)
Translates to: NLQQGLVSANFPETC*HSPRYSLMSGLLQR
Trigger: TCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp GATCATGCAAAGGAGGAAGTCTCTTCTGACTTGGTGTCTTCTTCATaGATGTTTGGGCCAGGTGTCTTGAGTACTCATTCTCTCTGGCCT +
Preference number: 1 (lower is better)
Translates to: DHAKEEVSSDLVSSS*MFGPGVLSTHSLWP
Trigger: AGGCCAGAGAGAATGAGTACTCAAGACACCTGGCCCAAACATTCATGAAGAAGACACCAAGTCAGAAGAGACTTCCTCCTTTGCATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR CCA 90 bp TTCCAACAAGGCATGTCTGCTGACCTTCAGGGTGACTTTGGAATGTaGTCTTTTCATATGTACCTGCCGAAGCTCTCGCTGGAAAAAGTT +
Preference number: 1 (lower is better)
Translates to: FQQGMSADLQGDFGM*SFHMYLPKLSLEKV
Trigger: AACTTTTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAGCAGACATGCCTTGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp ATGGAATTGTTGGTGGGATTATCATACTCATCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCACAGGTCAATACAAGAGTAGAAAAG +
Preference number: 1 (lower is better)
Translates to: MELLVGLSYSSRGTI*RVCGCPQVNTRVEK
Trigger: CTTTTCTACTCTTGTATTGACCTGTGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCCACCAACAATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp CTTCTGACTTGGTGTCTTCTTCATGAATGTTTGGGCCAGGTGTCTTaGGTACTCATTCTCTCTGGCCTGCCTATTTCCCTTGTTCTTTTT +
Preference number: 1 (lower is better)
Translates to: LLTWCLLHECLGQVS*VLILSGLPISLVLF
Trigger: AAAAAGAACAAGGGAAATAGGCAGGCCAGAGAGAATGAGTACTCAAGACACCTGGCCCAAACATTCATGAAGAAGACACCAAGTCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR TCA 90 bp GGATGCACTAATGCTTGGTTGTTGTCACTGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCAT +
Preference number: 1 (lower is better)
Translates to: GCTNAWLLSLNRVKS*LVVSNSALQISSNH
Trigger: ATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCACCAATCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCATTAGTGCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 90 bp CTTCATCCTGGAAAACAACCTCAAAGTTCTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTTTCAGAGACAGAGCCAAACATCACA +
Preference number: 1 (lower is better)
Translates to: LHPGKQPQSSCSNLR*RNSEWLSETEPNIT
Trigger: TGTGATGTTTGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCCAGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR CCA 90 bp CTTCATCCTGGAAAACAACCTCAAAGTTCTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTTTCAGAGACGATTCCAACAAGGCAT +
Preference number: 1 (lower is better)
Translates to: LHPGKQPQSSCSNLR*RNSEWLSETIPTRH
Trigger: ATGCCTTGTTGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCCAGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 90 bp TCTTCAAAGGACCAAATAAATGATAGCAGCATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCT +
Preference number: 1 (lower is better)
Translates to: SSKDQINDSSMVLFS*QNEELSLHTMPKWP
Trigger: AGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGCTGCTATCATTTATTTGGTCCTTTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 90 bp CTGGTTGGGTTGCAATGGTGCCTAAGATGCTCTGAAAAAGTGCTATaGCTAGAGCTTAAAATGACAGGTCTAGCCAAGACAATCAACTCA +
Preference number: 1 (lower is better)
Translates to: LVGLQWCLRCSEKVL*LELKMTGLAKTINS
Trigger: TGAGTTGATTGTCTTGGCTAGACCTGTCATTTTAAGCTCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp TGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATGGAATTGTTaGTGGGATTATCATACTCATCTCGGGGTACTATTTGAAGGGTGT +
Preference number: 1 (lower is better)
Translates to: WTRCNCAHLSRTWNC*WDYHTHLGVLFEGC
Trigger: ACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCCACCAACAATTCCATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR TCA 90 bp GAAAGAGATAATGCTTGGTTGTTGTCACTGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCAT +
Preference number: 1 (lower is better)
Translates to: ERDNAWLLSLNRVKS*LVVSNSALQISSNH
Trigger: ATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCACCAATCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCATTATCTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR GCA 90 bp CTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAAC +
Preference number: 1 (lower is better)
Translates to: LVLAIKMACNILRVD*PIGNGSLQQSLLKN
Trigger: GTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp GCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATaGAATTGTTGGTGGGATTATCATACTCATCTCGGGGTACTATTT +
Preference number: 1 (lower is better)
Translates to: AHEWTRCNCAHLSRT*NCWWDYHTHLGVLF
Trigger: AAATAGTACCCCGAGATGAGTATGATAATCCCACCAACAATTCCATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR GCA 90 bp CTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAGTCAATGAG +
Preference number: 1 (lower is better)
Translates to: LVIFSELTAPLGMVA*SKAFLKTQIWEVNE
Trigger: CTCATTGACTTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 90 bp CATTCAGGCCTTTTAGGAAATGTTCCACCTCCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCAGCAAATTTAAATAGAAGATTTTAT +
Preference number: 1 (lower is better)
Translates to: HSGLLGNVPPPLSLD*PADIGPANLNRRFY
Trigger: ATAAAATCTTCTATTTAAATTTGCTGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTGGAACATTTCCTAAAAGGCCTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGCCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 2 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 2 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp CAACTGGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: QLDDRRVVRACQSPRNPRGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...GCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 2 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CAACTGGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 2 (lower is better)
Translates to: QLDDRRVVRACQSPRNPRGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...GCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 2 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 2 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGACGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGACAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CAA 90 bp CCGGTACATATCCCATGGGAAAACATTTGGGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGAGCAGTGACCATGTGGCATGGAGGA +
Preference number: 2 (lower is better)
Translates to: PVHIPWENIWASSST*SWSLRRAVTMWHGG
Trigger: TCCTCCATGCCACATGGTCACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 2 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCTTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 2 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPLVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: KASVVSKPAICLGMPHSGWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: LRHASRRPRHCQSPALFQIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLILRVD*PIGNGS
Trigger: GCTACCATTCCCAATGGGGCAGTCAACTCTGAGAAT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCACTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATTCGCATTGGTGACTaGAGTTTGAGCTCCACCTGT +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPIRIGD*SLSSTC
Trigger: ACAGGTGGAGCTCAAACTCCAGTCACCAATGCGAAT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 2 (lower is better)
Translates to: GLTNLQQGLVSANFPETCTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 2 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 2 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTCAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCATGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: LRHASRRPRHCQSPALFQRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCACCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGACGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 2 (lower is better)
Translates to: GLTNLQQGLVSANFPETCVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGGTAGGGAGGCACAGCTaGTTAAAACATGTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAVGRHS*LKHVCA
Trigger: TGCACACACATGTTTTAACCAGCTGTGCCTCCCTAC...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: RSAPMCQERTNDDCERLRRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 2 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR TCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTTCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: ECRVSRKNTWKVCLLDVTSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...AGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: RSAPMCQERTNDDCERLRIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGALCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 2 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 2 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 2 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 2 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 2 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 2 (lower is better)
Translates to: GLTNLQQGLVSANFPETCWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 2 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAACTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 2 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGCCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 2 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPALLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 2 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 2 (lower is better)
Translates to: TSVPITNSGKSISSLQASPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...GCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 2 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGACCTTCAGGGTGACTTTGGAATGTGGTCTTTTCATATGTACCTGCCGAAGCTCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LTFRVTLECGLFICTCRSSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...GCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 2 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 2 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 2 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: GPTACRLLLERTHRDTCPHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCTGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 2 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCCGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 2 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 2 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 2 (lower is better)
Translates to: KASVVSKPAICLGMPHSGELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAACAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 2 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: TCPRAVPQTHTFSGADERQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR GCA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATCGATTAGGGTTGGGATaGACCTGTCCAAGAAAGAGA +
Preference number: 2 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADRLGLG*TCPRKR
Trigger: TCTCTTTCTTGGACAGGTGCATCCCAACCCTAATCG...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR-3UTR GCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 2 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTTFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: KASVVSKPAICLGMPHSGACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 2 (lower is better)
Translates to: HQFPNRAEPRVPSPSATERIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTTGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 2 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 2 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCCCAGTTGGAGAAATTCCGAGTaGCTTTCAGAGACAGAGCCA +
Preference number: 2 (lower is better)
Translates to: QIVLCRLAQTIPGEALPSWRNSE*LSETEP
Trigger: TGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCA...ACTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR-3UTR CCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACCCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 2 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 2 (lower is better)
Translates to: AQLTYHAKVACGRYGQGASRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp ACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGT +
Preference number: 2 (lower is better)
Translates to: TSVPITNSGKSISSLQASGWQVP*SAATVG
Trigger: ACCAACTGTAGCAGCACTCCATGGCACCTGCCACCC...GCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CAA 90 bp AGAGACGATTCCAACAAGGCATGTCTGCTGACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATATGTACCTGCCGAAGCTCTCGCTGG +
Preference number: 2 (lower is better)
Translates to: RDDSNKACLLTFRVT*ECGLFICTCRSSRW
Trigger: CCAGCGAGAGCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAGCAGACATGCCTTGTTGGAATCGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 2 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACTCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 2 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHSSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 2 (lower is better)
Translates to: FLCLSAAREHQAERESGILENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAACAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 2 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTACTTGCTGGTTTTGGCAATAAAGATG +
Preference number: 2 (lower is better)
Translates to: LRHASRRPRHCQSPA*FQDSVYLLVLAIKM
Trigger: CATCTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 90 bp GTCATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGTGAAGCGAGCTCGGACCAACTGCTT +
Preference number: 2 (lower is better)
Translates to: VICFKVLVMHTQSYD*GQERAGEASSDQLL
Trigger: AAGCAGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
3UTR CAA 90 bp TTTTCTCTGAAATGCCATGAGCCACCAACAACTACTGCATGGGCTTaGAAGTCAGACACACTGATGTCTCCAGTCCCACACATCAGCAGC +
Preference number: 2 (lower is better)
Translates to: FSLKCHEPPTTTAWA*KSDTLMSPVPHISS
Trigger: GCTGCTGATGTGTGGGACTGGAGACATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: TSVPITNSGKSISSLQASQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...GCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 2 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGC +
Preference number: 2 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGILRVD*PIGNGS
Trigger: GCTACCATTCCCAATGGGGCAGTCAACTCTGAGAAT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 2 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTGCAGGGCTTGGTCTCTaGCAATTTTCCAGAAACATG +
Preference number: 2 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCAGLGL*QFSRNM
Trigger: CATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGC...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: RSAPMCQERTNDDCERLRTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGTTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 2 (lower is better)
Translates to: LRHASRRPRHCQSPALFQLFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCACTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 2 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: SHLFDILYLFPTLASMKAIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 2 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 2 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCTTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 2 (lower is better)
Translates to: APMCQERTNDDCERLRSGLFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGTTCTTCATGAATGTTTaGGCCAGGTGTCTTGAGTAC +
Preference number: 2 (lower is better)
Translates to: LVCSEYPQLLACRVVVNEFFMNV*ARCLEY
Trigger: GTACTCAAGACACCTGGCCCAAACATTCATGAAGAA...CTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAATGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGAGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 2 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CAA 90 bp CGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: RECRVSRKNTWKVCL*DVTDFSNETPVLSS
Trigger: AGAAGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: QAGHTSVPITNSGKSISSMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 2 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 2 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCATTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp TATATTGAATTTCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGGTATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: YIEFHAKVACGRYGQGAGMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...ACCTGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGAAATTCAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR GCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 2 (lower is better)
Translates to: KASVVSKPAICLGMPHSGILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 2 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: WYQIVLCRLAQTIPGEALQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...GAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR CCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 2 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 90 bp TGCCAAAGTCCTGCCTTGTTTCAGGACTCTGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCC +
Preference number: 2 (lower is better)
Translates to: CQSPALFQDSVYLLV*AIKMACNILRVDCP
Trigger: GGGGCAGTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 90 bp CATGGAATTGTTGGTGGGATTATCATACTCATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCCACAGGTCAATACAAGAGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: HGIVGGIIILISGYY*KGVRLPTGQYKSRK
Trigger: TTTTCTACTCTTGTATTGACCTGTGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCCACCAACAATTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGACCTTCAGGGTGACTTTGGAATGTGGTCTTTTCATATGTACCTGCCGAAGCCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 2 (lower is better)
Translates to: LTFRVTLECGLFICTCRSLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...GCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACTGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 2 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR GCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWELCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 2 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: VYLLVLAIKMACNILRVDIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TATAAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: YKDKPQSKCSRLKWTHCVKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...AACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGAGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLETQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: VYLLVLAIKMACNILRVDRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCACCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 2 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 2 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR TCA 90 bp CTGCTAGCTTGCAGGGTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTAGCTTGGTGTCTTCTTCATaGATGTTTGGGCCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: LLACRVVVNETINTKAPSLVSSS*MFGPGV
Trigger: GACACCTGGCCCAAACATTCATGAAGAAGACACCAA...GCTAGGAGCTTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR TCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 2 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAATTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWELVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTGGGAAGAGAGGATCATaGAAAGGAGGAAGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: QLLACRVVVNETINTKAPGKRGS*KGGSLF
Trigger: GAAGAGACTTCCTCCTTTGCATGATCCTCTCTTCCC...AGGAGCTTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 2 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAACTCTCTCATCTCTTTaGCATATTGTACCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPTLSSL*HIVPFP
Trigger: GGGAAAAGGTACAATATGTCAAAGAGATGAGAGAGT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SHLFDILYLFPTLASMKAMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 2 (lower is better)
Translates to: GACGIFWLMVMCVRISGYILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAAGGACAAATGATGACTaGGAAAGACTGAGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWERTNDD*ERLRSG
Trigger: GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCT...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTTCTAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 2 (lower is better)
Translates to: QSKCSRLKWTHCVRRYSSNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR TCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAGGACAAATGATGACTaGGAAAGACTGAGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: VYLLVLAIKMACNILRVDRTNDD*ERLRSG
Trigger: GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp GTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: VVVNETINTKAPSIWEERACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...CCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATTCACAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CCA 90 bp ATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCCAGGAATGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: ICFKVLVMHTQSYDLGQECSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...TTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR CCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR CAA 90 bp GTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATaGCTGGCATACTATTCTTACTGTTCTAATCTTTTGCTACAAAAT +
Preference number: 2 (lower is better)
Translates to: VLVLPENTKQRENQG*LAYYSYCSNLLLQN
Trigger: ATTTTGTAGCAAAAGATTAGAACAGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR TCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 2 (lower is better)
Translates to: VYLLVLAIKMACNILRVDRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: SHLFDILYLFPTLASMKAVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR GCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 2 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 2 (lower is better)
Translates to: KMACNILRVDCPIGNGSLRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIICSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CCA 90 bp GCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACATCTCTCAAGGACATaGAATTGTTGGTGGGATTAT +
Preference number: 2 (lower is better)
Translates to: ARTPGKSACWMLLISQMRHLSRT*NCWWDY
Trigger: ATAATCCCACCAACAATTCCATGTCCTTGAGAGATG...TCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR CCA 90 bp GCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGAGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 2 (lower is better)
Translates to: ARTPGKSACWMLLISQMRGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...TCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR GCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: PLGMVACSKAFLKTQIWELGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CCA 90 bp AATGAGACAATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCATGCAAAGTACTCATTCTCTCTaGCCTGCCTATTTCCCTTGT +
Preference number: 2 (lower is better)
Translates to: NETINTKAPSIWEERIMQSTHSL*PAYFPC
Trigger: ACAAGGGAAATAGGCAGGCCAGAGAGAATGAGTACT...TTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR GCA 72 bp ACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCATGGAGTGCTGCTACAG +
Preference number: 3 (lower is better)
Translates to: TAVDGRRWEEVM*MGGRCHGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 72 bp GGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCTGCTACAGTTGGTAGC +
Preference number: 3 (lower is better)
Translates to: GWPALGRGHVHG*QVPWSAATVGS
Trigger: GCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 72 bp CAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAGTGCTGCTACAGTTGG +
Preference number: 3 (lower is better)
Translates to: QWMAGAGKRSCA*VAGAMECCYSW
Trigger: CCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 72 bp GTGCCATGGCCTATGCCTACCATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCTATCTGTCCCCCTCTC +
Preference number: 3 (lower is better)
Translates to: VPWPMPTIVQRD*SYGPPPICPPL
Trigger: GAGAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCCATGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp GCCTATGCCTACCATTGTGCAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCCCCCTCTCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: AYAYHCAAGLLL*ATSYLSPSLLA
Trigger: AGCCAGGAGAGAGGGGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp TCATCTTCCTCGTCAACAGCAGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATGGGTGGCAGGTGCCAT +
Preference number: 3 (lower is better)
Translates to: SSSSSTAVDGRR*EEVMCMGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGAAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCACCTCCTCTTTCACTaGACTGGCCAGCCGATATTG +
Preference number: 3 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCHLLFH*TGQPIL
Trigger: CAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTG...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 72 bp GTAGGCAGCGTGCTATGGGTCGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCGGCAAAGCCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: VGSVLWVGAAII*NEGQRAAKPPG
Trigger: ACCTGGAGGCTTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR CCA 72 bp GTCCTGGTCCCTGAGGAGAGCAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGAGACCCTGATGCTGGA +
Preference number: 3 (lower is better)
Translates to: VLVPEESSDHVA*RILGYRDPDAG
Trigger: TCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACATGGTCACTGCTCTCCTCAGGGACCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp TTGCGCCCAGAAGCTCCAGAGAGCATGGGAGCCAACTaGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: LRPEAPESMGAN*MTGEWSEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCATGCTCTCTGGAGCTTCTGGGCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 3 (lower is better)
Translates to: KASVVSKPAICLGMPHSGGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 72 bp TCATCAGCTGCAACTGCCTGGCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCTTGGTCTCTGCCAATT +
Preference number: 3 (lower is better)
Translates to: SSAATAWPFHLA*RICSRAWSLPI
Trigger: AATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 72 bp AGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACCTGTCCA +
Preference number: 3 (lower is better)
Translates to: SRPANSYIFRRR*AGRLGLGCTCP
Trigger: TGGACAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR TCA 72 bp CAAAGCCTCCAGGTGGTAGCTGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCAACTCCTCCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: QSLQVVAERSLL*TEVAEPTPPGS
Trigger: TGACCCAGGAGGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR GCA 72 bp CTCCACACCAGTTTCCCAACAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTGAGATCTTCAAAGGAC +
Preference number: 3 (lower is better)
Translates to: LHTSFPTGLSPV*HLPQLLRSSKD
Trigger: GTCCTTTGAAGATCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 72 bp TTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGC +
Preference number: 3 (lower is better)
Translates to: FLMIPANRRAQT*FQEAKALPKSC
Trigger: GCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCTGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 3 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPCQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGCAGCTCAGGAGGGCTaGTTCCTCATGATCCCTGCG +
Preference number: 3 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFAAQEG*FLMIPA
Trigger: CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 3 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCAATCTGCAGCAGGGCTaGGTCTCTGCCAATTTTCCA +
Preference number: 3 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPNLQQG*VSANFP
Trigger: TGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGATTGGTGACTGGAGTTaGAGCTCCACCTGTCATGAG +
Preference number: 3 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAIGDWS*SSTCHE
Trigger: CTCATGACAGGTGGAGCTCAAACTCCAGTCACCAAT...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR GCA 72 bp CAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCTGGAGGCTACAGCTCA +
Preference number: 3 (lower is better)
Translates to: QGKASVVSKPAI*LGMPHSGGYSS
Trigger: TGAGCTGTAGCCTCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 3 (lower is better)
Translates to: QTQGKASVVSKPAICLGMGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 3 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAACTACTGCATGGGCTTaGAAGTCAGACACACTGATG +
Preference number: 3 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRTTAWA*KSDTLM
Trigger: CATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 72 bp AGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACTAATGCT +
Preference number: 3 (lower is better)
Translates to: SRPANSYIFRRR*AGRLGLGCTNA
Trigger: AGCATTAGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 72 bp TTCTTTTTAGCAGTCCTTAGAGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTGCAGCGGGACTGCTCC +
Preference number: 3 (lower is better)
Translates to: FFLAVLRGSPVP*PMPTIVQRDCS
Trigger: GGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCCATGGCACTGGACTGCCTCTAAGGACTGCTAAAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 3 (lower is better)
Translates to: KASVVSKPAICLGMPHSGRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 3 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp AAGCTTCCTCCCTCCTTAGTTCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: KLPPSLVLLPDN*WSKGEYRGWQV
Trigger: CACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAACTAAGGAGGGAGGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp CAGAATGAAGAGCTCAGCTTACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGCAGGGAGCAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: QNEELSLHTMPK*PVVDMGREQVR
Trigger: CCTCACCTGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTCATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp CCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATaGGAAAACATTTGGGCAAGCAGCAGCACCTTGTCC +
Preference number: 3 (lower is better)
Translates to: PRVVINLPVHIP*ENIWASSSTLS
Trigger: GGACAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp TACACCTTCTTCGGTTTCTTCACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCTTCATCTTCCTCGTCA +
Preference number: 3 (lower is better)
Translates to: YTFFGFFTFSGV*HSEGESSSSSS
Trigger: TGACGAGGAAGATGAAGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGTGAAGAAACCGAAGAAGGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGATATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: KASVVSKPAICLGMPHSGYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 3 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 3 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 3 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 3 (lower is better)
Translates to: GACGIFWLMVMCVRISGYASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 3 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: PQSKCSRLKWTHCVRRYSISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...AGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 3 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCTCACTGAGAATTGCTTaGGTGACACATAGCAGTACA +
Preference number: 3 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTSLRIA*VTHSST
Trigger: TGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGA...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGACTAATGCTTGGTTGTaGTCACTGAACCGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: LRHASRRPRHCQSPALFQTNAWL*SLNRVK
Trigger: CTTCACCCGGTTCAGTGACAACAACCAAGCATTAGT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp CCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGATCAGTGGTTATGATG +
Preference number: 3 (lower is better)
Translates to: PPDTGEHAASSG*WLCVLGSVVMM
Trigger: CATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR TCA 72 bp CTGGACACACTCGGAAGGTGTAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCTTCACTGAGAATTGCT +
Preference number: 3 (lower is better)
Translates to: LDTLGRCKGARG*SSGRTPSLRIA
Trigger: AGCAATTCTCAGTGAAGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTTACACCTTCCGAGTGTGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp ATGTTCCTCTCCTTACAGCTGAGCTCCACAGGAGGTTaGATGCCATCATCCACCACCAGTGTGAGCAGCTTA +
Preference number: 3 (lower is better)
Translates to: MFLSLQLSSTGG*MPSSTTSVSSL
Trigger: TAAGCTGCTCACACTGGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGAACAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 72 bp TGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAAACTCATACATTTTCA +
Preference number: 3 (lower is better)
Translates to: CRLLLERTHRDT*PRAVPQTHTFS
Trigger: TGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
3UTR CCA 72 bp GCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTaGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGA +
Preference number: 3 (lower is better)
Translates to: AKTINSISRISL*KAAGGENSEKR
Trigger: TCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 3 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATACAACCTCAAAGTTCTaGCTCCAATCTGAGATGGAG +
Preference number: 3 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADTTSKF*LQSEME
Trigger: CTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGT...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR-3UTR CAA 90 bp ACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATACTCAAGGACATGGAATaGTTGGTGGGATTATCATAC +
Preference number: 3 (lower is better)
Translates to: TLADGQLQHPVHLFIGVILKDME*LVGLSY
Trigger: GTATGATAATCCCACCAACAATTCCATGTCCTTGAG...TATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp TGCCGAAGCTCTCGCTGGAAAAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCTATGTTCTTATGCAGG +
Preference number: 3 (lower is better)
Translates to: CRSSRWKKFTLS*KVSEPPMFLCR
Trigger: CCTGCATAAGAACATAGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 72 bp TGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGAGCATGGGAGCCAACT +
Preference number: 3 (lower is better)
Translates to: CVLGSVVMMSVT*AQKLQRAWEPT
Trigger: AGTTGGCTCCCATGCTCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 72 bp ACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGTGTACTTGCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: TCFQEAKALPKS*LVSGLCVLAGF
Trigger: AAAACCAGCAAGTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 72 bp AATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCTaGCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAA +
Preference number: 3 (lower is better)
Translates to: NQLNLQDQSLEG*RRGEFRKATAK
Trigger: TTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCA +
Preference number: 3 (lower is better)
Translates to: QPRECRVSRKNT*KVCLLDVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CCA 72 bp CTGGGAAGAGGTCATGTGCATGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGTAGCATTATAAAGATA +
Preference number: 3 (lower is better)
Translates to: LGRGHVHGWQVP*SAATVGSIIKI
Trigger: TATCTTTATAATGCTACCAACTGTAGCAGCACTCCATGGCACCTGCCACCCATGCACATGACCTCTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 3 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 3 (lower is better)
Translates to: AQLTYHAKVACGRYGQGARENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGGAGTTGACTGCCCCATaGGGAATGGTAGCTTGCAGC +
Preference number: 3 (lower is better)
Translates to: KMACNILRVDCPIGNGSLELTAP*GMVACS
Trigger: GCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTC...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGTAATATTCTCAGAGTaGACTGCCCCATTGGGAATG +
Preference number: 3 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFVIFSE*TAPLGM
Trigger: CATTCCCAATGGGGCAGTCAACTCTGAGAATATTAC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCACAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 3 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 3 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPTQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR TCA 72 bp CAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCACTCATGTCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: QGLVSANFPETC*HSPRYSLMSGL
Trigger: GAGACCAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp AAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTTAGGATCAGTGGTTAT +
Preference number: 3 (lower is better)
Translates to: KSSRHRGACGIF*LMVMCVRISGY
Trigger: ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: QAGHTSVPITNSGKSISSYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCATCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 3 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 3 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVRENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 3 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGAAGTGGCACACAATTTaGGTCTTAGAAGGAACCACC +
Preference number: 3 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQKWHTI*VLEGTT
Trigger: GGTGGTTCCTTCTAAGACCAAAATTGTGTGCCACTT...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGCCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 3 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 3 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATA +
Preference number: 3 (lower is better)
Translates to: RSAPMCQERTNDDCERLRTFRVT*ECGLFI
Trigger: TATGAAAAGACCACATTCCAAAGTCACCCTGAAGGT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR GCA 72 bp AGGGTGACTTTGGAATGTGGTCTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAAAAGTTCACCTTGTCC +
Preference number: 3 (lower is better)
Translates to: RVTLECGLFICT*RSSRWKKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp GTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTTCTTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: VCLLDVTDFSNETPVLSSYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...AGAAGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 3 (lower is better)
Translates to: GACGIFWLMVMCVRISGYVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGTGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 3 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLCQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 3 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 3 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIITQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 3 (lower is better)
Translates to: ECRVSRKNTWKVCLLDVTKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...AGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR TCA 72 bp AGGCCTTTTAGGAAATGTTCCACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGGGCCAGCAAATTTAAA +
Preference number: 3 (lower is better)
Translates to: RPFRKCSTSSFT*LASRYWASKFK
Trigger: TTTAAATTTGCTGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTGGAACATTTCCTAAAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
3UTR GCA 72 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGATTTCTCAAATGAGACA +
Preference number: 3 (lower is better)
Translates to: ECRVSRKNTWKV*LLDVTDFSNET
Trigger: TGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR GCA 72 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTaGGTTCGACGATATTCTTCTCATCCTCACTTAGGA +
Preference number: 3 (lower is better)
Translates to: PQSKCSRLKWTH*VRRYSSHPHLG
Trigger: TCCTAAGTGAGGATGAGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CCA 72 bp GGAAAACAACCTCAAAGTTCTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTTTCAGAGACAGAGCCA +
Preference number: 3 (lower is better)
Translates to: GKQPQSSCSNLR*RNSEWLSETEP
Trigger: TGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR-3UTR CAA 90 bp ATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCATGCAAAGGAGGAAGTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: INTKAPSIWEERIMQRRKYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...CTTCCTCCTTTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CAA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 3 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 3 (lower is better)
Translates to: VYLLVLAIKMACNILRVDRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGTTTGGGCCAGGTGTCTaGAGTACTCATTCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLFGPGV*STHSLW
Trigger: CCAGAGAGAATGAGTACTCAAGACACCTGGCCCAAA...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR-3UTR CAA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTCCTGAAGTGGACACATaGCGTTCGACGATATTCTTC +
Preference number: 3 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIPEVDT*RSTIFF
Trigger: GAAGAATATCGTCGAACGCAATGTGTCCACTTCAGG...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR TCA 72 bp ATCCTGGAAAACAACCTCAAAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGTGGCTTTCAGAGACAG +
Preference number: 3 (lower is better)
Translates to: ILENNLKVLAPI*DGEIPSGFQRQ
Trigger: CTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR TCA 72 bp AATGCTTGGTTGTTGTCACTGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGTGCTTTGCAGATTAGC +
Preference number: 3 (lower is better)
Translates to: NAWLLSLNRVKS*LVVSNSALQIS
Trigger: GCTAATCTGCAAAGCACTATTTGATACCACCAATCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
3UTR TCA 72 bp ATCCTGGAAAACAACCTCAAAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGTGGCTTTCAGAGACGA +
Preference number: 3 (lower is better)
Translates to: ILENNLKVLAPI*DGEIPSGFQRR
Trigger: TCGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR CCA 72 bp TGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATaGAATTGTTGGTGGGATTATCATACTCATCTCGGG +
Preference number: 3 (lower is better)
Translates to: WTRCNCAHLSRT*NCWWDYHTHLG
Trigger: CCCGAGATGAGTATGATAATCCCACCAACAATTCCATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR CCA 72 bp GGAAAACAACCTCAAAGTTCTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTTTCAGAGACGATTCCA +
Preference number: 3 (lower is better)
Translates to: GKQPQSSCSNLR*RNSEWLSETIP
Trigger: TGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
3UTR-3UTR CAA 90 bp ACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCA +
Preference number: 3 (lower is better)
Translates to: TPGKSACWMLLISQMRHQWKVCL*DVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCA...CTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR GCA 72 bp TTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAAACACAAATTTGGGAA +
Preference number: 3 (lower is better)
Translates to: FSELTAPLGMVA*SKAFLKTQIWE
Trigger: TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR GCA 72 bp TCACTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTaGAGGGTTGTTGTGAATGAGACAATAAATACTAAA +
Preference number: 3 (lower is better)
Translates to: SLVCSEYPQLLA*RVVVNETINTK
Trigger: TTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR CCA 72 bp AAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTaGACACATTGCGTTCGACGATATTCTTCTCATCCT +
Preference number: 3 (lower is better)
Translates to: KDKPQSKCSRLK*THCVRRYSSHP
Trigger: AGGATGAGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
3UTR-3UTR CAA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 3 (lower is better)
Translates to: PLGMVACSKAFLKTQIWERENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACCAGGACTCTGTGTACTaGCTGGTTTTGGCAATAAAG +
Preference number: 3 (lower is better)
Translates to: VYLLVLAIKMACNILRVDQDSVY*LVLAIK
Trigger: CTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTG...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 3 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 3 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR-3UTR CAA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 3 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CCA 72 bp GTGAATGAGACAATAAATACTAAAGCTCCTAGCATATaGGAAGAGAGGATCATGCAAAGGAGGAAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: VNETINTKAPSI*EERIMQRRKSL
Trigger: AAGAGACTTCCTCCTTTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGGTCTCCACCCGGCCTaGGAACCGGCTCGGGGGATT +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLGLHPA*EPARGI
Trigger: AATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGCCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTGGCCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 4 (lower is better)
Translates to: LVNSSGWPALGRGHVHGWPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...CCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp AGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAACCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RLLLERTHRDTCPRAVPQPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCGCCGAGGATCACAGCTaGAGCTTTAAACGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCAEDHS*SFKRGP
Trigger: GGGCCCTCGTTTAAAGCTGCAGCTGTGATCCTCGGC...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
CDS-3UTR GCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGCAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATGCATGGGTGGCAGGTaGCATGGAGTGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPCMGGR*HGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSPPPLS*EGAAAL
Trigger: GAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: DTCPRAVPQTHTFSGADEVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATGCATGGGTGGCAGGTaGCATGGAGTGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQCMGGR*HGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGTGCATGGGTGGCAGGTaGCATGGAGTGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGCMGGR*HGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCA...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATERVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAAATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RLLLERTHRDTCPRAVPQIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLREPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LKPFPARPSPVQSFFILEGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...TTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAACCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGATCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTCCCCGAGCCGGGGGTTaGAGCGCGACGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSPRAGG*SATKFH
Trigger: GTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGG...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: ECRVSRKNTWKVCLLDVTPPPLS*EGAAAL
Trigger: GAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGG...AGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPARSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTGGCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: LVNSSGWPALGRGHVHGWHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...CCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp AGCTGGTTAAAACATGTGTGTGCAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: SWLKHVCAVGSVLWVGAAAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...TGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGTTTTAACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACCTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCCCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGCATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAATCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPASSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQSSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGACCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGTCCCGAGCCGGGGGTTaGAGCGCGACGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQSRAGG*SATKFH
Trigger: GTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGA...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAACCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LKPFPARPSPVQSFFILEPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...TTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR GCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR GCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTCGCTGATGGCCAGCTaGAGCATCCTGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGSLMAS*SILCTS
Trigger: AGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGA...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGGTTAAAACATGTGTGTGCAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SWLKHVCAVGSVLWVGAAIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...TGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGTTTTAACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACACAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAATCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: LPGPFTWPDESAAGLGLCFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...GCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAACCGGCTCGGGGGATTaGCCTTTCCCCAAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVTGSGD*PFPKEF
Trigger: AAACTCCTTGGGGAAAGGGCAATCCCCCGAGCCGGT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000681099.1
ENST00000681535.1
CDS-3UTR CCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGACCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LATLADGQLQHPVHLFIGPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAACTGGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QLDDRRVVRACQSPRNPRWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...GCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGATGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCAGCCTTGCGCACAGTaGAGGCCACTTTTACTACGT +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCQPCAQ*RPLLLR
Trigger: ACGTAGTAAAAGTGGCCTTCACTGTGCGCAAGGCTG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAATCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGATTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRLVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGTTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPTACRLLLERTHRDTCPWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAACTGGATGACAGGAGAGTGGTCAGAGCATGCCAAAGCCCTCGCAACCCTCGCGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: QLDDRRVVRACQSPRNPRAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...GCGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: LATLADGQLQHPVHLFIGAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCGTTTCCCAACAGGGCTaGGCCCCGTGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGVSQQG*APCAIS
Trigger: GGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAAC...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCCAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCQGAID*QRTPQD
Trigger: ATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTG...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGACAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGQGAID*QRTPQD
Trigger: ATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTG...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCCTCGTCAACAGCAGTaGATGGCCGGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCPRQQQ*MAGAGK
Trigger: CTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCTGCCGAAGCTCTCGCTaGAAAAAGTTCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPCRSSR*KKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGACCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTCTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGTTGAGCTCAAGAGCTTaGGACCAGCCTGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPALSSRA*DQPEQH
Trigger: ATGTTGCTCAGGCTGGTCCCAAGCTCTTGAGCTCAA...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681599.1
3UTR CAA 72 bp ATCCCATGGGAAAACATTTGGGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGAGCAGTGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: IPWENIWASSST*SWSLRRAVTMW
Trigger: CCACATGGTCACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR TCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCAAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: GPTACRLLLERTHRDTCPSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKKFTLS*KVSEPP
Trigger: AGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTT...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: HQFPNRAEPRVPSPSATEVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGCGATTAGGGTTGGGATGATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RKLIHFQAQMSGAIRVGMIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...CATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGTTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQLVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAEPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGEPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGTGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACACAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTTGGGCCAGGTGTCTTaGGTACTCATTCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGLGQVS*VLILSG
Trigger: GCCAGAGAGAATGAGTACTCAAGACACCTGGCCCAA...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAATCCAAAGTATCATCTaGGACAAGGCAAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPIQSII*DKASPF
Trigger: GAAGGGACTTGCCTTGTCTCAGATGATACTTTGGAT...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAATCAGGTCCCGTCAATaGCAACAGACAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKIRSRQ*QQTAED
Trigger: ATCCTCGGCTGTCTGTTGGCATTGACGGGACCTGAT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTCGCTGATGGCCAGCTaGAGCATCCTGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFSLMAS*SILCTS
Trigger: AGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTCGCTGATGGCCAGCTaGAGCATCCTGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCSLMAS*SILCTS
Trigger: AGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGA...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPAALPKS*LVSGLC
Trigger: ACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGC...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRALPKS*LVSGLC
Trigger: ACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCATCTTCCTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCTTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSSSSTAVDGRRWEEVMCFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...GCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGAAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGAACAGACCCCAGAGTTaGTCTCCACCCGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMNRPQS*SPPGLG
Trigger: TCCCAGGCCGGGTGGAGACCAACTCTGGGGTCTGTT...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGCGATTAGGGTTGGGATGAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: RKLIHFQAQMSGAIRVGMKRSCA*VAGAME
Trigger: CTCCATGGCACCTGCCACCCATGCACATGACCTCTT...CATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCGGATGCACTAATGCTTaGTTGTTGTCACTGAACCGG +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPGCTNA*LLSLNR
Trigger: CCGGTTCAGTGACAACAACCAAGCATTAGTGCATCC...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATCGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTATGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ERTHRDTCPRAVPQTHTFSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...AAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGCCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACCTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTATGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGATTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGLELGS*RTSWVT
Trigger: AGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAA...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCAGCCTTGCGCACAGTaGAGGCCACTTTTACTACGT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSQPCAQ*RPLLLR
Trigger: ACGTAGTAAAAGTGGCCTTCACTGTGCGCAAGGCTG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACACACCAAGCTTCACTGTaGTTTCATAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTHQASL*FHNAQP
Trigger: AGGCTGGGCGTTATGAAATCACAGTGAAGCTTGGTG...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMLENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCTGGTTAAAACATGTGTGTGCAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAGTAAATGCTCACGCCTaGAGTGGACACATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: SWLKHVCAVGSVLWVGAAVNAHA*SGHIAF
Trigger: GAACGCAATGTGTCCACTTCAGGCGTGAGCATTTAC...TGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGTTTTAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCCCAGTAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: QIVLCRLAQTIPGEALPSKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...ACTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCCATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAATGAGACACCAGTACTCTCTTCTTCTTGAGGGCCGAGCTCATGAATGGACACCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: QMRHQYSLLLEGRAHEWTPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...TGTCCATTCATGAGCTCGGCCCTCAAGAAGAAGAGAGTACTGGTGTCTCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCAGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GPTACRLLLERTHRDTCPAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: SMEAASRMQGESQEHLESTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...ACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVEPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCTATATTGAATTTCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: FYIEFHAKVACGRYGQGAPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGAAATTCAATATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGCCTCGCAACCCTCGCTaGTGGCCAGCTGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLPRNPR*WPAAAS
Trigger: GGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAGG...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGTGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ERTHRDTCPRAVPQTHTFWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...AAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 4 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTGAGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRAELMNGQGVIVLISQGPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...TCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSLSSAG*NRLPKD
Trigger: GTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGG +
Preference number: 4 (lower is better)
Translates to: RAELMNGQGVIVLISQGHALGRP*CGPPHR
Trigger: CCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGC...ATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGACTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRLFICT*RSSRWK
Trigger: TTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAG...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGACTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGAGGACAAATGATGACTaGGAAAGACTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERRTNDD*ERLRSG
Trigger: GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCT...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGCAGGGCTTGGTCTCTaGCAATTTTCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCAGLGL*QFSRNM
Trigger: CATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGCGATTAGGGTTGGGATaGACCTTCTTCATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERRLGLG*TFFILE
Trigger: TTCCAGGATGAAGAAGGTGCATCCCAACCCTAATCG...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555330.5
CDS-3UTR GCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCCAGGCTGCTTTTGCTaGTCTGCCTCACTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHPGCFC*SASLVC
Trigger: ACAGACCAGTGAGGCAGAGCAGCAAAAGCAGCCTGG...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR GCA 90 bp CTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGGTTCCAGGCTGCTTTTaGTGCTCTGCCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: LVCSEYPQLLACRVVVNEVPGCF*CSASLV
Trigger: GACCAGTGAGGCAGAGCAGCAAAAGCAGCCTGGAAC...CTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGTCTCCACCCGGCCTaGGAACCGGCTCGGGGGATT +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLGLHPA*EPARGI
Trigger: AATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACC...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIPPPLS*EGAAAL
Trigger: GAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGG...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: SMEAASRMQGESQEHLESSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...ACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAACAGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: NHSRRGPPQSRASSSWKTGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...TGTTTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGGWQVP*SAATVG
Trigger: ACCAACTGTAGCAGCACTCCATGGCACCTGCCACCC...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCKRSCA*VAGAME
Trigger: CTCCATGGCACCTGCCACCCATGCACATGACCTCTT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFKRSCA*VAGAME
Trigger: CTCCATGGCACCTGCCACCCATGCACATGACCTCTT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGCSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCCTGGCCCTTTCACCTaGCCTGACGAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WYQIVLCRLAQTIPGEALPGPFT*PDESAA
Trigger: TGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGG...GAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGGCTGCTCTGCCTCACTaGTCTGTTCGGAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMAALPH*SVRSIH
Trigger: GTGGATACTCCGAACAGACCAGTGAGGCAGAGCAGC...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGCTTCCAACTTCCACATaGAAGAAAAACGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQLPTST*KKNATR
Trigger: CCTTGTGGCGTTTTTCTTTCATGTGGAAGTTGGAAG...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCTTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGLELGS*RTSWVT
Trigger: AGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAA...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGCACCAAGCTTCACTGTaGTTTCATAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRHQASL*FHNAQP
Trigger: AGGCTGGGCGTTATGAAATCACAGTGAAGCTTGGTG...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCACCAAGCTTCACTGTaGTTTCATAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQHQASL*FHNAQP
Trigger: AGGCTGGGCGTTATGAAATCACAGTGAAGCTTGGTG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCTGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: SNHSRRGPPQSRASSSWKVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...TTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGT +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCNRVKS*LVVSNS
Trigger: ACTATTTGATACCACCAATCAGCTCTTCACCCGGTT...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCTTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTACCTCCTCTTTCACTTaGCTGGCCAGCCGATATTGG +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFTSSFT*LASRYW
Trigger: CCAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGT...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLREPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCTCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGSSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAACCCGGACCCCAAGGATaGGTGAGGTCAGCACCCATG +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEPGPQG*VRSAPM
Trigger: CATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGG...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 4 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCCTTTCACCTGGCCTaGCGAATCTGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPFHLA*RICSRA
Trigger: AGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCLSSAG*NRLPKD
Trigger: GTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAG...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGATCAGGTCCCGTCAATaGCAACAGACAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRIRSRQ*QQTAED
Trigger: ATCCTCGGCTGTCTGTTGGCATTGACGGGACCTGAT...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSREADYT*GKLKEE
Trigger: TTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDEADYT*GKLKEE
Trigger: TTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTC...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTAATCCCAGGAGACTTTaGAAGACCGGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCNPRRL*KTGDPG
Trigger: ACCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATAATCCCAGGAGACTTTaGAAGACCGGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYNPRRL*KTGDPG
Trigger: ACCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATT...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: PQSKCSRLKWTHCVRRYSSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...AGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LAHEPSRKLIHFQAQMSGDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...CCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TCPRAVPQTHTFSGADERPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRTFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 4 (lower is better)
Translates to: LATLADGQLQHPVHLFIGTFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCGGGCTGAGCCCCGTGTaGCATCTCCCTCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPGLSPV*HLPQLL
Trigger: CAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCC...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACCAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGTTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTALPKS*LVSGLC
Trigger: ACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGC...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAACAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTATTTAACAAAGACTGGTaGCTAAGGACCACCACAGGG +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVFNKDW*LRTTTG
Trigger: CCCTGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAA...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAGCAGGGCTTGGTCTCTaGCAATTTTCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTAGLGL*QFSRNM
Trigger: CATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGC...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACGGTCTCCACCCGGCCTaGGAACCGGCTCGGGGGATT +
Preference number: 4 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNGLHPA*EPARGI
Trigger: AATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACC...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNPPPLS*EGAAAL
Trigger: GAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGG...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCCCACTTTTACTACGTTaGAATTGGGCTCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCPLLLR*NWAPEG
Trigger: TCCTTCAGGAGCCCAATTCCAACGTAGTAAAAGTGG...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: QPRECRVSRKNTWKVCLLSRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...CAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGTGCCGAAGCTCTCGCTaGAAAAAGTTCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRCRSSR*KKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CRLAQTIPGEALPSPELLCSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...AAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR CCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTGCGGGACTGCTCCTATaGGCCACCTCCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSAGLLL*ATSYLS
Trigger: GGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGC...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGTGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAATGAGACACCAGTACTCTCTTCTTCTTGAGGGCCGAGCTCATGAATGGACACATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QMRHQYSLLLEGRAHEWTHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...TGTCCATTCATGAGCTCGGCCCTCAAGAAGAAGAGAGTACTGGTGTCTCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: RMQGESQEHLESLPVGCYKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...GTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCCTCTCCTTACAGCTaGGCTCCACAGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLRSSPYS*APQEVE
Trigger: TTCAACCTCCTGTGGAGCTCAGCTGTAAGGAGAGGA...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGT +
Preference number: 4 (lower is better)
Translates to: GDKILQTQGSMRHLLADGNRVKS*LVVSNS
Trigger: ACTATTTGATACCACCAATCAGCTCTTCACCCGGTT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCTGAGATGGAGAAATTCCGAGTGGCTTTCAGAGACAGAGCCAAACATCACAAACCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: SEMEKFRVAFRDRAKHHKPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...TTTGTGATGTTTGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAACCAGGAAAGAGCGGGTaGAGCGAGCTCGGACCAACT +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEPGKSG*SELGPT
Trigger: AGTTGGTCCGAGCTCGCTTCACCCGCTCTTTCCTGG...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACATTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGATTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: PQSKCSRLKWTHCVRRYSPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...AGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTTGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGGTCTGTTCGGAGTATCCACAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: LVCSEYPQLLACRVVVNEAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...CTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATACTCCGAACAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: GLTNLQQGLVSANFPETCDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACTCCCGAGCCGGGGGTTaGAGCGCGACGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNSRAGG*SATKFH
Trigger: GTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGA...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCATCCCGAGCCGGGGGTTaGAGCGCGACGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKASRAGG*SATKFH
Trigger: GTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGA...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGATCAGGTCCCGTCAATaGCAACAGACAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMIRSRQ*QQTAED
Trigger: ATCCTCGGCTGTCTGTTGGCATTGACGGGACCTGAT...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGTCCCACAGGCCGATGTaGAGGGAAAGGCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLSHRPM*RERLPV
Trigger: AACGGGCAGCCTTTCCCTGCACATCGGCCTGTGGGA...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACCCACAGGAGGTTGAATaGCATCATCCACCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNPQEVE*HHPPPV
Trigger: CACTGGTGGTGGATGATGGCATTCAACCTCCTGTGG...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: QPRECRVSRKNTWKVCLLPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...CAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTTCGCTGATGGCCAGCTaGAGCATCCTGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGISLMAS*SILCTS
Trigger: AGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGA...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KPQSKCSRLKWTHCVRRYIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...ATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTCTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: ECRVSRKNTWKVCLLDVTLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...AGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATTCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYSKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSALPKS*LVSGLC
Trigger: ACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGC...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGIRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATAGGAGGGCTCAGACATaGTTCCAGGAGGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KPQSKCSRLKWTHCVRRYRRAQT*FQEAKA
Trigger: TGCCTTGGCCTCCTGGAAGCATGTCTGAGCCCTCCT...ATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCACAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCACGATTAGGGTTGGGATaGACCTGTCCAAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GPTACRLLLERTHRDTCPRLGLG*TCPRKR
Trigger: TCTCTTTCTTGGACAGGTGCATCCCAACCCTAATCG...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR GCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTACCGGCTCGGGGGATTaGCCTTTCCCCAAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGITGSGD*PFPKEF
Trigger: AAACTCCTTGGGGAAAGGGCAATCCCCCGAGCCGGT...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000681099.1
ENST00000681535.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCCACAGCTGCTAGCTTaGAGGGTTGTTGTGAATGAG +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMPQLLA*RVVVNE
Trigger: CTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGG...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACGGTCTCCACCCGGCCTaGGAACCGGCTCGGGGGATT +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDGLHPA*EPARGI
Trigger: AATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACC...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAACCACTTTTACTACGTTaGAATTGGGCTCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKPLLLR*NWAPEG
Trigger: TCCTTCAGGAGCCCAATTCCAACGTAGTAAAAGTGG...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSGWQVP*SAATVG
Trigger: ACCAACTGTAGCAGCACTCCATGGCACCTGCCACCC...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQGWQVP*SAATVG
Trigger: ACCAACTGTAGCAGCACTCCATGGCACCTGCCACCC...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPGWQVP*SAATVG
Trigger: ACCAACTGTAGCAGCACTCCATGGCACCTGCCACCC...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGIGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAACCTTCTCAGGGGTGTaGCACTCAGAGGGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPTFSGV*HSEGES
Trigger: AGACTCGCCCTCTGAGTGCCACACCCCTGAGAAGGT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLRSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATTGCCGAAGCTCTCGCTaGAAAAAGTTCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHCRSSR*KKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGTGCCGAAGCTCTCGCTaGAAAAAGTTCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQCRSSR*KKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTGCCGAAGCTCTCGCTaGAAAAAGTTCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCCRSSR*KKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACATGGAGAAATTCCGAGTaGCTTTCAGAGACGATTCCA +
Preference number: 4 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTWRNSE*LSETIP
Trigger: TGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCA...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTATGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVCSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGGGATGCACTAATGCTTaGTTGTTGTCACTGAACCGG +
Preference number: 4 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRGCTNA*LLSLNR
Trigger: CCGGTTCAGTGACAACAACCAAGCATTAGTGCATCC...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGCCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLRPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTGAGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGAGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 4 (lower is better)
Translates to: LRAELMNGQGVIVLISQGVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...TCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACCACGTGCCCCCAGCTaGAAACCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEPRAPS*KPLSGP
Trigger: GGGCCCAGAAAGGGGTTTCCAGCTGGGGGCACGTGG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGACTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KASVVSKPAICLGMPHSGLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGIGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCTTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 4 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCLFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCTTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCLFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TPGKSACWMLLISQMRHQSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...CTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR TCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTGTAAATGCTCACGCCTaGAGTGGACACATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSVNAHA*SGHIAF
Trigger: GAACGCAATGTGTCCACTTCAGGCGTGAGCATTTAC...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAAGCTCCACAGGAGGTTaGATGCCATCATCCACCACC +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQSSTGG*MPSSTT
Trigger: GGTGGTGGATGATGGCATTCAACCTCCTGTGGAGCT...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGKFTLS*KVSEPP
Trigger: AGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGTTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQLVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGTTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGTGTCTTCTTCATGAATGTTTGGGCCAGGTGTCTTGAGTACTCATTCTCTCTGGAGCCTGTTGTGAACTaGAGTAGCCGAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: GVFFMNVWARCLEYSFSLEPVVN*SSRANS
Trigger: GGAGTTGGCTCGGCTACTTCAGTTCACAACAGGCTC...CAGAGAGAATGAGTACTCAAGACACCTGGCCCAAACATTCATGAAGAAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp TATATTGAATTTCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAGGTGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: YIEFHAKVACGRYGQGAGERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...ACCTGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGAAATTCAATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCTCCAGGTGGTAGCTaGGAGGAGCCTGTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRPPGGS*EEPVVN
Trigger: GTTCACAACAGGCTCCTCTCAGCTACCACCTGGAGG...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCTATATTGAATTTCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCATGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FYIEFHAKVACGRYGQGAWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGAAATTCAATATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTGGGAGCCAACTGGATaGCAGGAGAGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLWEPTG*QESGQS
Trigger: GCTCTGACCACTCTCCTGTCATCCAGTTGGCTCCCA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLERACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLRMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATATCAGGTCCCGTCAATaGCAACAGACAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYIRSRQ*QQTAED
Trigger: ATCCTCGGCTGTCTGTTGGCATTGACGGGACCTGAT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAAATTGTGAAGAAGAATaGAACCACAGACACTGTGAT +
Preference number: 4 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRNCEEE*NHRHCD
Trigger: ATCACAGTGTCTGTGGTTGCATTCTTCTTCACAATT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATAAGCAGCCTCGAGAATaGAGGGTGAGTCGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYKQPRE*RVSRKN
Trigger: GTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: SMEAASRMQGESQEHLESKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...ACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGTGCATGGGTGGCAGGTaGCATGGAGTGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLCMGGR*HGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCA...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCGCAGATGAGCGGGGCGATTAGGGTTGGGATGCACCTGTCCAAGAAAGAGATACAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: AQMSGAIRVGMHLSKKEIQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...TATCTCTTTCTTGGACAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKTFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTCGCTGATGGCCAGCTaGAGCATCCTGTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLSLMAS*SILCTS
Trigger: AGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 4 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFILRVD*PIGNGS
Trigger: GCTACCATTCCCAATGGGGCAGTCAACTCTGAGAAT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMILRVD*PIGNGS
Trigger: GCTACCATTCCCAATGGGGCAGTCAACTCTGAGAAT...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGAGGACAAATGATGACTaGGAAAGACTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRRTNDD*ERLRSG
Trigger: GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCT...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTAGGACAAATGATGACTaGGAAAGACTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVRTNDD*ERLRSG
Trigger: GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCT...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGGGGAAGAGAGGATCATaGAAAGGAGGAAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMGKRGS*KGGSLF
Trigger: GAAGAGACTTCCTCCTTTGCATGATCCTCTCTTCCC...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR GCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAGCCGAGGATCACAGCTaGAGCTGTAATCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPAEDHS*SCNPST
Trigger: AGTGCTGGGATTACAGCTGCAGCTGTGATCCTCGGC...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCTCAGGTCAGTGTTTCTaGGATGAACTGGATGAACTC +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSSGQCF*DELDEL
Trigger: GAGTTCATCCAGTTCATCCCAGAAACACTGACCTGA...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGTCAGGTCAGTGTTTCTaGGATGAACTGGATGAACTC +
Preference number: 4 (lower is better)
Translates to: LRHASRRPRHCQSPALFQSGQCF*DELDEL
Trigger: GAGTTCATCCAGTTCATCCCAGAAACACTGACCTGA...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRSRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: RAELMNGQGVIVLISQGHCSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...ATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGGGTCATGTGCATGGGTaGCAGGTGCCATGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLGHVHG*QVPWSA
Trigger: AGCACTCCATGGCACCTGCCACCCATGCACATGACC...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCTGCCGAAGCTCTCGCTaGAAAAAGTTCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WYQIVLCRLAQTIPGEALCRSSR*KKFTLS
Trigger: GGACAAGGTGAACTTTTTCCAGCGAGAGCTTCGGCA...GAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR CCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCACGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATCCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAGTAGGGAGGCACAGCTaGTTAAAACATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKVGRHS*LKHVCA
Trigger: TGCACACACATGTTTTAACCAGCTGTGCCTCCCTAC...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATGTAGGGAGGCACAGCTaGTTAAAACATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHVGRHS*LKHVCA
Trigger: TGCACACACATGTTTTAACCAGCTGTGCCTCCCTAC...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACTGGCATGGAGGATCCTaGGGTATAGAGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHWHGGS*GIETLM
Trigger: CATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAACTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCCTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGCTGGTTGGGTTGCAATaGTGCCTAAGATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRLVGLQ*CLRCSE
Trigger: TTCAGAGCATCTTAGGCACCATTGCAACCCAACCAG...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGCTGGTTAAAACATGTGTGTGCAGTAGGCAGCGTGCTATGGGTCGGAGCGGCATTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 4 (lower is better)
Translates to: SWLKHVCAVGSVLWVGAALFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...TGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGTTTTAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAACCTGGCCCTTTCACCTaGCCTGACGAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQPGPFT*PDESAA
Trigger: TGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGG...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 72 bp TTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGTGAAGCGAGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: FKVLVMHTQSYD*GQERAGEASSD
Trigger: GTCCGAGCTCGCTTCACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
3UTR CAA 72 bp GTTGGTGGGATTATCATACTCATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCCACAGGTCAATACAAG +
Preference number: 4 (lower is better)
Translates to: VGGIIILISGYY*KGVRLPTGQYK
Trigger: CTTGTATTGACCTGTGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCCACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCGAGGGCCCATGTTCTaGGAACCAAGTAGAGCACTC +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRRGPMF*EPSRAL
Trigger: GAGTGCTCTACTTGGTTCTCAGAACATGGGCCCTCG...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCCATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGCATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTTTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGILELGS*RTSWVT
Trigger: AGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAA...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTTTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGILELGS*RTSWVT
Trigger: AGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAA...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTCAGCCTTGCGCACAGTaGAGGCCACTTTTACTACGT +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGIQPCAQ*RPLLLR
Trigger: ACGTAGTAAAAGTGGCCTTCACTGTGCGCAAGGCTG...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATCACCAAGCTTCACTGTaGTTTCATAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYHQASL*FHNAQP
Trigger: AGGCTGGGCGTTATGAAATCACAGTGAAGCTTGGTG...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGTCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGGTCATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCTCTCGGGGTACTATTTaGAGGGTGTGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WVICFKVLVMHTQSYDLGSRGTI*RVCGCP
Trigger: TGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGA...GCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGATGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGAGTAAATGCTCACGCCTaGAGTGGACACATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRVNAHA*SGHIAF
Trigger: GAACGCAATGTGTCCACTTCAGGCGTGAGCATTTAC...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGT +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQNRVKS*LVVSNS
Trigger: ACTATTTGATACCACCAATCAGCTCTTCACCCGGTT...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGAGCTCCACCTGTCATaGGTTCTACAACCTTATCCA +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQELHLS*VLQPYP
Trigger: TGGATAAGGTTGTAGAACTCATGACAGGTGGAGCTC...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGTTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGTTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGGAGAGGAGCCTGTTGTaGACTGAAGTAGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: TPGKSACWMLLISQMRHQERSLL*TEVAEP
Trigger: TGGCTCGGCTACTTCAGTTCACAACAGGCTCCTCTC...CTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGACCTTCAGGGTGACTTTGGAATGTGGTCTTTTCATATGTACCTGCCGAAGCGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: LTFRVTLECGLFICTCRSGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...GCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGALLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTTCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGISSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTAGGGCTTGTTCCTCATaGTCCCTGCGAACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIRACSS*SLRTGG
Trigger: CCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCT...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGATTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRFPETC*HSPRYS
Trigger: TGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAA...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSLSSAG*NRLPKD
Trigger: GTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAG...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCAATCCCAGGAGACTTTaGAAGACCGGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: TSVPITNSGKSISSLQASNPRRL*KTGDPG
Trigger: ACCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATT...GCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SMEAASRMQGESQEHLESDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...ACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAATGGGAAGAGGTCATGTaGATGGGTGGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEWEEVM*MGGRCH
Trigger: ATGGCACCTGCCACCCATGCACATGACCTCTTCCCA...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGGATTATCATACTCATCTCGGGGTACTATTTGAAGGGTGTGCGGCTGCCCACACTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GIIILISGYYLKGVRLPTLFICT*RSSRWK
Trigger: TTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAG...TGTGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRTHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCCAGGAAAGAGCGACTCATAGAGACACTTaGCCACGAGCCGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: FKVLVMHTQSYDLGQERATHRDT*PRAVPQ
Trigger: TTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGT...CGCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 4 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADTFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCACTATGCCTACCATTGTaGAGCGGGACTGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPLCLPL*SGTAPM
Trigger: CATAGGAGCAGTCCCGCTGCACAATGGTAGGCATAG...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGCAGTGCCATGGCCTATaGCTACCATTGTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLQCHGL*LPLCSG
Trigger: CCCGCTGCACAATGGTAGGCATAGGCCATGGCACTG...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 4 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGTTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: QPRECRVSRKNTWKVCLLLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...CAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLRILRVD*PIGNGS
Trigger: GCTACCATTCCCAATGGGGCAGTCAACTCTGAGAAT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACCAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCAGAACCAGTCCACGTaGCCCCAGCTGGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLQNQST*PQLETP
Trigger: AGGGGTTTCCAGCTGGGGGCACGTGGACTGGTTCTG...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGACCACCACAGGGATaGAGCTTCCCTGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLGPPQG*SFPGWV
Trigger: AACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCC...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGISRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTTGCTCACGCCTGAAGTaGACACATTGCGTTCGACGA +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGICSRLK*THCVRR
Trigger: TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCA...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGGTGGATGGCCGGCGCTaGGAAGAGGTCATGTGCATG +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLVDGRR*EEVMCM
Trigger: CATGCACATGACCTCTTCCCAGCGCCGGCCATCCAC...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAGTCAACAGCAGTGGATaGCCGGCGCTGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKAVNSSG*PALGRG
Trigger: ACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGAC...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGISVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGTGGAGAAATTCCGAGTaGCTTTCAGAGACGATTCCA +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQWRNSE*LSETIP
Trigger: TGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCA...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCCSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGATGCACTAATGCTTaGTTGTTGTCACTGAACCGG +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQGCTNA*LLSLNR
Trigger: CCGGTTCAGTGACAACAACCAAGCATTAGTGCATCC...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTTCTCGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QSKCSRLKWTHCVRRYSSRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGATTCGCATTGGTGACTaGAGTTTGAGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQIRIGD*SLSSTC
Trigger: ACAGGTGGAGCTCAAACTCCAGTCACCAATGCGAAT...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATCCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: DKILQTQGSMRHLLADGYPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGCGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: TPGKSACWMLLISQMRHQRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...CTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTGTAGGGAGGCACAGCTaGTTAAAACATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSVGRHS*LKHVCA
Trigger: TGCACACACATGTTTTAACCAGCTGTGCCTCCCTAC...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTGGGATGCAGCTTCCCTaGTTGGGTTGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPGMQLP*LGCNGA
Trigger: GGCACCATTGCAACCCAACCAGGGAAGCTGCATCCC...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGAATTTCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMNFMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGAAATT...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR CAA 72 bp TCCAACAAGGCATGTCTGCTGACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATATGTACCTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SNKACLLTFRVT*ECGLFICTCRS
Trigger: GCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAGCAGACATGCCTTGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTTTGGTGACTGGAGTTTaGGCTCCACCTGTCATGAGT +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGILVTGV*APPVMS
Trigger: ACTCATGACAGGTGGAGCTCAAACTCCAGTCACCAA...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCTTTTATTCGCATTGGTaGCTGGAGTTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGFYSHW*LEFELH
Trigger: GTGGAGCTCAAACTCCAGTCACCAATGCGAATAAAA...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAGGCAATAATCTGAAATaGGGGACAGAGGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPGNNLK*GTEGGK
Trigger: TTTGCCGCCCTCTGTCCCTCATTTCAGATTATTGCC...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 4 (lower is better)
Translates to: APMCQERTNDDCERLRSGVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAGAGCAAAGATACTTTTaGATAGAGTTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVEQRYF*IEFRQR
Trigger: TCTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTC...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGCATGGAAGCAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTACTCTCTCATCTCTTTaGCATATTGTACCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SMEAASRMQGESQEHLESTLSSL*HIVPFP
Trigger: GGGAAAAGGTACAATATGTCAAAGAGATGAGAGAGT...ACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTGCTTCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATTTGGTGTCTTCTTCATaGATGTTTGGGCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYLVSSS*MFGPGV
Trigger: GACACCTGGCCCAAACATTCATGAAGAAGACACCAA...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR GCA 90 bp AAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTGCCGAGGATCACAGCTaGAGCTTTAAACGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KVCLLDVTDFSNETPVLSAEDHS*SFKRGP
Trigger: GGGCCCTCGTTTAAAGCTGCAGCTGTGATCCTCGGC...AGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QAGHTSVPITNSGKSISSEADYT*GKLKEE
Trigger: TTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTC...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTGAAGGGTGTGCGGCTGCCCACAGGTCAATACAAGAGTAGAAAAGTGGCACACCTGAAGTGGACACATTaGGTTCGACGATATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKGVRLPTGQYKSRKVAHLKWTH*VRRYSS
Trigger: AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAG...GTGTGCCACTTTTCTACTCTTGTATTGACCTGTGGGCAGCCGCACACCCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR GCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLRKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCATTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGALGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGGTTGGGTTGCAATGGTaGCTAAGATGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQVGLQW*LRCSEK
Trigger: TTTTTCAGAGCATCTTAGGCACCATTGCAACCCAAC...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTTCTAGGAACCACCATTCATaGACTCGGAAGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: QSKCSRLKWTHCVRRYSSRNHHS*TRKAML
Trigger: CAGCATGGCCTTCCGAGTGCATGAATGGTGGTTCCT...AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553279.5
CDS-3UTR GCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCACTGCTTTTGCTGCTCTaGCTCACTGGTCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPLLLLL*LTGLFG
Trigger: TCCGAACAGACCAGTGAGGCAGAGCAGCAAAAGCAG...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGT +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLSRSSF*RKLTTR
Trigger: ACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTTTACTACGTTGGAATTaGGCTCCTGAAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSLLRWN*APEGLP
Trigger: AGGAAGTCCTTCAGGAGCCCAATTCCAACGTAGTAA...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTTACTACGTTGGAATTaGGCTCCTGAAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: RSAPMCQERTNDDCERLRLLRWN*APEGLP
Trigger: AGGAAGTCCTTCAGGAGCCCAATTCCAACGTAGTAA...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCCACTTTTACTACGTTaGAATTGGGCTCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGPLLLR*NWAPEG
Trigger: TCCTTCAGGAGCCCAATTCCAACGTAGTAAAAGTGG...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCACATCTCTCAAGGACATaGAATTGTTGGTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: AQLTYHAKVACGRYGQGAHLSRT*NCWWDY
Trigger: ATAATCCCACCAACAATTCCATGTCCTTGAGAGATG...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGGGGTGGCAGGTGCCATaGAGTGCTGCTACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLGWQVP*SAATVG
Trigger: ACCAACTGTAGCAGCACTCCATGGCACCTGCCACCC...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAAGTGTGAGCAGCTTATaGACAGGGTCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPSVSSL*TGSGPR
Trigger: CCTTGGTCCTGACCCTGTCCATAAGCTGCTCACACT...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQCSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACTGCTCCAATCTGAGATaGAGAAATTCCGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNCSNLR*RNSEWL
Trigger: AAGCCACTCGGAATTTCTCCATCTCAGATTGGAGCA...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TGGGTCATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCCGCAGTCCTATGATTTaGGCCAGGAAAGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: WVICFKVLVMHTQSYDLGRSPMI*ARKERV
Trigger: CACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCG...GCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGATGACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAACCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 4 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCACCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLCSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGTTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 4 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRLFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCACCTGGCCCTTTCACCTaGCCTGACGAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKAPGPFT*PDESAA
Trigger: TGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGG...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGAAAGCTCCTAGCATATaGGAAGAGAGGATCATGCAA +
Preference number: 4 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMKAPSI*EERIMQ
Trigger: TTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTT...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCACATTCTGGAGGAAGCTaGCTACACGTGCGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKAHSGGS*LHVRQA
Trigger: AGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATG...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGGTCATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCTTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: WVICFKVLVMHTQSYDLGLELGS*RTSWVT
Trigger: AGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAA...GCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGATGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCCACCAAGCTTCACTGTaGTTTCATAACGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPHQASL*FHNAQP
Trigger: AGGCTGGGCGTTATGAAATCACAGTGAAGCTTGGTG...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGTAAATGCTCACGCCTaGAGTGGACACATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEVNAHA*SGHIAF
Trigger: GAACGCAATGTGTCCACTTCAGGCGTGAGCATTTAC...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAGTAAATGCTCACGCCTaGAGTGGACACATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQVNAHA*SGHIAF
Trigger: GAACGCAATGTGTCCACTTCAGGCGTGAGCATTTAC...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCCAGGAACATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: ICFKVLVMHTQSYDLGQEHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...TTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp TTTCAGAGACAGAGCCAAACATCACAAACACTTTCTGGACAGGAACCAAGCCTTAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FQRQSQTSQTLSGQEPSLKFTLS*KVSEPP
Trigger: AGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTT...AAGGCTTGGTTCCTGTCCAGAAAGTGTTTGTGATGTTTGGCTCTGTCTCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR TCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQKFTLS*KVSEPP
Trigger: AGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTT...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEKFTLS*KVSEPP
Trigger: AGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTT...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEIFRRR*AGRLGL
Trigger: CAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAAT...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGGTCATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: WVICFKVLVMHTQSYDLGAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...GCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGATGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR TCA 90 bp ATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCATGCAAAGGAGGAAGGGAGCGGCAATAATCTaGAATGAGGGACAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: INTKAPSIWEERIMQRRKGAAII*NEGQRA
Trigger: CGCCCTCTGTCCCTCATTTCAGATTATTGCCGCTCC...CTTCCTCCTTTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGTGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATATGGTCCTCTTCTCATaGCAGAATGAAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KPQSKCSRLKWTHCVRRYMVLFS*QNEELS
Trigger: GCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCAT...ATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp GTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTTCTCAATCACCCCACCCATaGGAAGGACTCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: VCLLDVTDFSNETPVLSSQSPHP*EGLKYQ
Trigger: CTGGTACTTGAGTCCTTCTCATGGGTGGGGTGATTG...AGAAGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGCTCCTTCCTGATAACTaGTGGAGCAAAGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLLLPDN*WSKGEY
Trigger: GTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAG...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAATGACTGCGAAAGACTaGGGTCAGGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEMTAKD*GQAGTV
Trigger: TACAGTTCCTGCCTGACCTCAGTCTTTCGCAGTCAT...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCACTCTCTCATCTCTTTaGCATATTGTACCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFTLSSL*HIVPFP
Trigger: GGGAAAAGGTACAATATGTCAAAGAGATGAGAGAGT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTGCCGAGGATCACAGCTaGAGCTTTAAACGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIAEDHS*SFKRGP
Trigger: GGGCCCTCGTTTAAAGCTGCAGCTGTGATCCTCGGC...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
CDS-3UTR GCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLEADYT*GKLKEE
Trigger: TTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTC...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLREADYT*GKLKEE
Trigger: TTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTC...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: ECRVSRKNTWKVCLLDVTNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...AGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTGAAGTGGACACATTaGGTTCGACGATATTCTTCT +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCLKWTH*VRRYSS
Trigger: AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAG...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTTGCATGGGTGGCAGGTaGCATGGAGTGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLCMGGR*HGVLLQ
Trigger: CTGTAGCAGCACTCCATGGCACCTGCCACCCATGCA...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: EGLKYQSGQVVRAKEGVSILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...GGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAATCCAAGCCAGCCATATaGCTAGGCATGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWESKPAI*LGMPHS
Trigger: AGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGA...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 4 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCTTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTGCAGGGCTTGGTCTCTaGCAATTTTCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIAGLGL*QFSRNM
Trigger: CATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGC...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAACATCTCTCAAGGACATaGAATTGTTGGTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKHLSRT*NCWWDY
Trigger: ATAATCCCACCAACAATTCCATGTCCTTGAGAGATG...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: PQSKCSRLKWTHCVRRYSSRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...AGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNKRSCA*VAGAME
Trigger: CTCCATGGCACCTGCCACCCATGCACATGACCTCTT...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATGGAGAAATTCCGAGTaGCTTTCAGAGACGATTCCA +
Preference number: 4 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRWRNSE*LSETIP
Trigger: TGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCA...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACTGGAGAAATTCCGAGTaGCTTTCAGAGACGATTCCA +
Preference number: 4 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHWRNSE*LSETIP
Trigger: TGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCA...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATATTCGCATTGGTGACTaGAGTTTGAGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: KPQSKCSRLKWTHCVRRYIRIGD*SLSSTC
Trigger: ACAGGTGGAGCTCAAACTCCAGTCACCAATGCGAAT...ATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTCCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAGTAGGCAGCGTGCTATaGGTCGGAGCGGCAATAATC +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEVGSVL*VGAAII
Trigger: GATTATTGCCGCTCCGACCCATAGCACGCTGCCTAC...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTTGGATGACAGGAGAGTaGTCAGAGCATGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QLLACRVVVNETINTKAPWMTGE*SEHAKA
Trigger: GGCTTTGGCATGCTCTGACCACTCTCCTGTCATCCA...AGGAGCTTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGIACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTGGCAGTCCAGTGCCATaGCCTATGCCTACCATTGTG +
Preference number: 4 (lower is better)
Translates to: KVCLLDVTDFSNETPVLSGSPVP*PMPTIV
Trigger: CACAATGGTAGGCATAGGCCATGGCACTGGACTGCC...AGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGGCATGCCCCACTCTaGAGGCTACAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNRHAPL*RLQLSY
Trigger: ATAGCTGAGCTGTAGCCTCCAGAGTGGGGCATGCCT...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGCAGCTTCCCTGGTTaGGTTGCAATGGTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQICSFPG*VAMVPK
Trigger: CTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCA...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACCCTGGCCCTTTCACCTaGCCTGACGAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDPGPFT*PDESAA
Trigger: TGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGG...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCATTCCCGGCGAGGCCCTCGAAAGAGATAATGCTTaGTTGTTGTCACTGAACCGG +
Preference number: 4 (lower is better)
Translates to: WYQIVLCRLAQTIPGEALERDNA*LLSLNR
Trigger: CCGGTTCAGTGACAACAACCAAGCATTATCTCTTTC...GAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATAGTACTCATTCTCTCTaGCCTGCCTATTTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYSTHSL*PAYFPC
Trigger: ACAAGGGAAATAGGCAGGCCAGAGAGAATGAGTACT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACCAGCCTTGCGCACAGTaGAGGCCACTTTTACTACGT +
Preference number: 4 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNQPCAQ*RPLLLR
Trigger: ACGTAGTAAAAGTGGCCTTCACTGTGCGCAAGGCTG...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCAGCCTTGCGCACAGTaGAGGCCACTTTTACTACGT +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLQPCAQ*RPLLLR
Trigger: ACGTAGTAAAAGTGGCCTTCACTGTGCGCAAGGCTG...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCTCGAGAATGCAGGGTaGGTCGCAAGAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIILENAG*VARTPG
Trigger: TCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAG...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: DKPQSKCSRLKWTHCVRRWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...TCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR TCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCATCCACCACCAGTGTaGGCAGCTTATGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIHPPPV*AAYGQG
Trigger: ACCCTGTCCATAAGCTGCTCACACTGGTGGTGGATG...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTGTTCTTGCTCCAATCTaGGATGGAGAAATTCCGAGT +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIVLAPI*DGEIPS
Trigger: ACTCGGAATTTCTCCATCTCAGATTGGAGCAAGAAC...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCCAATCTGAGATGGAGAAATTCCGAGTGGCTTTCAGAGACAGAGCCAAACATCAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGT +
Preference number: 4 (lower is better)
Translates to: SNLRWRNSEWLSETEPNINRVKS*LVVSNS
Trigger: ACTATTTGATACCACCAATCAGCTCTTCACCCGGTT...GATGTTTGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR TCA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCATCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKASSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACTCATCCCTAGTGTCCTaGCGCCAAGGACCTGTGATA +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNSSLVS*RQGPVI
Trigger: TATCACAGGTCCTTGGCGTCAGGACACTAGGGATGA...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGGAGCAAAGATACTTTTaGATAGAGTTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQEQRYF*IEFRQR
Trigger: TCTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTC...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCATTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISFPETC*HSPRYS
Trigger: TGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAA...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACATCAGGTCCCGTCAATaGCAACAGACAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNIRSRQ*QQTAED
Trigger: ATCCTCGGCTGTCTGTTGGCATTGACGGGACCTGAT...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTAATTGTGAAGAAGAATaGAACCACAGACACTGTGAT +
Preference number: 4 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFNCEEE*NHRHCD
Trigger: ATCACAGTGTCTGTGGTTGCATTCTTCTTCACAATT...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTTCTGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VCLLDVTDFSNETPVLSSEADYT*GKLKEE
Trigger: TTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTC...AGAAGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACAATCCCAGGAGACTTTaGAAGACCGGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNNPRRL*KTGDPG
Trigger: ACCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATT...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTAATCCCAGGAGACTTTaGAAGACCGGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: KVCLLDVTDFSNETPVLSNPRRL*KTGDPG
Trigger: ACCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATT...AGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp ATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCCAGGAAAATCCCAGGAGACTTTaGAAGACCGGGGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: ICFKVLVMHTQSYDLGQENPRRL*KTGDPG
Trigger: ACCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATT...TTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCAGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RAWSLPIFQKHADTLLGILFICT*RSSRWK
Trigger: TTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTATCATCAGCTGCAACTaGCTGGCCCTTTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLIISCN*LALSPG
Trigger: GCCAGGTGAAAGGGCCAGGCAGTTGCAGCTGATGAT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAATCAGGTCAGTGTTTCTaGGATGAACTGGATGAACTC +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQSGQCF*DELDEL
Trigger: GAGTTCATCCAGTTCATCCCAGAAACACTGACCTGA...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAATTACTACGTTGGAATTaGGCTCCTGAAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQLLRWN*APEGLP
Trigger: AGGAAGTCCTTCAGGAGCCCAATTCCAACGTAGTAA...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCATCTCTCAAGGACATaGAATTGTTGGTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: QTQGKASVVSKPAICLGMHLSRT*NCWWDY
Trigger: ATAATCCCACCAACAATTCCATGTCCTTGAGAGATG...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCAGGTGAGGTAAAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: GAGEVKTRLVGDKILQTQGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...CTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTTTACCTCACCTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRSRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTAAGAGGTCATGTGCATaGGTGGCAGGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIKRSCA*VAGAME
Trigger: CTCCATGGCACCTGCCACCCATGCACATGACCTCTT...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTTGGAGAAATTCCGAGTaGCTTTCAGAGACGATTCCA +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGIWRNSE*LSETIP
Trigger: TGGAATCGTCTCTGAAAGCCACTCGGAATTTCTCCA...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAACCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TATCCACAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGACAATAAATACTAAACGAGCCAACTCCTCCTaGGTCAGACTGGAAACCACA +
Preference number: 4 (lower is better)
Translates to: YPQLLACRVVVNETINTKRANSS*VRLETT
Trigger: TGTGGTTTCCAGTCTGACCCAGGAGGAGTTGGCTCG...TTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CCA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCGTAGGGAGGCACAGCTaGTTAAAACATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLVGRHS*LKHVCA
Trigger: TGCACACACATGTTTTAACCAGCTGTGCCTCCCTAC...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTTCTGTAGGGAGGCACAGCTaGTTAAAACATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QSKCSRLKWTHCVRRYSSVGRHS*LKHVCA
Trigger: TGCACACACATGTTTTAACCAGCTGTGCCTCCCTAC...AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAAAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 4 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTTCTAGTGACCATGTGGCATaGAGGATCCTGGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: VCLLDVTDFSNETPVLSSSDHVA*RILGYR
Trigger: TCTATACCCCAGGATCCTCCATGCCACATGGTCACT...AGAAGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGCCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACCTGGAAACCCCTTTCTaGGCCCAAGGGGCAGCATTA +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDLETPF*AQGAAL
Trigger: TAATGCTGCCCCTTGGGCCCAGAAAGGGGTTTCCAG...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATTTCTTCATGAATGTTTaGGCCAGGTGTCTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: GACGIFWLMVMCVRISGYFFMNV*ARCLEY
Trigger: GTACTCAAGACACCTGGCCCAAACATTCATGAAGAA...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
3UTR CAA 72 bp AGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCAAATGAGACACCAGTA +
Preference number: 4 (lower is better)
Translates to: RVSRKNTWKVCL*DVTDFSNETPV
Trigger: TACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGCTTCCAACTTCCACATaGAAGAAAAACGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLLPTST*KKNATR
Trigger: CCTTGTGGCGTTTTTCTTTCATGTGGAAGTTGGAAG...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCTTCCAACTTCCACATaGAAGAAAAACGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRLPTST*KKNATR
Trigger: CCTTGTGGCGTTTTTCTTTCATGTGGAAGTTGGAAG...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAGTAAATGCTCACGCCTaGAGTGGACACATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEVNAHA*SGHIAF
Trigger: GAACGCAATGTGTCCACTTCAGGCGTGAGCATTTAC...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGT +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLNRVKS*LVVSNS
Trigger: ACTATTTGATACCACCAATCAGCTCTTCACCCGGTT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACGCGGCATCTTCTGGCTaGTGGTTATGTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNAASSG*WLCVLG
Trigger: TCCTAACACACATAACCATCAGCCAGAAGATGCCGC...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000554070.1
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AATGAGACAATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCATGCAATGGGCAGGGAGCAGGTaGGGTAAAGACAAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NETINTKAPSIWEERIMQWAGSR*GKDKAC
Trigger: ACAAGCCTTGTCTTTACCTCACCTGCTCCCTGCCCA...TTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp CAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTTCTATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: QSKCSRLKWTHCVRRYSSISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGATCTCCCTCAGCTACTaGGATCTTCAAAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLISLSY*DLQRTK
Trigger: TTTGGTCCTTTGAAGATCTCAGTAGCTGAGGGAGAT...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDLSSAG*NRLPKD
Trigger: GTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAG...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTAATTGTGAAGAAGAATaGAACCACAGACACTGTGAT +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCNCEEE*NHRHCD
Trigger: ATCACAGTGTCTGTGGTTGCATTCTTCTTCACAATT...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCACTGAAGTGGACACATTaGGTTCGACGATATTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSRKNTWKVCLLDVTDFSLKWTH*VRRYSS
Trigger: AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAG...TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTTCAGAGACAGAGCCAAACATCACAAACACTTTCTGGACAGGAACCAAGCCTTCTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: FQRQSQTSQTLSGQEPSLLFICT*RSSRWK
Trigger: TTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAG...AAGGCTTGGTTCCTGTCCAGAAAGTGTTTGTGATGTTTGGCTCTGTCTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR GCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAGTTAAAACATGTGTGTaGAGTAGGCAGCGTGCTATG +
Preference number: 4 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQVKTCV*SRQRAM
Trigger: CATAGCACGCTGCCTACTGCACACACATGTTTTAAC...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AATGAGACAATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCATGCAAAGAGTGGTCAGAGCATaGCAAAGCCCTCGCAACCCT +
Preference number: 4 (lower is better)
Translates to: NETINTKAPSIWEERIMQRVVRA*QSPRNP
Trigger: AGGGTTGCGAGGGCTTTGGCATGCTCTGACCACTCT...TTGCATGATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR GCA 90 bp CTGCTAGCTTGCAGGGTTGTTGTGAATGAGACAATAAATACTAAAGCTCCTAGCATGATGTCTGTAACTTaGGCCCAGAAGCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLACRVVVNETINTKAPSMMSVT*AQKLQR
Trigger: TCTCTGGAGCTTCTGGGCGCAAGTTACAGACATCAT...GCTAGGAGCTTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR GCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGATTGTGCAGCGGGACTaGTCCTATGGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKIVQRD*SYGPPP
Trigger: AGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAAT...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGAGGAGGCCAAGGCATTaGCAAAGTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLRRPRH*QSPALF
Trigger: AAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCT...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAATTACTACGTTGGAATTaGGCTCCTGAAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLELLRWN*APEGLP
Trigger: AGGAAGTCCTTCAGGAGCCCAATTCCAACGTAGTAA...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTGAGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATCTCTCAAGGACATaGAATTGTTGGTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: LRAELMNGQGVIVLISQGHLSRT*NCWWDY
Trigger: ATAATCCCACCAACAATTCCATGTCCTTGAGAGATG...TCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQISRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCCTCCTGGGTCAGACTaGAAACCACAGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIPPGSD*KPQSKT
Trigger: GGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGG...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTGCATGCGGCATCTTCTaGCTGATGGTTATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIACGIF*LMVMCV
Trigger: AACACACATAACCATCAGCCAGAAGATGCCGCATGC...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCACATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKAHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQITQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ATGAGAAGGACTCAAGTACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 4 (lower is better)
Translates to: MRRTQVPVWSSSEGQRGCRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...ACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTACTTGAGTCCTTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 4 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGAGCAGCACCTTGTCCTaGTCCCTGAGGAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKSSTLS*SLRRAV
Trigger: CACTGCTCTCCTCAGGGACCAGGACAAGGTGCTGCT...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGCCTGGCCCTTTCACCTaGCCTGACGAATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKPGPFT*PDESAA
Trigger: TGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGG...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAATGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCTGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTAAGTTCACCTTGTCCTaGAAGGTCTCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLKFTLS*KVSEPP
Trigger: AGGAGGCTCTGAGACCTTTCAGGACAAGGTGAACTT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCCTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 4 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLLLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTACTCTCTCATCTCTTTaGCATATTGTACCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLCLSAAREHQAERESGITLSSL*HIVPFP
Trigger: GGGAAAAGGTACAATATGTCAAAGAGATGAGAGAGT...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCACTCATGTCTGTTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: LPIFQKHADTLLGIHSCLFPETC*HSPRYS
Trigger: TGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAA...CAGACATGAGTGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQNTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAACTGAAGTGGACACATTaGGTTCGACGATATTCTTCT +
Preference number: 4 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLELKWTH*VRRYSS
Trigger: AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAG...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTGACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAACTGAAGTGGACACATTaGGTTCGACGATATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTAPLGMVACSKAFLKTQLKWTH*VRRYSS
Trigger: AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAG...TTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCCAGGAAGCATTGCCAAAGTCCTaGCTTGTTTCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: ICFKVLVMHTQSYDLGQEALPKS*LVSGLC
Trigger: ACAGAGTCCTGAAACAAGGCAGGACTTTGGCAATGC...TTCCTGGCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: KMACNILRVDCPIGNGSLIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGGCAGGGCTTGGTCTCTaGCAATTTTCCAGAAACATG +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLAGLGL*QFSRNM
Trigger: CATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGC...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCTTTCAAAACCAATCATaGCTTCCCAACAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRFQNQS*LPNSPP
Trigger: TGGAGGACTGTTGGGAAGGCATGATTGGTTTTGAAA...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp TATAAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTGGCCGAGCTCATGAATaGACAAGGTGTAATTGTGCT +
Preference number: 4 (lower is better)
Translates to: YKDKPQSKCSRLKWTHCVGRAHE*TRCNCA
Trigger: AGCACAATTACACCTTGTCCATTCATGAGCTCGGCC...AACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATTCTGGAAAGTCTGCCTGTTaGATGTTACTGATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PQSKCSRLKWTHCVRRYSGKSAC*MLLISQ
Trigger: TTGAGAAATCAGTAACATCCAACAGGCAGACTTTCC...AGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAATTCGCATTGGTGACTaGAGTTTGAGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEIRIGD*SLSSTC
Trigger: ACAGGTGGAGCTCAAACTCCAGTCACCAATGCGAAT...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAGTAGGGAGGCACAGCTaGTTAAAACATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEVGRHS*LKHVCA
Trigger: TGCACACACATGTTTTAACCAGCTGTGCCTCCCTAC...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACACTCAAGTACCAGTCTaGTCAAGTAGTGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNTQVPV*SSSEGQ
Trigger: TTGGCCCTCACTACTTGACCAGACTGGTACTTGAGT...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTTGTTTAACAAAGACTaGTGCCTAAGGACCACCACA +
Preference number: 4 (lower is better)
Translates to: TPGKSACWMLLISQMRHQLFNKD*CLRTTT
Trigger: TGTGGTGGTCCTTAGGCACCAGTCTTTGTTAAACAA...CTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp TCTGAGATGGAGAAATTCCGAGTGGCTTTCAGAGACAGAGCCAAACATCACAAAATCACAAACACTTTCTaGACAGGAACCAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SEMEKFRVAFRDRAKHHKITNTF*TGTKPS
Trigger: AGAAGGCTTGGTTCCTGTCCAGAAAGTGTTTGTGAT...TTTGTGATGTTTGGCTCTGTCTCTGAAAGCCACTCGGAATTTCTCCATCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
3UTR CAA 72 bp AGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATaGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: RWLVIFSELTAP*GMVACSKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKKGARG*SSGRTP
Trigger: AGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTT...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGGCATACGCAGTCCTATaGTTTGGGCCAGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKAYAVL*FGPGKS
Trigger: GCTCTTTCCTGGCCCAAATCATAGGACTGCGTATGC...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTTTCTCTGAAATGCCATaGGCCACCAACAACTACTGC +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIFSEMP*ATNNYC
Trigger: GCAGTAGTTGTTGGTGGCTCATGGCATTTCAGAGAA...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTTGTGAATGAGACAATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCGACAAGGCTTGTAGGTaGCAAAATCCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: VVNETINTKAPSIWEERIDKACR*QNPPDT
Trigger: TGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTC...GATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATTCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR TCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTGTGCCTAAGATGCTCTaGAAAAGTGCTATGACTAGA +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIVPKML*KSAMTR
Trigger: TCTAGTCATAGCACTTTTTCAGAGCATCTTAGGCAC...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGTTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLFPETC*HSPRYS
Trigger: TGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAA...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp AAATTTTCTATATTGAATTTCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGGAGGAAGTCTCTTCTaGCTTGGTGTCTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: KFSILNFMPKWPVVDMGRGGSLF*LGVFFM
Trigger: CATGAAGAAGACACCAAGTCAGAAGAGACTTCCTCC...CCTGCCCATATCTACCACAGGCCACTTTGGCATGAAATTCAATATAGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR GCA 90 bp TGGGTCATCTGTTTCAAAGTACTTGTAATGCATACGCAGTCCTATGATTTGGGCCTGAAGTGGACACATTaGGTTCGACGATATTCTTCT +
Preference number: 4 (lower is better)
Translates to: WVICFKVLVMHTQSYDLGLKWTH*VRRYSS
Trigger: AGAAGAATATCGTCGAACGCAATGTGTCCACTTCAG...GCCCAAATCATAGGACTGCGTATGCATTACAAGTACTTTGAAACAGATGACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR GCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAAAGCCTCAAAGTAAATaGTCACGCCTGAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKAKPQSK*SRLKWT
Trigger: TGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACCTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNLFICT*RSSRWK
Trigger: TTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAG...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTACCTTTTCTCTGAAATaGCATGAGCCACCAACAACT +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQITFSLK*HEPPTT
Trigger: AGTTGTTGGTGGCTCATGGCATTTCAGAGAAAAGGT...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 4 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TATAAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTAGGTCAGCACCCATGTaGCAAGAAAGGACAAATGAT +
Preference number: 4 (lower is better)
Translates to: YKDKPQSKCSRLKWTHCVRSAPM*QERTND
Trigger: ATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT...AACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp TATAAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTTCAGGTCAGTGTTTCTaGGATGAACTGGATGAACTC +
Preference number: 4 (lower is better)
Translates to: YKDKPQSKCSRLKWTHCVSGQCF*DELDEL
Trigger: GAGTTCATCCAGTTCATCCCAGAAACACTGACCTGA...AACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CCA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCACCACTTTTACTACGTTaGAATTGGGCTCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SHLFDILYLFPTLASMKAPLLLR*NWAPEG
Trigger: TCCTTCAGGAGCCCAATTCCAACGTAGTAAAAGTGG...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTGGATGCACTAATGCTTaGTTGTTGTCACTGAACCGG +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIGCTNA*LLSLNR
Trigger: CCGGTTCAGTGACAACAACCAAGCATTAGTGCATCC...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACATTCGCATTGGTGACTaGAGTTTGAGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDIRIGD*SLSSTC
Trigger: ACAGGTGGAGCTCAAACTCCAGTCACCAATGCGAAT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGCCTCTTTCACTTGACTaGCCAGCCGATATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKPLSLD*PADIGP
Trigger: TGGCCCAATATCGGCTGGCCAGTCAAGTGAAAGAGG...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCCGGTACATATCCCATaGGAAAACATTTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIPVHIP*ENIWAS
Trigger: GCTTGCCCAAATGTTTTCCCATGGGATATGTACCGG...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
3UTR CAA 72 bp TGCCAAAGTCCTGCCTTGTTTCAGGACTCTGTGTACTaGCTGGTTTTGGCAATAAAGATGGCTTGTAATATT +
Preference number: 4 (lower is better)
Translates to: CQSPALFQDSVY*LVLAIKMACNI
Trigger: AATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCTTCCAACTTCCACATaGAAGAAAAACGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLLPTST*KKNATR
Trigger: CCTTGTGGCGTTTTTCTTTCATGTGGAAGTTGGAAG...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACTGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAATGGCTGATTTTGGTATaGAATGCAAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEWLILV*NASMEA
Trigger: TGCTTCCATGCTTGCATTTCATACCAAAATCAGCCA...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAACTTCTCATGACAGAATaGAGAGCTCAGCTTACATAC +
Preference number: 4 (lower is better)
Translates to: PLGMVACSKAFLKTQIWELLMTE*RAQLTY
Trigger: GTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAG...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACGATTTTGGTATGAAATaGAAGCATGGAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNDFGMK*KHGSSL
Trigger: GAGGCTGCTTCCATGCTTGCATTTCATACCAAAATC...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACCCTCCTATGTTCTTATaGAGGGAGCGGATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDPPMFL*RERIKV
Trigger: CACTTTTATCCGCTCCCTGCATAAGAACATAGGAGG...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACCAACCTCAAAGTTCTTaGTCCAATCTGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNQPQSS*SNLRWR
Trigger: TCTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTG...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: WLMVMCVRISGYDVCNLRILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...GCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTATTTACATCATCAGCTaGAACTGCCTGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIIYIIS*NCLALS
Trigger: TGAAAGGGCCAGGCAGTTGCAGCTGATGATGTAAAT...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTTTACTACGTTGGAATTaGGCTCCTGAAGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIILLRWN*APEGLP
Trigger: AGGAAGTCCTTCAGGAGCCCAATTCCAACGTAGTAA...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACCCACTTTTACTACGTTaGAATTGGGCTCCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDPLLLR*NWAPEG
Trigger: TCCTTCAGGAGCCCAATTCCAACGTAGTAAAAGTGG...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTCATCTCTCAAGGACATaGAATTGTTGGTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIHLSRT*NCWWDY
Trigger: ATAATCCCACCAACAATTCCATGTCCTTGAGAGATG...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCCAACAACTACTGCATaGGCTTTGAAGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIPTTTA*ALKSDT
Trigger: TGTGTCTGACTTCAAAGCCCATGCAGTAGTTGTTGG...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGCATACCATGCCAAAGTaGCCTGTGGTAGATATGGGC +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKHTMPK*PVVDMG
Trigger: GCCCATATCTACCACAGGCCACTTTGGCATGGTATG...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGCCATGGGAAAACATTTaGGCAAGCAGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKPWENI*ASSSTL
Trigger: CAAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGG...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGAGCAAAGATACTTTTaGATAGAGTTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLEQRYF*IEFRQR
Trigger: TCTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTC...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGAATTGTGAAGAAGAATaGAACCACAGACACTGTGAT +
Preference number: 4 (lower is better)
Translates to: CPIGNGSLQQSLLKNTNLNCEEE*NHRHCD
Trigger: ATCACAGTGTCTGTGGTTGCATTCTTCTTCACAATT...CAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTAACACCTGGAAAGTCTaGCTGTTGGATGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIINTWKV*LLDVTD
Trigger: ATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTT...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGTTGGGAATGGTAGCTTaGAGCAAAGCCTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLLGMVA*SKAFLK
Trigger: TTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAA...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGATTCTCAGAGTTGACTaGCCCATTGGGAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKILRVD*PIGNGS
Trigger: GCTACCATTCCCAATGGGGCAGTCAACTCTGAGAAT...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACATTCAGAAAAGCGACTaGCAAAAACAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDIQKSD*QKQQNQ
Trigger: CTGGTTCTGCTGTTTTTGGCAGTCGCTTTTCTGAAT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCATCTCTCAAGGACATaGAATTGTTGGTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLHLSRT*NCWWDY
Trigger: ATAATCCCACCAACAATTCCATGTCCTTGAGAGATG...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGAGTCGCAAGAACACCTaGAAAGTCTGCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKSRKNT*KVCLLD
Trigger: ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACT...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTACTCTCTCATCTCTTTaGCATATTGTACCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLTLSSL*HIVPFP
Trigger: GGGAAAAGGTACAATATGTCAAAGAGATGAGAGAGT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACACTCTCTCATCTCTTTaGCATATTGTACCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDTLSSL*HIVPFP
Trigger: GGGAAAAGGTACAATATGTCAAAGAGATGAGAGAGT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp AAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTAATTGTGAAGAAGAATaGAACCACAGACACTGTGAT +
Preference number: 4 (lower is better)
Translates to: KVCLLDVTDFSNETPVLSNCEEE*NHRHCD
Trigger: ATCACAGTGTCTGTGGTTGCATTCTTCTTCACAATT...AGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR GCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGCTTTTCATATGTACCTaGCGAAGCTCTCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKLFICT*RSSRWK
Trigger: TTTCCAGCGAGAGCTTCGGCAGGTACATATGAAAAG...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACATTCTTCAGTCTATCTaGTTTTCTCACTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNILQSI*FSHWLQ
Trigger: TTGTAGCCAGTGAGAAAAGCAGATAGACTGAAGAAT...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTGAGAGAATCAGGGATTaGTGGCATACTATTCTTACT +
Preference number: 4 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLERIRD*WHTILT
Trigger: AGTAAGAATAGTATGCCAGCAATCCCTGATTCTCTC...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CCA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGAGAATCAGGGATTGCTaGCATACTATTCTTACTGTT +
Preference number: 4 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLRIRDC*HTILTV
Trigger: AACAGTAAGAATAGTATGCCAGCAATCCCTGATTCT...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACGAGCAAAGATACTTTTaGATAGAGTTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: VYLLVLAIKMACNILRVDEQRYF*IEFRQR
Trigger: TCTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTC...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTGAGCAAAGATACTTTTaGATAGAGTTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLEQRYF*IEFRQR
Trigger: TCTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTC...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR TCA 90 bp TTCAGACAGAGAATAGAAAACCACAATAGTGCCAAAGGGTTTTGTTTAACAAAGTTTCCAGAAACATGCTaGCACTCTCCTAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: FRQRIENHNSAKGFCLTKFPETC*HSPRYS
Trigger: TGAATACCTAGGAGAGTGTCAGCATGTTTCTGGAAA...CTTTGTTAAACAAAACCCTTTGGCACTATTGTGGTTTTCTATTCTCTGTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR GCA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTAATTGTGAAGAAGAATaGAACCACAGACACTGTGAT +
Preference number: 4 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLNCEEE*NHRHCD
Trigger: ATCACAGTGTCTGTGGTTGCATTCTTCTTCACAATT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTCAACAGACCCCAGAGTaGGTCTCCACCCGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GDKILQTQGSMRHLLADGQQTPE*VSTRPG
Trigger: CCCAGGCCGGGTGGAGACCAACTCTGGGGTCTGTTG...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAATCCCGAGCCGGGGGTaGCAGCGCGACGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTIPSRG*QRDEVP
Trigger: TGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGAT...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGCGGGGCGATTAGGGTaGGGATGCACTAATGCTTGG +
Preference number: 5 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLAGRLG*GCTNAW
Trigger: CCAAGCATTAGTGCATCCCAACCCTAATCGCCCCGC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTCAAACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LKPFPARPSPVQSFFILEGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...TTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp TCATCTTCCTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCCAATCCCAGGAGACTTaGCAAGACCGGGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: SSSSSTAVDGRRWEEVMCQSQET*QDRGSR
Trigger: CCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATTG...GCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAGGAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGAGCTCCACAGGAGGTaGAATGCCATCATCCACCAC +
Preference number: 5 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLELHRR*NAIIHH
Trigger: GTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTC...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTCGTCAACAGCAGTGGATGGCCGGCGCTGGGAAGAGGTCATGTGCATGGGTGGCACCTCCTCTTTCACTaGACTGGCCAGCCGATATTG +
Preference number: 5 (lower is better)
Translates to: LVNSSGWPALGRGHVHGWHLLFH*TGQPIL
Trigger: CAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTG...CCACCCATGCACATGACCTCTTCCCAGCGCCGGCCATCCACTGCTGTTGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 5 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCGCAGCTCAGGAGGGCTaGTTCCTCATGATCCCTGCG +
Preference number: 5 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCAAQEG*FLMIPA
Trigger: CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGC...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 90 bp AATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGATCCCGAGCCGGGGGTTGCAGCGCGA +
Preference number: 5 (lower is better)
Translates to: NISFLDFSLVQGAID*QRTPQDPEPGVAAR
Trigger: TCGCGCTGCAACCCCCGGCTCGGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000556202.5
ENST00000557401.5
ENST00000681099.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTCAACAGACCCCAGAGTaGGTCTCCACCCGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFQQTPE*VSTRPG
Trigger: CCCAGGCCGGGTGGAGACCAACTCTGGGGTCTGTTG...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 5 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGCTGCAACTGCCTGGCCCTTTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 5 (lower is better)
Translates to: SCNCLALSPGLTNLQQGLRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...CAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAAAGGGCCAGGCAGTTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGACAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: LATLADGQLQHPVHLFIGQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAACAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATAGCAGCTCAGGAGGGCTaGTTCCTCATGATCCCTGCG +
Preference number: 5 (lower is better)
Translates to: TLADGQLQHPVHLFIGVIAAQEG*FLMIPA
Trigger: CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGC...TATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCGCGGGGCGATTAGGGTaGGGATGCACCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCAGRLG*GCTFFI
Trigger: GATGAAGAAGGTGCATCCCAACCCTAATCGCCCCGC...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555330.5
CDS GCA 90 bp ACAGCCCAAGAATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGACGCCCCAGGATCCCGAGCCGGGGGT +
Preference number: 5 (lower is better)
Translates to: TAQEYIIPGLLSSAG*NRLPKDAPGSRAGG
Trigger: ACCCCCGGCTCGGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATTCTTGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000556202.5
ENST00000557401.5
ENST00000681099.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCCATGTTCATCCCTAGTGTCCTGACGCCAAGGACCTGTGATAAGCACGTAAACCAACAGACCCCAGAGTaGGTCTCCACCCGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SMFIPSVLTPRTCDKHVNQQTPE*VSTRPG
Trigger: CCCAGGCCGGGTGGAGACCAACTCTGGGGTCTGTTG...GTTTACGTGCTTATCACAGGTCCTTGGCGTCAGGACACTAGGGATGAACATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCAATCCCAGGAGACTTaGCAAGACCGGGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: DTCPRAVPQTHTFSGADEQSQET*QDRGSR
Trigger: CCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATTG...CTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGAGCTCCACAGGAGGTaGAATGCCATCATCCACCAC +
Preference number: 5 (lower is better)
Translates to: TCPRAVPQTHTFSGADERELHRR*NAIIHH
Trigger: GTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTC...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 5 (lower is better)
Translates to: LATLADGQLQHPVHLFIGRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GLTNLQQGLVSANFPETCASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS TCA 90 bp TTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACCTTCTTCATCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LPTSRPANSYIFRRR*AGRLGLGCTFFILE
Trigger: TTCCAGGATGAAGAAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555330.5
CDS-3UTR CAA 90 bp CCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATCAATCCCAGGAGACTTaGCAAGACCGGGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: PRECRVSRKNTWKVCLLDQSQET*QDRGSR
Trigger: CCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATTG...ATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCAATCCCAGGAGACTTaGCAAGACCGGGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: LRHASRRPRHCQSPALFQQSQET*QDRGSR
Trigger: CCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATTG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGCGATTAGGGTTGGGATGATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RKLIHFQAQMSGAIRVGMISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...CATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCGCGGGGCGATTAGGGTaGGGATGCACTAATGCTTGG +
Preference number: 5 (lower is better)
Translates to: GLTNLQQGLVSANFPETCAGRLG*GCTNAW
Trigger: CCAAGCATTAGTGCATCCCAACCCTAATCGCCCCGC...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: GDKILQTQGSMRHLLADGTQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...ACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCATCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 5 (lower is better)
Translates to: VAWRILGYRDPDAGSRTPSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...TGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTAGAGTTGACTGCCCCATaGGGAATGGTAGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVELTAP*GMVACS
Trigger: GCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTC...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGTGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPACQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATGCAGCTCAGGAGGGCTaGTTCCTCATGATCCCTGCG +
Preference number: 5 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHAAQEG*FLMIPA
Trigger: CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGC...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAAGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 5 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTGCGGGGCGATTAGGGTaGGGATGCACCTGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: ERTHRDTCPRAVPQTHTFAGRLG*GCTCPR
Trigger: TCTTGGACAGGTGCATCCCAACCCTAATCGCCCCGC...AAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR CAA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTACCCCGAGCCGGGGGTaGCAGCGCGACGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RAWSLPIFQKHADTLLGITPSRG*QRDEVP
Trigger: TGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGGT...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTCAATCCCAGGAGACTTaGCAAGACCGGGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVQSQET*QDRGSR
Trigger: CCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATTG...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: QVVRAKEGVSKEYQQREFISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...AAACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGACCTGAAGTGGACACATaGCGTTCGACGATATTCTTC +
Preference number: 5 (lower is better)
Translates to: LATLADGQLQHPVHLFIGPEVDT*RSTIFF
Trigger: GAAGAATATCGTCGAACGCAATGTGTCCACTTCAGG...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCTCCACAGGAGGTaGAATGCCATCATCCACCAC +
Preference number: 5 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADELHRR*NAIIHH
Trigger: GTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTC...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTGCGGGGCGATTAGGGTaGGGATGCACTAATGCTTGG +
Preference number: 5 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCAGRLG*GCTNAW
Trigger: CCAAGCATTAGTGCATCCCAACCCTAATCGCCCCGC...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTGCGGGGCGATTAGGGTaGGGATGCACTAATGCTTGG +
Preference number: 5 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVAGRLG*GCTNAW
Trigger: CCAAGCATTAGTGCATCCCAACCCTAATCGCCCCGC...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CGCAAACTCATACATTTTCAGGCGCAGATGAGCGGGGCGATTAGGGTTGGGATGACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: RKLIHFQAQMSGAIRVGMTQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...CATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR CAA 90 bp ACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGATCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 5 (lower is better)
Translates to: TSFPTGLSPVCHLPQLLRSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...TCTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAGAGTTGACTGCCCCATaGGGAATGGTAGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRELTAP*GMVACS
Trigger: GCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTC...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAACATGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: NHSRRGPPQSRASSSWKTCQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...TGTTTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp CTGGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: LGPRGSIMFPRVVINLPVPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...TACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATCTGCAGCAGGGCTaGGTCTCTGCCAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCNLQQG*VSANFP
Trigger: TGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 90 bp CCCTCGGCGCTCGCGGTCCTCATTCTGGAGGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAACTTAATTGTGAAGAAGAATGCAAC +
Preference number: 5 (lower is better)
Translates to: PSALAVLILEEADYT*GKLKEELNCEEECN
Trigger: GTTGCATTCTTCTTCACAATTAAGTTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGAGCGCCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000553279.5
ENST00000555249.1
ENST00000555330.5
ENST00000557401.5
ENST00000680030.1
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 90 bp AAAACACTGGGCATGCATCAGGCGGGCAGATACCTACCATGTGTGTaGAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAATAATCTGAAA +
Preference number: 5 (lower is better)
Translates to: KTLGMHQAGRYLPCV*SRQRAMGRSGNNLK
Trigger: TTTCAGATTATTGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGGTAGGTATCTGCCCGCCTGATGCATGCCCAGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557688.1
CDS-3UTR CAA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCCAACAGACCCCAGAGTaGGTCTCCACCCGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLQQTPE*VSTRPG
Trigger: CCCAGGCCGGGTGGAGACCAACTCTGGGGTCTGTTG...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACACAACCTCAAAGTTCTaGCTCCAATCTGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDTTSKF*LQSEME
Trigger: CTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCACAACCTCAAAGTTCTaGCTCCAATCTGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPTTSKF*LQSEME
Trigger: CTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGT...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCACTAATGCTTGGTTGTaGTCACTGAACCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCTNAWL*SLNRVK
Trigger: CTTCACCCGGTTCAGTGACAACAACCAAGCATTAGT...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACATGCACTAATGCTTGGTaGTTGTCACTGAACCGGGTG +
Preference number: 5 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTCTNAW*LSLNRV
Trigger: CACCCGGTTCAGTGACAACAACCAAGCATTAGTGCA...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFTQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGCTGGTTAAAACATGTGTGTGCAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAATTGGTGACTGGAGTTaGAGCTCCACCTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: SWLKHVCAVGSVLWVGAAIGDWS*SSTCHE
Trigger: CTCATGACAGGTGGAGCTCAAACTCCAGTCACCAAT...TGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGTTTTAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GGACCAACTGCTTGTAGGCTCCTCCTAGAGAGGACTCATAGAGACACTTGCCCACACCTCCTCTTTCACTaGACTGGCCAGCCGATATTG +
Preference number: 5 (lower is better)
Translates to: GPTACRLLLERTHRDTCPHLLFH*TGQPIL
Trigger: CAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTG...TGGGCAAGTGTCTCTATGAGTCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCACTACTGCATGGGCTTaGAAGTCAGACACACTGATG +
Preference number: 5 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTTTAWA*KSDTLM
Trigger: CATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGT...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCCCGGACCCCAAGGATGAGTGAGGTCAGCACCCATGTGCCAAGAAAGGACAAATATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SRTPRMSEVSTHVPRKDKYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...TTTGTCCTTTCTTGGCACATGGGTGCTGACCTCACTCATCCTTGGGGTCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACGTAATATTCTCAGAGTaGACTGCCCCATTGGGAATG +
Preference number: 5 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDVIFSE*TAPLGM
Trigger: CATTCCCAATGGGGCAGTCAACTCTGAGAATATTAC...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAACAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGCCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: LRHASRRPRHCQSPALFQPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 5 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 90 bp ACAGCCCAAGAATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGACGCCCCAGGATCCTGTAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: TAQEYIIPGLLSSAG*NRLPKDAPGSCNPS
Trigger: GCTGGGATTACAGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATTCTTGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556589.5
ENST00000556860.1
ENST00000680030.1
CDS GCA 90 bp GGCAAGGGAGAAGTGATTAACTCATACCACCAAAAACACTGGGCATaGATCAGGCGGGCAGATACCTACCATGTGTGTGCAGTAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GKGEVINSYHQKHWA*IRRADTYHVCAVGS
Trigger: GCTGCCTACTGCACACACATGGTAGGTATCTGCCCGCCTGATGCATGCCCAGTGTTTTTGGTGGTATGAGTTAATCACTTCTCCCTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557688.1
CDS GCA 90 bp ACAGCCCAAGAATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGACGCCCCAGGATCCCTTTTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: TAQEYIIPGLLSSAG*NRLPKDAPGSLFLP
Trigger: AGGGAGGAAAAGGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATTCTTGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554525.1
CDS-3UTR CAA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACCAATCCCAGGAGACTTaGCAAGACCGGGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHQSQET*QDRGSR
Trigger: CCTGGATCCCCGGTCTTGCAAAGTCTCCTGGGATTG...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CACCAGTTTCCCAACAGGGCTGAGCCCCGTGTGCCATCTCCCTCAGCTACTGAGAACCACCATTCCAGGTaGAAAAATTTTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: HQFPNRAEPRVPSPSATENHHSR*KNFVVG
Trigger: CCCTACTACAAAATTTTTCAACCTGGAATGGTGGTT...CTCAGTAGCTGAGGGAGATGGCACACGGGGCTCAGCCCTGTTGGGAAACTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTCTTCTTCTTGAGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LFFLRAELMNGQGVIVLIISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...GATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCTCAAGAAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GGTCAGGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGCTCAAGGACATGGAATaGTTGGTGGGATTATCATAC +
Preference number: 5 (lower is better)
Translates to: GQAGTVAAQEGLFLMIPALKDME*LVGLSY
Trigger: GTATGATAATCCCACCAACAATTCCATGTCCTTGAG...CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGGAGCTCCACAGGAGGTaGAATGCCATCATCCACCAC +
Preference number: 5 (lower is better)
Translates to: RSAPMCQERTNDDCERLRELHRR*NAIIHH
Trigger: GTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTC...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAACAACAACCTCAAAGTTCTaGCTCCAATCTGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: NHSRRGPPQSRASSSWKTTTSKF*LQSEME
Trigger: CTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGT...TGTTTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR CAA 90 bp ACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGCGGACAACCTCAAAGTTCTaGCTCCAATCTGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: TCPRAVPQTHTFSGADERTTSKF*LQSEME
Trigger: CTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGT...CCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGTQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSTQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCCACCTCCTCTTTCACTaGACTGGCCAGCCGATATTG +
Preference number: 5 (lower is better)
Translates to: APMCQERTNDDCERLRSGHLLFH*TGQPIL
Trigger: CAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTG...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 5 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACACACTGATGTCTCCAGTCCCACACATCAGCAGCTCAAGCTCATTCTCATCAGAGTTGACTGCCCCATaGGGAATGGTAGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: DTLMSPVPHISSSSSFSSELTAP*GMVACS
Trigger: GCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTC...TGATGAGAATGAGCTTGAGCTGCTGATGTGTGGGACTGGAGACATCAGTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TATAGAGACCCTGATGCTGGATCCCGGACCCCAAGGATGAGTGAGGTCAGCACCGTAATATTCTCAGAGTaGACTGCCCCATTGGGAATG +
Preference number: 5 (lower is better)
Translates to: YRDPDAGSRTPRMSEVSTVIFSE*TAPLGM
Trigger: CATTCCCAATGGGGCAGTCAACTCTGAGAATATTAC...GGTGCTGACCTCACTCATCCTTGGGGTCCGGGATCCAGCATCAGGGTCTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ATGTGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: MWHGGSWGIETLMLDPGPVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...GGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTCGCAACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: LATLADGQLQHPVHLFIGVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...TCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGTTGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGATGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRCQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTGCAGCTCAGGAGGGCTaGTTCCTCATGATCCCTGCG +
Preference number: 5 (lower is better)
Translates to: FLCLSAAREHQAERESGIAAQEG*FLMIPA
Trigger: CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGC...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GCGCAGATGAGCGGGGCGATTAGGGTTGGGATGCACCTGTCCAAGAAAGAGATAGATAATGCTTGGTTGTaGTCACTGAACCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: AQMSGAIRVGMHLSKKEIDNAWL*SLNRVK
Trigger: CTTCACCCGGTTCAGTGACAACAACCAAGCATTATC...TATCTCTTTCTTGGACAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS TCA 90 bp TTGCGCACAGTGAAGGCCACTTTTACTACGTTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACTGGAATTTCCACTGCTAGCTCGACA +
Preference number: 5 (lower is better)
Translates to: LRTVKATFTTLELGS*RTSWVTGISTASST
Trigger: TGTCGAGCTAGCAGTGGAAATTCCAGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAACGTAGTAAAAGTGGCCTTCACTGTGCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000555330.5
ENST00000556202.5
ENST00000556589.5
ENST00000557401.5
ENST00000680030.1
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ATGCCTACCATTGTGCAGCGGGACTGCTCCTATGGGCCACCTCCTATCTGTCCCAACCACCATTCCAGGTaGAAAAATTTTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: MPTIVQRDCSYGPPPICPNHHSR*KNFVVG
Trigger: CCCTACTACAAAATTTTTCAACCTGGAATGGTGGTT...GGGACAGATAGGAGGTGGCCCATAGGAGCAGTCCCGCTGCACAATGGTAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TGGCATGGAGGATCCTGGGGTATAGAGACCCTGATGCTGGATCCCGGACCCCAAAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 5 (lower is better)
Translates to: WHGGSWGIETLMLDPGPQKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...TTGGGGTCCGGGATCCAGCATCAGGGTCTCTATACCCCAGGATCCTCCATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCTCAAGGACATGGAATaGTTGGTGGGATTATCATAC +
Preference number: 5 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCLKDME*LVGLSY
Trigger: GTATGATAATCCCACCAACAATTCCATGTCCTTGAG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGACCTGAAGTGGACACATaGCGTTCGACGATATTCTTC +
Preference number: 5 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRPEVDT*RSTIFF
Trigger: GAAGAATATCGTCGAACGCAATGTGTCCACTTCAGG...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AACCATTCCCGGCGAGGCCCTCCCCAGTCCAGAGCTTCTTCATCCTGGAAAACACAAGGTATGAAAATTTaGTTCCTGGACACACTCGGA +
Preference number: 5 (lower is better)
Translates to: NHSRRGPPQSRASSSWKTQGMKI*FLDTLG
Trigger: TCCGAGTGTGTCCAGGAACAAAATTTTCATACCTTG...TGTTTTCCAGGATGAAGAAGCTCTGGACTGGGGAGGGCCTCGCCGGGAATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481010.6
ENST00000681535.1
CDS-3UTR CAA 90 bp GACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCAATGGTGCCTAAGATGCCAAGGTATGAAAATTTaGTTCCTGGACACACTCGGA +
Preference number: 5 (lower is better)
Translates to: DHHRDAASLVGLQWCLRCQGMKI*FLDTLG
Trigger: TCCGAGTGTGTCCAGGAACAAAATTTTCATACCTTG...GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCCAAGGTATGAAAATTTaGTTCCTGGACACACTCGGA +
Preference number: 5 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCQGMKI*FLDTLG
Trigger: TCCGAGTGTGTCCAGGAACAAAATTTTCATACCTTG...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGCAGGAACTGTAGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: GRNCSSSGGLVPHDPCEQTFRVT*ECGLFI
Trigger: TATGAAAAGACCACATTCCAAAGTCACCCTGAAGGT...CTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCTACAGTTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGCCCCACTCTGGAACTAATGCTTGGTTGTaGTCACTGAACCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KASVVSKPAICLGMPHSGTNAWL*SLNRVK
Trigger: CTTCACCCGGTTCAGTGACAACAACCAAGCATTAGT...TCCAGAGTGGGGCATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAACTAATGCTTGGTTGTaGTCACTGAACCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRTNAWL*SLNRVK
Trigger: CTTCACCCGGTTCAGTGACAACAACCAAGCATTAGT...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATTGCACTAATGCTTGGTaGTTGTCACTGAACCGGGTG +
Preference number: 5 (lower is better)
Translates to: DKILQTQGSMRHLLADGYCTNAW*LSLNRV
Trigger: CACCCGGTTCAGTGACAACAACCAAGCATTAGTGCA...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGCAGAGGGAGTTTGCACTAATGCTTGGTaGTTGTCACTGAACCGGGTG +
Preference number: 5 (lower is better)
Translates to: SSSEGQRGCLQGVSAEGVCTNAW*LSLNRV
Trigger: CACCCGGTTCAGTGACAACAACCAAGCATTAGTGCA...AACTCCCTCTGCTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGCACTAATGCTTGGTaGTTGTCACTGAACCGGGTG +
Preference number: 5 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMCTNAW*LSLNRV
Trigger: CACCCGGTTCAGTGACAACAACCAAGCATTAGTGCA...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTATTGGTGACTGGAGTTaGAGCTCCACCTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCIGDWS*SSTCHE
Trigger: CTCATGACAGGTGGAGCTCAAACTCCAGTCACCAAT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATATTGGTGACTGGAGTTaGAGCTCCACCTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHIGDWS*SSTCHE
Trigger: CTCATGACAGGTGGAGCTCAAACTCCAGTCACCAAT...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 5 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCCTATGCCTACCATaGTGCAGCGGGACTGCTCCT +
Preference number: 5 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEGLCLP*CSGTAP
Trigger: AGGAGCAGTCCCGCTGCACAATGGTAGGCATAGGCC...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGACTGGTGCCTAAGGACCACCACAGGGATGCAGCTTCCCTGGTTGGGTTGCATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: KDWCLRTTTGMQLPWLGCIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...GCAACCCAACCAGGGAAGCTGCATCCCTGTGGTGGTCCTTAGGCACCAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACCCTCGCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATAGTAATATTCTCAGAGTaGACTGCCCCATTGGGAATG +
Preference number: 5 (lower is better)
Translates to: TLADGQLQHPVHLFIGVIVIFSE*TAPLGM
Trigger: CATTCCCAATGGGGCAGTCAACTCTGAGAATATTAC...TATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGCGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp CAGCCTCGAGAATGCAGGGTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGCAGGACTCTGTGTACTaGCTGGTTTTGGCAATAAAG +
Preference number: 5 (lower is better)
Translates to: QPRECRVSRKNTWKVCLLQDSVY*LVLAIK
Trigger: CTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTG...CAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCACCCTGCATTCTCGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATTGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: DKILQTQGSMRHLLADGYCQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: DGAKGSTGVGRCLLCNISQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...TGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGCAAGCAGCAGCACCTaGTCCTGGTCCCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEASSST*SWSLRR
Trigger: TCTCCTCAGGGACCAGGACAAGGTGCTGCTGCTTGC...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGAATCTGCAGCAGGGCTaGGTCTCTGCCAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMNLQQG*VSANFP
Trigger: TGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS TCA 90 bp ATTTTGTTCCTGGACACACTCGGAAGGTGTAAAGGCGCCAGGGGATaGTCTTCAGGTAGAACTCCTTCACTGAGAATTGCTTCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: ILFLDTLGRCKGARG*SSGRTPSLRIASQG
Trigger: CCCCTGAGAAGCAATTCTCAGTGAAGGAGTTCTACCTGAAGATCATCCCCTGGCGCCTTTACACCTTCCGAGTGTGTCCAGGAACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680030.1
CDS CCA 90 bp TGGAAGGGCAAGGGAGAAGTGATTAACTCATACCACCAAAAACACTaGGCATGCATCAGGCGGGCAGATACCTACCATGTGTGTGCAGTA +
Preference number: 5 (lower is better)
Translates to: WKGKGEVINSYHQKH*ACIRRADTYHVCAV
Trigger: TACTGCACACACATGGTAGGTATCTGCCCGCCTGATGCATGCCCAGTGTTTTTGGTGGTATGAGTTAATCACTTCTCCCTTGCCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557688.1
CDS-3UTR CAA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTTGGCCCCTTTCACCTaGTCTTCCAACTTCCACATG +
Preference number: 5 (lower is better)
Translates to: RSAPMCQERTNDDCERLRLAPFT*SSNFHM
Trigger: CATGTGGAAGTTGGAAGACAAGGTGAAAGGGGCCAA...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCCATATGCCTAGGCATGTTGGCCCCTTTCACCTaGTCTTCCAACTTCCACATG +
Preference number: 5 (lower is better)
Translates to: QTQGKASVVSKPAICLGMLAPFT*SSNFHM
Trigger: CATGTGGAAGTTGGAAGACAAGGTGAAAGGGGCCAA...CATGCCTAGGCATATGGCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCACCTGGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAAGTGGCACACAATTTaGGTCTTAGAAGGAACCACC +
Preference number: 5 (lower is better)
Translates to: FTWPDESAAGLGLCQFSRKWHTI*VLEGTT
Trigger: GGTGGTTCCTTCTAAGACCAAAATTGTGTGCCACTT...TCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCCAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATGAGTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: DTCPRAVPQTHTFSGADEWKVCL*DVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCA...CTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GCATGGTCCTCTTCTCATGACAGAATGAAGAGCTCAGCTTACATACCATGCCAAGAGCTCCACAGGAGGTaGAATGCCATCATCCACCAC +
Preference number: 5 (lower is better)
Translates to: AWSSSHDRMKSSAYIPCQELHRR*NAIIHH
Trigger: GTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTC...TTGGCATGGTATGTAAGCTGAGCTCTTCATTCTGTCATGAGAAGAGGACCATGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTGAGCTCCACAGGAGGTaGAATGCCATCATCCACCAC +
Preference number: 5 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIELHRR*NAIIHH
Trigger: GTGGTGGATGATGGCATTCAACCTCCTGTGGAGCTC...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GCGCAGATGAGCGGGGCGATTAGGGTTGGGATGCACCTGTCCAAGAAAGAGATAACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: AQMSGAIRVGMHLSKKEITFRVT*ECGLFI
Trigger: TATGAAAAGACCACATTCCAAAGTCACCCTGAAGGT...TATCTCTTTCTTGGACAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR CAA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGACTAATGCTTGGTTGTaGTCACTGAACCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQTNAWL*SLNRVK
Trigger: CTTCACCCGGTTCAGTGACAACAACCAAGCATTAGT...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGATTGGTGACTGGAGTTaGAGCTCCACCTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: RSAPMCQERTNDDCERLRIGDWS*SSTCHE
Trigger: CTCATGACAGGTGGAGCTCAAACTCCAGTCACCAAT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCATTGGTGACTGGAGTTaGAGCTCCACCTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGIGDWS*SSTCHE
Trigger: CTCATGACAGGTGGAGCTCAAACTCCAGTCACCAAT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGACTACTGCATGGGCTTaGAAGTCAGACACACTGATG +
Preference number: 5 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRTTAWA*KSDTLM
Trigger: CATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGT...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GCTTTTAGCAGACTACATAATGGGGAAGTCAGTGGCCCAAGCCGGCCATACTTCTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 5 (lower is better)
Translates to: AFSRLHNGEVSGPSRPYFSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...GAAGTATGGCCGGCTTGGGCCACTGACTTCCCCATTATGTAGTCTGCTAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GAAGAGCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGTCAGCAGAGGGAGTTTaGGAGCACAGTGTGGATTTA +
Preference number: 5 (lower is better)
Translates to: EELSLHTMPKWPVVDMGRSAEGV*EHSVDL
Trigger: TAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGA...CCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGGCCCAAGGGGCAGCATTATGTTTCCCAGGGTGGTGATAAACCTTCCGGTACAAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 5 (lower is better)
Translates to: GPKGQHYVSQGGDKPSGTRENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...TGTACCGGAAGGTTTATCACCACCCTGGGAAACATAATGCTGCCCCTTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCCAGGACTCTGTGTACTaGCTGGTTTTGGCAATAAAG +
Preference number: 5 (lower is better)
Translates to: GLTNLQQGLVSANFPETCQDSVY*LVLAIK
Trigger: CTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTG...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCCTTTGTCTTAGTGCTGCCAGAGAACACCAAGCAGAGAGAGAATCAGGGATTGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 5 (lower is better)
Translates to: FLCLSAAREHQAERESGIASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...AATCCCTGATTCTCTCTCTGCTTGGTGTTCTCTGGCAGCACTAAGACAAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGCAGCTCAGGAGGGCTTGTTCCTCATGATCCCTGCGAACAGGAGGGCTCAGACAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 5 (lower is better)
Translates to: SSSGGLVPHDPCEQEGSDRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...GTCTGAGCCCTCCTGTTCGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGGTCAGCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGAATCTGCAGCAGGGCTaGGTCTCTGCCAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: RSAPMCQERTNDDCERLRNLQQG*VSANFP
Trigger: TGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT...CCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGCTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACTTGGCCCCTTTCACCTaGTCTTCCAACTTCCACATG +
Preference number: 5 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHLAPFT*SSNFHM
Trigger: CATGTGGAAGTTGGAAGACAAGGTGAAAGGGGCCAA...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADTFRVT*ECGLFI
Trigger: TATGAAAAGACCACATTCCAAAGTCACCCTGAAGGT...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481010.6
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCACAACCTCAAAGTTCTaGCTCCAATCTGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: APMCQERTNDDCERLRSGTTSKF*LQSEME
Trigger: CTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATACAACCTCAAAGTTCTaGCTCCAATCTGAGATGGAG +
Preference number: 5 (lower is better)
Translates to: DKILQTQGSMRHLLADGYTTSKF*LQSEME
Trigger: CTCCATCTCAGATTGGAGCAAGAACTTTGAGGTTGT...ATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCACACCTCCTCTTTCACTaGACTGGCCAGCCGATATTG +
Preference number: 5 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPHLLFH*TGQPIL
Trigger: CAATATCGGCTGGCCAGTCAAGTGAAAGAGGAGGTG...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTCAGACATGCTTCCAGGAGGCCAAGGCATTGCCAAAGTCCTGCCTTGTTTCAGAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 5 (lower is better)
Translates to: LRHASRRPRHCQSPALFQRENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...CTGAAACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTGGAAGCATGTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAACAGGACTCTGTGTACTaGCTGGTTTTGGCAATAAAG +
Preference number: 5 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKQDSVY*LVLAIK
Trigger: CTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTG...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCCAGGAGGCCAAGGCATaGCCAAAGTCCTGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPQEAKA*PKSCLV
Trigger: AACAAGGCAGGACTTTGGCAATGCCTTGGCCTCCTG...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACGCAGCTCAGGAGGGCTaGTTCCTCATGATCCCTGCG +
Preference number: 5 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNAAQEG*FLMIPA
Trigger: CGCAGGGATCATGAGGAACAAGCCCTCCTGAGCTGC...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTCGACGATATCCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: KPQSKCSRLKWTHCVRRYPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...ATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 5 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLEASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATAATCTGCAGCAGGGCTaGGTCTCTGCCAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: GACGIFWLMVMCVRISGYNLQQG*VSANFP
Trigger: TGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 90 bp ACAGCCCAAGAATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGACGCCCCAGGATCATTTCAAAACCAA +
Preference number: 5 (lower is better)
Translates to: TAQEYIIPGLLSSAG*NRLPKDAPGSFQNQ
Trigger: TTGGTTTTGAAATGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATTCTTGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS CCA 90 bp TCCGAGTGGCTTTCAGAGACAGAGCCAAACATCACAAACACTTTCTaGACAGGAACCAAGCCTTCTCATTCCGATTCCAACAAGGCATGT +
Preference number: 5 (lower is better)
Translates to: SEWLSETEPNITNTF*TGTKPSHSDSNKAC
Trigger: ACATGCCTTGTTGGAATCGGAATGAGAAGGCTTGGTTCCTGTCCAGAAAGTGTTTGTGATGTTTGGCTCTGTCTCTGAAAGCCACTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR CAA 90 bp GTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCATTGGCCCCTTTCACCTaGTCTTCCAACTTCCACATG +
Preference number: 5 (lower is better)
Translates to: VSRKNTWKVCLLDVTDFSLAPFT*SSNFHM
Trigger: CATGTGGAAGTTGGAAGACAAGGTGAAAGGGGCCAA...TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp GCTCAGCTTACATACCATGCCAAAGTGGCCTGTGGTAGATATGGGCAGGGAGCAAACCACCATTCCAGGTaGAAAAATTTTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: AQLTYHAKVACGRYGQGANHHSR*KNFVVG
Trigger: CCCTACTACAAAATTTTTCAACCTGGAATGGTGGTT...TGCTCCCTGCCCATATCTACCACAGGCCACTTTGGCATGGTATGTAAGCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGATCTCGGGGTACTATTaGAAGGGTGTGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLISGYY*KGVRLP
Trigger: GGGCAGCCGCACACCCTTCAAATAGTACCCCGAGAT...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 5 (lower is better)
Translates to: GLTNLQQGLVSANFPETCKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGGATTATCATACTCATCTCGGGGTACTATTTGAAGGGTGTGCGGCTGCCCACACTCAAGGACATGGAATaGTTGGTGGGATTATCATAC +
Preference number: 5 (lower is better)
Translates to: GIIILISGYYLKGVRLPTLKDME*LVGLSY
Trigger: GTATGATAATCCCACCAACAATTCCATGTCCTTGAG...TGTGGGCAGCCGCACACCCTTCAAATAGTACCCCGAGATGAGTATGATAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAACTCAAGGACATGGAATaGTTGGTGGGATTATCATAC +
Preference number: 5 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKLKDME*LVGLSY
Trigger: GTATGATAATCCCACCAACAATTCCATGTCCTTGAG...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TACCAGTCTGGTCAAGTAGTGAGGGCCAAAGAGGGTGTCTCCAAGGAGTATCAGTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: YQSGQVVRAKEGVSKEYQWKVCL*DVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCA...CTGATACTCCTTGGAGACACCCTCTTTGGCCCTCACTACTTGACCAGACTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCAGTCTCTGGAAGGCTGCCGGAGGGGAGAATTCAGAAAAGCGACTGCCAAAAATGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: SVSGRLPEGRIQKSDCQKWKVCL*DVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCA...TTTTTGGCAGTCGCTTTTCTGAATTCTCCCCTCCGGCAGCCTTCCAGAGACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGAGCATGCGGCATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATCCTGAAGTGGACACATaGCGTTCGACGATATTCTTC +
Preference number: 5 (lower is better)
Translates to: GACGIFWLMVMCVRISGYPEVDT*RSTIFF
Trigger: GAAGAATATCGTCGAACGCAATGTGTCCACTTCAGG...ATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGATGCCGCATGCTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCTCAAATGAGACACCAGTACTCTCTTCTTCTTGAGGGCCGAGCTCATGAATGGCCTGAAGTGGACACATaGCGTTCGACGATATTCTTC +
Preference number: 5 (lower is better)
Translates to: SQMRHQYSLLLEGRAHEWPEVDT*RSTIFF
Trigger: GAAGAATATCGTCGAACGCAATGTGTCCACTTCAGG...CCATTCATGAGCTCGGCCCTCAAGAAGAAGAGAGTACTGGTGTCTCATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GAGAGGACTCATAGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCACTGAGAATTGCTTaGGTGACACATAGCAGTACA +
Preference number: 5 (lower is better)
Translates to: ERTHRDTCPRAVPQTHTFSLRIA*VTHSST
Trigger: TGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGA...AAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCTATGAGTCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp TTGAAGGGTGTGCGGCTGCCCACAGGTCAATACAAGAGTAGAAAAGTGGCACACCAAGGTATGAAAATTTaGTTCCTGGACACACTCGGA +
Preference number: 5 (lower is better)
Translates to: LKGVRLPTGQYKSRKVAHQGMKI*FLDTLG
Trigger: TCCGAGTGTGTCCAGGAACAAAATTTTCATACCTTG...GTGTGCCACTTTTCTACTCTTGTATTGACCTGTGGGCAGCCGCACACCCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp ACAAAATCCTCCAGACACAGGGGAGCATGCGGCATCTTCTGGCTGATGGTTATGCAAGGTATGAAAATTTaGTTCCTGGACACACTCGGA +
Preference number: 5 (lower is better)
Translates to: TKSSRHRGACGIFWLMVMQGMKI*FLDTLG
Trigger: TCCGAGTGTGTCCAGGAACAAAATTTTCATACCTTG...CATAACCATCAGCCAGAAGATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCTCAAATGAGACACCAGTACTCTCTTCTTCTTGAGGGCCGAGCTCATGAATGGACTACTGCATGGGCTTaGAAGTCAGACACACTGATG +
Preference number: 5 (lower is better)
Translates to: SQMRHQYSLLLEGRAHEWTTAWA*KSDTLM
Trigger: CATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGT...CCATTCATGAGCTCGGCCCTCAAGAAGAAGAGAGTACTGGTGTCTCATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp GCACCCATGTGCCAAGAAAGGACAAATGATGACTGCGAAAGACTGAGGTCAGGCAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 5 (lower is better)
Translates to: APMCQERTNDDCERLRSGRENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...GCCTGACCTCAGTCTTTCGCAGTCATCATTTGTCCTTTCTTGGCACATGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCTCCTTCCTGATAACTGATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: FSFLITDGAKGSTGVGRCIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...ACACCTGCCAACCCCTGTACTCCCCTTTGCTCCATCAGTTATCAGGAAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAGACAAGGCTTGTAGGTGACAAAATCCTCCAGACACAGGGGAGCATGCGGCATGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: KTRLVGDKILQTQGSMRHVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...ATGCCGCATGCTCCCCTGTGTCTGGAGGATTTTGTCACCTACAAGCCTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GGTGTCTTCTTCATGAATGTTTGGGCCAGGTGTCTTGAGTACTCATTCTCTCTGTTTGGGCCAGGTGTCTaGAGTACTCATTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: GVFFMNVWARCLEYSFSLFGPGV*STHSLW
Trigger: CCAGAGAGAATGAGTACTCAAGACACCTGGCCCAAA...CAGAGAGAATGAGTACTCAAGACACCTGGCCCAAACATTCATGAAGAAGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CAA 90 bp AGAGACACTTGCCCACGAGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATAGACCCTATTCCAGGTaGAAAAATTTTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: RDTCPRAVPQTHTFSGADRPYSR*KNFVVG
Trigger: CCCTACTACAAAATTTTTCAACCTGGAATAGGGTCT...ATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCTCGTGGGCAAGTGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS GCA 90 bp AATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGATCATTTCAAAACCAATCATGCCTTC +
Preference number: 5 (lower is better)
Translates to: NISFLDFSLVQGAID*QRTPQDHFKTNHAF
Trigger: GAAGGCATGATTGGTTTTGAAATGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp AGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATAAGTGGCACACAATTTaGGTCTTAGAAGGAACCACC +
Preference number: 5 (lower is better)
Translates to: RAELMNGQGVIVLISQGHKWHTI*VLEGTT
Trigger: GGTGGTTCCTTCTAAGACCAAAATTGTGTGCCACTT...ATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp ATCAGCAGAGGGAGTTTTGGAGCACAGTGTGGATTTAAGGGTCTCCACACCAGTTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: ISRGSFGAQCGFKGLHTSWKVCL*DVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCA...ACTGGTGTGGAGACCCTTAAATCCACACTGTGCTCCAAAACTCCCTCTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGWKVCL*DVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCA...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTCCTGAAGTGGACACATaGCGTTCGACGATATTCTTC +
Preference number: 5 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIPEVDT*RSTIFF
Trigger: GAAGAATATCGTCGAACGCAATGTGTCCACTTCAGG...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCTCACTGAGAATTGCTTaGGTGACACATAGCAGTACA +
Preference number: 5 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGSLRIA*VTHSST
Trigger: TGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGA...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCCCAGGGTGGTGATAAACCTTCCGGTACATATCCCATGGGAAAACATTTGGGCTCACTGAGAATTGCTTaGGTGACACATAGCAGTACA +
Preference number: 5 (lower is better)
Translates to: SQGGDKPSGTYPMGKHLGSLRIA*VTHSST
Trigger: TGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGA...GCCCAAATGTTTTCCCATGGGATATGTACCGGAAGGTTTATCACCACCCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTACTACTGCATGGGCTTaGAAGTCAGACACACTGATG +
Preference number: 5 (lower is better)
Translates to: QAGHTSVPITNSGKSISSTTAWA*KSDTLM
Trigger: CATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGT...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGGAGTTGACTGCCCCATaGGGAATGGTAGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FWLMVMCVRISGYDVCNLELTAP*GMVACS
Trigger: GCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTC...CAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ATGGAGCAAAGGGGAGTACAGGGGTTGGCAGGTGTTTACTGTGTAACATATCACCAGGACTCTGTGTACTaGCTGGTTTTGGCAATAAAG +
Preference number: 5 (lower is better)
Translates to: MEQRGVQGLAGVYCVTYHQDSVY*LVLAIK
Trigger: CTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTG...GTGATATGTTACACAGTAAACACCTGCCAACCCCTGTACTCCCCTTTGCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCATGCCAAAGTCCTGCCTaGTTTCAGGACTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPCQSPA*FQDSVY
Trigger: GTACACAGAGTCCTGAAACAAGGCAGGACTTTGGCA...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTCCCATGGGAAAACATTaGGGCAAGCAGCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIPMGKH*GKQQHL
Trigger: AAGGTGCTGCTGCTTGCCCAAATGTTTTCCCATGGG...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAATGAGACACCAGTACTCTCTGCTTCCCTGGTTGGGTaGCAATGGTGCCTAAGATGC +
Preference number: 5 (lower is better)
Translates to: KVCLLDVTDFSNETPVLSASLVG*QWCLRC
Trigger: GCATCTTAGGCACCATTGCAACCCAACCAGGGAAGC...AGAGAGTACTGGTGTCTCATTTGAGAAATCAGTAACATCCAACAGGCAGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS-3UTR CAA 90 bp GCTGATGGCCAGCTGCAGCATCCTGTGCACCTCTTCATAGGAGTCATATGTAGGAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 5 (lower is better)
Translates to: ADGQLQHPVHLFIGVICRRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...CCTACATATGACTCCTATGAAGAGGTGCACAGGATGCTGCAGCTGGCCATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555330.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GGCCTGACGAATCTGCAGCAGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 5 (lower is better)
Translates to: GLTNLQQGLVSANFPETCRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...GCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATTCGTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACTTGCGCCCAAATCTGCAGCAGGGCTaGGTCTCTGCCAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: LMVMCVRISGYDVCNLRPNLQQG*VSANFP
Trigger: TGGAAAATTGGCAGAGACCAAGCCCTGCTGCAGATT...TGGGCGCAAGTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS TCA 90 bp AGCAACATGGCAAAACCCTGTCTCTTTAAACGAGGGCCCATGTTCTaGGAACCAAGTAGAGCACTCCTATTCACCAAAGCAGGTAACTTT +
Preference number: 5 (lower is better)
Translates to: SNMAKPCLFKRGPMF*EPSRALLFTKAGNF
Trigger: AAAGTTACCTGCTTTGGTGAATAGGAGTGCTCTACTTGGTTCTCAGAACATGGGCCCTCGTTTAAAGAGACAGGGTTTTGCCATGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680030.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTCTCCAAGCCAGCAAGTGGCACACAATTTaGGTCTTAGAAGGAACCACC +
Preference number: 5 (lower is better)
Translates to: TSVPITNSGKSISSLQASKWHTI*VLEGTT
Trigger: GGTGGTTCCTTCTAAGACCAAAATTGTGTGCCACTT...GCTGGCTTGGAGACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAGGCAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 5 (lower is better)
Translates to: DRSSQDNQLNLQDQSLEGKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...GCCTTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AGGGCCGAGCTCATGAATGGACAAGGTGTAATTGTGCTCATCTCTCAAGGACATCTCAAGGACATGGAATaGTTGGTGGGATTATCATAC +
Preference number: 5 (lower is better)
Translates to: RAELMNGQGVIVLISQGHLKDME*LVGLSY
Trigger: GTATGATAATCCCACCAACAATTCCATGTCCTTGAG...ATGTCCTTGAGAGATGAGCACAATTACACCTTGTCCATTCATGAGCTCGGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTACGCAGTCCTATGATTaGGGCCAGGAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLTQSYD*GQERAG
Trigger: ACCCGCTCTTTCCTGGCCCAAATCATAGGACTGCGT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCTCCTTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: QVLFNHHSTVNLISFLPPYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...AGGAGGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 5 (lower is better)
Translates to: SHLFDILYLFPTLASMKARGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACGAGTTGACTGCCCCATaGGGAATGGTAGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: VYLLVLAIKMACNILRVDELTAP*GMVACS
Trigger: GCTGCAAGCTACCATTCCCAATGGGGCAGTCAACTC...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TTTCAGAGACAGAGCCAAACATCACAAACACTTTCTGGACAGGAACCAAGCCTTAGAGATAATGCTTGGTaGTTGTCACTGAACCGGGTG +
Preference number: 5 (lower is better)
Translates to: FQRQSQTSQTLSGQEPSLRDNAW*LSLNRV
Trigger: CACCCGGTTCAGTGACAACAACCAAGCATTATCTCT...AAGGCTTGGTTCCTGTCCAGAAAGTGTTTGTGATGTTTGGCTCTGTCTCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS-3UTR CAA 90 bp TATCCACAGCTGCTAGCTTGCAGGGTTGTTGTGAATGAGACAATAAATACTAAAAGTTCCAGGCTGCTTTaGCTGCTCTGCCTCACTGGT +
Preference number: 5 (lower is better)
Translates to: YPQLLACRVVVNETINTKSSRLL*LLCLTG
Trigger: ACCAGTGAGGCAGAGCAGCAAAAGCAGCCTGGAACT...TTTAGTATTTATTGTCTCATTCACAACAACCCTGCAAGCTAGCAGCTGTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CAA 90 bp ATTTCTCAAATGAGACACCAGTACTCTCTTCTTCTTGAGGGCCGAGCTCATGAAAAGTGGCACACAATTTaGGTCTTAGAAGGAACCACC +
Preference number: 5 (lower is better)
Translates to: ISQMRHQYSLLLEGRAHEKWHTI*VLEGTT
Trigger: GGTGGTTCCTTCTAAGACCAAAATTGTGTGCCACTT...TTCATGAGCTCGGCCCTCAAGAAGAAGAGAGTACTGGTGTCTCATTTGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp GCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCCTCCCAAGTGGCACACAATTTaGGTCTTAGAAGGAACCACC +
Preference number: 5 (lower is better)
Translates to: AAGTLQSSFNSEPNKLPPKWHTI*VLEGTT
Trigger: GGTGGTTCCTTCTAAGACCAAAATTGTGTGCCACTT...GGGAGGAAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCATATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SHLFDILYLFPTLASMKAYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTAGGGGAGTACAGGGGTaGGCAGGTGTTTACTGTGTA +
Preference number: 5 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLRGVQG*AGVYCV
Trigger: TACACAGTAAACACCTGCCAACCCCTGTACTCCCCT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CAAGCCGGCCATACTTCAGTGCCAATAACAAACTCAGGGAAAAGCATCAGTAGTATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: QAGHTSVPITNSGKSISSIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...ACTACTGATGCTTTTCCCTGAGTTTGTTATTGGCACTGAAGTATGGCCGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS TCA 90 bp CAACTCACTAATGCTTGGTTGTTGTCACTGAACCGGGTGAAGAGCTaGTTGGTGGTATCAAATAGTGCTTTGCAGATTAGCTCAAACCAT +
Preference number: 5 (lower is better)
Translates to: QLTNAWLLSLNRVKS*LVVSNSALQISSNH
Trigger: ATGGTTTGAGCTAATCTGCAAAGCACTATTTGATACCACCAATCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCATTAGTGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469797.5
ENST00000680030.1
CDS TCA 90 bp CTTAACTCAGTCTGTTACCTTACCTTTAAACGAGGGCCCATGTTCTaGGAACCAAGTAGAGCACTCCTATTCACCAAAGCAGGTAACTTT +
Preference number: 5 (lower is better)
Translates to: LNSVCYLTFKRGPMF*EPSRALLFTKAGNF
Trigger: AAAGTTACCTGCTTTGGTGAATAGGAGTGCTCTACTTGGTTCTCAGAACATGGGCCCTCGTTTAAAGGTAAGGTAACAGACTGAGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554525.1
CDS-3UTR CAA 90 bp GTGAGTCGCAAGAACACCTGGAAAGTCTGCCTGTTGGATGTTACTGATTTCTCAAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 5 (lower is better)
Translates to: VSRKNTWKVCLLDVTDFSKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCAGGTGTTCTTGCGACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp AGGGCTTGGTCTCTGCCAATTTTCCAGAAACATGCTGACACTCTCCTAGGTATTAAGGACATGGAATTGTaGGTGGGATTATCATACTCA +
Preference number: 5 (lower is better)
Translates to: RAWSLPIFQKHADTLLGIKDMEL*VGLSYS
Trigger: TGAGTATGATAATCCCACCAACAATTCCATGTCCTT...AATACCTAGGAGAGTGTCAGCATGTTTCTGGAAAATTGGCAGAGACCAAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCACCTGAAGTGGACACATaGCGTTCGACGATATTCTTC +
Preference number: 5 (lower is better)
Translates to: SHLFDILYLFPTLASMKAPEVDT*RSTIFF
Trigger: GAAGAATATCGTCGAACGCAATGTGTCCACTTCAGG...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAGATGGCTTGTAATATTCTCAGAGTTGACTGCCCCATTGGGAATGGTAGCTTGTCACTGAGAATTGCTTaGGTGACACATAGCAGTACA +
Preference number: 5 (lower is better)
Translates to: KMACNILRVDCPIGNGSLSLRIA*VTHSST
Trigger: TGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGA...CAAGCTACCATTCCCAATGGGGCAGTCAACTCTGAGAATATTACAAGCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLTFRVT*ECGLFI
Trigger: TATGAAAAGACCACATTCCAAAGTCACCCTGAAGGT...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GTTGTGAATGAGACAATAAATACTAAAGCTCCTAGCATATGGGAAGAGAGGATCTATGATGTCTGTAACTaGCGCCCAGAAGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: VVNETINTKAPSIWEERIYDVCN*RPEAPE
Trigger: CTCTGGAGCTTCTGGGCGCAAGTTACAGACATCATA...GATCCTCTCTTCCCATATGCTAGGAGCTTTAGTATTTATTGTCTCATTCACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554070.1
CDS-3UTR CAA 90 bp AATGACAGGTCTAGCCAAGACAATCAACTCAATCTCCAGGATCAGTCTCTGGAAAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 5 (lower is better)
Translates to: NDRSSQDNQLNLQDQSLERENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...TTCCAGAGACTGATCCTGGAGATTGAGTTGATTGTCTTGGCTAGACCTGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CAAATGAGACACCAGTACTCTCTTCTTCTTGAGGGCCGAGCTCATGAATGGACAAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 5 (lower is better)
Translates to: QMRHQYSLLLEGRAHEWTRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...TGTCCATTCATGAGCTCGGCCCTCAAGAAGAAGAGAGTACTGGTGTCTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS GCA 90 bp TACACGTGCGGCAAGCTCAAAGAGGAACTTAATTGTGAAGAAGAATaGAACCACAGACACTGTGATTCCACCAATAACGTAAAACATCAG +
Preference number: 5 (lower is better)
Translates to: YTCGKLKEELNCEEE*NHRHCDSTNNVKHQ
Trigger: CTGATGTTTTACGTTATTGGTGGAATCACAGTGTCTGTGGTTGCATTCTTCTTCACAATTAAGTTCCTCTTTGAGCTTGCCGCACGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000553279.5
ENST00000555249.1
ENST00000555330.5
ENST00000557401.5
ENST00000680030.1
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CTGGAGGCTACAGCTCAGCTATCCTTCATATTCTTCAGTCTATCTGCTTTTCTCAACCACCATTCCAGGTaGAAAAATTTTGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: LEATAQLSFIFFSLSAFLNHHSR*KNFVVG
Trigger: CCCTACTACAAAATTTTTCAACCTGGAATGGTGGTT...GAGAAAAGCAGATAGACTGAAGAATATGAAGGATAGCTGAGCTGTAGCCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTACTACTGCATGGGCTTaGAAGTCAGACACACTGATG +
Preference number: 5 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLTTAWA*KSDTLM
Trigger: CATCAGTGTGTCTGACTTCAAAGCCCATGCAGTAGT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACTGCCCCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: TAPLGMVACSKAFLKTQIIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...AATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGGGGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACGTAATATTCTCAGAGTaGACTGCCCCATTGGGAATG +
Preference number: 5 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNVIFSE*TAPLGM
Trigger: CATTCCCAATGGGGCAGTCAACTCTGAGAATATTAC...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ACTCTCCTAGGTATTCACTCATGTCTGGTCTCCTTCAAAGACGCTAAAAGGCCAAGAGCAAAGATACTTTaGAATAGAGTTCAGACAGAG +
Preference number: 5 (lower is better)
Translates to: TLLGIHSCLVSFKDAKRPRAKIL*NRVQTE
Trigger: CTCTGTCTGAACTCTATTCAAAAGTATCTTTGCTCT...TGGCCTTTTAGCGTCTTTGAAGGAGACCAGACATGAGTGAATACCTAGGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACAAGTGGCACACAATTTaGGTCTTAGAAGGAACCACC +
Preference number: 5 (lower is better)
Translates to: VYLLVLAIKMACNILRVDKWHTI*VLEGTT
Trigger: GGTGGTTCCTTCTAAGACCAAAATTGTGTGCCACTT...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCACTCAAGGACATGGAATaGTTGGTGGGATTATCATAC +
Preference number: 5 (lower is better)
Translates to: SHLFDILYLFPTLASMKALKDME*LVGLSY
Trigger: GTATGATAATCCCACCAACAATTCCATGTCCTTGAG...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TATAAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTGCGTTTGGAAAGTCTGCCTGTaGGATGTTACTGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: YKDKPQSKCSRLKWTHCVWKVCL*DVTDFS
Trigger: TGAGAAATCAGTAACATCCAACAGGCAGACTTTCCA...AACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553279.5
ENST00000681535.1
CDS-3UTR CAA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACCAAGGTATGAAAATTTaGTTCCTGGACACACTCGGA +
Preference number: 5 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNQGMKI*FLDTLG
Trigger: TCCGAGTGTGTCCAGGAACAAAATTTTCATACCTTG...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTCAACACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: DVVIFQDTAAGTLQSSFNTFRVT*ECGLFI
Trigger: TATGAAAAGACCACATTCCAAAGTCACCCTGAAGGT...GTTGAATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp TCTCATCTCTTTGACATATTGTACCTTTTCCCCACACTGGCTAGTATGAAAGCAACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: SHLFDILYLFPTLASMKATFRVT*ECGLFI
Trigger: TATGAAAAGACCACATTCCAAAGTCACCCTGAAGGT...TGCTTTCATACTAGCCAGTGTGGGGAAAAGGTACAATATGTCAAAGAGATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp CCATTGGGAATGGTAGCTTGCAGCAAAGCCTTCTTAAAAACACAAATTTGGGAAATTGGGAATGGTAGCTaGCAGCAAAGCCTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: PLGMVACSKAFLKTQIWEIGNGS*QQSLLK
Trigger: TTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAAT...TTCCCAAATTTGTGTTTTTAAGAAGGCTTTGCTGCAAGCTACCATTCCCAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GTGTACTTGCTGGTTTTGGCAATAAAGATGGCTTGTAATATTCTCAGAGTTGACGTAATATTCTCAGAGTaGACTGCCCCATTGGGAATG +
Preference number: 5 (lower is better)
Translates to: VYLLVLAIKMACNILRVDVIFSE*TAPLGM
Trigger: CATTCCCAATGGGGCAGTCAACTCTGAGAATATTAC...GTCAACTCTGAGAATATTACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp ATCTTCTGGCTGATGGTTATGTGTGTTAGGATCAGTGGTTATGATGTCTGTAACGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: IFWLMVMCVRISGYDVCNVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...GTTACAGACATCATAACCACTGATCCTAACACACATAACCATCAGCCAGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTCAGGACTCTGTGTACTaGCTGGTTTTGGCAATAAAG +
Preference number: 5 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLQDSVY*LVLAIK
Trigger: CTTTATTGCCAAAACCAGCAAGTACACAGAGTCCTG...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 90 bp AAAGATAAGCCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTaGGTTCGACGATATTCTTCTCATCCTCTGAAGTATAATAAGGAA +
Preference number: 5 (lower is better)
Translates to: KDKPQSKCSRLKWTH*VRRYSSHPLKYNKE
Trigger: TTCCTTATTATACTTCAGAGGATGAGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGGCTTATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556327.5
CDS-3UTR CAA 90 bp GATACAGCAGCAGGTACTCTTCAATCATCATTCAACAGTGAACCTAATAAGCTTAGAGAGAATCAGGGATaGCTGGCATACTATTCTTAC +
Preference number: 5 (lower is better)
Translates to: DTAAGTLQSSFNSEPNKLRENQG*LAYYSY
Trigger: GTAAGAATAGTATGCCAGCAATCCCTGATTCTCTCT...AAGCTTATTAGGTTCACTGTTGAATGATGATTGAAGAGTACCTGCTGCTGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS-3UTR CAA 90 bp AAAGGATGTTGTCATCTTCCAAGATACAGCAGCAGGTACTCTTCAATCATCATTGTGTACTTGCTGGTTTaGGCAATAAAGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: KGCCHLPRYSSRYSSIIIVYLLV*AIKMAC
Trigger: ACAAGCCATCTTTATTGCCAAAACCAGCAAGTACAC...AATGATGATTGAAGAGTACCTGCTGCTGTATCTTGGAAGATGACAACATCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356357.9
ENST00000555330.5
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS CCA 72 bp GGGTTGCAGCGCGACGAAGTTCCACCTCCGCTGTCCTaGGAAGGGGCGGCAGCACTCAGCAGAAGACGGGCT +
Preference number: 6 (lower is better)
Translates to: GLQRDEVPPPLS*EGAAALSRRRA
Trigger: AGCCCGTCTTCTGCTGAGTGCTGCCGCCCCTTCCCAGGACAGCGGAGGTGGAACTTCGTCGCGCTGCAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000555249.1
ENST00000556202.5
ENST00000556589.5
ENST00000556860.1
ENST00000557401.5
ENST00000680030.1
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS CAA 72 bp GGCAAGTCCCTTCTGCCTATGACCCCGAGCCGGGGGTaGCAGCGCGACGAAGTTCCACCTCCGCTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GKSLLPMTPSRG*QRDEVPPPLSW
Trigger: CCAGGACAGCGGAGGTGGAACTTCGTCGCGCTGCAACCCCCGGCTCGGGGTCATAGGCAGAAGGGACTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556860.1
ENST00000681535.1
CDS GCA 72 bp TGGTCTCCACCCGGCCTGGGAACCGGCTCGGGGGATTaGCCTTTCCCCAAGGAGTTTCCGCTTCCGGGCTAT +
Preference number: 6 (lower is better)
Translates to: WSPPGLGTGSGD*PFPKEFPLPGY
Trigger: ATAGCCCGGAAGCGGAAACTCCTTGGGGAAAGGGCAATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS CAA 72 bp TTGGTCTCCACCCGGCCTGGGAACCGGCTCGGGGGATaGCCCTTTCCCCAAGGAGTTTCCGCTTCCGGGCTA +
Preference number: 6 (lower is better)
Translates to: LVSTRPGNRLGG*PFPQGVSASGL
Trigger: TAGCCCGGAAGCGGAAACTCCTTGGGGAAAGGGCAATCCCCCGAGCCGGTTCCCAGGCCGGGTGGAGACCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS GCA 72 bp TTCCTGGACTTCTCTCTAGTGCAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGATCCCGAGCCGGGGGTT +
Preference number: 6 (lower is better)
Translates to: FLDFSLVQGAID*QRTPQDPEPGV
Trigger: AACCCCCGGCTCGGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000556202.5
ENST00000557401.5
ENST00000681099.1
ENST00000681599.1
CDS CCA 72 bp ATAGTCCGGTCCCCTCGGCGCTCGCGGTCCTCATTCTaGAGGAAGCTGACTACACGTGCGGCAAGCTCAAAG +
Preference number: 6 (lower is better)
Translates to: IVRSPRRSRSSF*RKLTTRAASSK
Trigger: CTTTGAGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGAGCGCCGAGGGGACCGGACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000553279.5
ENST00000555249.1
ENST00000555330.5
ENST00000557401.5
ENST00000680030.1
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 72 bp GGCATGCATCAGGCGGGCAGATACCTACCATGTGTGTaGAGTAGGCAGCGTGCTATGGGTCGGAGCGGCAAT +
Preference number: 6 (lower is better)
Translates to: GMHQAGRYLPCV*SRQRAMGRSGN
Trigger: ATTGCCGCTCCGACCCATAGCACGCTGCCTACTGCACACACATGGTAGGTATCTGCCCGCCTGATGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557688.1
CDS GCA 72 bp TTCCTGGACTTCTCTCTAGTGCAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGATCCCTTTTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: FLDFSLVQGAID*QRTPQDPFSSL
Trigger: GAGGGAGGAAAAGGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554525.1
CDS TCA 72 bp AGCCGTCCCGCAAACTCATACATTTTCAGGCGCAGATaGGCGGGGCGATTAGGGTTGGGATGCACCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SRPANSYIFRRR*AGRLGLGCTFF
Trigger: GAAGAAGGTGCATCCCAACCCTAATCGCCCCGCTCATCTGCGCCTGAAAATGTATGAGTTTGCGGGACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555330.5
CDS GCA 72 bp TTCCTGGACTTCTCTCTAGTGCAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGATCCTGTAATCCCAGCA +
Preference number: 6 (lower is better)
Translates to: FLDFSLVQGAID*QRTPQDPVIPA
Trigger: TGCTGGGATTACAGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556589.5
ENST00000556860.1
ENST00000680030.1
CDS GCA 72 bp GCCCGTTCTTATAGAATAAATGCACTCGGAAGGCCATaGTGTGGCCCACCTCATAGGGGTCCTTCCAATCCC +
Preference number: 6 (lower is better)
Translates to: ARSYRINALGRP*CGPPHRGPSNP
Trigger: GGGATTGGAAGGACCCCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGCATTTATTCTATAAGAACGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000555249.1
ENST00000555330.5
ENST00000557401.5
ENST00000680030.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 72 bp GAATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGACGCCCCAGGATCCCGA +
Preference number: 6 (lower is better)
Translates to: EYIIPGLLSSAG*NRLPKDAPGSR
Trigger: TCGGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000556202.5
ENST00000557401.5
ENST00000681099.1
ENST00000681599.1
CDS GCA 72 bp GAATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGACGCCCCAGGATCCTGT +
Preference number: 6 (lower is better)
Translates to: EYIIPGLLSSAG*NRLPKDAPGSC
Trigger: ACAGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556589.5
ENST00000556860.1
ENST00000680030.1
CDS GCA 72 bp GAATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGACGCCCCAGGATCCCTT +
Preference number: 6 (lower is better)
Translates to: EYIIPGLLSSAG*NRLPKDAPGSL
Trigger: AAGGGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554525.1
CDS CAA 90 bp CATTCCGATTCCAACAAGGCATGTCTGCTGACCTTCAGGGTGACTTaGGAATGTGGTCTTTTCATATGTACCTGCCGAAGCTCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: HSDSNKACLLTFRVT*ECGLFICTCRSSRW
Trigger: CCAGCGAGAGCTTCGGCAGGTACATATGAAAAGACCACATTCCAAAGTCACCCTGAAGGTCAGCAGACATGCCTTGTTGGAATCGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS TCA 72 bp GTGAAGGCCACTTTTACTACGTTGGAATTGGGCTCCTaGAGGACTTCCTGGGTCACTGGAATTTCCACTGCT +
Preference number: 6 (lower is better)
Translates to: VKATFTTLELGS*RTSWVTGISTA
Trigger: AGCAGTGGAAATTCCAGTGACCCAGGAAGTCCTTCAGGAGCCCAATTCCAACGTAGTAAAAGTGGCCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000555330.5
ENST00000556202.5
ENST00000556589.5
ENST00000557401.5
ENST00000680030.1
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 72 bp CTCGCGGTCCTCATTCTGGAGGAAGCTGACTACACGTaGGGCAAGCTCAAAGAGGAACTTAATTGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: LAVLILEEADYT*GKLKEELNCEE
Trigger: TTCTTCACAATTAAGTTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTCCTCCAGAATGAGGACCGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000553279.5
ENST00000555249.1
ENST00000555330.5
ENST00000557401.5
ENST00000680030.1
ENST00000681099.1
ENST00000681535.1
ENST00000681599.1
CDS GCA 72 bp TTCCTGGACTTCTCTCTAGTGCAGGGTGCAATCGACTaGCAAAGGACGCCCCAGGATCATTTCAAAACCAAT +
Preference number: 6 (lower is better)
Translates to: FLDFSLVQGAID*QRTPQDHFKTN
Trigger: ATTGGTTTTGAAATGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS TCA 72 bp GATCACAGCTGCAGCTTTAAACGAGGGCCCATGTTCTaGGAACCAAGTAGAGCACTCCTATTCACCAAAGCA +
Preference number: 6 (lower is better)
Translates to: DHSCSFKRGPMF*EPSRALLFTKA
Trigger: TGCTTTGGTGAATAGGAGTGCTCTACTTGGTTCTCAGAACATGGGCCCTCGTTTAAAGCTGCAGCTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356357.9
ENST00000469797.5
ENST00000556202.5
ENST00000556589.5
ENST00000557401.5
ENST00000681099.1
ENST00000681535.1
CDS GCA 72 bp GAAGTGATTAACTCATACCACCAAAAACACTGGGCATaGATCAGGCGGGCAGATACCTACCATGTGTGTGCA +
Preference number: 6 (lower is better)
Translates to: EVINSYHQKHWA*IRRADTYHVCA
Trigger: TGCACACACATGGTAGGTATCTGCCCGCCTGATGCATGCCCAGTGTTTTTGGTGGTATGAGTTAATCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557688.1
CDS GCA 72 bp GAATATATCATTCCTGGACTTCTCTCTAGTGCAGGGTaGAATCGACTGCCAAAGGACGCCCCAGGATCATTT +
Preference number: 6 (lower is better)
Translates to: EYIIPGLLSSAG*NRLPKDAPGSF
Trigger: AAATGATCCTGGGGCGTCCTTTGGCAGTCGATTGCACCCTGCACTAGAGAGAAGTCCAGGAATGATATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681535.1
CDS CCA 72 bp AAGGGAGAAGTGATTAACTCATACCACCAAAAACACTaGGCATGCATCAGGCGGGCAGATACCTACCATGTG +
Preference number: 6 (lower is better)
Translates to: KGEVINSYHQKH*ACIRRADTYHV
Trigger: CACATGGTAGGTATCTGCCCGCCTGATGCATGCCCAGTGTTTTTGGTGGTATGAGTTAATCACTTCTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557688.1
CDS CCA 72 bp GAGCAGTATTTTTGTTTGCCACTCCCAAACCCCTTGTaGGTGAGGGAGATGTTGGGAGACAAATGTGTGCTT +
Preference number: 6 (lower is better)
Translates to: EQYFCLPLPNPL*VREMLGDKCVL
Trigger: AAGCACACATTTGTCTCCCAACATCTCCCTCACCCACAAGGGGTTTGGGAGTGGCAAACAAAAATACTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557401.5
CDS TCA 72 bp GCAAAACCCTGTCTCTTTAAACGAGGGCCCATGTTCTaGGAACCAAGTAGAGCACTCCTATTCACCAAAGCA +
Preference number: 6 (lower is better)
Translates to: AKPCLFKRGPMF*EPSRALLFTKA
Trigger: TGCTTTGGTGAATAGGAGTGCTCTACTTGGTTCTCAGAACATGGGCCCTCGTTTAAAGAGACAGGGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680030.1
ENST00000681599.1
CDS TCA 72 bp GTCTGTTACCTTACCTTTAAACGAGGGCCCATGTTCTaGGAACCAAGTAGAGCACTCCTATTCACCAAAGCA +
Preference number: 6 (lower is better)
Translates to: VCYLTFKRGPMF*EPSRALLFTKA
Trigger: TGCTTTGGTGAATAGGAGTGCTCTACTTGGTTCTCAGAACATGGGCCCTCGTTTAAAGGTAAGGTAACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554525.1
CDS CCA 72 bp CTTTCAGAGACAGAGCCAAACATCACAAACACTTTCTaGACAGGAACCAAGCCTTCTCATTCCGATTCCAAC +
Preference number: 6 (lower is better)
Translates to: LSETEPNITNTF*TGTKPSHSDSN
Trigger: GTTGGAATCGGAATGAGAAGGCTTGGTTCCTGTCCAGAAAGTGTTTGTGATGTTTGGCTCTGTCTCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481010.6
CDS GCA 72 bp CCTCAAAGTAAATGCTCACGCCTGAAGTGGACACATTaGGTTCGACGATATTCTTCTCATCCTCTGAAGTAT +
Preference number: 6 (lower is better)
Translates to: PQSKCSRLKWTH*VRRYSSHPLKY
Trigger: ATACTTCAGAGGATGAGAAGAATATCGTCGAACGCAATGTGTCCACTTCAGGCGTGAGCATTTACTTTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556327.5
CDS CAA 72 bp TTGCCACTCCCAAACCCCTTGTGGGTGAGGGAGATGTaGGGAGACAAATGTGTGCTTAAATATGAAAATCAA +
Preference number: 6 (lower is better)
Translates to: LPLPNPLWVREM*GDKCVLKYENQ
Trigger: TTGATTTTCATATTTAAGCACACATTTGTCTCCCAACATCTCCCTCACCCACAAGGGGTTTGGGAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557401.5
CDS CAA 90 bp CAGAACTTCTTTCAGCCAAAGTGTACTTCTCTACTCCTGACACCTTaGTCTAGACAAAGATCTAGTACAGGAATCATTTGCTTCAGGTAT +
Preference number: 6 (lower is better)
Translates to: QNFFQPKCTSLLLTP*SRQRSSTGIICFRY
Trigger: ATACCTGAAGCAAATGATTCCTGTACTAGATCTTTGTCTAGACAAAGGTGTCAGGAGTAGAGAAGTACACTTTGGCTGAAAGAAGTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680030.1
CDS TCA 72 bp AGAACTTCTTTCAGCCAAAGTGTACTTCTCTACTCCTaGCACCTTTGTCTAGACAAAGATCTAGTACAGGAA +
Preference number: 6 (lower is better)
Translates to: RTSFSQSVLLYS*HLCLDKDLVQE
Trigger: TTCCTGTACTAGATCTTTGTCTAGACAAAGGTGTCAGGAGTAGAGAAGTACACTTTGGCTGAAAGAAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680030.1
CDS TCA 72 bp TCTTATATTAAGTTTGTGGTTAATCAGCAGATGATGTaGTGCCTTTTCCCTAAACCAGAACTTCTTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SYIKFVVNQQMM*CLFPKPELLSA
Trigger: GGCTGAAAGAAGTTCTGGTTTAGGGAAAAGGCATCACATCATCTGCTGATTAACCACAAACTTAATATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680030.1