RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARCN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000095139

Ensembl transcript IDs: ENST00000264028.5, ENST00000359415.8, ENST00000392859.7, ENST00000534182.2, ENST00000614498.4

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTaGAGCCTTGCAGCAACTTTTAACCACCCCTATGGACTGGAATAT +
Preference number: 1 (lower is better)
Translates to: VQKSSSRLPLPTASA*SLAATFNHPYGLEY
Trigger: ATATTCCAGTCCATAGGGGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR GCA 90 bp AACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTaGTCTGCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGAT +
Preference number: 1 (lower is better)
Translates to: NFFGKQFHTQPFMCE*SASSTVHSLQGRPD
Trigger: ATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR TCA 90 bp AGCCTCCTTGATAGTTTAGGGCCAACAGGATTGGCAAAGACTCCCTaGACCCACAGCCTTCAAAATCATAACCCCATTTCTGTTAGAAAG +
Preference number: 1 (lower is better)
Translates to: SLLDSLGPTGLAKTP*THSLQNHNPISVRK
Trigger: CTTTCTAACAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATCCTGTTGGCCCTAAACTATCAAGGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR GCA 90 bp GGGGCATTCTCTGGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTaGCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTGCCATTT +
Preference number: 1 (lower is better)
Translates to: GAFSGELAFLLANTI*QRKLAAFPFMFVPF
Trigger: AAATGGCACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCCAGAGAATGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR GCA 90 bp GACAAACAACTTTCAAACAAAACTGGATTAGTAGGATTTCTTGCCTaGTTAACTAACATGACAGACTTCTTGTCCCAAGCCCTTCTCAGA +
Preference number: 1 (lower is better)
Translates to: DKQLSNKTGLVGFLA*LTNMTDFLSQALLR
Trigger: TCTGAGAAGGGCTTGGGACAAGAAGTCTGTCATGTTAGTTAAGCAGGCAAGAAATCCTACTAATCCAGTTTTGTTTGAAAGTTGTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR GCA 90 bp GAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGCTGAGGTGGGCGGATTaGCTGAGCTCAGGAGTTCGC +
Preference number: 2 (lower is better)
Translates to: ECSASSTVHSLQGRPDVQLRWAD*LSSGVR
Trigger: GCGAACTCCTGAGCTCAGGCAATCCGCCCACCTCAG...CTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR GCA 90 bp GGCCAGATGTTCAGAGTGGGAGTGGTACTTTTCAACCAGCTAAAAGTGCAGAAGCTGAGGTGGGCGGATTaGCTGAGCTCAGGAGTTCGC +
Preference number: 2 (lower is better)
Translates to: GQMFRVGVVLFNQLKVQKLRWAD*LSSGVR
Trigger: GCGAACTCCTGAGCTCAGGCAATCCGCCCACCTCAG...CTTCTGCACTTTTAGCTGGTTGAAAAGTACCACTCCCACTCTGAACATCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR CCA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTACTGGGGGCATTCTCTaGAGAGCTTGCTTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSTGGIL*RACFPA
Trigger: AGCAGGAAAGCAAGCTCTCCAGAGAATGCCCCCAGT...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR TCA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTACTGAAACATGGGGGTaGGTCGAGGGTCCTTGCGCG +
Preference number: 2 (lower is better)
Translates to: WNIELKAKAELADAVVSITETWG*VEGPCA
Trigger: CGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGT...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR TCA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTAGGGACTGTGCCATTTaGAAGGTGCTTCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSRDCAI*KVLLSY
Trigger: ATAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCT...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR GCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTCTTCCCACTGCCAGTaGCTGCAGCCTTGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: STHSHLCVSALLQAQYTLSSHCQ*LQPCSN
Trigger: GTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGA...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGACTGGGGGCATTCTCTaGAGAGCTTGCTTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRTGGIL*RACFPA
Trigger: AGCAGGAAAGCAAGCTCTCCAGAGAATGCCCCCAGT...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR TCA 90 bp TTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGACTGAAACATGGGGGTaGGTCGAGGGTCCTTGCGCG +
Preference number: 2 (lower is better)
Translates to: FLLANTICQRKLAAFPFMTETWG*VEGPCA
Trigger: CGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGT...CATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
3UTR-3UTR GCA 90 bp GAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGAGAGCTTGCTTTCCTaGTGGCCAATACAATCTGCC +
Preference number: 2 (lower is better)
Translates to: EGFQRWGQTGGKCWADWKESLLS*WPIQSA
Trigger: GGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTC...CTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR TCA 90 bp CCTCTTCCCACTGCCAGTGCCTGCAGCCTTGCAGCAACTTTTAACCACCCCTATAACTTGGCAAAGAGATaGAGGAATGAATTGATACGG +
Preference number: 2 (lower is better)
Translates to: PLPTASACSLAATFNHPYNLAKR*RNELIR
Trigger: CCGTATCAATTCATTCCTTCATCTCTTTGCCAAGTT...ATAGGGGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
3UTR-3UTR GCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTAGTCATCTAGTCGTCTaGCTCTTCCCACTGCCAGTG +
Preference number: 2 (lower is better)
Translates to: STHSHLCVSALLQAQYTLSHLVV*LFPLPV
Trigger: CACTGGCAGTGGGAAGAGGCAGACGACTAGATGACT...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CCA 90 bp CACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGGAGGAGGTATTTAACTaGGGGCATTCTCTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: HSHLCVSALLQAQYTLCREEVFN*GHSLES
Trigger: GCTCTCCAGAGAATGCCCCCAGTTAAATACCTCCTC...CCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR TCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGGAAGGACAGGCCCTaGAAGGAAAACAACTTGGCA +
Preference number: 2 (lower is better)
Translates to: STHSHLCVSALLQAQYTLWKDRP*KENNLA
Trigger: TGCCAAGTTGTTTTCCTTTCAGGGCCTGTCCTTCCA...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
3UTR-3UTR TCA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGAGGGACTGTGCCATTTaGAAGGTGCTTCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: KAELADAVVSIEKEMDEMRDCAI*KVLLSY
Trigger: ATAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCT...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR GCA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGGAGAGCTTGCTTTCCTaGTGGCCAATACAATCTGCC +
Preference number: 2 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKESLLS*WPIQSA
Trigger: GGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTC...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR GCA 90 bp CTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGTTAGAAAGGAGGCTGAGATCATGCCATTaGATTCCAGCCTGGGTTACA +
Preference number: 2 (lower is better)
Translates to: LPEPTAFKIITPFLLERRLRSCH*IPAWVT
Trigger: TGTAACCCAGGCTGGAATGCAATGGCATGATCTCAG...CCTCCTTTCTAACAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR CCA 90 bp CAACAGGATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCAAGCTTGCTTTCCTGCTaGCCAATACAATCTGCCAAA +
Preference number: 2 (lower is better)
Translates to: QQDWQRLPEPTAFKIITPSLLSC*PIQSAK
Trigger: TTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCT...TGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATCCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR GCA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACACTGGCCAATACAATCTaGCAAAGAAAATTAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GKQFHTQPFMCECSASSTLANTI*QRKLAA
Trigger: GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAG...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR CCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTAGGAAATGGATGAGATaGAACCGAGAAACCACCAGT +
Preference number: 2 (lower is better)
Translates to: STHSHLCVSALLQAQYTLRKWMR*NRETTS
Trigger: ACTGGTGGTTTCTCGGTTCCATCTCATCCATTTCCT...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR TCA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTATGCCTGTAAACAGATaGTCCCAGTGCCTGACTGAA +
Preference number: 2 (lower is better)
Translates to: RLETSLASNSTHSHLCVSMPVNR*SQCLTE
Trigger: TTCAGTCAGGCACTGGGATCATCTGTTTACAGGCAT...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
3UTR-3UTR TCA 90 bp TCCCAAGCCCTTCTCAGAAAAACCTCATGTGGAAACCAAGCTAGAGATAAGAATAGGGACTGTGCCATTTaGAAGGTGCTTCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: SQALLRKTSCGNQARDKNRDCAI*KVLLSY
Trigger: ATAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCT...ATTCTTATCTCTAGCTTGGTTTCCACATGAGGTTTTTCTGAGAAGGGCTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTACCACCCCTATGGACTaGAATATTGAGTTAAAAGCC +
Preference number: 2 (lower is better)
Translates to: STHSHLCVSALLQAQYTLTTPMD*NIELKA
Trigger: GGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGT...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR CAA 90 bp GGATTAGTAGGATTTCTTGCCTGCTTAACTAACATGACAGACTTCTaGTCCCAAGCCCTTCTCAGAAAAACCTCATGTGGAAACCAAGCT +
Preference number: 2 (lower is better)
Translates to: GLVGFLACLTNMTDF*SQALLRKTSCGNQA
Trigger: AGCTTGGTTTCCACATGAGGTTTTTCTGAGAAGGGCTTGGGACAAGAAGTCTGTCATGTTAGTTAAGCAGGCAAGAAATCCTACTAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR TCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTATCCCAGTGCCTGACTaGATGTATAGAAAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: STHSHLCVSALLQAQYTLIPVPD*MYRKKN
Trigger: GTTTTTCTTTCTATACATTCAGTCAGGCACTGGGAT...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
3UTR-3UTR CCA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTAGCTTGCTTTCCTGCTaGCCAATACAATCTGCCAAA +
Preference number: 2 (lower is better)
Translates to: RLETSLASNSTHSHLCVSSLLSC*PIQSAK
Trigger: TTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCT...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR TCA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTATCCCAGTGCCTGACTaGATGTATAGAAAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTIPVPD*MYRKKN
Trigger: GTTTTTCTTTCTATACATTCAGTCAGGCACTGGGAT...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
3UTR-3UTR CCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTATGGATTACAGACTGTaGCCATTACGTTTTAGCTTA +
Preference number: 2 (lower is better)
Translates to: STHSHLCVSALLQAQYTLMDYRL*PLRFSL
Trigger: TAAGCTAAAACGTAATGGCCACAGTCTGTAATCCAT...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CCA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGAATCAAATGGTGAAATaGAGCCTCCTTGATAGTTTA +
Preference number: 2 (lower is better)
Translates to: KAELADAVVSIEKEMDEMNQMVK*SLLDSL
Trigger: TAAACTATCAAGGAGGCTCCATTTCACCATTTGATT...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CCA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTCACAAGTGGGATTCATaGTACTGTTCTAAACTGGAA +
Preference number: 2 (lower is better)
Translates to: RLETSLASNSTHSHLCVSHKWDS*YCSKLE
Trigger: TTCCAGTTTAGAACAGTACCATGAATCCCACTTGTG...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
3UTR-3UTR CCA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGAATCAAATGGTGAAATaGAGCCTCCTTGATAGTTTA +
Preference number: 2 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKNQMVK*SLLDSL
Trigger: TAAACTATCAAGGAGGCTCCATTTCACCATTTGATT...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR GCA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACCTGGCCAATACAATCTaGCAAAGAAAATTAGCAGCC +
Preference number: 2 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDLANTI*QRKLAA
Trigger: GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAG...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR GCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCGTGCCATTTGAAAGGTaGTTCTCAGCTATCTTTAAT +
Preference number: 2 (lower is better)
Translates to: MKIWVATAADMITCGCEIVPFER*FSAIFN
Trigger: ATTAAAGATAGCTGAGAAGCACCTTTCAAATGGCAC...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR GCA 72 bp TCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTaGAGCCTTGCAGCAACTTTTAACCACCCCTATGGA +
Preference number: 3 (lower is better)
Translates to: SSSRLPLPTASA*SLAATFNHPYG
Trigger: TCCATAGGGGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CAA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTGCTGAGGTGGGCGGATaGCCTGAGCTCAGGAGTTCG +
Preference number: 3 (lower is better)
Translates to: STHSHLCVSALLQAQYTLAEVGG*PELRSS
Trigger: CGAACTCCTGAGCTCAGGCAATCCGCCCACCTCAGC...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR CAA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTGAGGGACTGTGCCATTaGAAAGGTGCTTCTCAGCTA +
Preference number: 3 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSEGLCH*KGASQL
Trigger: TAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCTC...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CAA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTGTGAGTCGAGGGTCCTaGCGCGCAGAGAATCGTGCA +
Preference number: 3 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTVSRGS*RAENRA
Trigger: TGCACGATTCTCTGCGCGCAAGGACCCTCGACTCAC...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR GCA 72 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTaGTCTGCTTCAAGCACAGTACACTCTTTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: GKQFHTQPFMCE*SASSTVHSLQG
Trigger: TCCCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CAA 90 bp ATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGAATCGTGCATTGTATCAGAAAACTCTTCAGCCATCATaGGCGTCTTCTTTATTAATC +
Preference number: 3 (lower is better)
Translates to: MGVSRGSLRAENRALYQKTLQPS*ASSLLI
Trigger: GATTAATAAAGAAGACGCCAATGATGGCTGAAGAGT...TTTCTGATACAATGCACGATTCTCTGCGCGCAAGGACCCTCGACTCACCCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
3UTR-3UTR CAA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCGTGAGTCGAGGGTCCTaGCGCGCAGAGAATCGTGCA +
Preference number: 3 (lower is better)
Translates to: MKIWVATAADMITCGCEIVSRGS*RAENRA
Trigger: TGCACGATTCTCTGCGCGCAAGGACCCTCGACTCAC...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR CAA 90 bp CTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGTTAGAAAGGAGGGAGGGACTGTGCCATTaGAAAGGTGCTTCTCAGCTA +
Preference number: 3 (lower is better)
Translates to: LPEPTAFKIITPFLLERREGLCH*KGASQL
Trigger: TAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCTC...CCTCCTTTCTAACAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CAA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTCAGCTATCTTTAATATaGACACAAGTGGGATTCATG +
Preference number: 3 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSQLSLI*TQVGFM
Trigger: CATGAATCCCACTTGTGTCAATATTAAAGATAGCTG...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CAA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGAGGGACTGTGCCATTaGAAAGGTGCTTCTCAGCTA +
Preference number: 3 (lower is better)
Translates to: RLETSLASNSTHSHLCVSEGLCH*KGASQL
Trigger: TAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCTC...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR TCA 72 bp GATAGTTTAGGGCCAACAGGATTGGCAAAGACTCCCTaGACCCACAGCCTTCAAAATCATAACCCCATTTCT +
Preference number: 3 (lower is better)
Translates to: DSLGPTGLAKTP*THSLQNHNPIS
Trigger: AGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATCCTGTTGGCCCTAAACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CAA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCGCTGAGATCATGCCATaGCATTCCAGCCTGGGTTAC +
Preference number: 3 (lower is better)
Translates to: MKIWVATAADMITCGCEIAEIMP*HSSLGY
Trigger: GTAACCCAGGCTGGAATGCAATGGCATGATCTCAGC...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR CAA 90 bp CAACAGGATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCACCTTTCCCTTTATGTTaGTGCCATTTCCTTATCAAA +
Preference number: 3 (lower is better)
Translates to: QQDWQRLPEPTAFKIITPPFPLC*CHFLIK
Trigger: TTTGATAAGGAAATGGCACAAACATAAAGGGAAAGG...TGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATCCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR CAA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACATATCGAAACAATCAGTaGCCTCCTGAAATGCAAAAA +
Preference number: 3 (lower is better)
Translates to: GKQFHTQPFMCECSASSTYRNNQ*PPEMQK
Trigger: TTTTTGCATTTCAGGAGGCAACTGATTGTTTCGATA...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR-3UTR CAA 90 bp ATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAACTCTTCAGCCATCATaGGCGTCTTCTTTATTAATC +
Preference number: 3 (lower is better)
Translates to: MEPRNHQYMMTLKRLRGKTLQPS*ASSLLI
Trigger: GATTAATAAAGAAGACGCCAATGATGGCTGAAGAGT...TTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
3UTR-3UTR CAA 90 bp TTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATACTCTTCAGCCATCATaGGCGTCTTCTTTATTAATC +
Preference number: 3 (lower is better)
Translates to: FPAGQYNLPKKISSLSLYTLQPS*ASSLLI
Trigger: GATTAATAAAGAAGACGCCAATGATGGCTGAAGAGT...ATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
3UTR GCA 72 bp CTTTCAAACAAAACTGGATTAGTAGGATTTCTTGCCTaGTTAACTAACATGACAGACTTCTTGTCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: LSNKTGLVGFLA*LTNMTDFLSQA
Trigger: GGCTTGGGACAAGAAGTCTGTCATGTTAGTTAAGCAGGCAAGAAATCCTACTAATCCAGTTTTGTTTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
3UTR TCA 72 bp TATAATGCCTGTAAACAGATGATCCCAGTGCCTGACTaGATGTATAGAAAGAAAAACCTAAAGGTAAAGGGT +
Preference number: 3 (lower is better)
Translates to: YNACKQMIPVPD*MYRKKNLKVKG
Trigger: ACCCTTTACCTTTAGGTTTTTCTTTCTATACATTCAGTCAGGCACTGGGATCATCTGTTTACAGGCATTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
3UTR GCA 72 bp CATAACCATTCTTTTAGACATCTTGAAGAGGGACTGTaGCATTTGAAAGGTGCTTCTCAGCTATCTTTAATA +
Preference number: 3 (lower is better)
Translates to: HNHSFRHLEEGL*HLKGASQLSLI
Trigger: TATTAAAGATAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCTCTTCAAGATGTCTAAAAGAATGGTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGCCAACAGCACCATGGTaGGGGCGGTGGTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRPTAPW*GRWWGA
Trigger: CGCGCCCCACCACCGCCCTCACCATGGTGCTGTTGG...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp GAGAAGGAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACCCAACAGCACCATGGTaGGGGCGGTGGTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: EKEGFQRWGQTGGKCWADPTAPW*GRWWGA
Trigger: CGCGCCCCACCACCGCCCTCACCATGGTGCTGTTGG...GTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp CAACAGGATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCACCAACAGCACCATGGTaGGGGCGGTGGTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: QQDWQRLPEPTAFKIITPPTAPW*GRWWGA
Trigger: CGCGCCCCACCACCGCCCTCACCATGGTGCTGTTGG...TGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATCCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp CCTCTTCCCACTGCCAGTGCCTGCAGCCTTGCAGCAACTTTTAACCACCCCTATCAGCAGCTCTGGACCTaGTGCCCCCTTGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: PLPTASACSLAATFNHPYQQLWT*CPLDRN
Trigger: GTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTGCTG...ATAGGGGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp AGGGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGATTCAGGGATCATGGTaGGGGCGGTGGTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RGLQWLVNLGKTLQPSLAIQGSW*GRWWGA
Trigger: CGCGCCCCACCACCGCCCTCACCATGATCCCTGAAT...CGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000392859.7
CDS-3UTR GCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGCAGCTCTGGACCTGCTaGCCCCTTGACAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRQLWTC*PLDRNR
Trigger: GCGGTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTG...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR GCA 90 bp ATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGAATCGTGCATTGTATCAGAAAGCTGCCTCCAGATACTaGAGAGCTGCCAAATCCGCC +
Preference number: 4 (lower is better)
Translates to: MGVSRGSLRAENRALYQKAASRY*RAAKSA
Trigger: GGCGGATTTGGCAGCTCTGCAGTATCTGGAGGCAGC...TTTCTGATACAATGCACGATTCTCTGCGCGCAAGGACCCTCGACTCACCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp AGGGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTGGGGCCTGAAGGCCTaGCTGGTGCAGGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: RGLQWLVNLGKTLQPSLAWGLKA*LVQVPL
Trigger: AAGTGGCACCTGCACCAGCCAGGCCTTCAGGCCCCA...CGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCACTGAAACATGGGGGTaGGTCGAGGGTCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVTETWG*VEGPCA
Trigger: CGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGT...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACACAGCTCTGGACCTGCTaGCCCCTTGACAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GKQFHTQPFMCECSASSTQLWTC*PLDRNR
Trigger: GCGGTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTG...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR GCA 90 bp GGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTCAGCTCTGGACCTGCTaGCCCCTTGACAGGAACCGC +
Preference number: 4 (lower is better)
Translates to: GLQWLVNLGKTLQPSLASQLWTC*PLDRNR
Trigger: GCGGTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTG...AGACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCCAGCAGCTCTGGACCTaGTGCCCCCTTGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVQQLWT*CPLDRN
Trigger: GTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTGCTG...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AGGGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGCAGCAGCTCTGGACCTaGTGCCCCCTTGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: RGLQWLVNLGKTLQPSLAQQLWT*CPLDRN
Trigger: GTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTGCTG...CGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGACAAGTTTTAAAGCCTTaGTGGGGCCTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRQVLKP*WGLKAW
Trigger: CCAGGCCTTCAGGCCCCAGCAAGGCTTTAAAACTTG...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGTCTGCCTCTTCCCACTaGCAGTGCCTGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRSASSH*QCLQPC
Trigger: GCAAGGCTGCAGGCACTGGCAGTGGGAAGAGGCAGA...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGACACCAGACGGGAGTaGGATGGTGATAACCACATC +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRDTRRE*DGDNHI
Trigger: GATGTGGTTATCACCATCCCACTCCCGTCTGGTGTC...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp CAACAGGATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCAATCAAGTTATCATGGTaGGGGCGGTGGTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: QQDWQRLPEPTAFKIITPIKLSW*GRWWGA
Trigger: CGCGCCCCACCACCGCCCTCACCATGATAACTTGAT...TGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359415.8
CDS-3UTR GCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCTTTGCCCTGTCTCTCTaGATCTCTTCGGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACFALSL*ISSGLL
Trigger: CAACAGGCCCGAAGAGATGCAGAGAGACAGGGCAAA...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCGCTGCCTCCAGATACTaGAGAGCTGCCAAATCCGCC +
Preference number: 4 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVAASRY*RAAKSA
Trigger: GGCGGATTTGGCAGCTCTGCAGTATCTGGAGGCAGC...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCCTGAGGTGGGCGGATTaGCTGAGCTCAGGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: GELAFLLANTICQRKLAALRWAD*LSSGVR
Trigger: GCGAACTCCTGAGCTCAGGCAATCCGCCCACCTCAG...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACATCTGCCTCTTCCCACTaGCAGTGCCTGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GKQFHTQPFMCECSASSTSASSH*QCLQPC
Trigger: GCAAGGCTGCAGGCACTGGCAGTGGGAAGAGGCAGA...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTGCACAGTACACTCTTTaGAGGGACGGCCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSAQYTL*RDGQMF
Trigger: GAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGC...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTTGTGCAGACCGCTGCTaGCAACAGCACCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLQWLVNLGKTLQPSLASCADRC*QQHLRL
Trigger: CAGCCTCAGGTGCTGTTGGCAGCAGCGGTCTGCACA...AGACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359415.8
CDS-3UTR TCA 90 bp ATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGAATCGTGCATTGTATCAGAAACCCCTACGTCACTGTTaGCTGGAAATGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MGVSRGSLRAENRALYQKPLRHC*LEMTSL
Trigger: CAGAGAAGTCATTTCCAGTCAACAGTGACGTAGGGG...TTTCTGATACAATGCACGATTCTCTGCGCGCAAGGACCCTCGACTCACCCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGATGGAAAATGTTGGGCTaGCTGGAAGGAAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRWKMLG*LEGNGV
Trigger: TACCCCATTTCCTTCCAGTCAGCCCAACATTTTCCA...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGCAGCAGCTCTGGACCTaGTGCCCCCTTGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKQQLWT*CPLDRN
Trigger: GTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTGCTG...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGTGTGCAGACCGCTGCTaGCAACAGCACCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: KAELADAVVSIEKEMDEMCADRC*QQHHGE
Trigger: CTCACCATGGTGCTGTTGGCAGCAGCGGTCTGCACA...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp CACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGTGTGCAGACCGCTGCTaGCAACAGCACCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: HSHLCVSALLQAQYTLCRCADRC*QQHHGE
Trigger: CTCACCATGGTGCTGTTGGCAGCAGCGGTCTGCACA...CCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGGAGAGCTTGCTTTCCTaGTGGCCAATACAATCTGCC +
Preference number: 4 (lower is better)
Translates to: ECSASSTVHSLQGRPDVQESLLS*WPIQSA
Trigger: GGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTC...CTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGCTGAGGTGGGCGGATTaGCTGAGCTCAGGAGTTCGC +
Preference number: 4 (lower is better)
Translates to: DWQRLPEPTAFKIITPFLLRWAD*LSSGVR
Trigger: GCGAACTCCTGAGCTCAGGCAATCCGCCCACCTCAG...CAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGATTATCCACATTTGGATaGGTCTGTAGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRLSTFG*VCSCTP
Trigger: AGGGGTGCAGCTACAGACCCATCCAAATGTGGATAA...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTCAGCAGCTCTGGACCTaGTGCCCCCTTGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: RACFPAGQYNLPKKISSLQQLWT*CPLDRN
Trigger: GTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTGCTG...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTTGTGCAGACCGCTGCTaGCAACAGCACCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: WNIELKAKAELADAVVSICADRC*QQHHGE
Trigger: CTCACCATGGTGCTGTTGGCAGCAGCGGTCTGCACA...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCCTCCCGGTATCCCAGTaGGACAATTTCATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACLPVSQ*DNFIKS
Trigger: GCTTTTGATGAAATTGTCGCACTGGGATACCGGGAG...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR GCA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTCATGGCAGCTGTGCTaGCTCCAGATACTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GELAFLLANTICQRKLAASWQLC*LQILQS
Trigger: GCTCTGCAGTATCTGGAGGCAGCACAGCTGCCATGA...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp ATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGAATCGTGCATTGTATCAGAAAGGATGGGTCTGTAGCTaGACCCCTTTCTTATCTTCA +
Preference number: 4 (lower is better)
Translates to: MGVSRGSLRAENRALYQKGWVCS*TPFLSS
Trigger: TGAAGATAAGAAAGGGGTGCAGCTACAGACCCATCC...TTTCTGATACAATGCACGATTCTCTGCGCGCAAGGACCCTCGACTCACCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTTCTTCCCACTGCCAGTaGCTGCAGCCTTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LTTPMDWNIELKAKAELASSHCQ*LQPCSN
Trigger: GTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGA...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTTTTGTGCAGACCGCTaGTGCCAACAGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: ASNSTHSHLCVSALLQAQFCADR*CQQHLR
Trigger: CCTCAGGTGCTGTTGGCAGCAGCGGTCTGCACAAAA...CTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359415.8
CDS-3UTR CCA 90 bp TTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTGGGGCCTGAAGGCCTaGCTGGTGCAGGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: FLLANTICQRKLAAFPFMWGLKA*LVQVPL
Trigger: AAGTGGCACCTGCACCAGCCAGGCCTTCAGGCCCCA...CATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAAGCTTGCTTTCCTGCTaGCCAATACAATCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRSLLSC*PIQSAK
Trigger: TTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCT...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCGCCAGATGTTCAGAGTaGGAGTGGTACTTTTCAACC +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACARCSE*EWYFST
Trigger: GGTTGAAAAGTACCACTCCCACTCTGAACATCTGGC...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp CCTCTTCCCACTGCCAGTGCCTGCAGCCTTGCAGCAACTTTTAACCACCCCTATTCTTCATTTTCCACATaGAGACGAATTCGGCCATAC +
Preference number: 4 (lower is better)
Translates to: PLPTASACSLAATFNHPYSSFST*RRIRPY
Trigger: GTATGGCCGAATTCGTCTTCATGTGGAAAATGAAGA...ATAGGGGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGAGACAAAGGAAACTTaGACAGGGAAGAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRETKET*TGKKSL
Trigger: CAATGACTTCTTCCCTGTTCAAGTTTCCTTTGTCTC...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTCTCTGTGGAAAACCTaGCGGGGCTGTTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVSLWKT*RGCFHL
Trigger: TAGATGGAAACAGCCCCGTCAGGTTTTCCACAGAGA...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGTGGAAGGACAGGCCCTaGAAGGAAAACAACTTGGCA +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRWKDRP*KENNLA
Trigger: TGCCAAGTTGTTTTCCTTTCAGGGCCTGTCCTTCCA...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GATGAGATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGCTTGACAGGAACCGCTaGCGCTTCGCCTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DEMEPRNHQYMMTLKRLRLDRNR*RFASCQ
Trigger: TTGGCAAGAGGCGAAGCGGCAGCGGTTCCTGTCAAG...CCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCATCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264028.5
CDS-3UTR GCA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCTTGACAGGAACCGCTaGCGCTTCGCCTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ELAFLLANTICQRKLAAFLDRNR*RFASCQ
Trigger: TTGGCAAGAGGCGAAGCGGCAGCGGTTCCTGTCAAG...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000392859.7
CDS-3UTR GCA 90 bp CACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGCCTTTCCTGCTTTTGTaGAGACCGCTGCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: HSHLCVSALLQAQYTLCRPFLLL*RPLLPT
Trigger: TGTTGGCAGCAGCGGTCTGCACAAAAGCAGGAAAGG...CCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGCCTTTCCTGCTTTTGTaGAGACCGCTGCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: ASNSTHSHLCVSALLQAQPFLLL*RPLLPT
Trigger: TGTTGGCAGCAGCGGTCTGCACAAAAGCAGGAAAGG...CTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGCCTTTCCTGCTTTTGTaGAGACCGCTGCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: KAELADAVVSIEKEMDEMPFLLL*RPLLPT
Trigger: TGTTGGCAGCAGCGGTCTGCACAAAAGCAGGAAAGG...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp CACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGTTTGCCCTGTCTCTCTaGATCTCTTCGGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: HSHLCVSALLQAQYTLCRFALSL*ISSGLL
Trigger: CAACAGGCCCGAAGAGATGCAGAGAGACAGGGCAAA...CCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTGCCCTGTCTCTCTaGATCTCTTCGGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GELAFLLANTICQRKLAAFALSL*ISSGLL
Trigger: CAACAGGCCCGAAGAGATGCAGAGAGACAGGGCAAA...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AGGGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGCAGATACTGCAGAGCTaGCAAATCCGCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: RGLQWLVNLGKTLQPSLAQILQS*QIRQIL
Trigger: CAGGATTTGGCGGATTTGGCAGCTCTGCAGTATCTG...CGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGCAGATACTGCAGAGCTaGCAAATCCGCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRQILQS*QIRQIL
Trigger: CAGGATTTGGCGGATTTGGCAGCTCTGCAGTATCTG...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTGCTGCCTCCAGATACTaGAGAGCTGCCAAATCCGCC +
Preference number: 4 (lower is better)
Translates to: ELAFLLANTICQRKLAAFAASRY*RAAKSA
Trigger: GGCGGATTTGGCAGCTCTGCAGTATCTGGAGGCAGC...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCAGCATGCATTTTGGTTaGTTCAGAAGTACGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACSMHFG*FRSTLA
Trigger: GGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCT...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTCTTGAAGAGGGACTGTaGCATTTGAAAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSLEEGL*HLKGAS
Trigger: AGAAGCACCTTTCAAATGGCACAGTCCCTCTTCAAG...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTTCTTCCCACTGCCAGTaGCTGCAGCCTTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTSSHCQ*LQPCSN
Trigger: GTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGA...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGAGTCATCTAGTCGTCTaGCTCTTCCCACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: KAELADAVVSIEKEMDEMSHLVV*LFPLPV
Trigger: CACTGGCAGTGGGAAGAGGCAGACGACTAGATGACT...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp TTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATTGCCGCTTCGCCTCTTaGCAAGATGGCGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FPAGQYNLPKKISSLSLYCRFAS*QDGGPK
Trigger: CTTGGGGCCGCCATCTTGGCAAGAGGCGAAGCGGCA...ATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392859.7
CDS-3UTR CCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCGTGGAGCATGCATTTTaGTTGCTTCAGAAGTACGCT +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACVEHAF*LLQKYA
Trigger: AGCGTACTTCTGAAGCAACCAAAATGCATGCTCCAC...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp GGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTCCCCTACGTCACTGTTaGCTGGAAATGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLQWLVNLGKTLQPSLASPLRHC*LEMTSL
Trigger: CAGAGAAGTCATTTCCAGTCAACAGTGACGTAGGGG...AGACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTGAGACAAAGGAAACTTaGACAGGGAAGAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSETKET*TGKKSL
Trigger: CAATGACTTCTTCCCTGTTCAAGTTTCCTTTGTCTC...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp GGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTTCTCTGTGGAAAACCTaGCGGGGCTGTTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: GLQWLVNLGKTLQPSLASSLWKT*RGCFHL
Trigger: TAGATGGAAACAGCCCCGTCAGGTTTTCCACAGAGA...AGACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTACTGAAACATGGGGGTaGGTCGAGGGTCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCTETWG*VEGPCA
Trigger: CGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGT...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTGGAAGGACAGGCCCTaGAAGGAAAACAACTTGGCA +
Preference number: 4 (lower is better)
Translates to: GELAFLLANTICQRKLAAWKDRP*KENNLA
Trigger: TGCCAAGTTGTTTTCCTTTCAGGGCCTGTCCTTCCA...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTCCTTTCCTGCTTTTGTaGAGACCGCTGCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: LTTPMDWNIELKAKAELAPFLLL*RPLLPT
Trigger: TGTTGGCAGCAGCGGTCTGCACAAAAGCAGGAAAGG...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCATGGCAGCTGTGCTaGCTCCAGATACTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RACFPAGQYNLPKKISSLSWQLC*LQILQS
Trigger: GCTCTGCAGTATCTGGAGGCAGCACAGCTGCCATGA...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTTCATGGCAGCTGTGCTaGCTCCAGATACTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ELAFLLANTICQRKLAAFSWQLC*LQILQS
Trigger: GCTCTGCAGTATCTGGAGGCAGCACAGCTGCCATGA...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp CACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGCCTGGCTGGTGCAGGTaGCACTTTTGGTTTATCAGT +
Preference number: 4 (lower is better)
Translates to: HSHLCVSALLQAQYTLCRPGWCR*HFWFIS
Trigger: ACTGATAAACCAAAAGTGGCACCTGCACCAGCCAGG...CCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGCAAGTTTTAAAGCCTTaGTGGGGCCTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKQVLKP*WGLKAW
Trigger: CCAGGCCTTCAGGCCCCAGCAAGGCTTTAAAACTTG...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGATTAATGGGTGGAGCATaGATTTTGGTTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRLMGGA*ILVASE
Trigger: TTCTGAAGCAACCAAAATGCATGCTCCACCCATTAA...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AGGGAAAGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTTCTTCCCACTGCCAGTaGCTGCAGCCTTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: RERLETSLASNSTHSHLCSSHCQ*LQPCSN
Trigger: GTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGA...ACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCTTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GGAGAAATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTTCTGCCTCTTCCCACTaGCAGTGCCTGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GEMKIWVATAADMITCGCSASSH*QCLQPC
Trigger: GCAAGGCTGCAGGCACTGGCAGTGGGAAGAGGCAGA...ACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCATTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTAGTCATCTAGTCGTCTaGCTCTTCCCACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LTTPMDWNIELKAKAELASHLVV*LFPLPV
Trigger: CACTGGCAGTGGGAAGAGGCAGACGACTAGATGACT...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGTAGGATTTCTTGCCTaGTTAACTAACATGACAGAC +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRVGFLA*LTNMTD
Trigger: GTCTGTCATGTTAGTTAAGCAGGCAAGAAATCCTAC...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGATTCCATATTAATGGGTaGAGCATGCATTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRFHING*SMHFGC
Trigger: GCAACCAAAATGCATGCTCCACCCATTAATATGGAA...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCACCACCCCTATGGACTaGAATATTGAGTTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACTTPMD*NIELKA
Trigger: GGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGT...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGGCCAGATGTTCAGAGTaGGAGTGGTACTTTTCAACC +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRARCSE*EWYFST
Trigger: GGTTGAAAAGTACCACTCCCACTCTGAACATCTGGC...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp GATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGTTAGCTTCACGTTCTTaGGTCTCTCTGACGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DWQRLPEPTAFKIITPFLLASRS*VSLTAL
Trigger: CAGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAA...CAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR TCA 90 bp GCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCTTAGCTTCACGTTCTTaGGTCTCTCTGACGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ACFPAGQYNLPKKISSLSLASRS*VSLTAL
Trigger: CAGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAA...GGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCACTGAAACATGGGGGTaGGTCGAGGGTCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEITETWG*VEGPCA
Trigger: CGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGT...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCAACTTGGCAAAGAGATaGAGGAATGAATTGATACGG +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACNLAKR*RNELIR
Trigger: CCGTATCAATTCATTCCTTCATCTCTTTGCCAAGTT...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTAACTTGGCAAAGAGATaGAGGAATGAATTGATACGG +
Preference number: 4 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSNLAKR*RNELIR
Trigger: CCGTATCAATTCATTCCTTCATCTCTTTGCCAAGTT...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTTGGAAGGACAGGCCCTaGAAGGAAAACAACTTGGCA +
Preference number: 4 (lower is better)
Translates to: WNIELKAKAELADAVVSIWKDRP*KENNLA
Trigger: TGCCAAGTTGTTTTCCTTTCAGGGCCTGTCCTTCCA...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACATTGGCAAAGACTCCCTaGACCCACAGCCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: GKQFHTQPFMCECSASSTLAKTP*THSLQN
Trigger: ATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAA...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGTGGAAAATGTTGGGCTaGCTGGAAGGAAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: KAELADAVVSIEKEMDEMWKMLG*LEGNGV
Trigger: TACCCCATTTCCTTCCAGTCAGCCCAACATTTTCCA...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGCTCCCGGTATCCCAGTaGGACAATTTCATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: ASNSTHSHLCVSALLQAQLPVSQ*DNFIKS
Trigger: GCTTTTGATGAAATTGTCGCACTGGGATACCGGGAG...CTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR GCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTCCTGGCTGGTGCAGGTaGCACTTTTGGTTTATCAGT +
Preference number: 4 (lower is better)
Translates to: STHSHLCVSALLQAQYTLPGWCR*HFWFIS
Trigger: ACTGATAAACCAAAAGTGGCACCTGCACCAGCCAGG...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAAGCATGATCATGCCATaGAACTCCATATTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: NVSVTLKHGGESRVLARRSMIMP*NSIFCN
Trigger: ATTACAGAATATGGAGTTGCATGGCATGATCATGCT...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTGCACAGTACACTCTTTaGAGGGACGGCCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: RACFPAGQYNLPKKISSLAQYTL*RDGQMF
Trigger: GAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGC...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTGCACAGTACACTCTTTaGAGGGACGGCCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTAQYTL*RDGQMF
Trigger: GAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGC...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCGTAGGATTTCTTGCCTaGTTAACTAACATGACAGAC +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACVGFLA*LTNMTD
Trigger: GTCTGTCATGTTAGTTAAGCAGGCAAGAAATCCTAC...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp CCTCTTCCCACTGCCAGTGCCTGCAGCCTTGCAGCAACTTTTAACCACCCCTATTGCAGGTGCCACTTTTaGTTTATCAGTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: PLPTASACSLAATFNHPYCRCHF*FISFND
Trigger: ATCATTGAAACTGATAAACCAAAAGTGGCACCTGCA...ATAGGGGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GGCCAGATGTTCAGAGTGGGAGTGGTACTTTTCAACCAGCTAAAAGTGCAGAAGTTATCCACATTTGGATaGGTCTGTAGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: GQMFRVGVVLFNQLKVQKLSTFG*VCSCTP
Trigger: AGGGGTGCAGCTACAGACCCATCCAAATGTGGATAA...CTTCTGCACTTTTAGCTGGTTGAAAAGTACCACTCCCACTCTGAACATCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGAGCTTGCTTTCCTGCTaGCCAATACAATCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: EGFQRWGQTGGKCWADWKSLLSC*PIQSAK
Trigger: TTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCT...CTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GATGAGATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGACTGGGGGCATTCTCTaGAGAGCTTGCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DEMEPRNHQYMMTLKRLRTGGIL*RACFPA
Trigger: AGCAGGAAAGCAAGCTCTCCAGAGAATGCCCCCAGT...CCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCATCTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GAGAAGGAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACAAATGTTGGGCTGACTaGAAGGAAATGGGGTATACG +
Preference number: 4 (lower is better)
Translates to: EKEGFQRWGQTGGKCWADKCWAD*KEMGYT
Trigger: CGTATACCCCATTTCCTTCCAGTCAGCCCAACATTT...GTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTGTAATCCCAACACTTTaGGCCTGTTGTAATTCCTTT +
Preference number: 4 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSVIPTL*ACCNSF
Trigger: AAAGGAATTACAACAGGCCCAAAGTGTTGGGATTAC...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614498.4
CDS-3UTR TCA 90 bp AGGGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGGCCATACTTGTCATCTaGGATCCTAAGCATGATCAT +
Preference number: 4 (lower is better)
Translates to: RGLQWLVNLGKTLQPSLAAILVI*DPKHDH
Trigger: ATGATCATGCTTAGGATCTCAGATGACAAGTATGGC...CGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGAGACAAAGGAAACTTaGACAGGGAAGAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: EGFQRWGQTGGKCWADWKETKET*TGKKSL
Trigger: CAATGACTTCTTCCCTGTTCAAGTTTCCTTTGTCTC...CTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp ATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAATCTCTGTGGAAAACCTaGCGGGGCTGTTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: MEPRNHQYMMTLKRLRGKSLWKT*RGCFHL
Trigger: TAGATGGAAACAGCCCCGTCAGGTTTTCCACAGAGA...TTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGATGCCTGTAAACAGATaGTCCCAGTGCCTGACTGAA +
Preference number: 4 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKMPVNR*SQCLTE
Trigger: TTCAGTCAGGCACTGGGATCATCTGTTTACAGGCAT...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR TCA 90 bp GCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCAGGGACTGTGCCATTTaGAAGGTGCTTCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: ACFPAGQYNLPKKISSLSRDCAI*KVLLSY
Trigger: ATAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCT...GGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTTTGGCAAAGACTCCCTaGACCCACAGCCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: WNIELKAKAELADAVVSILAKTP*THSLQN
Trigger: ATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAA...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTTTGGCAAAGACTCCCTaGACCCACAGCCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LTTPMDWNIELKAKAELALAKTP*THSLQN
Trigger: ATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAA...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTTGGAAAATGTTGGGCTaGCTGGAAGGAAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: LTTPMDWNIELKAKAELAWKMLG*LEGNGV
Trigger: TACCCCATTTCCTTCCAGTCAGCCCAACATTTTCCA...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCAAGCAGACACCAAAGTaGGTCAATAATCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACKQTPK*VNNPIN
Trigger: GTTTATTGGATTATTGACTCACTTTGGTGTCTGCTT...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000534182.2
CDS-3UTR GCA 90 bp CTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGTTAGAAAGGAGGAACAATAGCCTTTCCTaGTTTTGTGCAGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPEPTAFKIITPFLLERRNNSLS*FCADRC
Trigger: GCAGCGGTCTGCACAAAAGCAGGAAAGGCTATTGTT...CCTCCTTTCTAACAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTCCCGGTATCCCAGTaGGACAATTTCATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: ACFPAGQYNLPKKISSLSLPVSQ*DNFIKS
Trigger: GCTTTTGATGAAATTGTCGCACTGGGATACCGGGAG...GGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCTGGCTGGTGCAGGTaGCACTTTTGGTTTATCAGT +
Preference number: 4 (lower is better)
Translates to: ELAFLLANTICQRKLAAFPGWCR*HFWFIS
Trigger: ACTGATAAACCAAAAGTGGCACCTGCACCAGCCAGG...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCAGCATGCATTTTGGTTaGTTCAGAAGTACGCTTGCC +
Preference number: 4 (lower is better)
Translates to: GELAFLLANTICQRKLAASMHFG*FRSTLA
Trigger: GGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCT...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCAGCATGATCATGCCATaGAACTCCATATTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LKVQKSSSRLPLPTASACSMIMP*NSIFCN
Trigger: ATTACAGAATATGGAGTTGCATGGCATGATCATGCT...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTAAGAAGTCATTGGGCTaGCCAGCAATGCTAAACTCC +
Preference number: 4 (lower is better)
Translates to: WNIELKAKAELADAVVSIKKSLG*PAMLNS
Trigger: GGAGTTTAGCATTGCTGGGCAGCCCAATGACTTCTT...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp AGGGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGCTGGCCAATACAATCTaGCAAAGAAAATTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGLQWLVNLGKTLQPSLALANTI*QRKLAA
Trigger: GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAG...CGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTGAGAGCTTGCTTTCCTaGTGGCCAATACAATCTGCC +
Preference number: 4 (lower is better)
Translates to: RACFPAGQYNLPKKISSLESLLS*WPIQSA
Trigger: GGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTC...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTGAGATCATGCCATTaGATTCCAGCCTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: ACFPAGQYNLPKKISSLSLRSCH*IPAWVT
Trigger: TGTAACCCAGGCTGGAATGCAATGGCATGATCTCAG...GGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp CAACAGGATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCACTTGAAGAGGGACTGTaGCATTTGAAAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QQDWQRLPEPTAFKIITPLEEGL*HLKGAS
Trigger: AGAAGCACCTTTCAAATGGCACAGTCCCTCTTCAAG...TGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATCCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCTCTTCCCACTGCCAGTaGCTGCAGCCTTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEISSHCQ*LQPCSN
Trigger: GTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGA...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACTCTGCCTCTTCCCACTaGCAGTGCCTGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDSASSH*QCLQPC
Trigger: GCAAGGCTGCAGGCACTGGCAGTGGGAAGAGGCAGA...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR GCA 90 bp AACCAGCTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTCCATTTATGTGTGAGTaGTCTGCTTCAAGCACAGTA +
Preference number: 4 (lower is better)
Translates to: NQLKVQKSSSRLPLPTASPFMCE*SASSTV
Trigger: TACTGTGCTTGAAGCAGAGCACTCACACATAAATGG...ACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTGTGGAGCATGCATTTTaGTTGCTTCAGAAGTACGCT +
Preference number: 4 (lower is better)
Translates to: GLQWLVNLGKTLQPSLASVEHAF*LLQKYA
Trigger: AGCGTACTTCTGAAGCAACCAAAATGCATGCTCCAC...AGACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGACACCAGACGGGAGTaGGATGGTGATAACCACATC +
Preference number: 4 (lower is better)
Translates to: RLETSLASNSTHSHLCVSDTRRE*DGDNHI
Trigger: GATGTGGTTATCACCATCCCACTCCCGTCTGGTGTC...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTCTGTTTCCATCTACCTaGGTCACTTTGGTAACCTGT +
Preference number: 4 (lower is better)
Translates to: GLQWLVNLGKTLQPSLASLFPST*VTLVTC
Trigger: ACAGGTTACCAAAGTGACCCAGGTAGATGGAAACAG...AGACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp TTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGACTGGGGGCATTCTCTaGAGAGCTTGCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FLLANTICQRKLAAFPFMTGGIL*RACFPA
Trigger: AGCAGGAAAGCAAGCTCTCCAGAGAATGCCCCCAGT...CATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTGAGGAGGTATTTAACTaGGGGCATTCTCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTEEVFN*GHSLES
Trigger: GCTCTCCAGAGAATGCCCCCAGTTAAATACCTCCTC...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTTGTGAAATCCCTAACTaGACAGACATAACCATTCTT +
Preference number: 4 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSCEIPN*TDITIL
Trigger: AAGAATGGTTATGTCTGTCCAGTTAGGGATTTCACA...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTAAATGTTGGGCTGACTaGAAGGAAATGGGGTATACG +
Preference number: 4 (lower is better)
Translates to: GLQWLVNLGKTLQPSLASKCWAD*KEMGYT
Trigger: CGTATACCCCATTTCCTTCCAGTCAGCCCAACATTT...AGACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp CAACAGGATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCAAAATGTTGGGCTGACTaGAAGGAAATGGGGTATACG +
Preference number: 4 (lower is better)
Translates to: QQDWQRLPEPTAFKIITPKCWAD*KEMGYT
Trigger: CGTATACCCCATTTCCTTCCAGTCAGCCCAACATTT...TGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATCCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGACCACCCCTATGGACTaGAATATTGAGTTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: EGFQRWGQTGGKCWADWKTTPMD*NIELKA
Trigger: GGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGT...CTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp CTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGTTAGAAAGGAGGGCCAGATGTTCAGAGTaGGAGTGGTACTTTTCAACC +
Preference number: 4 (lower is better)
Translates to: LPEPTAFKIITPFLLERRARCSE*EWYFST
Trigger: GGTTGAAAAGTACCACTCCCACTCTGAACATCTGGC...CCTCCTTTCTAACAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTCTTCATTTTCCACATaGAGACGAATTCGGCCATAC +
Preference number: 4 (lower is better)
Translates to: GELAFLLANTICQRKLAASSFST*RRIRPY
Trigger: GTATGGCCGAATTCGTCTTCATGTGGAAAATGAAGA...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp AACCAAGCTAGAGATAAGAATTCTTCCCTGATGCAGTTAGGGGAAAGGGAAAGGATGCCTGTAAACAGATaGTCCCAGTGCCTGACTGAA +
Preference number: 4 (lower is better)
Translates to: NQARDKNSSLMQLGERERMPVNR*SQCLTE
Trigger: TTCAGTCAGGCACTGGGATCATCTGTTTACAGGCAT...CCTTTCCCTTTCCCCTAACTGCATCAGGGAAGAATTCTTATCTCTAGCTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR TCA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTAGGGACTGTGCCATTTaGAAGGTGCTTCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: ELAFLLANTICQRKLAAFRDCAI*KVLLSY
Trigger: ATAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCT...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp AACCAAGCTAGAGATAAGAATTCTTCCCTGATGCAGTTAGGGGAAAGGGAAAGGTTGGCAAAGACTCCCTaGACCCACAGCCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: NQARDKNSSLMQLGERERLAKTP*THSLQN
Trigger: ATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAA...CCTTTCCCTTTCCCCTAACTGCATCAGGGAAGAATTCTTATCTCTAGCTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp ATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAATGGAAAATGTTGGGCTaGCTGGAAGGAAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: MEPRNHQYMMTLKRLRGKWKMLG*LEGNGV
Trigger: TACCCCATTTCCTTCCAGTCAGCCCAACATTTTCCA...TTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTAACAATAGCCTTTCCTaGTTTTGTGCAGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTNNSLS*FCADRC
Trigger: GCAGCGGTCTGCACAAAAGCAGGAAAGGCTATTGTT...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCAGCATGCATTTTGGTTaGTTCAGAAGTACGCTTGCC +
Preference number: 4 (lower is better)
Translates to: ACFPAGQYNLPKKISSLSSMHFG*FRSTLA
Trigger: GGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCT...GGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTAAGAAGTCATTGGGCTaGCCAGCAATGCTAAACTCC +
Preference number: 4 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTKKSLG*PAMLNS
Trigger: GGAGTTTAGCATTGCTGGGCAGCCCAATGACTTCTT...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCCTGGCCAATACAATCTaGCAAAGAAAATTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GELAFLLANTICQRKLAALANTI*QRKLAA
Trigger: GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAG...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GCAGACATGATTACATGTGGATGTGAAATCCCTAACTGGACAGACATAACCATTGCACAGTACACTCTTTaGAGGGACGGCCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: ADMITCGCEIPNWTDITIAQYTL*RDGQMF
Trigger: GAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGC...AATGGTTATGTCTGTCCAGTTAGGGATTTCACATCCACATGTAATCATGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACACCATTTATGTGTGAGTaGTCTGCTTCAAGCACAGTA +
Preference number: 4 (lower is better)
Translates to: GKQFHTQPFMCECSASSTPFMCE*SASSTV
Trigger: TACTGTGCTTGAAGCAGAGCACTCACACATAAATGG...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGTAGGATTTCTTGCCTaGTTAACTAACATGACAGAC +
Preference number: 4 (lower is better)
Translates to: EGFQRWGQTGGKCWADWKVGFLA*LTNMTD
Trigger: GTCTGTCATGTTAGTTAAGCAGGCAAGAAATCCTAC...CTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGGTGGAGCATGCATTTTaGTTGCTTCAGAAGTACGCT +
Preference number: 4 (lower is better)
Translates to: DWQRLPEPTAFKIITPFLVEHAF*LLQKYA
Trigger: AGCGTACTTCTGAAGCAACCAAAATGCATGCTCCAC...CAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGCTGTTTCCATCTACCTaGGTCACTTTGGTAACCTGT +
Preference number: 4 (lower is better)
Translates to: DWQRLPEPTAFKIITPFLLFPST*VTLVTC
Trigger: ACAGGTTACCAAAGTGACCCAGGTAGATGGAAACAG...CAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGAAATGTTGGGCTGACTaGAAGGAAATGGGGTATACG +
Preference number: 4 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKKCWAD*KEMGYT
Trigger: CGTATACCCCATTTCCTTCCAGTCAGCCCAACATTT...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGAGGAAATGGATGAGATaGAACCGAGAAACCACCAGT +
Preference number: 4 (lower is better)
Translates to: DWQRLPEPTAFKIITPFLRKWMR*NRETTS
Trigger: ACTGGTGGTTTCTCGGTTCCATCTCATCCATTTCCT...CAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp CTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGTTAGAAAGGAGGTCTTCATTTTCCACATaGAGACGAATTCGGCCATAC +
Preference number: 4 (lower is better)
Translates to: LPEPTAFKIITPFLLERRSSFST*RRIRPY
Trigger: GTATGGCCGAATTCGTCTTCATGTGGAAAATGAAGA...CCTCCTTTCTAACAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGACTGTTGACTGGAAATaGCTTCTCTGGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKTVDWK*LLWILQ
Trigger: CTGAAGAATCCAGAGAAGTCATTTCCAGTCAACAGT...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTCCCCTACGTCACTGTTaGCTGGAAATGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCPLRHC*LEMTSL
Trigger: CAGAGAAGTCATTTCCAGTCAACAGTGACGTAGGGG...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGCTCATATTCTATGTTaGCATCACAGCCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: WNIELKAKAELADAVVSIAHILC*HHSHFH
Trigger: GTGGAAATGGCTGTGATGTCAACATAGAATATGAGC...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp GCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGAACTTGGCAAAGAGATaGAGGAATGAATTGATACGG +
Preference number: 4 (lower is better)
Translates to: ASNSTHSHLCVSALLQAQNLAKR*RNELIR
Trigger: CCGTATCAATTCATTCCTTCATCTCTTTGCCAAGTT...CTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGAAGCAGACACCAAAGTaGGTCAATAATCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRKQTPK*VNNPIN
Trigger: GTTTATTGGATTATTGACTCACTTTGGTGTCTGCTT...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000534182.2
CDS-3UTR GCA 90 bp TTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGAACAATAGCCTTTCCTaGTTTTGTGCAGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: FLLANTICQRKLAAFPFMNNSLS*FCADRC
Trigger: GCAGCGGTCTGCACAAAAGCAGGAAAGGCTATTGTT...CATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp TTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGCTCCCGGTATCCCAGTaGGACAATTTCATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FLLANTICQRKLAAFPFMLPVSQ*DNFIKS
Trigger: GCTTTTGATGAAATTGTCGCACTGGGATACCGGGAG...CATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTCAGATACTGCAGAGCTaGCAAATCCGCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCQILQS*QIRQIL
Trigger: CAGGATTTGGCGGATTTGGCAGCTCTGCAGTATCTG...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp CACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGTTAATGGGTGGAGCATaGATTTTGGTTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: HSHLCVSALLQAQYTLCRLMGGA*ILVASE
Trigger: TTCTGAAGCAACCAAAATGCATGCTCCACCCATTAA...CCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GAGAAGGAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACAGCATGATCATGCCATaGAACTCCATATTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: EKEGFQRWGQTGGKCWADSMIMP*NSIFCN
Trigger: ATTACAGAATATGGAGTTGCATGGCATGATCATGCT...GTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGGATGGGTCTGTAGCTaGACCCCTTTCTTATCTTCA +
Preference number: 4 (lower is better)
Translates to: RLETSLASNSTHSHLCVSGWVCS*TPFLSS
Trigger: TGAAGATAAGAAAGGGGTGCAGCTACAGACCCATCC...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTGAGAGCTTGCTTTCCTaGTGGCCAATACAATCTGCC +
Preference number: 4 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCESLLS*WPIQSA
Trigger: GGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTC...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTCCATTTATGTGTGAGTaGTCTGCTTCAAGCACAGTA +
Preference number: 4 (lower is better)
Translates to: WNIELKAKAELADAVVSIPFMCE*SASSTV
Trigger: TACTGTGCTTGAAGCAGAGCACTCACACATAAATGG...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GGCCAGATGTTCAGAGTGGGAGTGGTACTTTTCAACCAGCTAAAAGTGCAGAAGTTCCATATTAATGGGTaGAGCATGCATTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GQMFRVGVVLFNQLKVQKFHING*SMHFGC
Trigger: GCAACCAAAATGCATGCTCCACCCATTAATATGGAA...CTTCTGCACTTTTAGCTGGTTGAAAAGTACCACTCCCACTCTGAACATCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTTTATCCACATTTGGATaGGTCTGTAGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: RLETSLASNSTHSHLCVSLSTFG*VCSCTP
Trigger: AGGGGTGCAGCTACAGACCCATCCAAATGTGGATAA...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCGACACCAGACGGGAGTaGGATGGTGATAACCACATC +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEIDTRRE*DGDNHI
Trigger: GATGTGGTTATCACCATCCCACTCCCGTCTGGTGTC...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp AACCAGCTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTTCAGCTCCCTCTTCTTaGTATTACAGAATTTCATAC +
Preference number: 4 (lower is better)
Translates to: NQLKVQKSSSRLPLPTASSAPSS*YYRISY
Trigger: GTATGAAATTCTGTAATACCAAGAAGAGGGAGCTGA...ACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAGCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GGAGAAATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAGGAGGTATTTAACTaGGGGCATTCTCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GEMKIWVATAADMITCGCEEVFN*GHSLES
Trigger: GCTCTCCAGAGAATGCCCCCAGTTAAATACCTCCTC...ACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCATTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGTGTGAAATCCCTAACTaGACAGACATAACCATTCTT +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRCEIPN*TDITIL
Trigger: AAGAATGGTTATGTCTGTCCAGTTAGGGATTTCACA...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTAGGAAATGGATGAGATaGAACCGAGAAACCACCAGT +
Preference number: 4 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTRKWMR*NRETTS
Trigger: ACTGGTGGTTTCTCGGTTCCATCTCATCCATTTCCT...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGACCACCCCTATGGACTaGAATATTGAGTTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKTTPMD*NIELKA
Trigger: GGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGT...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GATTGGCAAAGACTCCCTGAACCCACAGCCTTCAAAATCATAACCCCATTTCTGACCACCCCTATGGACTaGAATATTGAGTTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: DWQRLPEPTAFKIITPFLTTPMD*NIELKA
Trigger: GGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGT...CAGAAATGGGGTTATGATTTTGAAGGCTGTGGGTTCAGGGAGTCTTTGCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCTTAGCTTCACGTTCTTaGGTCTCTCTGACGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEILASRS*VSLTAL
Trigger: CAGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAA...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR TCA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTGCCATACTTGTCATCTaGGATCCTAAGCATGATCAT +
Preference number: 4 (lower is better)
Translates to: RACFPAGQYNLPKKISSLAILVI*DPKHDH
Trigger: ATGATCATGCTTAGGATCTCAGATGACAAGTATGGC...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTACTGTTGACTGGAAATaGCTTCTCTGGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RACFPAGQYNLPKKISSLTVDWK*LLWILQ
Trigger: CTGAAGAATCCAGAGAAGTCATTTCCAGTCAACAGT...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTACTGTTGACTGGAAATaGCTTCTCTGGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ELAFLLANTICQRKLAAFTVDWK*LLWILQ
Trigger: CTGAAGAATCCAGAGAAGTCATTTCCAGTCAACAGT...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GGAGAAATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTAACAATAGCCTTTCCTaGTTTTGTGCAGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: GEMKIWVATAADMITCGCNNSLS*FCADRC
Trigger: GCAGCGGTCTGCACAAAAGCAGGAAAGGCTATTGTT...ACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCATTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTGGATGGGTCTGTAGCTaGACCCCTTTCTTATCTTCA +
Preference number: 4 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCGWVCS*TPFLSS
Trigger: TGAAGATAAGAAAGGGGTGCAGCTACAGACCCATCC...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp TTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATAAGAAGTCATTGGGCTaGCCAGCAATGCTAAACTCC +
Preference number: 4 (lower is better)
Translates to: FPAGQYNLPKKISSLSLYKKSLG*PAMLNS
Trigger: GGAGTTTAGCATTGCTGGGCAGCCCAATGACTTCTT...ATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp GCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGGTGCCATTTGAAAGGTaGTTCTCAGCTATCTTTAAT +
Preference number: 4 (lower is better)
Translates to: ASNSTHSHLCVSALLQAQVPFER*FSAIFN
Trigger: ATTAAAGATAGCTGAGAAGCACCTTTCAAATGGCAC...CTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTGCCATTTGAAAGGTaGTTCTCAGCTATCTTTAAT +
Preference number: 4 (lower is better)
Translates to: GKQFHTQPFMCECSASSTVPFER*FSAIFN
Trigger: ATTAAAGATAGCTGAGAAGCACCTTTCAAATGGCAC...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp TCCCAAGCCCTTCTCAGAAAAACCTCATGTGGAAACCAAGCTAGAGATAAGAATCTTGAAGAGGGACTGTaGCATTTGAAAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SQALLRKTSCGNQARDKNLEEGL*HLKGAS
Trigger: AGAAGCACCTTTCAAATGGCACAGTCCCTCTTCAAG...ATTCTTATCTCTAGCTTGGTTTCCACATGAGGTTTTTCTGAGAAGGGCTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACAGTCATCTAGTCGTCTaGCTCTTCCCACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDSHLVV*LFPLPV
Trigger: CACTGGCAGTGGGAAGAGGCAGACGACTAGATGACT...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR GCA 90 bp AACCAAGCTAGAGATAAGAATTCTTCCCTGATGCAGTTAGGGGAAAGGGAAAGGCACCAAATTACATTCTaGCATCTCTCAGGTACACTG +
Preference number: 4 (lower is better)
Translates to: NQARDKNSSLMQLGERERHQITF*HLSGTL
Trigger: CAGTGTACCTGAGAGATGGCAGAATGTAATTTGGTG...CCTTTCCCTTTCCCCTAACTGCATCAGGGAAGAATTCTTATCTCTAGCTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359415.8
CDS-3UTR CCA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTCTGTTTCCATCTACCTaGGTCACTTTGGTAACCTGT +
Preference number: 4 (lower is better)
Translates to: RLETSLASNSTHSHLCVSLFPST*VTLVTC
Trigger: ACAGGTTACCAAAGTGACCCAGGTAGATGGAAACAG...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTCAGCTCCCTCTTCTTaGTATTACAGAATTTCATAC +
Preference number: 4 (lower is better)
Translates to: GELAFLLANTICQRKLAASAPSS*YYRISY
Trigger: GTATGAAATTCTGTAATACCAAGAAGAGGGAGCTGA...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp TCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTCACAAGTGGGATTCATaGTACTGTTCTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: STHSHLCVSALLQAQYTLHKWDS*YCSKLE
Trigger: TTCCAGTTTAGAACAGTACCATGAATCCCACTTGTG...AAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACATGTGAAATCCCTAACTaGACAGACATAACCATTCTT +
Preference number: 4 (lower is better)
Translates to: GKQFHTQPFMCECSASSTCEIPN*TDITIL
Trigger: AAGAATGGTTATGTCTGTCCAGTTAGGGATTTCACA...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGATGGATTACAGACTGTaGCCATTACGTTTTAGCTTA +
Preference number: 4 (lower is better)
Translates to: KAELADAVVSIEKEMDEMMDYRL*PLRFSL
Trigger: TAAGCTAAAACGTAATGGCCACAGTCTGTAATCCAT...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGAATCAAATGGTGAAATaGAGCCTCCTTGATAGTTTA +
Preference number: 4 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRNQMVK*SLLDSL
Trigger: TAAACTATCAAGGAGGCTCCATTTCACCATTTGATT...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp AACCAGCTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTAATCAAATGGTGAAATaGAGCCTCCTTGATAGTTTA +
Preference number: 4 (lower is better)
Translates to: NQLKVQKSSSRLPLPTASNQMVK*SLLDSL
Trigger: TAAACTATCAAGGAGGCTCCATTTCACCATTTGATT...ACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp TCCCAAGCCCTTCTCAGAAAAACCTCATGTGGAAACCAAGCTAGAGATAAGAATAGGAAATGGATGAGATaGAACCGAGAAACCACCAGT +
Preference number: 4 (lower is better)
Translates to: SQALLRKTSCGNQARDKNRKWMR*NRETTS
Trigger: ACTGGTGGTTTCTCGGTTCCATCTCATCCATTTCCT...ATTCTTATCTCTAGCTTGGTTTCCACATGAGGTTTTTCTGAGAAGGGCTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp AGGGAAAGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTTTTCCAGTGTTCATaGGCTTTGGAAAAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: RERLETSLASNSTHSHLCVFQCS*ALEKLL
Trigger: TAGCAGCTTTTCCAAAGCTCATGAACACTGGAAAAC...ACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp TTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGGCTCATATTCTATGTTaGCATCACAGCCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: FLLANTICQRKLAAFPFMAHILC*HHSHFH
Trigger: GTGGAAATGGCTGTGATGTCAACATAGAATATGAGC...CATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GATGAGATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGATCCCAGTGCCTGACTaGATGTATAGAAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: DEMEPRNHQYMMTLKRLRIPVPD*MYRKKN
Trigger: GTTTTTCTTTCTATACATTCAGTCAGGCACTGGGAT...CCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCATCTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR TCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCAGGGACTGTGCCATTTaGAAGGTGCTTCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEIRDCAI*KVLLSY
Trigger: ATAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCT...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTTAATGGGTGGAGCATaGATTTTGGTTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RACFPAGQYNLPKKISSLLMGGA*ILVASE
Trigger: TTCTGAAGCAACCAAAATGCATGCTCCACCCATTAA...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR GCA 90 bp TCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTTCTTTATTAATCTGAAAATTAGTCATCTAGTCGTCTaGCTCTTCCCACTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGKNSSAIIGVFFINLKISHLVV*LFPLPV
Trigger: CACTGGCAGTGGGAAGAGGCAGACGACTAGATGACT...AATTTTCAGATTAATAAAGAAGACGCCAATGATGGCTGAAGAGTTTTTCCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp AGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTCCATTTATGTGTGAGTaGTCTGCTTCAAGCACAGTA +
Preference number: 4 (lower is better)
Translates to: RLETSLASNSTHSHLCVSPFMCE*SASSTV
Trigger: TACTGTGCTTGAAGCAGAGCACTCACACATAAATGG...ACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTGTAGGATTTCTTGCCTaGTTAACTAACATGACAGAC +
Preference number: 4 (lower is better)
Translates to: RACFPAGQYNLPKKISSLVGFLA*LTNMTD
Trigger: GTCTGTCATGTTAGTTAAGCAGGCAAGAAATCCTAC...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAAATCAAATGGTGAAATaGAGCCTCCTTGATAGTTTA +
Preference number: 4 (lower is better)
Translates to: GKQFHTQPFMCECSASSTNQMVK*SLLDSL
Trigger: TAAACTATCAAGGAGGCTCCATTTCACCATTTGATT...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GGAGAAATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTAGGAAATGGATGAGATaGAACCGAGAAACCACCAGT +
Preference number: 4 (lower is better)
Translates to: GEMKIWVATAADMITCGCRKWMR*NRETTS
Trigger: ACTGGTGGTTTCTCGGTTCCATCTCATCCATTTCCT...ACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCATTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCGCCAGATGTTCAGAGTaGGAGTGGTACTTTTCAACC +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEIARCSE*EWYFST
Trigger: GGTTGAAAAGTACCACTCCCACTCTGAACATCTGGC...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp GGAGAAATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGTTTTCCAGTGTTCATaGGCTTTGGAAAAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: GEMKIWVATAADMITCGCVFQCS*ALEKLL
Trigger: TAGCAGCTTTTCCAAAGCTCATGAACACTGGAAAAC...ACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCATTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp TCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTTCTTTATTAATCTGAAAATTTTAGCTTCACGTTCTTaGGTCTCTCTGACGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGKNSSAIIGVFFINLKILASRS*VSLTAL
Trigger: CAGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAA...AATTTTCAGATTAATAAAGAAGACGCCAATGATGGCTGAAGAGTTTTTCCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp GGAGAAATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGCCATACTTGTCATCTaGGATCCTAAGCATGATCAT +
Preference number: 4 (lower is better)
Translates to: GEMKIWVATAADMITCGCAILVI*DPKHDH
Trigger: ATGATCATGCTTAGGATCTCAGATGACAAGTATGGC...ACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCATTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR TCA 90 bp TTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGCTCATATTCTATGTTaGCATCACAGCCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: FPAGQYNLPKKISSLSLYAHILC*HHSHFH
Trigger: GTGGAAATGGCTGTGATGTCAACATAGAATATGAGC...ATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACATGCCTGTAAACAGATaGTCCCAGTGCCTGACTGAA +
Preference number: 4 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDMPVNR*SQCLTE
Trigger: TTCAGTCAGGCACTGGGATCATCTGTTTACAGGCAT...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR GCA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACCTGAGATCATGCCATTaGATTCCAGCCTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDLRSCH*IPAWVT
Trigger: TGTAACCCAGGCTGGAATGCAATGGCATGATCTCAG...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR GCA 90 bp GATGAGATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGTGCCATTTGAAAGGTaGTTCTCAGCTATCTTTAAT +
Preference number: 4 (lower is better)
Translates to: DEMEPRNHQYMMTLKRLRVPFER*FSAIFN
Trigger: ATTAAAGATAGCTGAGAAGCACCTTTCAAATGGCAC...CCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCATCTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp ATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGTGCCATTTGAAAGGTaGTTCTCAGCTATCTTTAAT +
Preference number: 4 (lower is better)
Translates to: MEPRNHQYMMTLKRLRGKVPFER*FSAIFN
Trigger: ATTAAAGATAGCTGAGAAGCACCTTTCAAATGGCAC...TTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCCTTGAAGAGGGACTGTaGCATTTGAAAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEILEEGL*HLKGAS
Trigger: AGAAGCACCTTTCAAATGGCACAGTCCCTCTTCAAG...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTTGCAGGTGCCACTTTTaGTTTATCAGTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: ELAFLLANTICQRKLAAFCRCHF*FISFND
Trigger: ATCATTGAAACTGATAAACCAAAAGTGGCACCTGCA...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp AACCAAGCTAGAGATAAGAATTCTTCCCTGATGCAGTTAGGGGAAAGGGAAAGGATGGATTACAGACTGTaGCCATTACGTTTTAGCTTA +
Preference number: 4 (lower is better)
Translates to: NQARDKNSSLMQLGERERMDYRL*PLRFSL
Trigger: TAAGCTAAAACGTAATGGCCACAGTCTGTAATCCAT...CCTTTCCCTTTCCCCTAACTGCATCAGGGAAGAATTCTTATCTCTAGCTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR GCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCCTGGCCAATACAATCTaGCAAAGAAAATTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEILANTI*QRKLAA
Trigger: GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAG...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp TTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATTTCCATATTAATGGGTaGAGCATGCATTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: FPAGQYNLPKKISSLSLYFHING*SMHFGC
Trigger: GCAACCAAAATGCATGCTCCACCCATTAATATGGAA...ATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp GCAGACATGATTACATGTGGATGTGAAATCCCTAACTGGACAGACATAACCATTCACAAGTGGGATTCATaGTACTGTTCTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: ADMITCGCEIPNWTDITIHKWDS*YCSKLE
Trigger: TTCCAGTTTAGAACAGTACCATGAATCCCACTTGTG...AATGGTTATGTCTGTCCAGTTAGGGATTTCACATCCACATGTAATCATGTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR TCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCATCCCAGTGCCTGACTaGATGTATAGAAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEIIPVPD*MYRKKN
Trigger: GTTTTTCTTTCTATACATTCAGTCAGGCACTGGGAT...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR TCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCAACTTGGCAAAGAGATaGAGGAATGAATTGATACGG +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEINLAKR*RNELIR
Trigger: CCGTATCAATTCATTCCTTCATCTCTTTGCCAAGTT...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTTGCAGGTGCCACTTTTaGTTTATCAGTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCCRCHF*FISFND
Trigger: ATCATTGAAACTGATAAACCAAAAGTGGCACCTGCA...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR TCA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACATCCCAGTGCCTGACTaGATGTATAGAAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDIPVPD*MYRKKN
Trigger: GTTTTTCTTTCTATACATTCAGTCAGGCACTGGGAT...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CCA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACCACAAGTGGGATTCATaGTACTGTTCTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDHKWDS*YCSKLE
Trigger: TTCCAGTTTAGAACAGTACCATGAATCCCACTTGTG...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CCA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCATGGATTACAGACTGTaGCCATTACGTTTTAGCTTA +
Preference number: 4 (lower is better)
Translates to: MKIWVATAADMITCGCEIMDYRL*PLRFSL
Trigger: TAAGCTAAAACGTAATGGCCACAGTCTGTAATCCAT...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CCA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTAATCAAATGGTGAAATaGAGCCTCCTTGATAGTTTA +
Preference number: 4 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCNQMVK*SLLDSL
Trigger: TAAACTATCAAGGAGGCTCCATTTCACCATTTGATT...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp TCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTTCTTTATTAATCTGAAAATTCACAAGTGGGATTCATaGTACTGTTCTAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: SGKNSSAIIGVFFINLKIHKWDS*YCSKLE
Trigger: TTCCAGTTTAGAACAGTACCATGAATCCCACTTGTG...AATTTTCAGATTAATAAAGAAGACGCCAATGATGGCTGAAGAGTTTTTCCCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CCA 90 bp TCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTTCTTTATTAATCTGAAAATTTCAGCTCCCTCTTCTTaGTATTACAGAATTTCATAC +
Preference number: 4 (lower is better)
Translates to: SGKNSSAIIGVFFINLKISAPSS*YYRISY
Trigger: GTATGAAATTCTGTAATACCAAGAAGAGGGAGCTGA...AATTTTCAGATTAATAAAGAAGACGCCAATGATGGCTGAAGAGTTTTTCCCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CCA 90 bp TCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTTCTTTATTAATCTGAAAATTATGGATTACAGACTGTaGCCATTACGTTTTAGCTTA +
Preference number: 4 (lower is better)
Translates to: SGKNSSAIIGVFFINLKIMDYRL*PLRFSL
Trigger: TAAGCTAAAACGTAATGGCCACAGTCTGTAATCCAT...AATTTTCAGATTAATAAAGAAGACGCCAATGATGGCTGAAGAGTTTTTCCCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp CTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTGCCTGCGGACCTGCTGCCCCCTaGACAGGAACCGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: LKVQKSSSRLPLPTASACGPAAP*TGTAAA
Trigger: AGCGGCAGCGGTTCCTGTCAAGGGGGCAGCAGGTCC...GCAGGCACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp CACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGGGACCTGCTGCCCCCTaGACAGGAACCGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: HSHLCVSALLQAQYTLCRGPAAP*TGTAAA
Trigger: AGCGGCAGCGGTTCCTGTCAAGGGGGCAGCAGGTCC...CCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCCTGCCGCTTCGCCTCTaGCCAAGATGGCGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVLPLRL*PRWRPQ
Trigger: TTGGGGCCGCCATCTTGGCAAGAGGCGAAGCGGCAG...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392859.7
CDS-3UTR CAA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCGTGAGTCGAGGGTCCTaGCGCGCAGAGAATCGTGCA +
Preference number: 5 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVVSRGS*RAENRA
Trigger: TGCACGATTCTCTGCGCGCAAGGACCCTCGACTCAC...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGCTGAGATCATGCCATaGCATTCCAGCCTGGGTTAC +
Preference number: 5 (lower is better)
Translates to: NVSVTLKHGGESRVLARRAEIMP*HSSLGY
Trigger: GTAACCCAGGCTGGAATGCAATGGCATGATCTCAGC...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp CCTCTTCCCACTGCCAGTGCCTGCAGCCTTGCAGCAACTTTTAACCACCCCTATCTTAGCTTCACGTTCTaGAGTCTCTCTGACGGCTCT +
Preference number: 5 (lower is better)
Translates to: PLPTASACSLAATFNHPYLSFTF*SLSDGS
Trigger: AGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAAG...ATAGGGGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp GCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCGCTGAGGTGGGCGGATaGCCTGAGCTCAGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: ACFPAGQYNLPKKISSLSAEVGG*PELRSS
Trigger: CGAACTCCTGAGCTCAGGCAATCCGCCCACCTCAGC...GGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp CCTCTTCCCACTGCCAGTGCCTGCAGCCTTGCAGCAACTTTTAACCACCCCTATGAGGGACTGTGCCATTaGAAAGGTGCTTCTCAGCTA +
Preference number: 5 (lower is better)
Translates to: PLPTASACSLAATFNHPYEGLCH*KGASQL
Trigger: TAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCTC...ATAGGGGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGGCAGTGGGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS GCA 90 bp AGTTCGGGTCATTTCCACAAACTGTCGAGAAACAATAGCCTTTCCTaGTTTTGTGCAGACCGCTGCTGCCAACAGCACCATGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SSGHFHKLSRNNSLS*FCADRCCQQHHGEG
Trigger: GCCCTCACCATGGTGCTGTTGGCAGCAGCGGTCTGCACAAAAGCAGGAAAGGCTATTGTTTCTCGACAGTTTGTGGAAATGACCCGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp TTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGGACCTGCTGCCCCCTaGACAGGAACCGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: FPAGQYNLPKKISSLSLYGPAAP*TGTAAA
Trigger: AGCGGCAGCGGTTCCTGTCAAGGGGGCAGCAGGTCC...ATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGTGAGTCGAGGGTCCTaGCGCGCAGAGAATCGTGCA +
Preference number: 5 (lower is better)
Translates to: WNIELKAKAELADAVVSIVSRGS*RAENRA
Trigger: TGCACGATTCTCTGCGCGCAAGGACCCTCGACTCAC...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp AATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTGCTGAGGTGGGCGGATaGCCTGAGCTCAGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: NSTHSHLCVSALLQAQYTAEVGG*PELRSS
Trigger: CGAACTCCTGAGCTCAGGCAATCCGCCCACCTCAGC...AGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGCCAGTGCCTGCAGCCTaGCAGCAACTTTTAACCACC +
Preference number: 5 (lower is better)
Translates to: EGFQRWGQTGGKCWADWKPVPAA*QQLLTT
Trigger: GGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGG...CTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp GAGAAGGAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACCCAGTGCCTGCAGCCTaGCAGCAACTTTTAACCACC +
Preference number: 5 (lower is better)
Translates to: EKEGFQRWGQTGGKCWADPVPAA*QQLLTT
Trigger: GGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGG...GTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTCCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS GCA 90 bp AGTTCGGGTCATTTCCACAAACTGTCGAGAAACAATAGCCTTTCCTaGTTTTGTGCAGACCGCTGCTGCCAACAGCACCTGAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: SSGHFHKLSRNNSLS*FCADRCCQQHLRLR
Trigger: TCTCAGCCTCAGGTGCTGTTGGCAGCAGCGGTCTGCACAAAAGCAGGAAAGGCTATTGTTTCTCGACAGTTTGTGGAAATGACCCGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359415.8
CDS-3UTR CAA 90 bp ATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGAATCGTGCATTGTATCAGAAAAATCCTGGTGCTTTTTaGCCCTGTCTCTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: MGVSRGSLRAENRALYQKNPGAF*PCLSAS
Trigger: AGATGCAGAGAGACAGGGCAAAAAAGCACCAGGATT...TTTCTGATACAATGCACGATTCTCTGCGCGCAAGGACCCTCGACTCACCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp ATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGAATCGTGCATTGTATCAGAAACGAATTCGGCCATACTaGTCATCTGAGATCCTAAGC +
Preference number: 5 (lower is better)
Translates to: MGVSRGSLRAENRALYQKRIRPY*SSEILS
Trigger: GCTTAGGATCTCAGATGACAAGTATGGCCGAATTCG...TTTCTGATACAATGCACGATTCTCTGCGCGCAAGGACCCTCGACTCACCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp AATGTCTCTGTGACACTGAAACATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGATCTACCTGGGTCACTTaGGTAACCTGTATGTTACAG +
Preference number: 5 (lower is better)
Translates to: NVSVTLKHGGESRVLARRSTWVT*VTCMLQ
Trigger: CTGTAACATACAGGTTACCAAAGTGACCCAGGTAGA...TCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAGTGTCACAGAGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTAACATGACAGACTTCTaGTCCCAAGCCCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSNMTDF*SQALLR
Trigger: TCTGAGAAGGGCTTGGGACAAGAAGTCTGTCATGTT...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACGGACCTGCTGCCCCCTaGACAGGAACCGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDGPAAP*TGTAAA
Trigger: AGCGGCAGCGGTTCCTGTCAAGGGGGCAGCAGGTCC...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp GAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGCTTAGCTTCACGTTCTaGAGTCTCTCTGACGGCTCT +
Preference number: 5 (lower is better)
Translates to: EGFQRWGQTGGKCWADWKLSFTF*SLSDGS
Trigger: AGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAAG...CTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp AGGGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGCTTAGCTTCACGTTCTaGAGTCTCTCTGACGGCTCT +
Preference number: 5 (lower is better)
Translates to: RGLQWLVNLGKTLQPSLALSFTF*SLSDGS
Trigger: AGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAAG...CGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTCCAGTGCCTGCAGCCTaGCAGCAACTTTTAACCACC +
Preference number: 5 (lower is better)
Translates to: LTTPMDWNIELKAKAELAPVPAA*QQLLTT
Trigger: GGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGG...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp TGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTCCAGTGCCTGCAGCCTaGCAGCAACTTTTAACCACC +
Preference number: 5 (lower is better)
Translates to: WNIELKAKAELADAVVSIPVPAA*QQLLTT
Trigger: GGTGGTTAAAAGTTGCTGCAAGGCTGCAGGCACTGG...AATGGAGACTACAGCGTCAGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp CACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGAGCACAGTACACTCTTaGCAGGGACGGCCAGATGTT +
Preference number: 5 (lower is better)
Translates to: HSHLCVSALLQAQYTLCRSTVHS*QGRPDV
Trigger: AACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCT...CCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp GCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGAGTGGGAGTAGGCTAGAAACTTCTTaGGCAAGCAATTCCACACAC +
Preference number: 5 (lower is better)
Translates to: ASSTVHSLQGRPDVQSGSRLETS*ASNSTH
Trigger: GTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT...ACTCCCACTCTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp AGGGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGATTCAGGGATCACTCTaGAGAAGAGCCTTAGGGTCT +
Preference number: 5 (lower is better)
Translates to: RGLQWLVNLGKTLQPSLAIQGSL*RRALGS
Trigger: AGACCCTAAGGCTCTTCTCAAGAGTGATCCCTGAAT...CGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCGAGCATGCATTTTGGTaGCTTCAGAAGTACGCTTGC +
Preference number: 5 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVEHAFW*LQKYAC
Trigger: GCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTC...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GAGAAGGAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACGAGCATGCATTTTGGTaGCTTCAGAAGTACGCTTGC +
Preference number: 5 (lower is better)
Translates to: EKEGFQRWGQTGGKCWADEHAFW*LQKYAC
Trigger: GCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTC...GTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGGGTGGAGCATGCATTTaGGTTGCTTCAGAAGTACGC +
Preference number: 5 (lower is better)
Translates to: KAELADAVVSIEKEMDEMGGACI*VASEVR
Trigger: GCGTACTTCTGAAGCAACCAAAATGCATGCTCCACC...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GGAGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCGGTGGAGCATGCATTTaGGTTGCTTCAGAAGTACGC +
Preference number: 5 (lower is better)
Translates to: GELAFLLANTICQRKLAAGGACI*VASEVR
Trigger: GCGTACTTCTGAAGCAACCAAAATGCATGCTCCACC...GGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCCGAATTCGGCCATACTaGTCATCTGAGATCCTAAGC +
Preference number: 5 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVRIRPY*SSEILS
Trigger: GCTTAGGATCTCAGATGACAAGTATGGCCGAATTCG...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GGCCAGATGTTCAGAGTGGGAGTGGTACTTTTCAACCAGCTAAAAGTGCAGAAGGAGGGACTGTGCCATTaGAAAGGTGCTTCTCAGCTA +
Preference number: 5 (lower is better)
Translates to: GQMFRVGVVLFNQLKVQKEGLCH*KGASQL
Trigger: TAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCTC...CTTCTGCACTTTTAGCTGGTTGAAAAGTACCACTCCCACTCTGAACATCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTAGCACAGTACACTCTTaGCAGGGACGGCCAGATGTT +
Preference number: 5 (lower is better)
Translates to: LTTPMDWNIELKAKAELASTVHS*QGRPDV
Trigger: AACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCT...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGATTCAGGGATCACTCTaGAGAAGAGCCTTAGGGTCT +
Preference number: 5 (lower is better)
Translates to: KAELADAVVSIEKEMDEMIQGSL*RRALGS
Trigger: AGACCCTAAGGCTCTTCTCAAGAGTGATCCCTGAAT...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp GCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAGATTCAGGGATCACTCTaGAGAAGAGCCTTAGGGTCT +
Preference number: 5 (lower is better)
Translates to: ASNSTHSHLCVSALLQAQIQGSL*RRALGS
Trigger: AGACCCTAAGGCTCTTCTCAAGAGTGATCCCTGAAT...CTGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp GGCAAGCAATTCCACACACAGCCATTTATGTGTGAGTGCTCTGCTTCAAGCACAAATCCTGGTGCTTTTTaGCCCTGTCTCTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: GKQFHTQPFMCECSASSTNPGAF*PCLSAS
Trigger: AGATGCAGAGAGACAGGGCAAAAAAGCACCAGGATT...TGTGCTTGAAGCAGAGCACTCACACATAAATGGCTGTGTGTGGAATTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTGCTTCAGAAGTACGCTaGCCCATACTAGAGGACATG +
Preference number: 5 (lower is better)
Translates to: LTTPMDWNIELKAKAELAASEVR*PILEDM
Trigger: CATGTCCTCTAGTATGGGCAAGCGTACTTCTGAAGC...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCGAGGGACTGTGCCATTaGAAAGGTGCTTCTCAGCTA +
Preference number: 5 (lower is better)
Translates to: ACFPAGQYNLPKKISSLSEGLCH*KGASQL
Trigger: TAGCTGAGAAGCACCTTTCAAATGGCACAGTCCCTC...GGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTAGCACAGTACACTCTTaGCAGGGACGGCCAGATGTT +
Preference number: 5 (lower is better)
Translates to: ELAFLLANTICQRKLAAFSTVHS*QGRPDV
Trigger: AACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCT...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS TCA 90 bp CCTCTGTGGTTTGTAGTCTCCACTTTAGCACCCCTACGTCACTGTTaGCTGGAAATGACTTCTCTGGATTCTTCAGGCCAATTAGAGACT +
Preference number: 5 (lower is better)
Translates to: PLWFVVSTLAPLRHC*LEMTSLDSSGQLET
Trigger: AGTCTCTAATTGGCCTGAAGAATCCAGAGAAGTCATTTCCAGTCAACAGTGACGTAGGGGTGCTAAAGTGGAGACTACAAACCACAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GAGTGCTCTGCTTCAAGCACAGTACACTCTTTGCAGGGACGGCCAGATGTTCAGTTCAACAAACGTATGTaGTTTTCCAGTGTTCATGAG +
Preference number: 5 (lower is better)
Translates to: ECSASSTVHSLQGRPDVQFNKRM*FSSVHE
Trigger: CTCATGAACACTGGAAAACAACATACGTTTGTTGAA...CTGAACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCTTGAAGCAGAGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp GGCCAGATGTTCAGAGTGGGAGTGGTACTTTTCAACCAGCTAAAAGTGCAGAAGCCTGTTGTAATTCCTTaGCTTTACGACGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: GQMFRVGVVLFNQLKVQKPVVIP*LYDASQ
Trigger: CTGAGATGCGTCGTAAAGCAAAGGAATTACAACAGG...CTTCTGCACTTTTAGCTGGTTGAAAAGTACCACTCCCACTCTGAACATCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp GCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCGAATTCGGCCATACTaGTCATCTGAGATCCTAAGC +
Preference number: 5 (lower is better)
Translates to: ACFPAGQYNLPKKISSLSRIRPY*SSEILS
Trigger: GCTTAGGATCTCAGATGACAAGTATGGCCGAATTCG...GGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTCTGCCACTCTTATTTTaGGCATCAATCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LTTPMDWNIELKAKAELALPLLF*ASITGR
Trigger: CCTGCCTGTGATTGATGCCAAAAATAAGAGTGGCAG...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp AAGGCTGAGCTGGCTGACGCTGTAGTCTCCATTGAAAAGGAAATGGATGAGATGTCTACCTGGGTCACTTaGGTAACCTGTATGTTACAG +
Preference number: 5 (lower is better)
Translates to: KAELADAVVSIEKEMDEMSTWVT*VTCMLQ
Trigger: CTGTAACATACAGGTTACCAAAGTGACCCAGGTAGA...CATCTCATCCATTTCCTTTTCAATGGAGACTACAGCGTCAGCCAGCTCAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCTTCTACCTGGGTCACTTaGGTAACCTGTATGTTACAG +
Preference number: 5 (lower is better)
Translates to: GLQWLVNLGKTLQPSLASSTWVT*VTCMLQ
Trigger: CTGTAACATACAGGTTACCAAAGTGACCCAGGTAGA...AGACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp ATGGGGGTGAGTCGAGGGTCCTTGCGCGCAGAGAATCGTGCATTGTATCAGAAACCTTTCCCTTTATGTTaGTGCCATTTCCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: MGVSRGSLRAENRALYQKPFPLC*CHFLIK
Trigger: TTTGATAAGGAAATGGCACAAACATAAAGGGAAAGG...TTTCTGATACAATGCACGATTCTCTGCGCGCAAGGACCCTCGACTCACCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGAACATGACAGACTTCTaGTCCCAAGCCCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKNMTDF*SQALLR
Trigger: TCTGAGAAGGGCTTGGGACAAGAAGTCTGTCATGTT...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS TCA 90 bp GGATGGGTCTGTAGCTGCACCCCTTTCTTATCTTCATTTTCCACATaGAGACGAATTCGGCCATACTTGTCATCTGAGATCCTAAGCATG +
Preference number: 5 (lower is better)
Translates to: GWVCSCTPFLSSFST*RRIRPYLSSEILSM
Trigger: CATGCTTAGGATCTCAGATGACAAGTATGGCCGAATTCGTCTTCATGTGGAAAATGAAGATAAGAAAGGGGTGCAGCTACAGACCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS GCA 90 bp CACCTTCTCCTCATGAGAATCCATTTCTGTGAAGGTTCTGATCTGTaGCAAGTTAACATTCTCCCGGTATCCCAGTGCGACAATTTCATC +
Preference number: 5 (lower is better)
Translates to: HLLLMRIHFCEGSDL*QVNILPVSQCDNFI
Trigger: GATGAAATTGTCGCACTGGGATACCGGGAGAATGTTAACTTGGCACAGATCAGAACCTTCACAGAAATGGATTCTCATGAGGAGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
ENST00000614498.4
CDS-3UTR CAA 90 bp AGGGAAAGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTGCTTCAGAAGTACGCTaGCCCATACTAGAGGACATG +
Preference number: 5 (lower is better)
Translates to: RERLETSLASNSTHSHLCASEVR*PILEDM
Trigger: CATGTCCTCTAGTATGGGCAAGCGTACTTCTGAAGC...ACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCTTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp TTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGGCTTCAGAAGTACGCTaGCCCATACTAGAGGACATG +
Preference number: 5 (lower is better)
Translates to: FLLANTICQRKLAAFPFMASEVR*PILEDM
Trigger: CATGTCCTCTAGTATGGGCAAGCGTACTTCTGAAGC...CATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTCTGCCACTCTTATTTTaGGCATCAATCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RACFPAGQYNLPKKISSLLPLLF*ASITGR
Trigger: CCTGCCTGTGATTGATGCCAAAAATAAGAGTGGCAG...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCTGCCACTCTTATTTTaGGCATCAATCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ELAFLLANTICQRKLAAFLPLLF*ASITGR
Trigger: CCTGCCTGTGATTGATGCCAAAAATAAGAGTGGCAG...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GGGTCTCCAGTGGCTTGTAAATCTGGGAAAAACTCTTCAGCCATCATTGGCGTCACTCTTCAGCCATCATaGGCGTCTTCTTTATTAATC +
Preference number: 5 (lower is better)
Translates to: GSPVACKSGKNSSAIIGVTLQPS*ASSLLI
Trigger: GATTAATAAAGAAGACGCCAATGATGGCTGAAGAGT...GACGCCAATGATGGCTGAAGAGTTTTTCCCAGATTTACAAGCCACTGGAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp AACCAGCTAAAAGTGCAGAAGTCATCTAGTCGTCTGCCTCTTCCCACTGCCAGTACTCTTCAGCCATCATaGGCGTCTTCTTTATTAATC +
Preference number: 5 (lower is better)
Translates to: NQLKVQKSSSRLPLPTASTLQPS*ASSLLI
Trigger: GATTAATAAAGAAGACGCCAATGATGGCTGAAGAGT...ACTGGCAGTGGGAAGAGGCAGACGACTAGATGACTTCTGCACTTTTAGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGAGGCTAGAAACTTCTTaGGCAAGCAATTCCACACAC +
Preference number: 5 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKRLETS*ASNSTH
Trigger: GTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS GCA 90 bp ATTCGGCCATACTTGTCATCTGAGATCCTAAGCATGATCATGCCATaGAACTCCATATTCTGTAATCCTCCGTCTCGTCCACAGGTTAAT +
Preference number: 5 (lower is better)
Translates to: IRPYLSSEILSMIMP*NSIFCNPPSRPQVN
Trigger: ATTAACCTGTGGACGAGACGGAGGATTACAGAATATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAGTATGGCCGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp ATGGAACCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAACCTGTTGTAATTCCTTaGCTTTACGACGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: MEPRNHQYMMTLKRLRGKPVVIP*LYDASQ
Trigger: CTGAGATGCGTCGTAAAGCAAAGGAATTACAACAGG...TTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGGTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp GGAGAAATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGGTGGAGCATGCATTTaGGTTGCTTCAGAAGTACGC +
Preference number: 5 (lower is better)
Translates to: GEMKIWVATAADMITCGCGGACI*VASEVR
Trigger: GCGTACTTCTGAAGCAACCAAAATGCATGCTCCACC...ACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCATTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGCAGCTATCTTTAATATaGACACAAGTGGGATTCATG +
Preference number: 5 (lower is better)
Translates to: EGFQRWGQTGGKCWADWKQLSLI*TQVGFM
Trigger: CATGAATCCCACTTGTGTCAATATTAAAGATAGCTG...CTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp AAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTGGAAGGTATCGAAACAATCAGTaGCCTCCTGAAATGCAAAAA +
Preference number: 5 (lower is better)
Translates to: KDFRDGDRLVENVGLTGRYRNNQ*PPEMQK
Trigger: TTTTTGCATTTCAGGAGGCAACTGATTGTTTCGATA...CCTTCCAGTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp GAGAAGGAAGGATTTCAGAGATGGGGACAGACTGGTGGAAAATGTTGGGCTGACTATCGAAACAATCAGTaGCCTCCTGAAATGCAAAAA +
Preference number: 5 (lower is better)
Translates to: EKEGFQRWGQTGGKCWADYRNNQ*PPEMQK
Trigger: TTTTTGCATTTCAGGAGGCAACTGATTGTTTCGATA...GTCAGCCCAACATTTTCCACCAGTCTGTCCCCATCTCTGAAATCCTTCCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp AACCAAGCTAGAGATAAGAATTCTTCCCTGATGCAGTTAGGGGAAAGGGAAAGGAGGCTAGAAACTTCTTaGGCAAGCAATTCCACACAC +
Preference number: 5 (lower is better)
Translates to: NQARDKNSSLMQLGERERRLETS*ASNSTH
Trigger: GTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT...CCTTTCCCTTTCCCCTAACTGCATCAGGGAAGAATTCTTATCTCTAGCTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp AGGGAAAGGCTAGAAACTTCTTTGGCAAGCAATTCCACACACAGCCATTTATGTAACATGACAGACTTCTaGTCCCAAGCCCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: RERLETSLASNSTHSHLCNMTDF*SQALLR
Trigger: TCTGAGAAGGGCTTGGGACAAGAAGTCTGTCATGTT...ACATAAATGGCTGTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCTTTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCCTTAGCTTCACGTTCTaGAGTCTCTCTGACGGCTCT +
Preference number: 5 (lower is better)
Translates to: MKIWVATAADMITCGCEILSFTF*SLSDGS
Trigger: AGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAAG...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS-3UTR CAA 90 bp TTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGCCTGTTGTAATTCCTTaGCTTTACGACGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: FLLANTICQRKLAAFPFMPVVIP*LYDASQ
Trigger: CTGAGATGCGTCGTAAAGCAAAGGAATTACAACAGG...CATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp TTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATAATCCTGGTGCTTTTTaGCCCTGTCTCTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: FPAGQYNLPKKISSLSLYNPGAF*PCLSAS
Trigger: AGATGCAGAGAGACAGGGCAAAAAAGCACCAGGATT...ATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTGAGCATGCATTTTGGTaGCTTCAGAAGTACGCTTGC +
Preference number: 5 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCEHAFW*LQKYAC
Trigger: GCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTC...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTAGCTCATATTCTATGTaGACATCACAGCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: LTTPMDWNIELKAKAELASSYSM*TSQPFP
Trigger: TGGAAATGGCTGTGATGTCAACATAGAATATGAGCT...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACGCTGAGATCATGCCATaGCATTCCAGCCTGGGTTAC +
Preference number: 5 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDAEIMP*HSSLGY
Trigger: GTAACCCAGGCTGGAATGCAATGGCATGATCTCAGC...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp ATCTTTAATATTGACACAAGTGGGATTCATGGTACTGTTCTAAACTGGAAGGACAGCACAGTACACTCTTaGCAGGGACGGCCAGATGTT +
Preference number: 5 (lower is better)
Translates to: IFNIDTSGIHGTVLNWKDSTVHS*QGRPDV
Trigger: AACATCTGGCCGTCCCTGCAAAGAGTGTACTGTGCT...GTCCTTCCAGTTTAGAACAGTACCATGAATCCCACTTGTGTCAATATTAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS GCA 90 bp CATATGTACACTTTCCATATTAATGGGTGGAGCATGCATTTTGGTTaGTTCAGAAGTACGCTTGCCCATACTAGAGGACATGATGGTTTC +
Preference number: 5 (lower is better)
Translates to: HMYTFHINGWSMHFG*FRSTLAHTRGHDGF
Trigger: GAAACCATCATGTCCTCTAGTATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATATGGAAAGTGTACATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp TTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATCCTGTTGTAATTCCTTaGCTTTACGACGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: FPAGQYNLPKKISSLSLYPVVIP*LYDASQ
Trigger: CTGAGATGCGTCGTAAAGCAAAGGAATTACAACAGG...ATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp GAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTAGCTCATATTCTATGTaGACATCACAGCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: ELAFLLANTICQRKLAAFSSYSM*TSQPFP
Trigger: TGGAAATGGCTGTGATGTCAACATAGAATATGAGCT...AAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp TTAACCACCCCTATGGACTGGAATATTGAGTTAAAAGCCAAGGCTGAGCTGGCTCCTTTCCCTTTATGTTaGTGCCATTTCCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: LTTPMDWNIELKAKAELAPFPLC*CHFLIK
Trigger: TTTGATAAGGAAATGGCACAAACATAAAGGGAAAGG...AGCCAGCTCAGCCTTGGCTTTTAACTCAATATTCCAGTCCATAGGGGTGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp CCGAGAAACCACCAGTACATGATGACACTCAAAAGACTTAGGGGGAAAGAGAAGCAGCTATCTTTAATATaGACACAAGTGGGATTCATG +
Preference number: 5 (lower is better)
Translates to: PRNHQYMMTLKRLRGKEKQLSLI*TQVGFM
Trigger: CATGAATCCCACTTGTGTCAATATTAAAGATAGCTG...CTTCTCTTTCCCCCTAAGTCTTTTGAGTGTCATCATGTACTGGTGGTTTCTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp GGAGAAATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTAGGCTAGAAACTTCTTaGGCAAGCAATTCCACACAC +
Preference number: 5 (lower is better)
Translates to: GEMKIWVATAADMITCGCRLETS*ASNSTH
Trigger: GTGTGTGGAATTGCTTGCCAAAGAAGTTTCTAGCCT...ACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCATTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS TCA 90 bp GGCCCTGAAAGGAAAACAACTTGGCAAAGAGATGAAGGAATGAATTaGTACGGGAAAAGAACAGAAGACATGCGTATACTCTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: GPERKTTWQRDEGMN*YGKRTEDMRILSVS
Trigger: TGAAACAGAGAGTATACGCATGTCTTCTGTTCTTTTCCCGTATCAATTCATTCCTTCATCTCTTTGCCAAGTTGTTTTCCTTTCAGGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534182.2
CDS GCA 90 bp TCTTCAATCTTCATATGTACACTTTCCATATTAATGGGTGGAGCATaGATTTTGGTTGCTTCAGAAGTACGCTTGCCCATACTAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SSIFICTLSILMGGA*ILVASEVRLPILED
Trigger: GTCCTCTAGTATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATATGGAAAGTGTACATATGAAGATTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp AGAGCTTGCTTTCCTGCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTCAGCTATCTTTAATATaGACACAAGTGGGATTCATG +
Preference number: 5 (lower is better)
Translates to: RACFPAGQYNLPKKISSLQLSLI*TQVGFM
Trigger: CATGAATCCCACTTGTGTCAATATTAAAGATAGCTG...AAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGCAGGAAAGCAAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp AACCAAGCTAGAGATAAGAATTCTTCCCTGATGCAGTTAGGGGAAAGGGAAAGGTATCGAAACAATCAGTaGCCTCCTGAAATGCAAAAA +
Preference number: 5 (lower is better)
Translates to: NQARDKNSSLMQLGERERYRNNQ*PPEMQK
Trigger: TTTTTGCATTTCAGGAGGCAACTGATTGTTTCGATA...CCTTTCCCTTTCCCCTAACTGCATCAGGGAAGAATTCTTATCTCTAGCTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS-3UTR CAA 90 bp GCTGGCCAATACAATCTGCCAAAGAAAATTAGCAGCCTTTCCCTTTATGTTTGTACTCTTCAGCCATCATaGGCGTCTTCTTTATTAATC +
Preference number: 5 (lower is better)
Translates to: AGQYNLPKKISSLSLYVCTLQPS*ASSLLI
Trigger: GATTAATAAAGAAGACGCCAATGATGGCTGAAGAGT...ACAAACATAAAGGGAAAGGCTGCTAATTTTCTTTGGCAGATTGTATTGGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS-3UTR CAA 90 bp ATGAAAATTTGGGTAGCAACAGCAGCAGACATGATTACATGTGGATGTGAAATCAGCTCATATTCTATGTaGACATCACAGCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: MKIWVATAADMITCGCEISSYSM*TSQPFP
Trigger: TGGAAATGGCTGTGATGTCAACATAGAATATGAGCT...GATTTCACATCCACATGTAATCATGTCTGCTGCTGTTGCTACCCAAATTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GCAGACATGATTACATGTGGATGTGAAATCCCTAACTGGACAGACATAACCATTCCTTTCCCTTTATGTTaGTGCCATTTCCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: ADMITCGCEIPNWTDITIPFPLC*CHFLIK
Trigger: TTTGATAAGGAAATGGCACAAACATAAAGGGAAAGG...AATGGTTATGTCTGTCCAGTTAGGGATTTCACATCCACATGTAATCATGTCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000359415.8
CDS-3UTR CAA 90 bp GCAGACATGATTACATGTGGATGTGAAATCCCTAACTGGACAGACATAACCATTTATCGAAACAATCAGTaGCCTCCTGAAATGCAAAAA +
Preference number: 5 (lower is better)
Translates to: ADMITCGCEIPNWTDITIYRNNQ*PPEMQK
Trigger: TTTTTGCATTTCAGGAGGCAACTGATTGTTTCGATA...AATGGTTATGTCTGTCCAGTTAGGGATTTCACATCCACATGTAATCATGTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000534182.2
ENST00000614498.4
CDS CAA 90 bp GGTCTGGGGAACGGGAGCACCAGCAGCTCTGGACCTGCTGCCCCCTaGACAGGAACCGCTGCCGCTTCGCCTCTTGCCAAGATGGCGGCC +
Preference number: 6 (lower is better)
Translates to: GLGNGSTSSSGPAAP*TGTAAASPLAKMAA
Trigger: GGCCGCCATCTTGGCAAGAGGCGAAGCGGCAGCGGTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTGCTGGTGCTCCCGTTCCCCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392859.7
CDS GCA 72 bp TCTGGGGAACGGGAGCACCAGCAGCTCTGGACCTGCTaGCCCCTTGACAGGAACCGCTGCCGCTTCGCCTCT +
Preference number: 6 (lower is better)
Translates to: SGEREHQQLWTC*PLDRNRCRFAS
Trigger: AGAGGCGAAGCGGCAGCGGTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTGCTGGTGCTCCCGTTCCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000392859.7
CDS CAA 72 bp AACGGGAGCACCAGCAGCTCTGGACCTGCTGCCCCCTaGACAGGAACCGCTGCCGCTTCGCCTCTTGCCAAG +
Preference number: 6 (lower is better)
Translates to: NGSTSSSGPAAP*TGTAAASPLAK
Trigger: CTTGGCAAGAGGCGAAGCGGCAGCGGTTCCTGTCAAGGGGGCAGCAGGTCCAGAGCTGCTGGTGCTCCCGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264028.5
ENST00000392859.7
CDS GCA 72 bp CTCTGTGATCATGGCAGCTGTGCTGCCTCCAGATACTaGAGAGCTGCCAAATCCGCCAAATCCTGGTGCTTT +
Preference number: 6 (lower is better)
Translates to: LCDHGSCAASRY*RAAKSAKSWCF
Trigger: AAAGCACCAGGATTTGGCGGATTTGGCAGCTCTGCAGTATCTGGAGGCAGCACAGCTGCCATGATCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 90 bp CCAGATACTGCAGAGCTGCCAAATCCGCCAAATCCTGGTGCTTTTTaGCCCTGTCTCTCTGCATCTCTTCGGGCCTGTTGTAATTCCTTT +
Preference number: 6 (lower is better)
Translates to: PDTAELPNPPNPGAF*PCLSASLRACCNSF
Trigger: AAAGGAATTACAACAGGCCCGAAGAGATGCAGAGAGACAGGGCAAAAAAGCACCAGGATTTGGCGGATTTGGCAGCTCTGCAGTATCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS TCA 72 bp ACTTATCCACTAGGAAAGTGGTCTCTGTGGAAAACCTaGCGGGGCTGTTTCCATCTACCTGGGTCACTTTGG +
Preference number: 6 (lower is better)
Translates to: TYPLGKWSLWKT*RGCFHLPGSLW
Trigger: CCAAAGTGACCCAGGTAGATGGAAACAGCCCCGTCAGGTTTTCCACAGAGACCACTTTCCTAGTGGATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS GCA 72 bp CATTTCCACAAACTGTCGAGAAACAATAGCCTTTCCTaGTTTTGTGCAGACCGCTGCTGCCAACAGCACCTG +
Preference number: 6 (lower is better)
Translates to: HFHKLSRNNSLS*FCADRCCQQHL
Trigger: CAGGTGCTGTTGGCAGCAGCGGTCTGCACAAAAGCAGGAAAGGCTATTGTTTCTCGACAGTTTGTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359415.8
CDS GCA 72 bp CATTTCCACAAACTGTCGAGAAACAATAGCCTTTCCTaGTTTTGTGCAGACCGCTGCTGCCAACAGCACCAT +
Preference number: 6 (lower is better)
Translates to: HFHKLSRNNSLS*FCADRCCQQHH
Trigger: ATGGTGCTGTTGGCAGCAGCGGTCTGCACAAAAGCAGGAAAGGCTATTGTTTCTCGACAGTTTGTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000534182.2
ENST00000614498.4
CDS CAA 90 bp TCCTCTGTGGTTTGTAGTCTCCACTTTAGCACCCCTACGTCACTGTaGACTGGAAATGACTTCTCTGGATTCTTCAGGCCAATTAGAGAC +
Preference number: 6 (lower is better)
Translates to: SSVVCSLHFSTPTSL*TGNDFSGFFRPIRD
Trigger: GTCTCTAATTGGCCTGAAGAATCCAGAGAAGTCATTTCCAGTCAACAGTGACGTAGGGGTGCTAAAGTGGAGACTACAAACCACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 72 bp GGTGGAGCATGCATTTTGGTTGCTTCAGAAGTACGCTaGCCCATACTAGAGGACATGATGGTTTCACCTTCA +
Preference number: 6 (lower is better)
Translates to: GGACILVASEVR*PILEDMMVSPS
Trigger: TGAAGGTGAAACCATCATGTCCTCTAGTATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 72 bp GTTTGTAGTCTCCACTTTAGCACCCCTACGTCACTGTaGACTGGAAATGACTTCTCTGGATTCTTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: VCSLHFSTPTSL*TGNDFSGFFRP
Trigger: TGGCCTGAAGAATCCAGAGAAGTCATTTCCAGTCAACAGTGACGTAGGGGTGCTAAAGTGGAGACTACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS TCA 72 bp TTTGTAGTCTCCACTTTAGCACCCCTACGTCACTGTTaGCTGGAAATGACTTCTCTGGATTCTTCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: FVVSTLAPLRHC*LEMTSLDSSGQ
Trigger: TTGGCCTGAAGAATCCAGAGAAGTCATTTCCAGTCAACAGTGACGTAGGGGTGCTAAAGTGGAGACTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS TCA 72 bp TTCCACATGAAGACGAATTCGGCCATACTTGTCATCTaGGATCCTAAGCATGATCATGCCATGCAACTCCAT +
Preference number: 6 (lower is better)
Translates to: FHMKTNSAILVI*DPKHDHAMQLH
Trigger: ATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAGTATGGCCGAATTCGTCTTCATGTGGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS GCA 72 bp TACTTGTCATCTGAGATCCTAAGCATGATCATGCCATaGAACTCCATATTCTGTAATCCTCCGTCTCGTCCA +
Preference number: 6 (lower is better)
Translates to: YLSSEILSMIMP*NSIFCNPPSRP
Trigger: TGGACGAGACGGAGGATTACAGAATATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS TCA 72 bp TGTAGCTGCACCCCTTTCTTATCTTCATTTTCCACATaGAGACGAATTCGGCCATACTTGTCATCTGAGATC +
Preference number: 6 (lower is better)
Translates to: CSCTPFLSSFST*RRIRPYLSSEI
Trigger: GATCTCAGATGACAAGTATGGCCGAATTCGTCTTCATGTGGAAAATGAAGATAAGAAAGGGGTGCAGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS TCA 72 bp GTTCTAAATTATCTTCTTGTAGCTCATATTCTATGTTaGCATCACAGCCATTTCCACTCTCCGAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VLNYLLVAHILC*HHSHFHSPRAS
Trigger: GCTGGCCCTCGGAGAGTGGAAATGGCTGTGATGTCAACATAGAATATGAGCTACAAGAAGATAATTTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS GCA 72 bp ACTTTCCATATTAATGGGTGGAGCATGCATTTTGGTTaGTTCAGAAGTACGCTTGCCCATACTAGAGGACAT +
Preference number: 6 (lower is better)
Translates to: TFHINGWSMHFG*FRSTLAHTRGH
Trigger: ATGTCCTCTAGTATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATATGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 72 bp TGTACACTTTCCATATTAATGGGTGGAGCATGCATTTaGGTTGCTTCAGAAGTACGCTTGCCCATACTAGAG +
Preference number: 6 (lower is better)
Translates to: CTLSILMGGACI*VASEVRLPILE
Trigger: CTCTAGTATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATATGGAAAGTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 72 bp AGTTCTAAATTATCTTCTTGTAGCTCATATTCTATGTaGACATCACAGCCATTTCCACTCTCCGAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SSKLSSCSSYSM*TSQPFPLSEGQ
Trigger: CTGGCCCTCGGAGAGTGGAAATGGCTGTGATGTCAACATAGAATATGAGCTACAAGAAGATAATTTAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 90 bp ATCTTCATATGTACACTTTCCATATTAATGGGTGGAGCATGCATTTaGGTTGCTTCAGAAGTACGCTTGCCCATACTAGAGGACATGATG +
Preference number: 6 (lower is better)
Translates to: IFICTLSILMGGACI*VASEVRLPILEDMM
Trigger: CATCATGTCCTCTAGTATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATATGGAAAGTGTACATATGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 90 bp ATATTAATGGGTGGAGCATGCATTTTGGTTGCTTCAGAAGTACGCTaGCCCATACTAGAGGACATGATGGTTTCACCTTCAGATTTTAAT +
Preference number: 6 (lower is better)
Translates to: ILMGGACILVASEVR*PILEDMMVSPSDFN
Trigger: ATTAAAATCTGAAGGTGAAACCATCATGTCCTCTAGTATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS GCA 72 bp TTCATATGTACACTTTCCATATTAATGGGTGGAGCATaGATTTTGGTTGCTTCAGAAGTACGCTTGCCCATA +
Preference number: 6 (lower is better)
Translates to: FICTLSILMGGA*ILVASEVRLPI
Trigger: TATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATATGGAAAGTGTACATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 90 bp ATCACTCTTGAGAAGAGCCTTAGGGTCTCCAAATCTTCTAAAATGTaGCTGTTTTTGGTAGTGATCAGTACCATATACAGTTTCTCCATA +
Preference number: 6 (lower is better)
Translates to: ITLEKSLRVSKSSKM*LFLVVISTIYSFSI
Trigger: TATGGAGAAACTGTATATGGTACTGATCACTACCAAAAACAGCAACATTTTAGAAGATTTGGAGACCCTAAGGCTCTTCTCAAGAGTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000614498.4
CDS CAA 90 bp TTGCCCATACTAGAGGACATGATGGTTTCACCTTCAGATTTTAATTaGTCCACAAAGTTATCTACTTCCTTTCCTTTGGCTCCAAGTTTT +
Preference number: 6 (lower is better)
Translates to: LPILEDMMVSPSDFN*STKLSTSFPLAPSF
Trigger: AAAACTTGGAGCCAAAGGAAAGGAAGTAGATAACTTTGTGGACAAATTAAAATCTGAAGGTGAAACCATCATGTCCTCTAGTATGGGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 90 bp ACATCATTCAGTTCTAAATTATCTTCTTGTAGCTCATATTCTATGTaGACATCACAGCCATTTCCACTCTCCGAGGGCCAGCAATTAATT +
Preference number: 6 (lower is better)
Translates to: TSFSSKLSSCSSYSM*TSQPFPLSEGQQLI
Trigger: AATTAATTGCTGGCCCTCGGAGAGTGGAAATGGCTGTGATGTCAACATAGAATATGAGCTACAAGAAGATAATTTAGAACTGAATGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CCA 72 bp TTCAATCTTCATATGTACACTTTCCATATTAATGGGTaGAGCATGCATTTTGGTTGCTTCAGAAGTACGCTT +
Preference number: 6 (lower is better)
Translates to: FNLHMYTFHING*SMHFGCFRSTL
Trigger: AAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATATGGAAAGTGTACATATGAAGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7
CDS CAA 72 bp CTAGAGGACATGATGGTTTCACCTTCAGATTTTAATTaGTCCACAAAGTTATCTACTTCCTTTCCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: LEDMMVSPSDFN*STKLSTSFPLA
Trigger: AGCCAAAGGAAAGGAAGTAGATAACTTTGTGGACAAATTAAAATCTGAAGGTGAAACCATCATGTCCTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264028.5
ENST00000359415.8
ENST00000392859.7