RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARC (Homo sapiens)

Ensembl gene IDs: ENSG00000198576

Ensembl transcript IDs: ENST00000356613.4

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACGGGCAGCTGGCGGCCAGCGGGGCGGGCTTAGTGGCAGGCCCTaGTCCTCGCGCTGGCGCTCAGGGCTAAGCTGGGGCTCCTGCCCT +
Preference number: 1 (lower is better)
Translates to: GRAAGGQRGGLSGRP*SSRWRSGLSWGSCP
Trigger: AGGGCAGGAGCCCCAGCTTAGCCCTGAGCGCCAGCGCGAGGACCAGGGCCTGCCACTAAGCCCGCCCCGCTGGCCGCCAGCTGCCCGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 90 bp GCCGGGAGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTaGCTCTGCCCTAGCTTCTGCTCTGGGTGTCCCATGAGCTTGGTG +
Preference number: 1 (lower is better)
Translates to: AGRGRRRRKSRLPQH*LCPSFCSGCPMSLV
Trigger: CACCAAGCTCATGGGACACCCAGAGCAGAAGCTAGGGCAGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 90 bp AGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTaGCCTAGCTTCTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCT +
Preference number: 1 (lower is better)
Translates to: RGRRRRKSRLPQHWL*PSFCSGCPMSLVAA
Trigger: AGCGGCCACCAAGCTCATGGGACACCCAGAGCAGAAGCTAGGGCAGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 90 bp CGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTGCCCTAGCTTCTaGTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCAT +
Preference number: 1 (lower is better)
Translates to: RRKSRLPQHWLCPSF*SGCPMSLVAAGPCH
Trigger: ATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAGAAGCTAGGGCAGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 90 bp AGTGGCCCACCAGCACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATaGCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCC +
Preference number: 1 (lower is better)
Translates to: SGPPAPGFWCRGRAE*LEAPQEPWLLGCPS
Trigger: GGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTGCTGGTGGGCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 90 bp GCCCACCAGCACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATGCCTaGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCA +
Preference number: 1 (lower is better)
Translates to: AHQHQGSGVGAGQNA*KRPRSHGFWDVLPA
Trigger: TGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTGCTGGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 90 bp GAATCACTGGAGCTGAGGGGCCAGGAAGCACCGGGACATCAGGTCTaGTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: ESLELRGQEAPGHQV*SAACATSTLPWEEG
Trigger: CCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCAGACCTGATGTCCCGGTGCTTCCTGGCCCCTCAGCTCCAGTGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR TCA 90 bp AGAGTGGTCTGCAGGGCTGGTCCCCCAGTGGACAAGGCAGAACGATaGACCCTGAGCCAGCACCTGCTTAGGCTGCAGACGCTAGTGGCC +
Preference number: 1 (lower is better)
Translates to: RVVCRAGPPVDKAER*TLSQHLLRLQTLVA
Trigger: GGCCACTAGCGTCTGCAGCCTAAGCAGGTGCTGGCTCAGGGTTCATCGTTCTGCCTTGTCCACTGGGGGACCAGCCCTGCAGACCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 90 bp AGCTTCTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTaGCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGT +
Preference number: 1 (lower is better)
Translates to: SFCSGCPMSLVAAGP*HPDTWFSGCPEGLG
Trigger: ACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 90 bp ACTTCGCCTCCCACGCAGGCAGCCTGCAAGGTGAGGGGTGGGTGGTaGCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGT +
Preference number: 1 (lower is better)
Translates to: TSPPTQAACKVRGGW*PAQQQRLCGNLETC
Trigger: ACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCACCACCCACCCCTCACCTTGCAGGCTGCCTGCGTGGGAGGCGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 90 bp CTGGCAGGGTGTGGGCTGAAGACTTGTCAGAGTGGTCTGCAGGGCTaGTCCCCCAGTGGACAAGGCAGAACGATGAACCCTGAGCCAGCA +
Preference number: 1 (lower is better)
Translates to: LAGCGLKTCQSGLQG*SPSGQGRTMNPEPA
Trigger: TGCTGGCTCAGGGTTCATCGTTCTGCCTTGTCCACTGGGGGACCAGCCCTGCAGACCACTCTGACAAGTCTTCAGCCCACACCCTGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 90 bp GAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTaGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAATGAGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: ELGGRWPLPSGHLVF*MSRGPGCCSRMRKL
Trigger: CAGCTTCCTCATTCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp GGCCAGCGGGGCGGGCTTAGTGGCAGGCCCTGGTCCTCGCGCTGGCGCTCAGGGCCTCAGCATTGGCTCTaGCCTAGCTTCTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: GQRGGLSGRPWSSRWRSGPQHWL*PSFCSG
Trigger: CCCAGAGCAGAAGCTAGGGCAGAGCCAATGCTGAGG...CCCTGAGCGCCAGCGCGAGGACCAGGGCCTGCCACTAAGCCCGCCCCGCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp CTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGCCGAGCTTGGTGGCCGCTaGCCCCTGCCATCCGGACAC +
Preference number: 2 (lower is better)
Translates to: LCCVCDFYSPLGGGGRAAELGGR*PLPSGH
Trigger: GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTC...GGCAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR TCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGACAGACGGAGGGAGGGTaGTGGGTGGAGCCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGQTEGG*WVEPCR
Trigger: CCTGCAGGGCTCCACCCATCACCCTCCCTCCGTCTG...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp GGCCAGCGGGGCGGGCTTAGTGGCAGGCCCTGGTCCTCGCGCTGGCGCTCAGGGTCAGGTCTGCTCTGCTaGGTGTGCGACTTCTACTCT +
Preference number: 2 (lower is better)
Translates to: GQRGGLSGRPWSSRWRSGSGLLC*VCDFYS
Trigger: AGAGTAGAAGTCGCACACGCAGCAGAGCAGACCTGA...CCCTGAGCGCCAGCGCGAGGACCAGGGCCTGCCACTAAGCCCGCCCCGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp TGGCCCACCAGCACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATGCCTGGAAGCCCCACGCAGGCAGCCTaGAAGGTGAGGGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: WPTSTRVLVSGQGRMPGSPTQAA*KVRGGW
Trigger: CCACCCACCCCTCACCTTGCAGGCTGCCTGCGTGGG...GCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTGCTGGTGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGAGCAGGGCCCGACTCCTaGTGCAGTGGCTCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGAGPDS*CSGSGD
Trigger: GTCCCCAGAGCCACTGCAGCAGGAGTCGGGCCCTGC...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGGAGGGGGCACCCAGCTaGACCAGGGCTTCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWEGAPS*TRASPA
Trigger: TGCAGGGGAAGCCCTGGTCCAGCTGGGTGCCCCCTC...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp CTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGCCTGCCGCTGGGTGCGGTaGTCACATCTGGATGACACG +
Preference number: 2 (lower is better)
Translates to: LCCVCDFYSPLGGGGRAACRWVR*SHLDDT
Trigger: CGTGTCATCCAGATGTGAGCACCGCACCCAGCGGCA...GGCAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGGTGGCCGCTGGCCCCTaGCATCCGGACACTTGGTTT +
Preference number: 2 (lower is better)
Translates to: CSAACATSTLPWEEGAALVAAGP*HPDTWF
Trigger: AAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCAC...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGAGATGGCCTGAGAGTGTaGAGGGTGGGGTCCAGGCCG +
Preference number: 2 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGDGLRV*RVGSRP
Trigger: CGGCCTGGACCCCACCCTCCACACTCTCAGGCCATC...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp ATGCCGGGAGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTCTCTTTGCCGCTGGGTaGGGTGCTCACATCTGGATG +
Preference number: 2 (lower is better)
Translates to: MPGEGGGAGSRGSLSIGSLFAAG*GAHIWM
Trigger: CATCCAGATGTGAGCACCGCACCCAGCGGCAAAGAG...AGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR TCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTTCACTCTCCTGGCTCTaGTGGTGCCAGCTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCSLSWL*WCQLLP
Trigger: AGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGA...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGAGGCTCCCTCAGCATTaGCTCTGCCCTAGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: CSAACATSTLPWEEGAALRLPQH*LCPSFC
Trigger: GCAGAAGCTAGGGCAGAGCCAATGCTGAGGGAGCCT...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTACCCTCCGCCTGCCATaGGTGAGTCATGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCTLRLP*VSHELS
Trigger: GCTCAGCTCATGACTCACCCATGGCAGGCGGAGGGT...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCTCTGCCCTAGCTTCTaGTCTGGGTGTCCCATGAGC +
Preference number: 2 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCLCPSF*SGCPMS
Trigger: GCTCATGGGACACCCAGAGCAGAAGCTAGGGCAGAG...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTGCTCCTGCCCTCTGCTaGAGCCGACTCCTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPAPALC*SRLLSV
Trigger: TACAGAGAGGAGTCGGCTGCAGCAGAGGGCAGGAGC...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR TCA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGGTGCTCACATCTGGATaGCACGAGTGTGTGCGAGTC +
Preference number: 2 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWVLTSG*HECVRV
Trigger: GACTCGCACACACTCGTGTCATCCAGATGTGAGCAC...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR TCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTAGCTGGGGTGTTCTGTaGTGGCCTGAGAGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPSWGVL*WPESVE
Trigger: CTCCACACTCTCAGGCCATCACAGAACACCCCAGCT...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTCTGCTCTGCTGCGTGTaGGACTTCTACTCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPLLCCV*DFYSPL
Trigger: CAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCAG...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGTGCGGTGCTCACATCTaGATGACACGAGTGTGTGCG +
Preference number: 2 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWCGAHI*MTRVCA
Trigger: CGCACACACTCGTGTCATCCAGATGTGAGCACCGCA...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCAGGGAGGGCGTCAGCTaGCTCTGCGGATGCCGGGAG +
Preference number: 2 (lower is better)
Translates to: NLETCCHSPGSDGASCCLREGVS*LCGCRE
Trigger: CTCCCGGCATCCGCAGAGCCAGCTGACGCCCTCCCT...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CAA 90 bp CAGCATTGGCTCTGCCCTAGCTTCTGCTCTGGGTGTCCCATGAGCTaGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: QHWLCPSFCSGCPMS*VAAGPCHPDTWFSG
Trigger: TCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAGAAGCTAGGGCAGAGCCAATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTCCAGCTCAAAAGTCCTaGTGGGCAAAGCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPPAQKS*WAKPQA
Trigger: AGCCTGTGGCTTTGCCCACCAGGACTTTTGAGCTGG...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGAGGGCTCTTTGCCGCTaGGTGCGGTGCTCACATCTG +
Preference number: 2 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPERALCR*VRCSHL
Trigger: CAGATGTGAGCACCGCACCCAGCGGCAAAGAGCCCT...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CCA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGTGCCATCCGGACACTTaGTTTTCTGGATGTCCAGAG +
Preference number: 2 (lower is better)
Translates to: CSAACATSTLPWEEGAALCHPDT*FSGCPE
Trigger: CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCA...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CAA 90 bp GTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTaGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAATG +
Preference number: 2 (lower is better)
Translates to: VSHELGGRWPLPSGH*VFWMSRGPGCCSRM
Trigger: CATTCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR TCA 90 bp GGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTGGTGTTGTAGCAGAATaGGGAAGCTGGGGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: GCPMSLVAAGPCHPDTWFGVVAE*GSWGVL
Trigger: CAGAACACCCCAGCTTCCTCATTCTGCTACAACACC...AAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR TCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTACTTTGTGGGAACCTTaGGACCTGTTGTCACTCTCC +
Preference number: 2 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCTLWEP*DLLSLS
Trigger: GGAGAGTGACAACAGGTCTCAAGGTTCCCACAAAGT...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR GCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAGATGACACGAGTGTGTaGGAGTCCGCCCGGAGCTCG +
Preference number: 2 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRDDTSV*ESARSS
Trigger: CGAGCTCCGGGCGGACTCGCACACACTCGTGTCATC...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 72 bp GCTGGCGGCCAGCGGGGCGGGCTTAGTGGCAGGCCCTaGTCCTCGCGCTGGCGCTCAGGGCTAAGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: AGGQRGGLSGRP*SSRWRSGLSWG
Trigger: GCCCCAGCTTAGCCCTGAGCGCCAGCGCGAGGACCAGGGCCTGCCACTAAGCCCGCCCCGCTGGCCGCCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 72 bp GGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTaGCTCTGCCCTAGCTTCTGCTCTGGGTGTCCCATG +
Preference number: 3 (lower is better)
Translates to: GRRRRKSRLPQH*LCPSFCSGCPM
Trigger: CATGGGACACCCAGAGCAGAAGCTAGGGCAGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CAA 90 bp AAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCAGCTGAGCTCAGGGGGTGTCCCATGAGCTaGGTGGCCGCTGGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: KRPRSHGFWDVLPAAELRGCPMS*VAAGPC
Trigger: GCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCC...CCTGAGCTCAGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CAA 90 bp GTGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGCTGCCTCAGCCGGATTaGAGGACTCAGCCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: VSGQGRMPGSAPGAMASGLPQPD*RTQPLW
Trigger: CCAGAGGGGCTGAGTCCTCAAATCCGGCTGAGGCAG...CCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 72 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTaGGAGTCCGCCCGGAGCTCGAGGGGGCACCCAGCT +
Preference number: 3 (lower is better)
Translates to: WVRCSHLDDTSV*ESARSSRGHPA
Trigger: AGCTGGGTGCCCCCTCGAGCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 72 bp GGAAGCACCGGGACATCAGGTCTGCTCTGCTGCGTGTaGGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGC +
Preference number: 3 (lower is better)
Translates to: GSTGTSGLLCCV*DFYSPLGGGGR
Trigger: GCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCAGACCTGATGTCCCGGTGCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 72 bp CCAGCACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATaGCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGA +
Preference number: 3 (lower is better)
Translates to: PAPGFWCRGRAE*LEAPQEPWLLG
Trigger: TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 72 bp CACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATGCCTaGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTC +
Preference number: 3 (lower is better)
Translates to: HQGSGVGAGQNA*KRPRSHGFWDV
Trigger: GACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CAA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTGCTGTGGCCCCAGCCTaGGGGCTCATGAAAGCCTCT +
Preference number: 3 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPAVAPA*GLMKAS
Trigger: AGAGGCTTTCATGAGCCCCAAGGCTGGGGCCACAGC...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 72 bp CGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTaGCCTAGCTTCTGCTCTGGGTGTCCCATGAGCTTG +
Preference number: 3 (lower is better)
Translates to: RRRKSRLPQHWL*PSFCSGCPMSL
Trigger: CAAGCTCATGGGACACCCAGAGCAGAAGCTAGGGCAGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 72 bp GAGGGGCCAGGAAGCACCGGGACATCAGGTCTGCTCTaGTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: EGPGSTGTSGLL*CVCDFYSPLGG
Trigger: TCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCAGACCTGATGTCCCGGTGCTTCCTGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 72 bp GAGCTGAGGGGCCAGGAAGCACCGGGACATCAGGTCTaGTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: ELRGQEAPGHQV*SAACATSTLPW
Trigger: CCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCAGACCTGATGTCCCGGTGCTTCCTGGCCCCTCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 72 bp TTCGCCTCCCACGCAGGCAGCCTGCAAGGTGAGGGGTaGGTGGTGCCCAGCACAGCAGCAAAGACTTTGTGG +
Preference number: 3 (lower is better)
Translates to: FASHAGSLQGEG*VVPSTAAKTLW
Trigger: CCACAAAGTCTTTGCTGCTGTGCTGGGCACCACCCACCCCTCACCTTGCAGGCTGCCTGCGTGGGAGGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 72 bp CCCACGCAGGCAGCCTGCAAGGTGAGGGGTGGGTGGTaGCCAGCACAGCAGCAAAGACTTTGTGGGAACCTT +
Preference number: 3 (lower is better)
Translates to: PTQAACKVRGGW*PAQQQRLCGNL
Trigger: AAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCACCACCCACCCCTCACCTTGCAGGCTGCCTGCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 72 bp GAGGAAGCTGGGGTGTTCTGTGATGGCCTGAGAGTGTaGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAG +
Preference number: 3 (lower is better)
Translates to: EEAGVFCDGLRV*RVGSRPERQTE
Trigger: CTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACACTCTCAGGCCATCACAGAACACCCCAGCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR GCA 72 bp TCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTaGCATCCGGACACTTGGTTTTCTGGATGTCCAGAG +
Preference number: 3 (lower is better)
Translates to: SGCPMSLVAAGP*HPDTWFSGCPE
Trigger: CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 72 bp GGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTaGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAATG +
Preference number: 3 (lower is better)
Translates to: GRWPLPSGHLVF*MSRGPGCCSRM
Trigger: CATTCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 72 bp CTTCTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTaGCCCCTGCCATCCGGACACTTGGTTTTCTGGATG +
Preference number: 3 (lower is better)
Translates to: LLLWVSHELGGR*PLPSGHLVFWM
Trigger: CATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR-3UTR CAA 90 bp AAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCAGCTGAGCTCAGGGACTTTGTGGGAACCTaGAGACCTGTTGTCACTCTC +
Preference number: 3 (lower is better)
Translates to: KRPRSHGFWDVLPAAELRDFVGT*RPVVTL
Trigger: GAGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTC...CCTGAGCTCAGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CCA 72 bp TGTGGGCTGAAGACTTGTCAGAGTGGTCTGCAGGGCTaGTCCCCCAGTGGACAAGGCAGAACGATGAACCCT +
Preference number: 3 (lower is better)
Translates to: CGLKTCQSGLQG*SPSGQGRTMNP
Trigger: AGGGTTCATCGTTCTGCCTTGTCCACTGGGGGACCAGCCCTGCAGACCACTCTGACAAGTCTTCAGCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp ATGCCGGGAGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTCAGGTCCGGCTCGGCTaGTGCGGAGGGAGGACGCCG +
Preference number: 4 (lower is better)
Translates to: MPGEGGGAGSRGSLSIGSQVRLG*CGGRTP
Trigger: CGGCGTCCTCCCTCCGCAGCAGCCGAGCCGGACCTG...AGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGCCGGTCCCGTGCGGAGCTaGGGGGAGCGCCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LCCVCDFYSPLGGGGRAAGPVRS*GERLSV
Trigger: GACAGACAGGCGCTCCCCGCAGCTCCGCACGGGACC...GGCAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGAGCTGGCTCTGCGGATaGCGGGAGAGGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: CSAACATSTLPWEEGAALSWLCG*RERAAA
Trigger: CGCCGCCGCCCTCTCCCGGCATCCGCAGAGCCAGCT...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp CTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGCCAACGGTGTGGCGGGCTaGCTCGCTGCCCACCGGGTA +
Preference number: 4 (lower is better)
Translates to: LCCVCDFYSPLGGGGRAANGVAG*LAAHRV
Trigger: TACCCGGTGGGCAGCGAGTCAGCCCGCCACACCGTT...GGCAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGAACCTCGGCCAGCAGGTaGCGGTGCGTCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGTSASR*RCVRRT
Trigger: CGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGT...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGCCTGCCCACCGGGTACTTaGCGCCCGTGGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LCCVCDFYSPLGGGGRAACPPGT*RPWTPG
Trigger: GCCTGGAGTCCACGGGCGGCAAGTACCCGGTGGGCA...GGCAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GGCCAGCGGGGCGGGCTTAGTGGCAGGCCCTGGTCCTCGCGCTGGCGCTCAGGGCTCTTTGCCGCTGGGTaGGGTGCTCACATCTGGATG +
Preference number: 4 (lower is better)
Translates to: GQRGGLSGRPWSSRWRSGLFAAG*GAHIWM
Trigger: CATCCAGATGTGAGCACCGCACCCAGCGGCAAAGAG...CCCTGAGCGCCAGCGCGAGGACCAGGGCCTGCCACTAAGCCCGCCCCGCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp ATGCCGGGAGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTCCCACGCAGGCAGCCTaGAAGGTGAGGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: MPGEGGGAGSRGSLSIGSPTQAA*KVRGGW
Trigger: CCACCCACCCCTCACCTTGCAGGCTGCCTGCGTGGG...AGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGCCGCCCTCTACTCGGGCTaGGTCCGGTCACTGGCCACG +
Preference number: 4 (lower is better)
Translates to: LCCVCDFYSPLGGGGRAAALYSG*VRSLAT
Trigger: CGTGGCCAGTGACCGGACCCAGCCCGAGTAGAGGGC...GGCAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GTGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGTGTTGGGGGCGGGCGTaGGGGTCTCCGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: VSGQGRMPGSAPGAMASGCWGRA*GSPPHP
Trigger: AGGATGAGGCGGAGACCCTCACGCCCGCCCCCAACA...CCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp CTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACAGGCAGCCTGCAAGGTaGGGGGTGGGTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLWVSHELGGRWPLPSGHRQPAR*GVGGAQ
Trigger: CTGGGCACCACCCACCCCTCACCTTGCAGGCTGCCT...GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTTGCGTCCGCCGCACGTaGTCCAGCATCTCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCCVRRT*SSISAR
Trigger: CCGGGCCGAGATGCTGGAGCACGTGCGGCGGACGCA...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTCCAGCGGCTCGCCCTaGTTCTGCGGCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLWVSHELGGRWPLPSGHSSGSP*FCGRSS
Trigger: GCTGGACCTGCCGCAGAAGCAGGGCGAGCCGCTGGA...GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGGCCGGCTCGGCCGCCTaGTCCAGGTCATCCTGCACC +
Preference number: 4 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWAGSAA*SRSSCT
Trigger: GGTGCAGGATGACCTGGAGCAGGCGGCCGAGCCGGC...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGCTGGGGGCTCCGGGATaGCCTCTACTCGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CSAACATSTLPWEEGAALLGAPG*PLLGLG
Trigger: ACCCAGCCCGAGTAGAGGGCATCCCGGAGCCCCCAG...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTGGTACTTGCCGCCCGTaGACTCCAGGCGGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCGTCRP*TPGGRP
Trigger: GGGCCGACCGCCTGGAGTCCACGGGCGGCAAGTACC...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGGCCCACCAGCACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATGCCTGGAAGCCACGGCTGGTACTGCTaGGCCTCGGCGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WPTSTRVLVSGQGRMPGSHGWYC*ASAGSC
Trigger: GCAGGAGCCCGCCGAGGCCCAGCAGTACCAGCCGTG...GCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTGCTGGTGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTGCGAGTCCGCCCGGAGCCCGGGGACCCACGGCTaGTACTGCTGGGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: WVRCSHLDDTSVCESARSPGTHG*YCWASA
Trigger: CGCCGAGGCCCAGCAGTACCAGCCGTGGGTCCCCGG...GCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp ATGCCGGGAGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTTTGCGCCACAGGAACTaGTCCAGCGGCTCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: MPGEGGGAGSRGSLSIGSLRHRN*SSGSPC
Trigger: GCAGGGCGAGCCGCTGGACCAGTTCCTGTGGCGCAA...AGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGCCCCCTCTGGGCTGTCCTaGGACTTCGCCTCCCACGCA +
Preference number: 4 (lower is better)
Translates to: LCCVCDFYSPLGGGGRAAPSGLS*DFASHA
Trigger: TGCGTGGGAGGCGAAGTCCCAGGACAGCCCAGAGGG...GGCAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp ATGCCGGGAGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTTGCCTCAGCCGGATTTaGGGACTCAGCCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: MPGEGGGAGSRGSLSIGSCLSRI*GLSPSG
Trigger: CCCAGAGGGGCTGAGTCCTCAAATCCGGCTGAGGCA...AGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp AAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCAGCTGAGCTCAGGGCCAGCAGGTGCCGGTaGGTCCGCCGCACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KRPRSHGFWDVLPAAELRASRCR*VRRTCS
Trigger: GGAGCACGTGCGGCGGACGCACCGGCACCTGCTGGC...CCTGAGCTCAGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp ATGCCGGGAGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTCGCTTGAGCTTGGGCTaGAGGGTGCCCACCACGTAC +
Preference number: 4 (lower is better)
Translates to: MPGEGGGAGSRGSLSIGSRLSLG*RVPTTY
Trigger: GTACGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCG...AGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTGGGCCCGACTCCTGCTaGAGTGGCTCTGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPGPDSC*SGSGDG
Trigger: CCCGTCCCCAGAGCCACTGCAGCAGGAGTCGGGCCC...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCGCCGCTGGTCCGGTaGTCCAGCTCCATCTGTGCG +
Preference number: 4 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCPPLVR*SSSICA
Trigger: CGCACAGATGGAGCTGGACCACCGGACCAGCGGCGG...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTGCGAGTCCGCCCGGAGCCGTGGAGCCCGCCGCTaGTCCGGTGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: WVRCSHLDDTSVCESARSRGARR*SGGPAP
Trigger: TGGAGCTGGACCACCGGACCAGCGGCGGGCTCCACG...GCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGGCTGCGAGTCGCTCGTaGGCACGTAGCCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CSAACATSTLPWEEGAALAASRS*ARSRPG
Trigger: ACCTGGACGGCTACGTGCCCACGAGCGACTCGCAGC...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGAGCAGAGAGGATGGCCTaGCAGCGGGCGGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGAERMA*QRAGFP
Trigger: GGGAAACCCCGCCCGCTGCCAGGCCATCCTCTCTGC...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCGTGCATCTCGCGCTTaGCCCAGCGCTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCRASRA*PSAPGW
Trigger: CCAACCTGGAGCGCTGGGTCAAGCGCGAGATGCACG...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp CTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACCCATGCCCCTCTGGATaGGCTGCTCCAGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLWVSHELGGRWPLPSGHPCPSG*AAPGSW
Trigger: CCAAGACCCTGGAGCAGCTCATCCAGAGGGGCATGG...GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACGACTTCTTCCAGCGCTaGGAGTCGCTCGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: LLWVSHELGGRWPLPSGHDFFQR*ESLVGT
Trigger: CGTGCCCACGAGCGACTCGCAGCGCTGGAAGAAGTC...GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GCAAGGGGCAGGGGTTGGCCACAGCCTCATGAGGTTTCCAGGGTCTTCACAGGCACCCACGGCTGGTACTaGTGGGCCTCGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ARGRGWPQPHEVSRVFTGTHGWY*WASAGS
Trigger: GGAGCCCGCCGAGGCCCAGCAGTACCAGCCGTGGGT...GCCTGTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTCGGGGCAGGGCAGAATaGCTGGAAGCGCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPRGRAE*LEAPQE
Trigger: CTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGGTCTTGGGCAGGGGGTaGCGCAGGAAACGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: CSAACATSTLPWEEGAALVLGRG*RRKRLS
Trigger: GCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGAC...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGGCCCACCAGCACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATGCCTGGAAGCACTTCTACTCTCCCCTaGGAGGAGGGGGCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: WPTSTRVLVSGQGRMPGSTSTLP*EEGAAL
Trigger: CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGT...GCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTGCTGGTGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTCCCTGGTCCTCGCGCTaGCGCTCAGGGCTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPPWSSR*RSGLSW
Trigger: CCAGCTTAGCCCTGAGCGCCAGCGCGAGGACCAGGG...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGAGCCTCACTCTCCTGGCTCTaGTGGTGCCAGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: EGGVQAGKTDGGRVMGGASLSWL*WCQLLP
Trigger: AGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGA...GGCTCCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGACCATCTGTGCGCAGGTaGTCCGGCAGGCGGCAAACT +
Preference number: 4 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGPSVRR*SGRRQT
Trigger: AGTTTGCCGCCTGCCGGAGCACCTGCGCACAGATGG...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GCAAGGGGCAGGGGTTGGCCACAGCCTCATGAGGTTTCCAGGGTCTTCACAGGCTTCCCGACCGACCGGTaGAGCCCCTTCAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: ARGRGWPQPHEVSRVFTGFPTDR*SPFSSR
Trigger: GCGCGAGCTGAAGGGGCTGCACCGGTCGGTCGGGAA...GCCTGTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACGGTACAGGTCCCGCTTaGGCCACAGGAACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLWVSHELGGRWPLPSGHGTGPA*ATGTGP
Trigger: TGGACCAGTTCCTGTGGCGCAAGCGGGACCTGTACC...GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTGATGACACGAGTGTGTaGGAGTCCGCCCGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCDDTSV*ESARSS
Trigger: CGAGCTCCGGGCGGACTCGCACACACTCGTGTCATC...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GTGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGTGCCGCTGGGTGCGGTaGTCACATCTGGATGACACG +
Preference number: 4 (lower is better)
Translates to: VSGQGRMPGSAPGAMASGCRWVR*SHLDDT
Trigger: CGTGTCATCCAGATGTGAGCACCGCACCCAGCGGCA...CCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGGTGGCCGCTGGCCCCTaGCATCCGGACACTTGGTTT +
Preference number: 4 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWVAAGP*HPDTWF
Trigger: AAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCAC...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTGGGGCTCCTGCCCTCTaGTGCAGCCGACTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPGAPAL*CSRLLS
Trigger: AGAGAGGAGTCGGCTGCAGCAGAGGGCAGGAGCCCC...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACCTTGTCAGAGTGGTCTaGAGGGCTGGTCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLWVSHELGGRWPLPSGHLVRVV*RAGPPV
Trigger: CACTGGGGGACCAGCCCTGCAGACCACTCTGACAAG...GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGATCACGTTGGGCTTaGCCACCTGCCCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPEGSRWA*PPARPA
Trigger: CGCGGGGCGGGCAGGTGGCCAAGCCCAACGTGATCC...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GCAAGGGGCAGGGGTTGGCCACAGCCTCATGAGGTTTCCAGGGTCTTCACAGGCCCCACGGAAACGGTGTaGCGGGCTGACTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARGRGWPQPHEVSRVFTGPTETV*RADSLP
Trigger: GGGCAGCGAGTCAGCCCGCCACACCGTTTCCGTGGG...GCCTGTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GCAAGGGGCAGGGGTTGGCCACAGCCTCATGAGGTTTCCAGGGTCTTCACAGGCGCTGCTCCAGGGTCTTaGGCAGGGGGTGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: ARGRGWPQPHEVSRVFTGAAPGS*AGGGAG
Trigger: TCCTGCGCCACCCCCTGCCCAAGACCCTGGAGCAGC...GCCTGTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp AAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCAGCTGAGCTCAGGGAGGGGGCACCCAGCTaGACCAGGGCTTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KRPRSHGFWDVLPAAELREGAPS*TRASPA
Trigger: TGCAGGGGAAGCCCTGGTCCAGCTGGGTGCCCCCTC...CCTGAGCTCAGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTCGCTCAGGGCTAAGCTaGGGCTCCTGCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPRSGLS*GSCPLL
Trigger: CAGCAGAGGGCAGGAGCCCCAGCTTAGCCCTGAGCG...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGAGCGCCCCAGGAGCCATaGCTTCTGGGATGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGAPQEP*LLGCPS
Trigger: GGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGC...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGAGCAGGGCAGAATGCCTaGAAGCGCCCCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGAGQNA*KRPRSH
Trigger: ATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGC...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGAGCCTCACGGAGCCCTGCTTaGACTCCCACCACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EGGVQAGKTDGGRVMGGASRSPA*TPTTSW
Trigger: CCAAGAAGTGGTGGGAGTTCAAGCAGGGCTCCGTGA...GGCTCCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGAGCCCCTCAGCATTGGCTCTaGCCTAGCTTCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: EGGVQAGKTDGGRVMGGAPQHWL*PSFCSG
Trigger: CCCAGAGCAGAAGCTAGGGCAGAGCCAATGCTGAGG...GGCTCCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGCAGGGCCCGACTCCTaGTGCAGTGGCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPEAGPDS*CSGSGD
Trigger: GTCCCCAGAGCCACTGCAGCAGGAGTCGGGCCCTGC...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp ATGCCGGGAGAGGGCGGCGGCGCCGGAAGTCGAGGCTCCCTCAGCATTGGCTCTACTCCCACCACTTCTTaGCCGGCCCGTTCATGTGAT +
Preference number: 4 (lower is better)
Translates to: MPGEGGGAGSRGSLSIGSTPTTS*PARSCD
Trigger: ATCACATGAACGGGCCGGCCAAGAAGTGGTGGGAGT...AGAGCCAATGCTGAGGGAGCCTCGACTTCCGGCGCCGCCGCCCTCTCCCGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGAAGGGCTCTTTGCCGCTaGGTGCGGTGCTCACATCTG +
Preference number: 4 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGRALCR*VRCSHL
Trigger: CAGATGTGAGCACCGCACCCAGCGGCAAAGAGCCCT...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGGGGCTGGTCCCCCAGTaGACAAGGCAGAACGATGAA +
Preference number: 4 (lower is better)
Translates to: CSAACATSTLPWEEGAALGLVPQ*TRQNDE
Trigger: TTCATCGTTCTGCCTTGTCCACTGGGGGACCAGCCC...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTAGTGGTCTGCAGGGCTaGTCCCCCAGTGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPSGLQG*SPSGQG
Trigger: GCCTTGTCCACTGGGGGACCAGCCCTGCAGACCACT...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGAGCCCCGACATTTAAGGCCTaGTCTGTGTGGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: EGGVQAGKTDGGRVMGGAPTFKA*SVWGKG
Trigger: CCCCTTGCCCCACACAGACCAGGCCTTAAATGTCGG...GGCTCCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGAGCTCGCGCTCCACCTaGTTGGACACCTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPESSRST*LDTSAS
Trigger: GCTGGCCGAGGTGTCCAAGCAGGTGGAGCGCGAGCT...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGGCCCACCAGCACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATGCCTGGAAGCGTAGTCGTAGCCGTCTaGCTCGTGGCAGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: WPTSTRVLVSGQGRMPGSVVVAV*LVAVAL
Trigger: GAGAGCTACTGCCACGAGGCAGACGGCTACGACTAC...GCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTGCTGGTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTGCTCCAGGTCATCCTaGACCTCCATGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GCPMSLVAAGPCHPDTWFCSRSS*TSMPLW
Trigger: CCAGAGGGGCATGGAGGTGCAGGATGACCTGGAGCA...AAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGCTCTGCCCTAGCTTCTaGTCTGGGTGTCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWLCPSF*SGCPMS
Trigger: GCTCATGGGACACCCAGAGCAGAAGCTAGGGCAGAG...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGACTGCTCTGCTGCGTGTaGGACTTCTACTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGLLCCV*DFYSPL
Trigger: CAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCAG...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTGCGAGTCCGCCCGGAGCGTCTCTGGGGTAAGGTaGACAGGGCCTGGACCGACA +
Preference number: 4 (lower is better)
Translates to: WVRCSHLDDTSVCESARSVSGVR*TGPGPT
Trigger: TGTCGGTCCAGGCCCTGTGCACCTTACCCCAGAGAC...GCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCCAGCTCGCCAGCGGCTaGGGGCGGGGTGATGGCGTA +
Preference number: 4 (lower is better)
Translates to: NLETCCHSPGSDGASCCLQLASG*GRGDGV
Trigger: TACGCCATCACCCCGCCCCCAGCCGCTGGCGAGCTG...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGAGCCCCAGCTCAAAAGTCCTaGTGGGCAAAGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: EGGVQAGKTDGGRVMGGAPAQKS*WAKPQA
Trigger: AGCCTGTGGCTTTGCCCACCAGGACTTTTGAGCTGG...GGCTCCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTGCGGTGCTCACATCTaGATGACACGAGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LLWVSHELGGRWPLPSGHCGAHI*MTRVCA
Trigger: CGCACACACTCGTGTCATCCAGATGTGAGCACCGCA...GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGCTTAGTGGCAGGCCCTaGTCCTCGCGCTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPELSGRP*SSRWRS
Trigger: TGAGCGCCAGCGCGAGGACCAGGGCCTGCCACTAAG...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTGGGGCTGGCAGGGTGTaGGCTGAAGACTTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GCPMSLVAAGPCHPDTWFGAGRV*AEDLSE
Trigger: CTCTGACAAGTCTTCAGCCCACACCCTGCCAGCCCC...AAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GTGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGGGTGTTGTAGCAGAATaGGGAAGCTGGGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VSGQGRMPGSAPGAMASGGVVAE*GSWGVL
Trigger: CAGAACACCCCAGCTTCCTCATTCTGCTACAACACC...CCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGTTCTCCAGGCGGGCGTaGATCACTGGAGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPEFSRRA*ITGAEG
Trigger: CCCCTCAGCTCCAGTGATTCACGCCCGCCTGGAGAA...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGTTGGCCACAGCCTCATaGGGTTTCCAGGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWLATAS*GFQGLH
Trigger: GTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAA...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAGGCGGGCTGACTCGCTaGCCACCGGGTACTTGCCGC +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRGGLTR*PPGTCR
Trigger: GCGGCAAGTACCCGGTGGGCAGCGAGTCAGCCCGCC...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGCCCCTCTGGATGAGCTaGTCCAGGGTCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPEPLWMS*SRVLGR
Trigger: CCTGCCCAAGACCCTGGAGCAGCTCATCCAGAGGGG...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GGGAACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCGCGCTCCACCTGCTTaGACACCTCGGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GNLETCCHSPGSDGASCCRAPPA*TPRPAG
Trigger: ACCTGCTGGCCGAGGTGTCCAAGCAGGTGGAGCGCG...GCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp AAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCAGCTGAGCTCAGGAAGGTGAGGGGTGGGTaGTGCCCAGCACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KRPRSHGFWDVLPAAELRKVRGG*CPAQQQ
Trigger: TTGCTGCTGTGCTGGGCACCACCCACCCCTCACCTT...CCTGAGCTCAGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGAAGGAGCCATGGCTTCTaGGATGTCCTTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CRGRAECLEAPQEPWLLGRSHGF*DVLPAA
Trigger: AGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCT...TCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CAA 72 bp GAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTaGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ELGGRWPLPSGH*VFWMSRGPGCC
Trigger: ACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GCAAGGGGCAGGGGTTGGCCACAGCCTCATGAGGTTTCCAGGGTCTTCACAGGCAGCTGGGGTGTTCTGTaGTGGCCTGAGAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: ARGRGWPQPHEVSRVFTGSWGVL*WPESVE
Trigger: CTCCACACTCTCAGGCCATCACAGAACACCCCAGCT...GCCTGTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GTGTCGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGACTTTGTGGGAACCTTaGGACCTGTTGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: VSGQGRMPGSAPGAMASGTLWEP*DLLSLS
Trigger: GGAGAGTGACAACAGGTCTCAAGGTTCCCACAAAGT...CCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp AAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCAGCTGAGCTCAGGTGGCAGGGTGTGGGCTaGAGACTTGTCAGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: KRPRSHGFWDVLPAAELRWQGVG*RLVRVV
Trigger: GACCACTCTGACAAGTCTTCAGCCCACACCCTGCCA...CCTGAGCTCAGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGAGCCAGCCTGTGCCAGCCTTaGGGATTGGTTATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: EGGVQAGKTDGGRVMGGASLCQP*GLVMAY
Trigger: ATAAGCCATAACCAATCCTCAAGGCTGGCACAGGCT...GGCTCCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCGTCCAGCTCCATCTGTaGGCAGGTGCTCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NLETCCHSPGSDGASCCLVQLHL*AGAPAG
Trigger: GCCTGCCGGAGCACCTGCGCACAGATGGAGCTGGAC...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp GCAAGGGGCAGGGGTTGGCCACAGCCTCATGAGGTTTCCAGGGTCTTCACAGGCCGGCACTTCCCGATCTaGAGGATCACGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ARGRGWPQPHEVSRVFTGRHFPI*RITLGL
Trigger: CAAGCCCAACGTGATCCTGCAGATCGGGAAGTGCCG...GCCTGTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCGGGTCCTCGAAGATCTaGGTGTCCACGCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NLETCCHSPGSDGASCCLGSSKI*VSTPGL
Trigger: CAGCCCCGGCGTGGACACGCAGATCTTCGAGGACCC...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGACATCAGGTCTGCTCTaGTGCGTGTGCGACTTCTAC +
Preference number: 4 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWTSGLL*CVCDFY
Trigger: GTAGAAGTCGCACACGCAGCAGAGCAGACCTGATGT...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCTTGGCGATGGTCTCCTaGCAGCGGCACAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: NLETCCHSPGSDGASCCLLAMVS*QRHRQA
Trigger: GGCCTGCCTGTGCCGCTGCCAGGAGACCATCGCCAA...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTAAGTACTCCTCTAGGTaGCTCAGGAACTCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCKYSSR*LRNSRG
Trigger: CCCTCGAGAGTTCCTGAGCCACCTAGAGGAGTACTT...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGACCAGCTCGCGCTGGATaGCCTCTCGGGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRPARAG*PLGTAC
Trigger: GCACGCTGTCCCGAGAGGCCATCCAGCGCGAGCTGG...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp AAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCAGCTGAGCTCAGGGTGCCCACCACGTACTaGATGATCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: KRPRSHGFWDVLPAAELRVPTTY*MISSSS
Trigger: GGACGAGGAGGAGATCATCCAGTACGTGGTGGGCAC...CCTGAGCTCAGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CTGCTCTGGGTGTCCCATGAGCTTGGTGGCCGCTGGCCCCTGCCATCCGGACACTGCCATCCGGACACTTaGTTTTCTGGATGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLWVSHELGGRWPLPSGHCHPDT*FSGCPE
Trigger: CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCA...GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCCAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GGGAACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCAGCCTTGGGGCTCATaGAAGCCTCTGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GNLETCCHSPGSDGASCCQPWGS*KPLAER
Trigger: CCTCTCTGCCAGAGGCTTTCATGAGCCCCAAGGCTG...GCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCCGTAGCCGTCCAGGTTaGTCTCCAGCTTCCCGACCG +
Preference number: 4 (lower is better)
Translates to: NLETCCHSPGSDGASCCLRSRPG*SPASRP
Trigger: CGGTCGGGAAGCTGGAGAGCAACCTGGACGGCTACG...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CATGAGGTTTCCAGGGTCTTCACAGGCTCCAGGGCTTCCCCAAAGCCTGTGCCACCGGGACATCAGGTCTaGTCTGCTGCGTGTGCGACT +
Preference number: 4 (lower is better)
Translates to: HEVSRVFTGSRASPKPVPPGHQV*SAACAT
Trigger: AGTCGCACACGCAGCAGAGCAGACCTGATGTCCCGG...TGGCACAGGCTTTGGGGAAGCCCTGGAGCCTGTGAAGACCCTGGAAACCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGACCCAGCGCTCCAGGTTaGCGATGGTCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRPSAPG*RWSPGS
Trigger: GCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGG...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGAAGACTTGTCAGAGTaGTCTGCAGGGCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPEEDLSE*SAGLVP
Trigger: GGGGACCAGCCCTGCAGACCACTCTGACAAGTCTTC...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCGGCACAGGCAGGCCTTaGTGGACTTCTTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: NLETCCHSPGSDGASCCLGTGRP*WTSSSA
Trigger: AGCGCTGGAAGAAGTCCATCAAGGCCTGCCTGTGCC...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTGCGAGTCCGCCCGGAGCGCAGGAACTCCTTCTTaGACTCCACCCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: WVRCSHLDDTSVCESARSAGTPS*TPPSSS
Trigger: TGAAGAACTGGGTGGAGTTCAAGAAGGAGTTCCTGC...GCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTCAGACGGAGGGAGGGTaGTGGGTGGAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSQTEGG*WVEPCR
Trigger: CCTGCAGGGCTCCACCCATCACCCTCCCTCCGTCTG...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp GGGAACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCAGAACGATGAACCCTaGGCCAGCACCTGCTTAGGC +
Preference number: 4 (lower is better)
Translates to: GNLETCCHSPGSDGASCCQNDEP*ASTCLG
Trigger: GCCTAAGCAGGTGCTGGCTCAGGGTTCATCGTTCTG...GCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp AAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTTCCTGCAGCTGAGCTCAGGGTGCCCTCGCTGTACTaGAGGAACTCCTTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: KRPRSHGFWDVLPAAELRVPSLY*RNSFLN
Trigger: GTTCAAGAAGGAGTTCCTGCAGTACAGCGAGGGCAC...CCTGAGCTCAGCTGCAGGAAGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGACCTCTCGGGACAGCGTaGCCTCGCTGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRPLGTA*PRCTAG
Trigger: TCCTGCAGTACAGCGAGGGCACGCTGTCCCGAGAGG...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCGTGAGGGGTGGGTGGTaGCCAGCACAGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NLETCCHSPGSDGASCCLVRGGW*PAQQQR
Trigger: TCTTTGCTGCTGTGCTGGGCACCACCCACCCCTCAC...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGATCTGCAGGATCACGTTaGGCTTGGCCACCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRSAGSR*AWPPAR
Trigger: GCGGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGA...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTGAGCTTGGTGGCCGCTaGCCCCTGCCATCCGGACAC +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSELGGR*PLPSGH
Trigger: GTGTCCGGATGGCAGGGGCCAGCGGCCACCAAGCTC...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTAGGGAGGGCGTCAGCTaGCTCTGCGGATGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSREGVS*LCGCRE
Trigger: CTCCCGGCATCCGCAGAGCCAGCTGACGCCCTCCCT...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp GCAAGGGGCAGGGGTTGGCCACAGCCTCATGAGGTTTCCAGGGTCTTCACAGGCAAAAGAGTCTGTCTCTaGGGTAAGGTGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARGRGWPQPHEVSRVFTGKRVCL*GKVHRA
Trigger: GGCCCTGTGCACCTTACCCCAGAGACAGACTCTTTT...GCCTGTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAGCCGGCCCGTTCATGTaGTTCTGGATCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRAGPFM*FWIWDS
Trigger: GCTGTCCCAGATCCAGAATCACATGAACGGGCCGGC...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGATCAGAGCCGCCCACCTaGCGCAAGTACTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRSEPPT*RKYSSR
Trigger: CCTAGAGGAGTACTTGCGGCAGGTGGGCGGCTCTGA...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTGATGGCCTGAGAGTGTaGAGGGTGGGGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSDGLRV*RVGSRP
Trigger: CGGCCTGGACCCCACCCTCCACACTCTCAGGCCATC...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAACCCTCCGCCTGCCATaGGTGAGTCATGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRTLRLP*VSHELS
Trigger: GCTCAGCTCATGACTCACCCATGGCAGGCGGAGGGT...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAGACAAGGCAGAACGATaGACCCTGAGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRDKAER*TLSQHL
Trigger: CAGGTGCTGGCTCAGGGTTCATCGTTCTGCCTTGTC...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTACCTCGCGCCACACGTaGATCTCGCGCTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSTSRHT*ISRLTQ
Trigger: CTGGGTCAAGCGCGAGATGCACGTGTGGCGCGAGGT...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTGCTCCAGGTTGGCGATaGTCTCCTGGCAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSAPGWR*SPGSGT
Trigger: TGTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGC...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CCA 90 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTGCGAGTCCGCCCGGAGCGCCAGCCTTGAGGATTaGTTATGGCTTATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: WVRCSHLDDTSVCESARSASLED*LWLMCK
Trigger: TTTGCACATAAGCCATAACCAATCCTCAAGGCTGGC...GCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR TCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTCCACCACGTACTGGATaGTCTCCTCCTCGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSPPRTG*SPPRPR
Trigger: ACGCGGACGAGGAGGAGATCATCCAGTACGTGGTGG...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTGCTCCTGCCCTCTGCTaGAGCCGACTCCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSAPALC*SRLLSV
Trigger: TACAGAGAGGAGTCGGCTGCAGCAGAGGGCAGGAGC...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGATTCTTCACGGAGCCCTaGTTGAACTCCCACCACTTC +
Preference number: 4 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRFFTEP*LNSHHF
Trigger: GAAGTGGTGGGAGTTCAAGCAGGGCTCCGTGAAGAA...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR GCA 90 bp TGCCCAGCACAGCAGCAAAGACTTTGTGGGAACCTTGAGACCTGTTGTCACTCTTCAGGTCTGCTCTGCTaGGTGTGCGACTTCTACTCT +
Preference number: 4 (lower is better)
Translates to: CPAQQQRLCGNLETCCHSSGLLC*VCDFYS
Trigger: AGAGTAGAAGTCGCACACGCAGCAGAGCAGACCTGA...AGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTCTTTGCTGCTGTGCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
3UTR CAA 72 bp ACAGGCTCCAGGGCTTCCCCAAAGCCTGTGCCAGCCTaGAGGATTGGTTATGGCTTATGTGCAAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: TGSRASPKPVPA*RIGYGLCAKIK
Trigger: TTTTATTTTTGCACATAAGCCATAACCAATCCTCAAGGCTGGCACAGGCTTTGGGGAAGCCCTGGAGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp CCGGGGCTGGGCTGCCCGTCCTCGCCGGGGACCCACGGCTGGTACTaGTGGGCCTCGGCGGGCTCCTGCCCGGGCAGCTCGCCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: PGLGCPSSPGTHGWY*WASAGSCPGSSPAA
Trigger: AGCCGCTGGCGAGCTGCCCGGGCAGGAGCCCGCCGAGGCCCAGCAGTACCAGCCGTGGGTCCCCGGCGAGGACGGGCAGCCCAGCCCCGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp GGGCTGGGCTGCCCGTCCTCGCCGGGGACCCACGGCTGGTACTGCTaGGCCTCGGCGGGCTCCTGCCCGGGCAGCTCGCCAGCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GLGCPSSPGTHGWYC*ASAGSCPGSSPAAG
Trigger: CCCAGCCGCTGGCGAGCTGCCCGGGCAGGAGCCCGCCGAGGCCCAGCAGTACCAGCCGTGGGTCCCCGGCGAGGACGGGCAGCCCAGCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp GCATCTCGGCCCGGCACTTCCCGATCTGCAGGATCACGTTGGGCTTaGCCACCTGCCCGCCCCGCGGCCCGGGGTAGGCGTGGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: ASRPGTSRSAGSRWA*PPARPAARGRRGAR
Trigger: GCGGGCTCCACGCCTACCCCGGGCCGCGGGGCGGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGATCGGGAAGTGCCGGGCCGAGATGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp GTCCGCCGCACGTGCTCCAGCATCTCGGCCCGGCACTTCCCGATCTaGAGGATCACGTTGGGCTTGGCCACCTGCCCGCCCCGCGGCCCG +
Preference number: 5 (lower is better)
Translates to: VRRTCSSISARHFPI*RITLGLATCPPRGP
Trigger: CGGGCCGCGGGGCGGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGATCGGGAAGTGCCGGGCCGAGATGCTGGAGCACGTGCGGCGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp CCACGGAAACGGTGTGGCGGGCTGACTCGCTGCCCACCGGGTACTTaGCGCCCGTGGACTCCAGGCGGTCGGCCCAGCGCTCCAGGCGGT +
Preference number: 5 (lower is better)
Translates to: PRKRCGGLTRCPPGT*RPWTPGGRPSAPGG
Trigger: ACCGCCTGGAGCGCTGGGCCGACCGCCTGGAGTCCACGGGCGGCAAGTACCCGGTGGGCAGCGAGTCAGCCCGCCACACCGTTTCCGTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp GGAGCCCGCCGCTGGTCCGGTGGTCCAGCTCCATCTGTGCGCAGGTaGTCCGGCAGGCGGCAAACTCCTCGGGGCGGACAGAGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: GARRWSGGPAPSVRR*SGRRQTPRGGQRVV
Trigger: GACCACCCTCTGTCCGCCCCGAGGAGTTTGCCGCCTGCCGGAGCACCTGCGCACAGATGGAGCTGGACCACCGGACCAGCGGCGGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp AGCTCGCGCTCCACCTGCTTGGACACCTCGGCCAGCAGGTGCCGGTaGGTCCGCCGCACGTGCTCCAGCATCTCGGCCCGGCACTTCCCG +
Preference number: 5 (lower is better)
Translates to: SSRSTCLDTSASRCR*VRRTCSSISARHFP
Trigger: CGGGAAGTGCCGGGCCGAGATGCTGGAGCACGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGTGTCCAAGCAGGTGGAGCGCGAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp CCCTTCAGCTCGCGCTCCACCTGCTTGGACACCTCGGCCAGCAGGTaGCGGTGCGTCCGCCGCACGTGCTCCAGCATCTCGGCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PFSSRSTCLDTSASR*RCVRRTCSSISARH
Trigger: GTGCCGGGCCGAGATGCTGGAGCACGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGTGTCCAAGCAGGTGGAGCGCGAGCTGAAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp AGCTTCCCGACCGACCGGTGCAGCCCCTTCAGCTCGCGCTCCACCTaGTTGGACACCTCGGCCAGCAGGTGCCGGTGCGTCCGCCGCACG +
Preference number: 5 (lower is better)
Translates to: SFPTDRCSPFSSRST*LDTSASRCRCVRRT
Trigger: CGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGTGTCCAAGCAGGTGGAGCGCGAGCTGAAGGGGCTGCACCGGTCGGTCGGGAAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp TCTCGAGGGTCCTCGAAGATCTGCGTGTCCACGCCGGGGCTGGGCTaGCCGTCCTCGCCGGGGACCCACGGCTGGTACTGCTGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SRGSSKICVSTPGLG*PSSPGTHGWYCWAS
Trigger: CGAGGCCCAGCAGTACCAGCCGTGGGTCCCCGGCGAGGACGGGCAGCCCAGCCCCGGCGTGGACACGCAGATCTTCGAGGACCCTCGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp GCTCCAGCATCTCGGCCCGGCACTTCCCGATCTGCAGGATCACGTTaGGCTTGGCCACCTGCCCGCCCCGCGGCCCGGGGTAGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: APASRPGTSRSAGSR*AWPPARPAARGRRG
Trigger: TCCACGCCTACCCCGGGCCGCGGGGCGGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGATCGGGAAGTGCCGGGCCGAGATGCTGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp TCCCGACCGACCGGTGCAGCCCCTTCAGCTCGCGCTCCACCTGCTTaGACACCTCGGCCAGCAGGTGCCGGTGCGTCCGCCGCACGTGCT +
Preference number: 5 (lower is better)
Translates to: SRPTGAAPSARAPPA*TPRPAGAGASAARA
Trigger: AGCACGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGTGTCCAAGCAGGTGGAGCGCGAGCTGAAGGGGCTGCACCGGTCGGTCGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp CGGTGTGGCGGGCTGACTCGCTGCCCACCGGGTACTTGCCGCCCGTaGACTCCAGGCGGTCGGCCCAGCGCTCCAGGCGGTAGAACACCT +
Preference number: 5 (lower is better)
Translates to: RCGGLTRCPPGTCRP*TPGGRPSAPGGRTP
Trigger: AGGTGTTCTACCGCCTGGAGCGCTGGGCCGACCGCCTGGAGTCCACGGGCGGCAAGTACCCGGTGGGCAGCGAGTCAGCCCGCCACACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp GTAGGCGTGGAGCCCGCCGCTGGTCCGGTGGTCCAGCTCCATCTGTaGGCAGGTGCTCCGGCAGGCGGCAAACTCCTCGGGGCGGACAGA +
Preference number: 5 (lower is better)
Translates to: VGVEPAAGPVVQLHL*AGAPAGGKLLGADR
Trigger: TCTGTCCGCCCCGAGGAGTTTGCCGCCTGCCGGAGCACCTGCGCACAGATGGAGCTGGACCACCGGACCAGCGGCGGGCTCCACGCCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp TCCCGCTTGCGCCACAGGAACTGGTCCAGCGGCTCGCCCTGCTTCTaGGGCAGGTCCAGCTCGCGCTGGATGGCCTCTCGGGACAGCGTG +
Preference number: 5 (lower is better)
Translates to: SRLRHRNWSSGSPCF*GRSSSRWMASRDSV
Trigger: CACGCTGTCCCGAGAGGCCATCCAGCGCGAGCTGGACCTGCCGCAGAAGCAGGGCGAGCCGCTGGACCAGTTCCTGTGGCGCAAGCGGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp TGCTTGGACACCTCGGCCAGCAGGTGCCGGTGCGTCCGCCGCACGTaGTCCAGCATCTCGGCCCGGCACTTCCCGATCTGCAGGATCACG +
Preference number: 5 (lower is better)
Translates to: CLDTSASRCRCVRRT*SSISARHFPICRIT
Trigger: CGTGATCCTGCAGATCGGGAAGTGCCGGGCCGAGATGCTGGAGCACGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGTGTCCAAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp TACAGGTCCCGCTTGCGCCACAGGAACTGGTCCAGCGGCTCGCCCTaGTTCTGCGGCAGGTCCAGCTCGCGCTGGATGGCCTCTCGGGAC +
Preference number: 5 (lower is better)
Translates to: YRSRLRHRNWSSGSP*FCGRSSSRWMASRD
Trigger: GTCCCGAGAGGCCATCCAGCGCGAGCTGGACCTGCCGCAGAAGCAGGGCGAGCCGCTGGACCAGTTCCTGTGGCGCAAGCGGGACCTGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp CCAGCGGCTCGCCCTGCTTCTGCGGCAGGTCCAGCTCGCGCTGGATaGCCTCTCGGGACAGCGTGCCCTCGCTGTACTGCAGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: PAARPASAAGPARAG*PLGTACPRCTAGTP
Trigger: AGGAGTTCCTGCAGTACAGCGAGGGCACGCTGTCCCGAGAGGCCATCCAGCGCGAGCTGGACCTGCCGCAGAAGCAGGGCGAGCCGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp TGGTCCAGCGGCTCGCCCTGCTTCTGCGGCAGGTCCAGCTCGCGCTaGATGGCCTCTCGGGACAGCGTGCCCTCGCTGTACTGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: WSSGSPCFCGRSSSR*MASRDSVPSLYCRN
Trigger: GTTCCTGCAGTACAGCGAGGGCACGCTGTCCCGAGAGGCCATCCAGCGCGAGCTGGACCTGCCGCAGAAGCAGGGCGAGCCGCTGGACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTGCCACGGACTCGCTGTaGGGGGCGGGCGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPATDSL*GAGVRV
Trigger: GACCCTCACGCCCGCCCCCAACAGCGAGTCCGTGGC...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp TCTTCCAGCGCTGCGAGTCGCTCGTGGGCACGTAGCCGTCCAGGTTaGTCTCCAGCTTCCCGACCGACCGGTGCAGCCCCTTCAGCTCGC +
Preference number: 5 (lower is better)
Translates to: SSSAASRSWARSRPG*SPASRPTGAAPSAR
Trigger: GCGAGCTGAAGGGGCTGCACCGGTCGGTCGGGAAGCTGGAGAGCAACCTGGACGGCTACGTGCCCACGAGCGACTCGCAGCGCTGGAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp TACTCCTCTAGGTGGCTCAGGAACTCTCGAGGGTCCTCGAAGATCTaGGTGTCCACGCCGGGGCTGGGCTGCCCGTCCTCGCCGGGGACC +
Preference number: 5 (lower is better)
Translates to: YSSRWLRNSRGSSKI*VSTPGLGCPSSPGT
Trigger: GGTCCCCGGCGAGGACGGGCAGCCCAGCCCCGGCGTGGACACGCAGATCTTCGAGGACCCTCGAGAGTTCCTGAGCCACCTAGAGGAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp CCTCCTCGTCCGCGTCCACGTAGAGCGTCTGGTACAGGTCCCGCTTaGGCCACAGGAACTGGTCCAGCGGCTCGCCCTGCTTCTGCGGCA +
Preference number: 5 (lower is better)
Translates to: PPRPRPRRASGTGPA*ATGTGPAARPASAA
Trigger: TGCCGCAGAAGCAGGGCGAGCCGCTGGACCAGTTCCTGTGGCGCAAGCGGGACCTGTACCAGACGCTCTACGTGGACGCGGACGAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp CAAAGCCACAGGCTGGATGTAGTGGGCAGGCTGGGGGCTCCGGGATaGCCTCTACTCGGGCTGGGTCCGGTCACTGGCCACGGACTCGCT +
Preference number: 5 (lower is better)
Translates to: QSHRLDVVGRLGAPG*PLLGLGPVTGHGLA
Trigger: AGCGAGTCCGTGGCCAGTGACCGGACCCAGCCCGAGTAGAGGGCATCCCGGAGCCCCCAGCCTGCCCACTACATCCAGCCTGTGGCTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp GGCTCGGCCGCCTGCTCCAGGTCATCCTGCACCTCCATGCCCCTCTaGATGAGCTGCTCCAGGGTCTTGGGCAGGGGGTGGCGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: GSAACSRSSCTSMPL*MSCSRVLGRGWRRK
Trigger: TTTCCTGCGCCACCCCCTGCCCAAGACCCTGGAGCAGCTCATCCAGAGGGGCATGGAGGTGCAGGATGACCTGGAGCAGGCGGCCGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp GGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTCCTAGGATCACGTTGGGCTaGGCCACCTGCCCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GRAECLEAPQEPWLLGCPRITLG*ATCPPR
Trigger: GCGGGGCGGGCAGGTGGCCAAGCCCAACGTGATCCT...AGGACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS TCA 90 bp GCTCCAGGCGGTAGAACACCTCGCGCCACACGTGCATCTCGCGCTTaGCCCAGCGCTCCAGGTTGGCGATGGTCTCCTGGCAGCGGCACA +
Preference number: 5 (lower is better)
Translates to: APGGRTPRATRASRA*PSAPGWRWSPGSGT
Trigger: TGTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGCGAGATGCACGTGTGGCGCGAGGTGTTCTACCGCCTGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp TCCATGCCCCTCTGGATGAGCTGCTCCAGGGTCTTGGGCAGGGGGTaGCGCAGGAAACGCTTGAGCTTGGGCTGCAGGGTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: SMPLWMSCSRVLGRG*RRKRLSLGCRVPTT
Trigger: CGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGACCCTGGAGCAGCTCATCCAGAGGGGCATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTGCGAGTCCGCCCGGAGCTCGCGCTCCACCTGCTaGGACACCTCGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WVRCSHLDDTSVCESARSSRSTC*DTSASR
Trigger: CCTGCTGGCCGAGGTGTCCAAGCAGGTGGAGCGCGA...GCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGACCCAGCGCTCCAGGTaGGCGATGGTCTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWTQRSR*AMVSWQ
Trigger: CTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGT...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp GCAAGGGGCAGGGGTTGGCCACAGCCTCATGAGGTTTCCAGGGTCTTCACAGGCCTGCCCACCGGGTACTaGCCGCCCGTGGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: ARGRGWPQPHEVSRVFTGLPTGY*PPVDSR
Trigger: CCTGGAGTCCACGGGCGGCAAGTACCCGGTGGGCAG...GCCTGTGAAGACCCTGGAAACCTCATGAGGCTGTGGCCAACCCCTGCCCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGTGGTACAGGTCCCGCTaGCGCCACAGGAACTGGTCC +
Preference number: 5 (lower is better)
Translates to: CSAACATSTLPWEEGAALWYRSR*RHRNWS
Trigger: GGACCAGTTCCTGTGGCGCAAGCGGGACCTGTACCA...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TGCTCTGCTGCGTGTGCGACTTCTACTCTCCCCTGGGAGGAGGGGGCCGCGCTGTGGCGCAGGAAACGCTaGAGCTTGGGCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: CSAACATSTLPWEEGAALWRRKR*SLGCRV
Trigger: CACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCA...CAGCGCGGCCCCCTCCTCCCAGGGGAGAGTAGAAGTCGCACACGCAGCAGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS TCA 90 bp GCTCCAGGTTGGCGATGGTCTCCTGGCAGCGGCACAGGCAGGCCTTaGTGGACTTCTTCCAGCGCTGCGAGTCGCTCGTGGGCACGTAGC +
Preference number: 5 (lower is better)
Translates to: APGWRWSPGSGTGRP*WTSSSAASRSWARS
Trigger: GCTACGTGCCCACGAGCGACTCGCAGCGCTGGAAGAAGTCCATCAAGGCCTGCCTGTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp AGGGTCTTGGGCAGGGGGTGGCGCAGGAAACGCTTGAGCTTGGGCTaGAGGGTGCCCACCACGTACTGGATGATCTCCTCCTCGTCCGCG +
Preference number: 5 (lower is better)
Translates to: RVLGRGWRRKRLSLG*RVPTTYWMISSSSA
Trigger: CGCGGACGAGGAGGAGATCATCCAGTACGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp GCCTGCTCCAGGTCATCCTGCACCTCCATGCCCCTCTGGATGAGCTaGTCCAGGGTCTTGGGCAGGGGGTGGCGCAGGAAACGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: ACSRSSCTSMPLWMS*SRVLGRGWRRKRLS
Trigger: GCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGACCCTGGAGCAGCTCATCCAGAGGGGCATGGAGGTGCAGGATGACCTGGAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TGGCCCACCAGCACCAGGGTTCTGGTGTCGGGGCAGGGCAGAATGCCTGGAAGCCGGCACAGGCAGGCCTaGATGGACTTCTTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: WPTSTRVLVSGQGRMPGSRHRQA*MDFFQR
Trigger: GCGCTGGAAGAAGTCCATCAAGGCCTGCCTGTGCCG...GCTTCCAGGCATTCTGCCCTGCCCCGACACCAGAACCCTGGTGCTGGTGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TGTGGAGGGTGGGGTCCAGGCCGGAAAGACAGACGGAGGGAGGGTGATGGGTGGACGTGCATCTCGCGCTaGACCCAGCGCTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: CGGWGPGRKDRRREGDGWTCISR*TQRSRL
Trigger: CAACCTGGAGCGCTGGGTCAAGCGCGAGATGCACGT...CCACCCATCACCCTCCCTCCGTCTGTCTTTCCGGCCTGGACCCCACCCTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp TGCATCTCGCGCTTGACCCAGCGCTCCAGGTTGGCGATGGTCTCCTaGCAGCGGCACAGGCAGGCCTTGATGGACTTCTTCCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: CISRLTQRSRLAMVS*QRHRQALMDFFQRC
Trigger: GCAGCGCTGGAAGAAGTCCATCAAGGCCTGCCTGTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGCGAGATGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp CGGGGCAGGGCAGAATGCCTGGAAGCGCCCCAGGAGCCATGGCTTCTGGGATGTGTGTGGGCTGAAGACTaGTCAGAGTGGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: RGRAECLEAPQEPWLLGCVWAED*SEWSAG
Trigger: CCCTGCAGACCACTCTGACAAGTCTTCAGCCCACAC...ACATCCCAGAAGCCATGGCTCCTGGGGCGCTTCCAGGCATTCTGCCCTGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 90 bp AGCTCGCGCTGGATGGCCTCTCGGGACAGCGTGCCCTCGCTGTACTaGAGGAACTCCTTCTTGAACTCCACCCAGTTCTTCACGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SSRWMASRDSVPSLY*RNSFLNSTQFFTEP
Trigger: GGGCTCCGTGAAGAACTGGGTGGAGTTCAAGAAGGAGTTCCTGCAGTACAGCGAGGGCACGCTGTCCCGAGAGGCCATCCAGCGCGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGATCTGCAGGATCACGTaGGGCTTGGCCACCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPEICRIT*GLATCP
Trigger: CGGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGAT...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGAGGAAACGCTTGAGCTaGGGCTGCAGGGTGCCCACC +
Preference number: 5 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPERKRLS*GCRVPT
Trigger: GGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTTCCT...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp CCATCCGGACACTTGGTTTTCTGGATGTCCAGAGGGCCTGGGTGTTGTAGCAGAGGGTGTCCCATGAGCTaGGTGGCCGCTGGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: PSGHLVFWMSRGPGCCSRGCPMS*VAAGPC
Trigger: GCAGGGGCCAGCGGCCACCAAGCTCATGGGACACCC...TCTGCTACAACACCCAGGCCCTCTGGACATCCAGAAAACCAAGTGTCCGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGCTGCCTCAGCCGGATTaGAGGACTCAGCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPELPQPD*RTQPLW
Trigger: CCAGAGGGGCTGAGTCCTCAAATCCGGCTGAGGCAG...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS TCA 90 bp GAGCCCTGCTTGAACTCCCACCACTTCTTGGCCGGCCCGTTCATGTaGTTCTGGATCTGGGACAGCCAGTACTCCTCAGAGCCGCCCACC +
Preference number: 5 (lower is better)
Translates to: EPCLNSHHFLAGPFM*FWIWDSQYSSEPPT
Trigger: GGTGGGCGGCTCTGAGGAGTACTGGCTGTCCCAGATCCAGAATCACATGAACGGGCCGGCCAAGAAGTGGTGGGAGTTCAAGCAGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 90 bp CAGTACTCCTCAGAGCCGCCCACCTGCCGCAAGTACTCCTCTAGGTaGCTCAGGAACTCTCGAGGGTCCTCGAAGATCTGCGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: QYSSEPPTCRKYSSR*LRNSRGSSKICVST
Trigger: CGTGGACACGCAGATCTTCGAGGACCCTCGAGAGTTCCTGAGCCACCTAGAGGAGTACTTGCGGCAGGTGGGCGGCTCTGAGGAGTACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTGCGAGTCCGCCCGGAGCCTGCCATCCGGACACTaGGTTTTCTGGATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: WVRCSHLDDTSVCESARSLPSGH*VFWMSR
Trigger: TCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAG...GCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp AACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCCTCGCTGTGGCCCCAGCCTaGGGGCTCATGAAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: NLETCCHSPGSDGASCCLAVAPA*GLMKAS
Trigger: AGAGGCTTTCATGAGCCCCAAGGCTGGGGCCACAGC...GAGGCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TGGGTGCGGTGCTCACATCTGGATGACACGAGTGTGTGCGAGTCCGCCCGGAGCGACTTTGTGGGAACCTaGAGACCTGTTGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: WVRCSHLDDTSVCESARSDFVGT*RPVVTL
Trigger: GAGAGTGACAACAGGTCTCAAGGTTCCCACAAAGTC...GCTCCGGGCGGACTCGCACACACTCGTGTCATCCAGATGTGAGCACCGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp GGGAACCTTGAGACCTGTTGTCACTCTCCTGGCTCTGATGGTGCCAGCTGCTGCTTCACGGAGCCCTGCTaGAACTCCCACCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: GNLETCCHSPGSDGASCCFTEPC*NSHHFL
Trigger: CAAGAAGTGGTGGGAGTTCAAGCAGGGCTCCGTGAA...GCAGCAGCTGGCACCATCAGAGCCAGGAGAGTGACAACAGGTCTCAAGGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS-3UTR CAA 90 bp TTGGTGGCCGCTGGCCCCTGCCATCCGGACACTTGGTTTTCTGGATGTCCAGAGAAGCCTGTGCCAGCCTaGAGGATTGGTTATGGCTTA +
Preference number: 5 (lower is better)
Translates to: LVAAGPCHPDTWFSGCPEKPVPA*RIGYGL
Trigger: TAAGCCATAACCAATCCTCAAGGCTGGCACAGGCTT...CTCTGGACATCCAGAAAACCAAGTGTCCGGATGGCAGGGGCCAGCGGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp GGCTGCCCGTCCTCGCCGGGGACCCACGGCTGGTACTaGTGGGCCTCGGCGGGCTCCTGCCCGGGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: GCPSSPGTHGWY*WASAGSCPGSS
Trigger: CGAGCTGCCCGGGCAGGAGCCCGCCGAGGCCCAGCAGTACCAGCCGTGGGTCCCCGGCGAGGACGGGCAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp GGCGTGAGGGTCTCCGCCTCATCCTCCACCGGGAGGTaGGGGCCGGCCGGCTCGGCCGCCTGCTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: GVRVSASSSTGR*GPAGSAACSRS
Trigger: TGACCTGGAGCAGGCGGCCGAGCCGGCCGGCCCCCACCTCCCGGTGGAGGATGAGGCGGAGACCCTCACGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp GGGCTGACTCGCTGCCCACCGGGTACTTGCCGCCCGTaGACTCCAGGCGGTCGGCCCAGCGCTCCAGGCGGT +
Preference number: 6 (lower is better)
Translates to: GLTRCPPGTCRP*TPGGRPSAPGG
Trigger: ACCGCCTGGAGCGCTGGGCCGACCGCCTGGAGTCCACGGGCGGCAAGTACCCGGTGGGCAGCGAGTCAGCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 72 bp ACGGTGTGGCGGGCTGACTCGCTGCCCACCGGGTACTaGCCGCCCGTGGACTCCAGGCGGTCGGCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: TVWRADSLPTGY*PPVDSRRSAQR
Trigger: GCGCTGGGCCGACCGCCTGGAGTCCACGGGCGGCAAGTACCCGGTGGGCAGCGAGTCAGCCCGCCACACCGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 90 bp CCCACGGAAACGGTGTGGCGGGCTGACTCGCTGCCCACCGGGTACTaGCCGCCCGTGGACTCCAGGCGGTCGGCCCAGCGCTCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: PTETVWRADSLPTGY*PPVDSRRSAQRSRR
Trigger: CCGCCTGGAGCGCTGGGCCGACCGCCTGGAGTCCACGGGCGGCAAGTACCCGGTGGGCAGCGAGTCAGCCCGCCACACCGTTTCCGTGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp CCCGGCACTTCCCGATCTGCAGGATCACGTTGGGCTTaGCCACCTGCCCGCCCCGCGGCCCGGGGTAGGCGT +
Preference number: 6 (lower is better)
Translates to: PGTSRSAGSRWA*PPARPAARGRR
Trigger: ACGCCTACCCCGGGCCGCGGGGCGGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGATCGGGAAGTGCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp TCTCGGCCCGGCACTTCCCGATCTGCAGGATCACGTTaGGCTTGGCCACCTGCCCGCCCCGCGGCCCGGGGT +
Preference number: 6 (lower is better)
Translates to: SRPGTSRSAGSR*AWPPARPAARG
Trigger: ACCCCGGGCCGCGGGGCGGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGATCGGGAAGTGCCGGGCCGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp GAGGGTCCTCGAAGATCTGCGTGTCCACGCCGGGGCTaGGCTGCCCGTCCTCGCCGGGGACCCACGGCTGGT +
Preference number: 6 (lower is better)
Translates to: EGPRRSACPRRG*AARPRRGPTAG
Trigger: ACCAGCCGTGGGTCCCCGGCGAGGACGGGCAGCCCAGCCCCGGCGTGGACACGCAGATCTTCGAGGACCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 72 bp ATCTCGGCCCGGCACTTCCCGATCTGCAGGATCACGTaGGGCTTGGCCACCTGCCCGCCCCGCGGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: ISARHFPICRIT*GLATCPPRGPG
Trigger: CCCCGGGCCGCGGGGCGGGCAGGTGGCCAAGCCCAACGTGATCCTGCAGATCGGGAAGTGCCGGGCCGAGAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp GAGCCCGCCGCTGGTCCGGTGGTCCAGCTCCATCTGTaGGCAGGTGCTCCGGCAGGCGGCAAACTCCTCGGG +
Preference number: 6 (lower is better)
Translates to: EPAAGPVVQLHL*AGAPAGGKLLG
Trigger: CCCGAGGAGTTTGCCGCCTGCCGGAGCACCTGCGCACAGATGGAGCTGGACCACCGGACCAGCGGCGGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp ACCTCGGCCAGCAGGTGCCGGTGCGTCCGCCGCACGTaGTCCAGCATCTCGGCCCGGCACTTCCCGATCTGC +
Preference number: 6 (lower is better)
Translates to: TSASRCRCVRRT*SSISARHFPIC
Trigger: GCAGATCGGGAAGTGCCGGGCCGAGATGCTGGAGCACGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp TCCACCTGCTTGGACACCTCGGCCAGCAGGTGCCGGTaGGTCCGCCGCACGTGCTCCAGCATCTCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: STCLDTSASRCR*VRRTCSSISAR
Trigger: CCGGGCCGAGATGCTGGAGCACGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGTGTCCAAGCAGGTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp CCACGCCCACGGAAACGGTGTGGCGGGCTGACTCGCTaGCCACCGGGTACTTGCCGCCCGTGGACTCCAGGC +
Preference number: 6 (lower is better)
Translates to: PRPRKRCGGLTR*PPGTCRPWTPG
Trigger: GCCTGGAGTCCACGGGCGGCAAGTACCCGGTGGGCAGCGAGTCAGCCCGCCACACCGTTTCCGTGGGCGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp TCCTCGAAGATCTGCGTGTCCACGCCGGGGCTGGGCTaGCCGTCCTCGCCGGGGACCCACGGCTGGTACTGC +
Preference number: 6 (lower is better)
Translates to: SSKICVSTPGLG*PSSPGTHGWYC
Trigger: GCAGTACCAGCCGTGGGTCCCCGGCGAGGACGGGCAGCCCAGCCCCGGCGTGGACACGCAGATCTTCGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 72 bp TCGGGCTGGGTCCGGTCACTGGCCACGGACTCGCTGTaGGGGGCGGGCGTGAGGGTCTCCGCCTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: SGWVRSLATDSL*GAGVRVSASSS
Trigger: GGAGGATGAGGCGGAGACCCTCACGCCCGCCCCCAACAGCGAGTCCGTGGCCAGTGACCGGACCCAGCCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp CGCTGGTCCGGTGGTCCAGCTCCATCTGTGCGCAGGTaGTCCGGCAGGCGGCAAACTCCTCGGGGCGGACAG +
Preference number: 6 (lower is better)
Translates to: RWSGGPAPSVRR*SGRRQTPRGGQ
Trigger: CTGTCCGCCCCGAGGAGTTTGCCGCCTGCCGGAGCACCTGCGCACAGATGGAGCTGGACCACCGGACCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp TCGCGCTCCACCTGCTTGGACACCTCGGCCAGCAGGTaGCGGTGCGTCCGCCGCACGTGCTCCAGCATCTCG +
Preference number: 6 (lower is better)
Translates to: SRSTCLDTSASR*RCVRRTCSSIS
Trigger: CGAGATGCTGGAGCACGTGCGGCGGACGCACCGGCACCTGCTGGCCGAGGTGTCCAAGCAGGTGGAGCGCGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp CGCTTGCGCCACAGGAACTGGTCCAGCGGCTCGCCCTaGTTCTGCGGCAGGTCCAGCTCGCGCTGGATGGCC +
Preference number: 6 (lower is better)
Translates to: RLRHRNWSSGSP*FCGRSSSRWMA
Trigger: GGCCATCCAGCGCGAGCTGGACCTGCCGCAGAAGCAGGGCGAGCCGCTGGACCAGTTCCTGTGGCGCAAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp GGCTCGCCCTGCTTCTGCGGCAGGTCCAGCTCGCGCTaGATGGCCTCTCGGGACAGCGTGCCCTCGCTGTAC +
Preference number: 6 (lower is better)
Translates to: GSPCFCGRSSSR*MASRDSVPSLY
Trigger: GTACAGCGAGGGCACGCTGTCCCGAGAGGCCATCCAGCGCGAGCTGGACCTGCCGCAGAAGCAGGGCGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp GCTGCGAGTCGCTCGTGGGCACGTAGCCGTCCAGGTTaGTCTCCAGCTTCCCGACCGACCGGTGCAGCCCCT +
Preference number: 6 (lower is better)
Translates to: AASRSWARSRPG*SPASRPTGAAP
Trigger: AGGGGCTGCACCGGTCGGTCGGGAAGCTGGAGAGCAACCTGGACGGCTACGTGCCCACGAGCGACTCGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp AGGCTGGATGTAGTGGGCAGGCTGGGGGCTCCGGGATaGCCTCTACTCGGGCTGGGTCCGGTCACTGGCCAC +
Preference number: 6 (lower is better)
Translates to: RLDVVGRLGAPG*PLLGLGPVTGH
Trigger: GTGGCCAGTGACCGGACCCAGCCCGAGTAGAGGGCATCCCGGAGCCCCCAGCCTGCCCACTACATCCAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp CGCCCTGCTTCTGCGGCAGGTCCAGCTCGCGCTGGATaGCCTCTCGGGACAGCGTGCCCTCGCTGTACTGCA +
Preference number: 6 (lower is better)
Translates to: RPASAAGPARAG*PLGTACPRCTA
Trigger: TGCAGTACAGCGAGGGCACGCTGTCCCGAGAGGCCATCCAGCGCGAGCTGGACCTGCCGCAGAAGCAGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp CCGTCCAGGTTGCTCTCCAGCTTCCCGACCGACCGGTaGAGCCCCTTCAGCTCGCGCTCCACCTGCTTGGAC +
Preference number: 6 (lower is better)
Translates to: PSRLLSSFPTDR*SPFSSRSTCLD
Trigger: GTCCAAGCAGGTGGAGCGCGAGCTGAAGGGGCTGCACCGGTCGGTCGGGAAGCTGGAGAGCAACCTGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp AGGTGGCTCAGGAACTCTCGAGGGTCCTCGAAGATCTaGGTGTCCACGCCGGGGCTGGGCTGCCCGTCCTCG +
Preference number: 6 (lower is better)
Translates to: RWLRNSRGSSKI*VSTPGLGCPSS
Trigger: CGAGGACGGGCAGCCCAGCCCCGGCGTGGACACGCAGATCTTCGAGGACCCTCGAGAGTTCCTGAGCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp CCGCGTCCACGTAGAGCGTCTGGTACAGGTCCCGCTTaGGCCACAGGAACTGGTCCAGCGGCTCGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: PRPRRASGTGPA*ATGTGPAARPA
Trigger: AGCAGGGCGAGCCGCTGGACCAGTTCCTGTGGCGCAAGCGGGACCTGTACCAGACGCTCTACGTGGACGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp AGCGTCTGGTACAGGTCCCGCTTGCGCCACAGGAACTaGTCCAGCGGCTCGCCCTGCTTCTGCGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SVWYRSRLRHRN*SSGSPCFCGRS
Trigger: GGACCTGCCGCAGAAGCAGGGCGAGCCGCTGGACCAGTTCCTGTGGCGCAAGCGGGACCTGTACCAGACGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 72 bp CACACGTGCATCTCGCGCTTGACCCAGCGCTCCAGGTaGGCGATGGTCTCCTGGCAGCGGCACAGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: HTCISRLTQRSR*AMVSWQRHRQA
Trigger: GGCCTGCCTGTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGCGAGATGCACGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 90 bp ACCTCGCGCCACACGTGCATCTCGCGCTTGACCCAGCGCTCCAGGTaGGCGATGGTCTCCTGGCAGCGGCACAGGCAGGCCTTGATGGAC +
Preference number: 6 (lower is better)
Translates to: TSRHTCISRLTQRSR*AMVSWQRHRQALMD
Trigger: GTCCATCAAGGCCTGCCTGTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGCGAGATGCACGTGTGGCGCGAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 72 bp TCCAGGGTCTTGGGCAGGGGGTGGCGCAGGAAACGCTaGAGCTTGGGCTGCAGGGTGCCCACCACGTACTGG +
Preference number: 6 (lower is better)
Translates to: SRVLGRGWRRKR*SLGCRVPTTYW
Trigger: CCAGTACGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGACCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS TCA 72 bp GGTAGAACACCTCGCGCCACACGTGCATCTCGCGCTTaGCCCAGCGCTCCAGGTTGGCGATGGTCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: GRTPRATRASRA*PSAPGWRWSPG
Trigger: GCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCGCGAGATGCACGTGTGGCGCGAGGTGTTCTACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp GGCAGGGGGTGGCGCAGGAAACGCTTGAGCTTGGGCTaGAGGGTGCCCACCACGTACTGGATGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GRGWRRKRLSLG*RVPTTYWMISS
Trigger: GGAGGAGATCATCCAGTACGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCACCCCCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp CTCTGGATGAGCTGCTCCAGGGTCTTGGGCAGGGGGTaGCGCAGGAAACGCTTGAGCTTGGGCTGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: LWMSCSRVLGRG*RRKRLSLGCRV
Trigger: CACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGACCCTGGAGCAGCTCATCCAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 90 bp TGCTCCAGGGTCTTGGGCAGGGGGTGGCGCAGGAAACGCTTGAGCTaGGGCTGCAGGGTGCCCACCACGTACTGGATGATCTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: CSRVLGRGWRRKRLS*GCRVPTTYWMISSS
Trigger: CGAGGAGGAGATCATCCAGTACGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGACCCTGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp CGCTTGACCCAGCGCTCCAGGTTGGCGATGGTCTCCTaGCAGCGGCACAGGCAGGCCTTGATGGACTTCTTC +
Preference number: 6 (lower is better)
Translates to: RLTQRSRLAMVS*QRHRQALMDFF
Trigger: GAAGAAGTCCATCAAGGCCTGCCTGTGCCGCTGCCAGGAGACCATCGCCAACCTGGAGCGCTGGGTCAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 72 bp TTGGCGATGGTCTCCTGGCAGCGGCACAGGCAGGCCTaGATGGACTTCTTCCAGCGCTGCGAGTCGCTCGTG +
Preference number: 6 (lower is better)
Translates to: LAMVSWQRHRQA*MDFFQRCESLV
Trigger: CACGAGCGACTCGCAGCGCTGGAAGAAGTCCATCAAGGCCTGCCTGTGCCGCTGCCAGGAGACCATCGCCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 72 bp GTCTTGGGCAGGGGGTGGCGCAGGAAACGCTTGAGCTaGGGCTGCAGGGTGCCCACCACGTACTGGATGATC +
Preference number: 6 (lower is better)
Translates to: VLGRGWRRKRLS*GCRVPTTYWMI
Trigger: GATCATCCAGTACGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 90 bp ATGAGCTGCTCCAGGGTCTTGGGCAGGGGGTGGCGCAGGAAACGCTaGAGCTTGGGCTGCAGGGTGCCCACCACGTACTGGATGATCTCC +
Preference number: 6 (lower is better)
Translates to: MSCSRVLGRGWRRKR*SLGCRVPTTYWMIS
Trigger: GGAGATCATCCAGTACGTGGTGGGCACCCTGCAGCCCAAGCTCAAGCGTTTCCTGCGCCACCCCCTGCCCAAGACCCTGGAGCAGCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CCA 72 bp TCAGAGCCGCCCACCTGCCGCAAGTACTCCTCTAGGTaGCTCAGGAACTCTCGAGGGTCCTCGAAGATCTGC +
Preference number: 6 (lower is better)
Translates to: SEPPTCRKYSSR*LRNSRGSSKIC
Trigger: GCAGATCTTCGAGGACCCTCGAGAGTTCCTGAGCCACCTAGAGGAGTACTTGCGGCAGGTGGGCGGCTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS CAA 90 bp GCCTCTCGGGACAGCGTGCCCTCGCTGTACTGCAGGAACTCCTTCTaGAACTCCACCCAGTTCTTCACGGAGCCCTGCTTGAACTCCCAC +
Preference number: 6 (lower is better)
Translates to: ASRDSVPSLYCRNSF*NSTQFFTEPCLNSH
Trigger: GTGGGAGTTCAAGCAGGGCTCCGTGAAGAACTGGGTGGAGTTCAAGAAGGAGTTCCTGCAGTACAGCGAGGGCACGCTGTCCCGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp ATCTGGGACAGCCAGTACTCCTCAGAGCCGCCCACCTaGCGCAAGTACTCCTCTAGGTGGCTCAGGAACTCT +
Preference number: 6 (lower is better)
Translates to: IWDSQYSSEPPT*RKYSSRWLRNS
Trigger: AGAGTTCCTGAGCCACCTAGAGGAGTACTTGCGGCAGGTGGGCGGCTCTGAGGAGTACTGGCTGTCCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp TCCTTCTTGAACTCCACCCAGTTCTTCACGGAGCCCTaGTTGAACTCCCACCACTTCTTGGCCGGCCCGTTC +
Preference number: 6 (lower is better)
Translates to: SFLNSTQFFTEP*LNSHHFLAGPF
Trigger: GAACGGGCCGGCCAAGAAGTGGTGGGAGTTCAAGCAGGGCTCCGTGAAGAACTGGGTGGAGTTCAAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS GCA 72 bp TGGATGGCCTCTCGGGACAGCGTGCCCTCGCTGTACTaGAGGAACTCCTTCTTGAACTCCACCCAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: WMASRDSVPSLY*RNSFLNSTQFF
Trigger: GAAGAACTGGGTGGAGTTCAAGAAGGAGTTCCTGCAGTACAGCGAGGGCACGCTGTCCCGAGAGGCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4
CDS TCA 72 bp TTGAACTCCCACCACTTCTTGGCCGGCCCGTTCATGTaGTTCTGGATCTGGGACAGCCAGTACTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: LNSHHFLAGPFM*FWIWDSQYSSE
Trigger: CTCTGAGGAGTACTGGCTGTCCCAGATCCAGAATCACATGAACGGGCCGGCCAAGAAGTGGTGGGAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356613.4