RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000186635

Ensembl transcript IDs: ENST00000334211.12, ENST00000359373.9, ENST00000393605.7, ENST00000393609.8, ENST00000426523.5, ENST00000427971.6, ENST00000429686.5, ENST00000452383.2, ENST00000455638.6, ENST00000465814.5, ENST00000495878.5, ENST00000536885.1, ENST00000536993.5, ENST00000541623.5, ENST00000542264.1, ENST00000542596.5, ENST00000543868.1, ENST00000544721.5, ENST00000544958.5, ENST00000546293.1

Found 1177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATGCCCATCTCTCCAGCCCCACAAGGACAGTGAACCCGGTGGGGTaGGCAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGG +
Preference number: 1 (lower is better)
Translates to: YAHLSSPTRTVNPVG*AGWAKRSEHLDRVG
Trigger: CCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTGCTCACCCCACCGGGTTCACTGTCCTTGTGGGGCTGGAGAGATGGGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR TCA 90 bp GCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTaGGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGA +
Preference number: 1 (lower is better)
Translates to: AALSPVEAQPRAPSP*AECSSTAPAFCCSG
Trigger: TCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR GCA 90 bp CTCACGCCTCTGAAAGGGTGGTGGTCCTCCCAAGTTCCTGACTTATaGCCATCTCTCCAGCCCCACAAGGACAGTGAACCCGGTGGGGTG +
Preference number: 1 (lower is better)
Translates to: LTPLKGWWSSQVPDL*PSLQPHKDSEPGGV
Trigger: CACCCCACCGGGTTCACTGTCCTTGTGGGGCTGGAGAGATGGGCATAAGTCAGGAACTTGGGAGGACCACCACCCTTTCAGAGGCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR TCA 90 bp TCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTaGGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTG +
Preference number: 1 (lower is better)
Translates to: SQPCRSSAKSSLPVS*VLLYSTRFLLFWSL
Trigger: CAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCAGGGCCTCACGCCTCTaGAAGGGTGGTGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPRASRL*KGGGPP
Trigger: GGGAGGACCACCACCCTTTCAGAGGCGTGAGGCCCT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGCCCCACAAGGACAGTaGACCCGGTGGGGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: KLSQELPPRELSAPLQHPAPQGQ*TRWGEQ
Trigger: CTGCTCACCCCACCGGGTTCACTGTCCTTGTGGGGC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGTGAACCCGGTGGGGTaGGCAGGTTGGGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAVNPVG*AGWAKR
Trigger: CCTCTTGGCCCAACCTGCTCACCCCACCGGGTTCAC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGTGAACCCGGTGGGGTaGGCAGGTTGGGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVVNPVG*AGWAKR
Trigger: CCTCTTGGCCCAACCTGCTCACCCCACCGGGTTCAC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAGGGCCTCACGCCTCTaGAAGGGTGGTGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVRASRL*KGGGPP
Trigger: GGGAGGACCACCACCCTTTCAGAGGCGTGAGGCCCT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCATGTGGGTTGTGGGGTaGAGTTTCCCATGCACCCCC +
Preference number: 2 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPMWVVG*SFPCTP
Trigger: GGGGGTGCATGGGAAACTGCACCCCACAACCCACAT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCAGCATAAGGGGTGTCTaGACAGAAGGCTTCCAGCGG +
Preference number: 2 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSIRGV*TEGFQR
Trigger: CCGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGGTTCCTGCCCAGGCTaGCCCCTGCTGCCTCCCACC +
Preference number: 2 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEGSCPG*PLLPPT
Trigger: GGTGGGAGGCAGCAGGGGTCAGCCTGGGCAGGAACC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTTGGGCCAAGAGGTCTaGACACCTGGACAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPLGQEV*TPGQSW
Trigger: CCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCCCTCTGAAAGGGTGGTaGTCCTCCCAAGTTCCTGAC +
Preference number: 2 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPPLKGW*SSQVPD
Trigger: GTCAGGAACTTGGGAGGACCACCACCCTTTCAGAGG...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCAGAGCTCCCTCCCCGTaGGCTGAGTGCTCCTCTACA +
Preference number: 2 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSARAPSP*AECSST
Trigger: TGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTCAGGATGGAGGATGTaGGTTGTGGGGTGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSGWRM*VVGCSF
Trigger: GAAACTGCACCCCACAACCCACATCCTCCATCCTGA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGAGGGCCTCACGCCTCTaGAAGGGTGGTGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: AECSSTAPAFCCSGVCWERASRL*KGGGPP
Trigger: GGGAGGACCACCACCCTTTCAGAGGCGTGAGGCCCT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTATGTGGGTTGTGGGGTaGAGTTTCCCATGCACCCCC +
Preference number: 2 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVMWVVG*SFPCTP
Trigger: GGGGGTGCATGGGAAACTGCACCCCACAACCCACAT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGATGTGGGTTGTGGGGTaGAGTTTCCCATGCACCCCC +
Preference number: 2 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALMWVVG*SFPCTP
Trigger: GGGGGTGCATGGGAAACTGCACCCCACAACCCACAT...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCATGTGGGTTGTGGGGTaGAGTTTCCCATGCACCCCC +
Preference number: 2 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAMWVVG*SFPCTP
Trigger: GGGGGTGCATGGGAAACTGCACCCCACAACCCACAT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATGCCGGGGAACCCCATaGTGCAGTCAGGATGGAGGA +
Preference number: 2 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRCRGTP*CSQDGG
Trigger: TCCTCCATCCTGACTGCAGCATGGGGTTCCCCGGCA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGGAGGATGTGGGTTGTaGGGTGCAGTTTCCCATGCA +
Preference number: 2 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVGGCGL*GAVSHA
Trigger: TGCATGGGAAACTGCACCCCACAACCCACATCCTCC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGACGCCTCTGAAAGGGTaGTGGTCCTCCCAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVTPLKG*WSSQVP
Trigger: AGGAACTTGGGAGGACCACCACCCTTTCAGAGGCGT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGAGCATAAGGGGTGTCTaGACAGAAGGCTTCCAGCGG +
Preference number: 2 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALSIRGV*TEGFQR
Trigger: CCGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCT...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAGCATAAGGGGTGTCTaGACAGAAGGCTTCCAGCGG +
Preference number: 2 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVSIRGV*TEGFQR
Trigger: CCGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCTTGGGCCAAGAGGTCTaGACACCTGGACAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSALGQEV*TPGQSW
Trigger: CCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAA...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGTCCTCCCAAGTTCCTaGCTTATGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: KLSQELPPRELSAPLQHPVLPSS*LMPISP
Trigger: TGGAGAGATGGGCATAAGTCAGGAACTTGGGAGGAC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGGAGGATGTGGGTTGTaGGGTGCAGTTTCCCATGCA +
Preference number: 2 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAGGCGL*GAVSHA
Trigger: TGCATGGGAAACTGCACCCCACAACCCACATCCTCC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCCTCTGAAAGGGTGGTaGTCCTCCCAAGTTCCTGAC +
Preference number: 2 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAPLKGW*SSQVPD
Trigger: GTCAGGAACTTGGGAGGACCACCACCCTTTCAGAGG...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGACGCCTCTGAAAGGGTaGTGGTCCTCCCAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALTPLKG*WSSQVP
Trigger: AGGAACTTGGGAGGACCACCACCCTTTCAGAGGCGT...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTACGCCTCTGAAAGGGTaGTGGTCCTCCCAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVTPLKG*WSSQVP
Trigger: AGGAACTTGGGAGGACCACCACCCTTTCAGAGGCGT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAAGCATAAGGGGTGTCTaGACAGAAGGCTTCCAGCGG +
Preference number: 2 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRSIRGV*TEGFQR
Trigger: CCGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATTGGGCCAAGAGGTCTaGACACCTGGACAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRLGQEV*TPGQSW
Trigger: CCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGTCCTCCCAAGTTCCTaGCTTATGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVVLPSS*LMPISP
Trigger: TGGAGAGATGGGCATAAGTCAGGAACTTGGGAGGAC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCAAGTTCCTGACTTATaGCCATCTCTCCAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALQVPDL*PSLQPH
Trigger: GTGGGGCTGGAGAGATGGGCATAAGTCAGGAACTTG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGGAGGATGTGGGTTGTaGGGTGCAGTTTCCCATGCA +
Preference number: 2 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRGGCGL*GAVSHA
Trigger: TGCATGGGAAACTGCACCCCACAACCCACATCCTCC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTCAGGATGGAGGATGTaGGTTGTGGGGTGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVSGWRM*VVGCSF
Trigger: GAAACTGCACCCCACAACCCACATCCTCCATCCTGA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAATGCTGCAGTCAGGATaGAGGATGTGGGTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRMLQSG*RMWVVG
Trigger: CCCCACAACCCACATCCTCCATCCTGACTGCAGCAT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAATGCTGCAGTCAGGATaGAGGATGTGGGTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPMLQSG*RMWVVG
Trigger: CCCCACAACCCACATCCTCCATCCTGACTGCAGCAT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCATGCTGCAGTCAGGATaGAGGATGTGGGTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAMLQSG*RMWVVG
Trigger: CCCCACAACCCACATCCTCCATCCTGACTGCAGCAT...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR TCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGTCCTCCCAAGTTCCTaGCTTATGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRVLPSS*LMPISP
Trigger: TGGAGAGATGGGCATAAGTCAGGAACTTGGGAGGAC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGATGCTGCAGTCAGGATaGAGGATGTGGGTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEMLQSG*RMWVVG
Trigger: CCCCACAACCCACATCCTCCATCCTGACTGCAGCAT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCCTCTGAAAGGGTGGTaGTCCTCCCAAGTTCCTGAC +
Preference number: 2 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEPLKGW*SSQVPD
Trigger: GTCAGGAACTTGGGAGGACCACCACCCTTTCAGAGG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR CCA 72 bp TCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTaGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCC +
Preference number: 3 (lower is better)
Translates to: STAPAFCCSGVC*EEQGAPFRQGP
Trigger: GGGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CAA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCTGTTCTGGAGTTTGTaGGGAGGAGCAGGGGGCTCC +
Preference number: 3 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVLFWSL*GGAGGS
Trigger: GGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CAA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTGCTGTTCTGGAGTTaGTTGGGAGGAGCAGGGGGC +
Preference number: 3 (lower is better)
Translates to: KLSQELPPRELSAPLQHPLLFWS*LGGAGG
Trigger: GCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR TCA 72 bp GAACCCGGTGGGGTGAGCAGGTTGGGCCAAGAGGTCTaGACACCTGGACAGAGTTGGGAGAGGTTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: EPGGVSRLGQEV*TPGQSWERFLP
Trigger: GGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTGCTCACCCCACCGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CAA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGGCTCACATCAGGCCTaGGAGCATAAGGGGTGTCTG +
Preference number: 3 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVGSHQA*EHKGCL
Trigger: CAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CAA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCTGCTGTTCTGGAGTTaGTTGGGAGGAGCAGGGGGC +
Preference number: 3 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALLLFWS*LGGAGG
Trigger: GCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR TCA 72 bp AGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTaGGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGC +
Preference number: 3 (lower is better)
Translates to: SPVEAQPRAPSP*AECSSTAPAFC
Trigger: GCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR-3UTR CAA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAACACCTGGACAGAGTaGGGAGAGGTTCCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVNTWTE*GEVPAQ
Trigger: CTGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR TCA 72 bp CACGCCTCTGAAAGGGTGGTGGTCCTCCCAAGTTCCTaGCTTATGCCCATCTCTCCAGCCCCACAAGGACAG +
Preference number: 3 (lower is better)
Translates to: HASERVVVLPSS*LMPISPAPQGQ
Trigger: CTGTCCTTGTGGGGCTGGAGAGATGGGCATAAGTCAGGAACTTGGGAGGACCACCACCCTTTCAGAGGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR TCA 72 bp TGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTaGGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTC +
Preference number: 3 (lower is better)
Translates to: CRSSAKSSLPVS*VLLYSTRFLLF
Trigger: GAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTTCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGGGTGCAGGGGCCGGTaGGGTATGGGCACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPGCRGR*GMGTEQ
Trigger: CTGCTCCGTGCCCATACCTCACCGGCCCCTGCACCC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCCTGCCCCGCCTGCTCTaGAAGAGCCAGGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPLPRLL*KSQGRG
Trigger: CCCACGCCCCTGGCTCTTGCAGAGCAGGCGGGGCAG...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCATCGTGGAAGCCACCTaGGGGCAGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPIVEAT*GQAQAQ
Trigger: CTGGGCCTGGGCCTGCCCTCAGGTGGCTTCCACGAT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGGTGGCACCGCCGGGTaGTGGGGCTGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVGGTAG*WGCCWA
Trigger: AGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCCACC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCAGCGTCTGCCCCGCCTaGTCTGCAAGAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSVCPA*SARARG
Trigger: GCCCCTGGCTCTTGCAGAGCAGGCGGGGCAGACGCT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCCCAGGTGGCTGTCCGTaGCCAGCCCGTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPPGGCP*PARAGW
Trigger: CCATCCTGCACGGGCTGGGCACGGACAGCCACCTGG...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTCTCAGGCCGGTGACTaGTCTCAGGGGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSQAGD*SQGPRS
Trigger: GGAGCGGGGCCCCTGAGACCAGTCACCGGCCTGAGA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCCCCCCGAGAAGCAGTTaGTCCCAGCCCCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPPPRSS*SQPHSP
Trigger: TGGGCTGTGGGGCTGGGATCAACTGCTTCTCGGGGG...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGCTGCTCGCCCTCCTTaGGGTGCACAGAGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPAARPP*GAQSAH
Trigger: ATGCGCGCTCTGTGCACCTCAAGGAGGGCGAGCAGC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGCCCCACAAGGACAGTaGACCCGGTGGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPAPQGQ*TRWGEQ
Trigger: CTGCTCACCCCACCGGGTTCACTGTCCTTGTGGGGC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGTAGTCCTCAGGGTCTaGCAGGCAGCTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPVVLRV*QAAGHP
Trigger: GGGGTGCCCAGCTGCCTGTCAGACCCTGAGGACTAC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393605.7
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTCGTGTACCTGCCCGTaGAAGCCTGGGTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSCTCP*KPGSRL
Trigger: CAGGCGGGACCCAGGCTTGCACGGGCAGGTACACGA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGCCTGCTGCAGGGCCTaGATCCACTCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPACCRA*IHSFRS
Trigger: GGAGCGGAAGGAGTGGATGCAGGCCCTGCAGCAGGC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCGGGCCCGGGCACGCTaGTCAGCCATGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGRARAR*SAMACC
Trigger: GCAGCAGGCCATGGCTGAGCAGCGTGCCCGGGCCCG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGCGCCCAGGCCACGGTaGTCCCCTGCACAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVAPRPR*SPAQRL
Trigger: CAAGCGCTGTGCAGGGGAGCACCGTGGCCTGGGCGC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGCGCCCAGGCCACGGTaGTCCCCTGCACAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPAPRPR*SPAQRL
Trigger: CAAGCGCTGTGCAGGGGAGCACCGTGGCCTGGGCGC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGGTGGCACCGCCGGGTaGTGGGGCTGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAGGTAG*WGCCWA
Trigger: AGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCCACC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCACAGAGCGCGCATCCTaGCGCAGGCTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPTERAS*RRLSSS
Trigger: GCTGCTGGAGAGCCTGCGGCAGGATGCGCGCTCTGT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGCAGGCCAGCCAGGATaGGGCGGCGGTGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVAGQPG*GGGDQG
Trigger: TCCCTGGTCACCGCCGCCGCATCCTGGCTGGCCTGC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCTGGCCCCTGGCCCCTaGGTGGGTCTGAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVLAPGP*VGLRLR
Trigger: ACGCAGCCTCAGACCCACCCAGGGGCCAGGGGCCAG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGGTCATCACTCTGGCTaGGGCCCCCGGCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPGHHSG*GPRPLL
Trigger: GAGGAGGGGCCGGGGGCCCCAGCCAGAGTGATGACC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCCTCGCTCAGCAGACTaGCCACGCGCACGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVPRSAD*PRARPV
Trigger: CACGGGCCGTGCGCGTGGCCAGTCTGCTGAGCGAGG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGGCACCGCCGGGTGCTaGGGCTGCTGCTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGGTAGC*GCCWAA
Trigger: TGCAGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGGCACCGCCGGGTGCTaGGGCTGCTGCTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALGTAGC*GCCWAA
Trigger: TGCAGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTGCCCTCACGGTACTTaGCCTCCAGGTGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPCPHGT*PPGGTA
Trigger: GGCGGTGCCACCTGGAGGCCAAGTACCGTGAGGGCA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCCATGCTGGGTCCCACTaGCAGTGCCAGCCACGCGCA +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPHAGSH*QCQPRA
Trigger: TGCGCGTGGCTGGCACTGCCAGTGGGACCCAGCATG...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGCTGGGTCTTGGGGCTaGGGACTCCCACAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPAGSWG*GLPQLR
Trigger: CCGGAGCTGTGGGAGTCCTCAGCCCCAAGACCCAGC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCCCCAGCCAACCCATaGAGTCCAGCCGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPPANP*SPAAAR
Trigger: GCGAGCGGCGGCTGGACTTCATGGGTTGGCTGGGGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCACTGTGGCCCGGTTaGCAGGGGGCAGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSLWPG*QGAAAP
Trigger: TGGTGCGGCTGCCCCCTGTCAACCGGGCCACAGTGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGACAGAGGGTCCGCGGTaGAGGCAGCCACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPTEGPR*RQPHSG
Trigger: GCCGGAGTGTGGCTGCCTTCACCGCGGACCCTCTGT...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGGTTCCTGCCCAGGCTaGCCCCTGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALGSCPG*PLLPPT
Trigger: GGTGGGAGGCAGCAGGGGTCAGCCTGGGCAGGAACC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGGTTCCTGCCCAGGCTaGCCCCTGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAGSCPG*PLLPPT
Trigger: GGTGGGAGGCAGCAGGGGTCAGCCTGGGCAGGAACC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGGGTGCAGGGGCCGGTaGGGTATGGGCACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGGCRGR*GMGTEQ
Trigger: CTGCTCCGTGCCCATACCTCACCGGCCCCTGCACCC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTCAGCCATGGCCTGCTaGAGGGCCTGCATCCACTCC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSAMAC*RACIHS
Trigger: GGAGTGGATGCAGGCCCTGCAGCAGGCCATGGCTGA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCGGGCCCGGGCACGCTaGTCAGCCATGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPARARAR*SAMACC
Trigger: GCAGCAGGCCATGGCTGAGCAGCGTGCCCGGGCCCG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACGGGCCCGGGCACGCTaGTCAGCCATGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPRARAR*SAMACC
Trigger: GCAGCAGGCCATGGCTGAGCAGCGTGCCCGGGCCCG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGGTGGCACCGCCGGGTaGTGGGGCTGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSGGTAG*WGCCWA
Trigger: AGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCCACC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCGGTGGCACCGCCGGGTaGTGGGGCTGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAGGTAG*WGCCWA
Trigger: AGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCCACC...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCTGCCCCGCCTGCTCTaGAAGAGCCAGGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGLPRLL*KSQGRG
Trigger: CCCACGCCCCTGGCTCTTGCAGAGCAGGCGGGGCAG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGGGTCCCACTGGCAGTaGCAGCCACGCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPGSHWQ*QPRASS
Trigger: TGAAGATGCGCGTGGCTGGCACTGCCAGTGGGACCC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGGTGGGGGCTCCTCCTaGCCCCGAGACCCACTCAGC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALGGGSS*PRDPLS
Trigger: GCTGAGTGGGTCTCGGGGGCAGGAGGAGCCCCCACC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393605.7
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGTCTCGCAAACAGCCTaGCCCCTGGCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVVSQTA*PLAPGW
Trigger: CCACCCAGGGGCCAGGGGCCAGGCTGTTTGCGAGAC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCTGCCCGTGCAAGCCTaGGTCCCGCCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGLPVQA*VPPGLV
Trigger: GACCAGCCCAGGCGGGACCCAGGCTTGCACGGGCAG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCCTCGCTCAGCAGACTaGCCACGCGCACGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALPRSAD*PRARPV
Trigger: CACGGGCCGTGCGCGTGGCCAGTCTGCTGAGCGAGG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCCCCGTCCATGGGGTGTaGCGCAGCTATTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPPVHGV*RSYCAG
Trigger: CCCAGCACAATAGCTGCGCCACACCCCATGGACGGG...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCACAGGGCCTCAGCGATaGCTCCCTGCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPTGPQR*LPAWPP
Trigger: TGGAGGCCATGCAGGGAGCCATCGCTGAGGCCCTGT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCAGGCTCCGCACCTTaGAGACGCCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSGSAP*RRQRPG
Trigger: GCCTGGGCGCTGGCGTCTCCAAGGTGCGGAGCCTGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGCTGCAGGGCCTCACTaGGGGGCACGTTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVAAGPH*GARWLP
Trigger: GGGCAGCCAACGTGCCCCCCAGTGAGGCCCTGCAGC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGCTGCAGGGCCTCACTaGGGGGCACGTTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGAAGPH*GARWLP
Trigger: GGGCAGCCAACGTGCCCCCCAGTGAGGCCCTGCAGC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGGCACCGCCGGGTGCTaGGGCTGCTGCTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSGTAGC*GCCWAA
Trigger: TGCAGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGCGTGTCCCCCATGCTaGCGGCTGCTTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPACPPC*RLLSGW
Trigger: CCATCCAGAAAGCAGCCGCCAGCATGGGGGACACGC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCAGCCAGGTTAGGCGCTaGGCGCGAGTGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSQVRR*ARVKSP
Trigger: TGGGCTCTTCACTCGCGCCCAGCGCCTAACCTGGCT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTTCTTCACCACCAGGTaGCTGTCCGTGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPFFTTR*LSVPSP
Trigger: CGGGCTGGGCACGGACAGCCACCTGGTGGTGAAGAA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTCTCAGGCCGGTGACTaGTCTCAGGGGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPSQAGD*SQGPRS
Trigger: GGAGCGGGGCCCCTGAGACCAGTCACCGGCCTGAGA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCCCCAGCCTCTGCCATaGTTCCTGCCAGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPPQPLP*FLPAEA
Trigger: GGCCTCCGCTGGCAGGAACCATGGCAGAGGCTGGGG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGCGGGGCGGCACGGGTaGAACGCTCAGCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVAGRHG*NAQLCQ
Trigger: TTGGCAGAGCTGAGCGTTCCACCCGTGCCGCCCCGC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCTGCGGTAGGGCGTGGTaGGGTCGAAGCTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSACGRAW*GRSCAG
Trigger: ACCGGCGCAGCTTCGACCTCACCACGCCCTACCGCA...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTGCGGTAGGGCGTGGTaGGGTCGAAGCTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVCGRAW*GRSCAG
Trigger: ACCGGCGCAGCTTCGACCTCACCACGCCCTACCGCA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTGCGGTAGGGCGTGGTaGGGTCGAAGCTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGCGRAW*GRSCAG
Trigger: ACCGGCGCAGCTTCGACCTCACCACGCCCTACCGCA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGAGGCCCAGTCAGGCTaGGGAGCCCCGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVEAQSG*GAPQSA
Trigger: TGCTGACTGCGGGGCTCCTCAGCCTGACTGGGCCTC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGAGGCCCAGTCAGGCTaGGGAGCCCCGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGEAQSG*GAPQSA
Trigger: TGCTGACTGCGGGGCTCCTCAGCCTGACTGGGCCTC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCCCCAGCCAACCCATaGAGTCCAGCCGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPPANP*SPAAAR
Trigger: GCGAGCGGCGGCTGGACTTCATGGGTTGGCTGGGGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGGCGCTGGGCGCGAGTaGAGAGCCCATCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVGAGRE*RAHQAG
Trigger: ACCTGCCTGATGGGCTCTTCACTCGCGCCCAGCGCC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGGCGCTGGGCGCGAGTaGAGAGCCCATCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGGAGRE*RAHQAG
Trigger: ACCTGCCTGATGGGCTCTTCACTCGCGCCCAGCGCC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCTCACTGTGGCCCGGTTaGCAGGGGGCAGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSASLWPG*QGAAAP
Trigger: TGGTGCGGCTGCCCCCTGTCAACCGGGCCACAGTGA...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCACTGTGGCCCGGTTaGCAGGGGGCAGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSLWPG*QGAAAP
Trigger: TGGTGCGGCTGCCCCCTGTCAACCGGGCCACAGTGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCATCGTGGAAGCCACCTaGGGGCAGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAIVEAT*GQAQAQ
Trigger: CTGGGCCTGGGCCTGCCCTCAGGTGGCTTCCACGAT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCATCGTGGAAGCCACCTaGGGGCAGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGIVEAT*GQAQAQ
Trigger: CTGGGCCTGGGCCTGCCCTCAGGTGGCTTCCACGAT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCACAGAGGGTCCGCGGTaGAGGCAGCCACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGTEGPR*RQPHSG
Trigger: GCCGGAGTGTGGCTGCCTTCACCGCGGACCCTCTGT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGGTTCCTGCCCAGGCTaGCCCCTGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRGSCPG*PLLPPT
Trigger: GGTGGGAGGCAGCAGGGGTCAGCCTGGGCAGGAACC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGCCCCACAAGGACAGTaGACCCGGTGGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVAPQGQ*TRWGEQ
Trigger: CTGCTCACCCCACCGGGTTCACTGTCCTTGTGGGGC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCAGGCGGGTGTCGCTaGGGCCTTGGCACTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSGGCR*GLGTQW
Trigger: CCACTGAGTGCCAAGGCCTCAGCGACACCCGCCTGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCAGGATGCGGCGGCGGTaGCCAGGGAGTAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSARMRRR*PGSSMP
Trigger: GGGCATGCTACTCCCTGGTCACCGCCGCCGCATCCT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTGTGGATGGGGTGGTaGAGCAGGTGGGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPLWMGW*SRWAEG
Trigger: GCCTTCCGCCCACCTGCTTCACCACCCCATCCACAG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCGGGCCCGGGCACGCTaGTCAGCCATGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCRARAR*SAMACC
Trigger: GCAGCAGGCCATGGCTGAGCAGCGTGCCCGGGCCCG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGCGCCCAGGCCACGGTaGTCCCCTGCACAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRAPRPR*SPAQRL
Trigger: CAAGCGCTGTGCAGGGGAGCACCGTGGCCTGGGCGC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCGCCCAGGCCACGGTaGTCCCCTGCACAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSAPRPR*SPAQRL
Trigger: CAAGCGCTGTGCAGGGGAGCACCGTGGCCTGGGCGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGTGGCACCGCCGGGTaGTGGGGCTGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGGTAG*WGCCWA
Trigger: AGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCCACC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACTGCCCCGCCTGCTCTaGAAGAGCCAGGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPLPRLL*KSQGRG
Trigger: CCCACGCCCCTGGCTCTTGCAGAGCAGGCGGGGCAG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGACTGCCCCGCCTGCTCTaGAAGAGCCAGGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRLPRLL*KSQGRG
Trigger: CCCACGCCCCTGGCTCTTGCAGAGCAGGCGGGGCAG...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCTGCCCCGCCTGCTCTaGAAGAGCCAGGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPALPRLL*KSQGRG
Trigger: CCCACGCCCCTGGCTCTTGCAGAGCAGGCGGGGCAG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCTGCCCCGCCTGCTCTaGAAGAGCCAGGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSLPRLL*KSQGRG
Trigger: CCCACGCCCCTGGCTCTTGCAGAGCAGGCGGGGCAG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCAGGTGGCTGTCCGTaGCCAGCCCGTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPGGCP*PARAGW
Trigger: CCATCCTGCACGGGCTGGGCACGGACAGCCACCTGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCCAGGTGGCTGTCCGTaGCCAGCCCGTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVPGGCP*PARAGW
Trigger: CCATCCTGCACGGGCTGGGCACGGACAGCCACCTGG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCCAGAGCAGCTGGGCTaGCAAGGACGCCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALPEQLG*QGRPGP
Trigger: AGGACCCGGGCGTCCTTGGCAGCCCAGCTGCTCTGG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCTGGCCCCTGGCCCCTaGGTGGGTCTGAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSLAPGP*VGLRLR
Trigger: ACGCAGCCTCAGACCCACCCAGGGGCCAGGGGCCAG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCTGCCCGTGCAAGCCTaGGTCCCGCCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSLPVQA*VPPGLV
Trigger: GACCAGCCCAGGCGGGACCCAGGCTTGCACGGGCAG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCCTCGCTCAGCAGACTaGCCACGCGCACGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAPRSAD*PRARPV
Trigger: CACGGGCCGTGCGCGTGGCCAGTCTGCTGAGCGAGG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCTCGCTCAGCAGACTaGCCACGCGCACGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPRSAD*PRARPV
Trigger: CACGGGCCGTGCGCGTGGCCAGTCTGCTGAGCGAGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCAGGCGGCCCGTCCATaGGGTGTGGCGCAGCTATTG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVQAARP*GVAQLL
Trigger: CAATAGCTGCGCCACACCCCATGGACGGGCCGCCTG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCACTTCTGGTCCCCGATaGCAGCCACGTGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPTSGPR*QPRGRC
Trigger: GCATCTCCCACGTGGCTGCCATCGGGGACCAGAAGT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCTCAGGCTCCGCACCTTaGAGACGCCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSASGSAP*RRQRPG
Trigger: GCCTGGGCGCTGGCGTCTCCAAGGTGCGGAGCCTGA...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCAGGCTCCGCACCTTaGAGACGCCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSGSAP*RRQRPG
Trigger: GCCTGGGCGCTGGCGTCTCCAAGGTGCGGAGCCTGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCTGCAGGGCCTCACTaGGGGGCACGTTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSAAGPH*GARWLP
Trigger: GGGCAGCCAACGTGCCCCCCAGTGAGGCCCTGCAGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGCACCGCCGGGTGCTaGGGCTGCTGCTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGTAGC*GCCWAA
Trigger: TGCAGCCCAGCAGCAGCCCCAGCACCCGGCGGTGCC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTACTTGGCCTCCAGGTaGCACCGCCGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVYLASR*HRRVLG
Trigger: CCCCAGCACCCGGCGGTGCCACCTGGAGGCCAAGTA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTACTTGGCCTCCAGGTaGCACCGCCGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALYLASR*HRRVLG
Trigger: CCCCAGCACCCGGCGGTGCCACCTGGAGGCCAAGTA...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCTACTTGGCCTCCAGGTaGCACCGCCGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAYLASR*HRRVLG
Trigger: CCCCAGCACCCGGCGGTGCCACCTGGAGGCCAAGTA...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTACTTGGCCTCCAGGTaGCACCGCCGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGYLASR*HRRVLG
Trigger: CCCCAGCACCCGGCGGTGCCACCTGGAGGCCAAGTA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGAGAACCAGCCCTCCTaGGCCCGCTGTAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPENQPS*ARCRLR
Trigger: CCTGAGCCTACAGCGGGCCCAGGAGGGCTGGTTCTC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCTGGCGGCTGCTTTCTaGATGGCCCCCAGCCAACCC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVLAAAF*MAPSQP
Trigger: GGGTTGGCTGGGGGCCATCCAGAAAGCAGCCGCCAG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCATGCTGGGTCCCACTaGCAGTGCCAGCCACGCGCA +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVHAGSH*QCQPRA
Trigger: TGCGCGTGGCTGGCACTGCCAGTGGGACCCAGCATG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGGGGCCGGTGAGGTATaGGCACGGAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSGAGEV*ARSRPA
Trigger: GGCTGGCCTGCTCCGTGCCCATACCTCACCGGCCCC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGCGGCTCGGGTGGAGTaGCAGGCACAGGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALAARVE*QAQVVS
Trigger: GCTCACCACCTGTGCCTGCCACTCCACCCGAGCCGC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCTGGGTCTTGGGGCTaGGGACTCCCACAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSAGSWG*GLPQLR
Trigger: CCGGAGCTGTGGGAGTCCTCAGCCCCAAGACCCAGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATGCGGTAGGGCGTGGTaGGGTCGAAGCTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRCGRAW*GRSCAG
Trigger: ACCGGCGCAGCTTCGACCTCACCACGCCCTACCGCA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGAGGCCCAGTCAGGCTaGGGAGCCCCGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSEAQSG*GAPQSA
Trigger: TGCTGACTGCGGGGCTCCTCAGCCTGACTGGGCCTC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCCCCAGCCAACCCATaGAGTCCAGCCGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLPPANP*SPAAAR
Trigger: GCGAGCGGCGGCTGGACTTCATGGGTTGGCTGGGGG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCCCCAGCCAACCCATaGAGTCCAGCCGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPPANP*SPAAAR
Trigger: GCGAGCGGCGGCTGGACTTCATGGGTTGGCTGGGGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCCCCAGCCAACCCATaGAGTCCAGCCGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPPANP*SPAAAR
Trigger: GCGAGCGGCGGCTGGACTTCATGGGTTGGCTGGGGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGCTGCTCGCCCTCCTTaGGGTGCACAGAGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAAARPP*GAQSAH
Trigger: ATGCGCGCTCTGTGCACCTCAAGGAGGGCGAGCAGC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGCTGCTCGCCCTCCTTaGGGTGCACAGAGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGAARPP*GAQSAH
Trigger: ATGCGCGCTCTGTGCACCTCAAGGAGGGCGAGCAGC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGGCGCTGGGCGCGAGTaGAGAGCCCATCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSGAGRE*RAHQAG
Trigger: ACCTGCCTGATGGGCTCTTCACTCGCGCCCAGCGCC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAATCGTGGAAGCCACCTaGGGGCAGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPIVEAT*GQAQAQ
Trigger: CTGGGCCTGGGCCTGCCCTCAGGTGGCTTCCACGAT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCACAGAGGGTCCGCGGTaGAGGCAGCCACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSTEGPR*RQPHSG
Trigger: GCCGGAGTGTGGCTGCCTTCACCGCGGACCCTCTGT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGTTCCTGCCCAGGCTaGCCCCTGCTGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGSCPG*PLLPPT
Trigger: GGTGGGAGGCAGCAGGGGTCAGCCTGGGCAGGAACC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTTGCTCACAGCCTGCTaGGACCTGGGGCAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVLLTAC*DLGQAP
Trigger: AGGGGCTTGCCCCAGGTCTCAGCAGGCTGTGAGCAA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359373.9
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCCAGGCGGGCTGCGTATaGCCAAGAATGTCGTGTACC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPQAGCV*PRMSCT
Trigger: GGTACACGACATTCTTGGGCATACGCAGCCCGCCTG...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGCCTGCTGCAGGGCCTaGATCCACTCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALACCRA*IHSFRS
Trigger: GGAGCGGAAGGAGTGGATGCAGGCCCTGCAGCAGGC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCAGCCATGGCCTGCTaGAGGGCCTGCATCCACTCC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSAMAC*RACIHS
Trigger: GGAGTGGATGCAGGCCCTGCAGCAGGCCATGGCTGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTGCTCAGCCATGGCCTaGTGCAGGGCCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVCSAMA*CRACIH
Trigger: GTGGATGCAGGCCCTGCAGCAGGCCATGGCTGAGCA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCGGGCCCGGGCACGCTaGTCAGCCATGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWERARAR*SAMACC
Trigger: GCAGCAGGCCATGGCTGAGCAGCGTGCCCGGGCCCG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCCAGCGCGGTCAGGCTaGTCTGAGCCTGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVPARSG*SEPGTP
Trigger: GGGAGTTCCAGGCTCAGAGCAGCCTGACCGCGCTGG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCCAGCGCGGTCAGGCTaGTCTGAGCCTGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALPARSG*SEPGTP
Trigger: GGGAGTTCCAGGCTCAGAGCAGCCTGACCGCGCTGG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAAGCGTCTGCCCCGCCTaGTCTGCAAGAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRSVCPA*SARARG
Trigger: GCCCCTGGCTCTTGCAGAGCAGGCGGGGCAGACGCT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCAGCGTCTGCCCCGCCTaGTCTGCAAGAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSSVCPA*SARARG
Trigger: GCCCCTGGCTCTTGCAGAGCAGGCGGGGCAGACGCT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTGCAGTTTCCGTAGTTaGAGCGGCTCTTCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPCSFRS*SGSSQG
Trigger: GCCCTGCGAAGAGCCGCTGCAACTACGGAAACTGCA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCCCCATGCTGGCGGCTaGTTTCTGGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALPHAGG*FLDGPQ
Trigger: CTGGGGGCCATCCAGAAAGCAGCCGCCAGCATGGGG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCCCCATGCTGGCGGCTaGTTTCTGGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAPHAGG*FLDGPQ
Trigger: CTGGGGGCCATCCAGAAAGCAGCCGCCAGCATGGGG...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGAGTCCCCAAGCTGCTaGTCCGACAGCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGESPSC*SDSVSP
Trigger: GGGGGACACGCTGTCGGAGCAGCAGCTTGGGGACTC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGAGTCCCCAAGCTGCTaGTCCGACAGCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAESPSC*SDSVSP
Trigger: GGGGGACACGCTGTCGGAGCAGCAGCTTGGGGACTC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTCCGAGTCCCCAAGCTaGTGCTCCGACAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPSESPS*CSDSVS
Trigger: GGACACGCTGTCGGAGCAGCAGCTTGGGGACTCGGA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCACACTTGCGGTAGATaGCCTCGGAGGTCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVHTCGR*PRRSGR
Trigger: GCGGCCTGACCTCCGAGGGCATCTACCGCAAGTGTG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCATGTCTGCCCACACTTaGGGTAGATGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPMSAHT*GRCPRR
Trigger: CCTCCGAGGGCATCTACCGCAAGTGTGGGCAGACAT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCACAGAGCGCGCATCCTaGCGCAGGCTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGTERAS*RRLSSS
Trigger: GCTGCTGGAGAGCCTGCGGCAGGATGCGCGCTCTGT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCGCCCTCCTTGAGGTaGACAGAGCGCGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSPSLR*TERASC
Trigger: GCAGGATGCGCGCTCTGTGCACCTCAAGGAGGGCGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGGGTCCCACTGGCAGTaGCAGCCACGCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVGSHWQ*QPRASS
Trigger: TGAAGATGCGCGTGGCTGGCACTGCCAGTGGGACCC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGACCTTCTCCGCAAAGTaGAGGGGGCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVTFSAK*RGRSAS
Trigger: GGAGGCAGAGCGCCCCCTGCACTTTGCGGAGAAGGT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCAGGTGGCTGTCCGTaGCCAGCCCGTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPGGCP*PARAGW
Trigger: CCATCCTGCACGGGCTGGGCACGGACAGCCACCTGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCATCCCCAGCCTCTaGCATGGTTCCTGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSIPSL*HGSCQR
Trigger: CCGCTGGCAGGAACCATGGCAGAGGCTGGGGATGCT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCTGGCCCCTGGCCCCTaGGTGGGTCTGAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCLAPGP*VGLRLR
Trigger: ACGCAGCCTCAGACCCACCCAGGGGCCAGGGGCCAG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGTCTCGCAAACAGCCTaGCCCCTGGCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSVSQTA*PLAPGW
Trigger: CCACCCAGGGGCCAGGGGCCAGGCTGTTTGCGAGAC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGGGTCCCGCCTGGGCTaGTCTCGCAAACAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSGSRLG*SRKQPG
Trigger: GCCAGGCTGTTTGCGAGACCAGCCCAGGCGGGACCC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCAGCCTGGGTCCCGCCTaGGCTGGTCTCGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSLGPA*AGLANS
Trigger: GCTGTTTGCGAGACCAGCCCAGGCGGGACCCAGGCT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGGTCATCACTCTGGCTaGGGCCCCCGGCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAGHHSG*GPRPLL
Trigger: GAGGAGGGGCCGGGGGCCCCAGCCAGAGTGATGACC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGTCATCACTCTGGCTaGGGCCCCCGGCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGHHSG*GPRPLL
Trigger: GAGGAGGGGCCGGGGGCCCCAGCCAGAGTGATGACC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCTCGCTCAGCAGACTaGCCACGCGCACGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLPRSAD*PRARPV
Trigger: CACGGGCCGTGCGCGTGGCCAGTCTGCTGAGCGAGG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCTCGCTCAGCAGACTaGCCACGCGCACGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPRSAD*PRARPV
Trigger: CACGGGCCGTGCGCGTGGCCAGTCTGCTGAGCGAGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCAGGCGGCCCGTCCATaGGGTGTGGCGCAGCTATTG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVQAARP*GVAQLL
Trigger: CAATAGCTGCGCCACACCCCATGGACGGGCCGCCTG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCATCAGGCTCCGCACCTTaGAGACGCCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPSGSAP*RRQRPG
Trigger: GCCTGGGCGCTGGCGTCTCCAAGGTGCGGAGCCTGA...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGCTGCAGGGCCTCACTaGGGGGCACGTTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLAAGPH*GARWLP
Trigger: GGGCAGCCAACGTGCCCCCCAGTGAGGCCCTGCAGC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGCTGCAGGGCCTCACTaGGGGGCACGTTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCAAGPH*GARWLP
Trigger: GGGCAGCCAACGTGCCCCCCAGTGAGGCCCTGCAGC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTGCCCTCACGGTACTTaGCCTCCAGGTGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGCPHGT*PPGGTA
Trigger: GGCGGTGCCACCTGGAGGCCAAGTACCGTGAGGGCA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTTGTCCAGCTCCTCCTaGTTGCCAAAGAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPLSSSS*LPKSGW
Trigger: CCACCCGCTCTTTGGCAACCAGGAGGAGCTGGACAA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCAGCCCAGGAGCGCCTaGGTCTCAGCCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVQPRSA*VSARSV
Trigger: CACAGACCTGGCTGAGACCCAGGCGCTCCTGGGCTG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCAGCCCAGGAGCGCCTaGGTCTCAGCCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAQPRSA*VSARSV
Trigger: CACAGACCTGGCTGAGACCCAGGCGCTCCTGGGCTG...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCAGCCCAGGAGCGCCTaGGTCTCAGCCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGQPRSA*VSARSV
Trigger: CACAGACCTGGCTGAGACCCAGGCGCTCCTGGGCTG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGAGAACCAGCCCTCCTaGGCCCGCTGTAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALENQPS*ARCRLR
Trigger: CCTGAGCCTACAGCGGGCCCAGGAGGGCTGGTTCTC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGAGAACCAGCCCTCCTaGGCCCGCTGTAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGENQPS*ARCRLR
Trigger: CCTGAGCCTACAGCGGGCCCAGGAGGGCTGGTTCTC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCTGGCGGCTGCTTTCTaGATGGCCCCCAGCCAACCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGLAAAF*MAPSQP
Trigger: GGGTTGGCTGGGGGCCATCCAGAAAGCAGCCGCCAG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTCCTGCCCATCTGTCTaGAAGAGCGTGGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSCPSV*KSVGPN
Trigger: GTTTGGGCCCACGCTCTTCCAGACAGATGGGCAGGA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCATGCTGGGTCCCACTaGCAGTGCCAGCCACGCGCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGHAGSH*QCQPRA
Trigger: TGCGCGTGGCTGGCACTGCCAGTGGGACCCAGCATG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCCAGCCCGTGCAGGATaGGCAGCACCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVPARAG*AAPSPQ
Trigger: TTGCGGAGAAGGTGCTGCCCATCCTGCACGGGCTGG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCCAGCCCGTGCAGGATaGGCAGCACCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPPARAG*AAPSPQ
Trigger: TTGCGGAGAAGGTGCTGCCCATCCTGCACGGGCTGG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGCAGCATGGCCTCCATaGCCTGGTGCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPAAWPP*PGASSP
Trigger: TGGTGAAGAAGCACCAGGCCATGGAGGCCATGCTGC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGCCCCAGCAGGTGGGTaGCCTGAGTTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPAPAGG*PEFLLH
Trigger: GTGAAGAAGAAACTCAGGCCACCCACCTGCTGGGGC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCAGCGGAGGCCTGACTaGCAGGGCTTTGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPQRRPD*QGFVQS
Trigger: GCTCTGGACAAAGCCCTGCCAGTCAGGCCTCCGCTG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGGGGCCGGTGAGGTATaGGCACGGAGCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAGAGEV*ARSRPA
Trigger: GGCTGGCCTGCTCCGTGCCCATACCTCACCGGCCCC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCGGCTCGGGTGGAGTaGCAGGCACAGGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSAARVE*QAQVVS
Trigger: GCTCACCACCTGTGCCTGCCACTCCACCCGAGCCGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGCGGGGCGGCACGGGTaGAACGCTCAGCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRAGRHG*NAQLCQ
Trigger: TTGGCAGAGCTGAGCGTTCCACCCGTGCCGCCCCGC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGCGGTCAGGCTGCTCTaGGCCTGGAACTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPAVRLL*AWNSQQ
Trigger: CTGCTGGGAGTTCCAGGCTCAGAGCAGCCTGACCGC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCGGTCAGGCTGCTCTaGGCCTGGAACTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSAVRLL*AWNSQQ
Trigger: CTGCTGGGAGTTCCAGGCTCAGAGCAGCCTGACCGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGAGGCCCAGTCAGGCTaGGGAGCCCCGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAEAQSG*GAPQSA
Trigger: TGCTGACTGCGGGGCTCCTCAGCCTGACTGGGCCTC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCCCCGAGAAGCAGTTaGTCCCAGCCCCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPPRSS*SQPHSP
Trigger: TGGGCTGTGGGGCTGGGATCAACTGCTTCTCGGGGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCAGGCCGCACTGCGTaGTGTAGTCCACACAGCGGT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSGRTA*CSPHSG
Trigger: ACCGCTGTGTGGACTACATCACGCAGTGCGGCCTGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGCTGCTCGCCCTCCTTaGGGTGCACAGAGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRAARPP*GAQSAH
Trigger: ATGCGCGCTCTGTGCACCTCAAGGAGGGCGAGCAGC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCTGCTCGCCCTCCTTaGGGTGCACAGAGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSAARPP*GAQSAH
Trigger: ATGCGCGCTCTGTGCACCTCAAGGAGGGCGAGCAGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGCGCTGGGCGCGAGTaGAGAGCCCATCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGAGRE*RAHQAG
Trigger: ACCTGCCTGATGGGCTCTTCACTCGCGCCCAGCGCC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTTCACTGTGGCCCGGTTaGCAGGGGGCAGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLSLWPG*QGAAAP
Trigger: TGGTGCGGCTGCCCCCTGTCAACCGGGCCACAGTGA...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCCAGGATCTCCAGGGTaGGCTCCTCAGCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPPGSPG*APQQSW
Trigger: CCATGACTGCTGAGGAGCTCACCCTGGAGATCCTGG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCCAGGATCTCCAGGGTaGGCTCCTCAGCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVPGSPG*APQQSW
Trigger: CCATGACTGCTGAGGAGCTCACCCTGGAGATCCTGG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTATCGTGGAAGCCACCTaGGGGCAGGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCIVEAT*GQAQAQ
Trigger: CTGGGCCTGGGCCTGCCCTCAGGTGGCTTCCACGAT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCTCATGCACCACTGTaGAGCCCCAGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSHAPL*SPSRWV
Trigger: CACCCACCTGCTGGGGCTTCACAGTGGTGCATGAGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCGAAGGGGGATCAGTaGCACACTACCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSKGDQ*HTTQPD
Trigger: GTCCGGCTGGGTAGTGTGTCACTGATCCCCCTTCGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTCGAAGGGGGATCAGTaGCACACTACCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPSKGDQ*HTTQPD
Trigger: GTCCGGCTGGGTAGTGTGTCACTGATCCCCCTTCGA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTACAGAGGGTCCGCGGTaGAGGCAGCCACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCTEGPR*RQPHSG
Trigger: GCCGGAGTGTGGCTGCCTTCACCGCGGACCCTCTGT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGCCCCACAAGGACAGTaGACCCGGTGGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPAPQGQ*TRWGEQ
Trigger: CTGCTCACCCCACCGGGTTCACTGTCCTTGTGGGGC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCAGGGCCTCACGCCTCTaGAAGGGTGGTGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSRASRL*KGGGPP
Trigger: GGGAGGACCACCACCCTTTCAGAGGCGTGAGGCCCT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGAGAGCTCCCTCCCCGTaGGCTGAGTGCTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVRAPSP*AECSST
Trigger: TGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCTGCCAGCGGAGGCCTaGCTGGCAGGGCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPALPAEA*LAGLCP
Trigger: TGGACAAAGCCCTGCCAGTCAGGCCTCCGCTGGCAG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGGCAGGCACAGGTGGTaGGCGGAAGATGTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALGRHRW*AEDVAL
Trigger: AAGCGCCACATCTTCCGCTCACCACCTGTGCCTGCC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCTGTGGATGGGGTGGTaGAGCAGGTGGGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSLWMGW*SRWAEG
Trigger: GCCTTCCGCCCACCTGCTTCACCACCCCATCCACAG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCAGGCCTCAGACGCCTaGTGGGTCTTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSQASDA*WVLGLR
Trigger: CCTCAGCCCCAAGACCCAGCAGGCGTCTGAGGCCTG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCTCAGGCTGCTGGTATaGCATCCGCCATTGGGGACG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVLRLLV*HPPLGT
Trigger: CGTCCCCAATGGCGGATGGCATACCAGCAGCCTGAG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGCCTGCTGCAGGGCCTaGATCCACTCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRACCRA*IHSFRS
Trigger: GGAGCGGAAGGAGTGGATGCAGGCCCTGCAGCAGGC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCAGCCATGGCCTGCTaGAGGGCCTGCATCCACTCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSAMAC*RACIHS
Trigger: GGAGTGGATGCAGGCCCTGCAGCAGGCCATGGCTGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTGCTCAGCCATGGCCTaGTGCAGGGCCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALCSAMA*CRACIH
Trigger: GTGGATGCAGGCCCTGCAGCAGGCCATGGCTGAGCA...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTGCTCAGCCATGGCCTaGTGCAGGGCCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVCSAMA*CRACIH
Trigger: GTGGATGCAGGCCCTGCAGCAGGCCATGGCTGAGCA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCAGCGCGGTCAGGCTaGTCTGAGCCTGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPARSG*SEPGTP
Trigger: GGGAGTTCCAGGCTCAGAGCAGCCTGACCGCGCTGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTCAGCGATGGCTCCCTaGATGGCCTCCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVSAMAP*MASNHC
Trigger: GCAGTGGTTGGAGGCCATGCAGGGAGCCATCGCTGA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGAACCTGTTGGGGGCTaGAGCCCAGATGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPEPVGG*SPDALG
Trigger: GCCGAGCGCATCTGGGCTGCAGCCCCCAACAGGTTC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGAACCTGTTGGGGGCTaGAGCCCAGATGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCREPVGG*SPDALG
Trigger: GCCGAGCGCATCTGGGCTGCAGCCCCCAACAGGTTC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGAACCTGTTGGGGGCTaGAGCCCAGATGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSEPVGG*SPDALG
Trigger: GCCGAGCGCATCTGGGCTGCAGCCCCCAACAGGTTC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGGTAGCGGCGGTACTTaGCCTCACGGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVGSGGT*PHGTWP
Trigger: AGGCCAAGTACCGTGAGGGCAAGTACCGCCGCTACC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTAGCGTCTGCCCCGCCTaGTCTGCAAGAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLSVCPA*SARARG
Trigger: GCCCCTGGCTCTTGCAGAGCAGGCGGGGCAGACGCT...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTAGCGTCTGCCCCGCCTaGTCTGCAAGAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSVCPA*SARARG
Trigger: GCCCCTGGCTCTTGCAGAGCAGGCGGGGCAGACGCT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGTCAGGAGGGGGCACTaGCAGGCACACAATCTCGCT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVVRRGH*QAHNLA
Trigger: AGCGAGATTGTGTGCCTGGCAGTGCCCCCTCCTGAC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCCCATGCTGGCGGCTaGTTTCTGGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPHAGG*FLDGPQ
Trigger: CTGGGGGCCATCCAGAAAGCAGCCGCCAGCATGGGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGAGTCCCCAAGCTGCTaGTCCGACAGCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRESPSC*SDSVSP
Trigger: GGGGGACACGCTGTCGGAGCAGCAGCTTGGGGACTC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGAGTCCCCAAGCTGCTaGTCCGACAGCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPESPSC*SDSVSP
Trigger: GGGGGACACGCTGTCGGAGCAGCAGCTTGGGGACTC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGAGTCCCCAAGCTGCTaGTCCGACAGCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSESPSC*SDSVSP
Trigger: GGGGGACACGCTGTCGGAGCAGCAGCTTGGGGACTC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGAGTCCCCAAGCTaGTGCTCCGACAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSESPS*CSDSVS
Trigger: GGACACGCTGTCGGAGCAGCAGCTTGGGGACTCGGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCACACTTGCGGTAGATaGCCTCGGAGGTCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALHTCGR*PRRSGR
Trigger: GCGGCCTGACCTCCGAGGGCATCTACCGCAAGTGTG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAACAGAGCGCGCATCCTaGCGCAGGCTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPTERAS*RRLSSS
Trigger: GCTGCTGGAGAGCCTGCGGCAGGATGCGCGCTCTGT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCACAGAGCGCGCATCCTaGCGCAGGCTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPATERAS*RRLSSS
Trigger: GCTGCTGGAGAGCCTGCGGCAGGATGCGCGCTCTGT...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCGCCCTCCTTGAGGTaGACAGAGCGCGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSPSLR*TERASC
Trigger: GCAGGATGCGCGCTCTGTGCACCTCAAGGAGGGCGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGGGTCCCACTGGCAGTaGCAGCCACGCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGGSHWQ*QPRASS
Trigger: TGAAGATGCGCGTGGCTGGCACTGCCAGTGGGACCC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCACCTTCTCCGCAAAGTaGAGGGGGCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGTFSAK*RGRSAS
Trigger: GGAGGCAGAGCGCCCCCTGCACTTTGCGGAGAAGGT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCAGGTGGCTGTCCGTaGCCAGCCCGTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPGGCP*PARAGW
Trigger: CCATCCTGCACGGGCTGGGCACGGACAGCCACCTGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCAGGTGGCTGTCCGTaGCCAGCCCGTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPGGCP*PARAGW
Trigger: CCATCCTGCACGGGCTGGGCACGGACAGCCACCTGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCCAGGCCCAGGAGGCTaGGGTCCTCACGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALPGPGG*GPHGTS
Trigger: TGAAGTTCCGTGAGGACCGCAGCCTCCTGGGCCTGG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCAGGCCCAGGAGGCTaGGGTCCTCACGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPGPGG*GPHGTS
Trigger: TGAAGTTCCGTGAGGACCGCAGCCTCCTGGGCCTGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTGCCGGGGAACCCCATaGTGCAGTCAGGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPCRGTP*CSQDGG
Trigger: TCCTCCATCCTGACTGCAGCATGGGGTTCCCCGGCA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGAGCAGCTGGGCTaGCAAGGACGCCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLPEQLG*QGRPGP
Trigger: AGGACCCGGGCGTCCTTGGCAGCCCAGCTGCTCTGG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAGCATCCCCAGCCTCTaGCATGGTTCCTGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVSIPSL*HGSCQR
Trigger: CCGCTGGCAGGAACCATGGCAGAGGCTGGGGATGCT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCTGCTCCAGGTGCAATaGCCGCAGCCACTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPALLQVQ*PQPLGH
Trigger: GTGGCCGAGTGGCTGCGGGCATTGCACCTGGAGCAG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCTGCTCCAGGTGCAATaGCCGCAGCCACTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSLLQVQ*PQPLGH
Trigger: GTGGCCGAGTGGCTGCGGGCATTGCACCTGGAGCAG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGCCCACACCAGGCCATaGTGCTCAAAGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALAHTRP*CSKSPV
Trigger: CACGGGGCTCTTTGAGCAGCATGGCCTGGTGTGGGC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGACCAGGGAGTAGCATaGCCATGTCCATCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVDQGVA*PCPSGG
Trigger: CCCGCCTGATGGACATGGGCATGCTACTCCCTGGTC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGCAGGCCAGCCAGGATaGGGCGGCGGTGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEAGQPG*GGGDQG
Trigger: TCCCTGGTCACCGCCGCCGCATCCTGGCTGGCCTGC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGTCTCGCAAACAGCCTaGCCCCTGGCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCVSQTA*PLAPGW
Trigger: CCACCCAGGGGCCAGGGGCCAGGCTGTTTGCGAGAC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGGTCCCGCCTGGGCTaGTCTCGCAAACAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGSRLG*SRKQPG
Trigger: GCCAGGCTGTTTGCGAGACCAGCCCAGGCGGGACCC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCAGCCTGGGTCCCGCCTaGGCTGGTCTCGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPASLGPA*AGLANS
Trigger: GCTGTTTGCGAGACCAGCCCAGGCGGGACCCAGGCT...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCCCGGCCCCTCCTCTaGGACCTCATCGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPRPLL*DLIVVR
Trigger: TCTGACTACGATGAGGTCCCAGAGGAGGGGCCGGGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCTGGGACTCGGCTCGGTaGGGGCTCCTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAWDSAR*GLLLLG
Trigger: ACCAAGAAGGAGGAGCCCCCACCGAGCCGAGTCCCA...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTGGGACTCGGCTCGGTaGGGGCTCCTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGWDSAR*GLLLLG
Trigger: ACCAAGAAGGAGGAGCCCCCACCGAGCCGAGTCCCA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCCGTCCATGGGGTGTaGCGCAGCTATTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPVHGV*RSYCAG
Trigger: CCCAGCACAATAGCTGCGCCACACCCCATGGACGGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGACAGGCGGCCCGTCCATaGGGTGTGGCGCAGCTATTG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRQAARP*GVAQLL
Trigger: CAATAGCTGCGCCACACCCCATGGACGGGCCGCCTG...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGGCGGCCCGTCCATaGGGTGTGGCGCAGCTATTG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAQAARP*GVAQLL
Trigger: CAATAGCTGCGCCACACCCCATGGACGGGCCGCCTG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCGATGGCAGCCACGTaGGAGATGCAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPMAAT*EMQATE
Trigger: CTCTGTGGCCTGCATCTCCCACGTGGCTGCCATCGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGACTTCTGGTCCCCGATaGCAGCCACGTGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVTSGPR*QPRGRC
Trigger: GCATCTCCCACGTGGCTGCCATCGGGGACCAGAAGT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCGATGGCTCCCTGCATaGCCTCCAACCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVRWLPA*PPTTAP
Trigger: AGGAGCAGTGGTTGGAGGCCATGCAGGGAGCCATCG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTTCAGGCTCCGCACCTTaGAGACGCCAGCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLSGSAP*RRQRPG
Trigger: GCCTGGGCGCTGGCGTCTCCAAGGTGCGGAGCCTGA...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCATGCCCTCACGGTACTTaGCCTCCAGGTGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPCPHGT*PPGGTA
Trigger: GGCGGTGCCACCTGGAGGCCAAGTACCGTGAGGGCA...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGGCACACAATCTCGCTaGCCCGAATCTCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPGTQSR*PESLHW
Trigger: CCAATGGAGAGATTCGGGCCAGCGAGATTGTGTGCC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGAGAACCAGCCCTCCTaGGCCCGCTGTAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSENQPS*ARCRLR
Trigger: CCTGAGCCTACAGCGGGCCCAGGAGGGCTGGTTCTC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAGCCAGGTTAGGCGCTaGGCGCGAGTGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVSQVRR*ARVKSP
Trigger: TGGGCTCTTCACTCGCGCCCAGCGCCTAACCTGGCT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGACATGCTGGGTCCCACTaGCAGTGCCAGCCACGCGCA +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRHAGSH*QCQPRA
Trigger: TGCGCGTGGCTGGCACTGCCAGTGGGACCCAGCATG...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCAGCCCGTGCAGGATaGGCAGCACCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPARAG*AAPSPQ
Trigger: TTGCGGAGAAGGTGCTGCCCATCCTGCACGGGCTGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTTCTTCACCACCAGGTaGCTGTCCGTGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVFFTTR*LSVPSP
Trigger: CGGGCTGGGCACGGACAGCCACCTGGTGGTGAAGAA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTTCTTCACCACCAGGTaGCTGTCCGTGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGFFTTR*LSVPSP
Trigger: CGGGCTGGGCACGGACAGCCACCTGGTGGTGAAGAA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCCAGGTACAGCAGCATaGCCTCCATGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVPGTAA*PPWPGA
Trigger: AGCACCAGGCCATGGAGGCCATGCTGCTGTACCTGG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTCTCAGGCCGGTGACTaGTCTCAGGGGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSQAGD*SQGPRS
Trigger: GGAGCGGGGCCCCTGAGACCAGTCACCGGCCTGAGA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCGCCCCTGTCCCTCTTTaGGCCCTCAGGTTTGCAATT +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPAPVPL*ALRFAI
Trigger: AATTGCAAACCTGAGGGCCCAAAGAGGGACAGGGGC...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359373.9
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACAGCCTGCTGAGACCTaGGGCAAGCCCCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPQPAET*GKPLSL
Trigger: GAGGGACAGGGGCTTGCCCCAGGTCTCAGCAGGCTG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359373.9
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCAGCGGAGGCCTGACTaGCAGGGCTTTGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAQRRPD*QGFVQS
Trigger: GCTCTGGACAAAGCCCTGCCAGTCAGGCCTCCGCTG...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCCCAGCCTCTGCCATaGTTCCTGCCAGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPQPLP*FLPAEA
Trigger: GGCCTCCGCTGGCAGGAACCATGGCAGAGGCTGGGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGGCCTTGGCACTCAGTaGCCCACACCAGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAGLGTQ*PTPGHA
Trigger: AGCATGGCCTGGTGTGGGCCACTGAGTGCCAAGGCC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGACATACAGCCAGGGCCTaGGGGAGCCACACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRHTARA*GSHTRA
Trigger: GGCTCTGGTGTGGCTCCCCCAGGCCCTGGCTGTATG...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393605.7
3UTR CAA 72 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTaGGGAGAGGTTCCTGCCCAGGCTGACCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTE*GEVPAQADPCC
Trigger: GCAGCAGGGGTCAGCCTGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
3UTR CAA 72 bp CTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTaGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLYSTRFLLFWS*LGGAGGSLPAG
Trigger: CCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGCGGTCAGGCTGCTCTaGGCCTGGAACTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCAVRLL*AWNSQQ
Trigger: CTGCTGGGAGTTCCAGGCTCAGAGCAGCCTGACCGC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGCGGTCAGGCTGCTCTaGGCCTGGAACTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLAVRLL*AWNSQQ
Trigger: CTGCTGGGAGTTCCAGGCTCAGAGCAGCCTGACCGC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGAGGCCCAGTCAGGCTaGGGAGCCCCGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEEAQSG*GAPQSA
Trigger: TGCTGACTGCGGGGCTCCTCAGCCTGACTGGGCCTC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCCCCGAGAAGCAGTTaGTCCCAGCCCCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPPRSS*SQPHSP
Trigger: TGGGCTGTGGGGCTGGGATCAACTGCTTCTCGGGGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCACTTGACCCACTCATaGGCCTGCTCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVHLTHS*ACSALS
Trigger: GGAGAGTGCGGAGCAGGCTCATGAGTGGGTCAAGTG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCACTTGACCCACTCATaGGCCTGCTCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAHLTHS*ACSALS
Trigger: GGAGAGTGCGGAGCAGGCTCATGAGTGGGTCAAGTG...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCACTTGACCCACTCATaGGCCTGCTCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGHLTHS*ACSALS
Trigger: GGAGAGTGCGGAGCAGGCTCATGAGTGGGTCAAGTG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTCAGGCCGCACTGCGTaGTGTAGTCCACACAGCGGT +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVSGRTA*CSPHSG
Trigger: ACCGCTGTGTGGACTACATCACGCAGTGCGGCCTGA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCAGGCCGCACTGCGTaGTGTAGTCCACACAGCGGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSGRTA*CSPHSG
Trigger: ACCGCTGTGTGGACTACATCACGCAGTGCGGCCTGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGCTGCTCGCCCTCCTTaGGGTGCACAGAGCGCGCAT +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLAARPP*GAQSAH
Trigger: ATGCGCGCTCTGTGCACCTCAAGGAGGGCGAGCAGC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCGCGCAGGAAGCGCTTaGGCGCCGAGGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGRAGSA*APRKHH
Trigger: ATGATGTTTCCTCGGCGCTCAAGCGCTTCCTGCGCG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCGCGCAGGAAGCGCTTaGGCGCCGAGGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVRAGSA*APRKHH
Trigger: ATGATGTTTCCTCGGCGCTCAAGCGCTTCCTGCGCG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTCACTGTGGCCCGGTTaGCAGGGGGCAGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWESLWPG*QGAAAP
Trigger: TGGTGCGGCTGCCCCCTGTCAACCGGGCCACAGTGA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCTCATGCACCACTGTaGAGCCCCAGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSHAPL*SPSRWV
Trigger: CACCCACCTGCTGGGGCTTCACAGTGGTGCATGAGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGACAGAGGGTCCGCGGTaGAGGCAGCCACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWETEGPR*RQPHSG
Trigger: GCCGGAGTGTGGCTGCCTTCACCGCGGACCCTCTGT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGTGAACCCGGTGGGGTaGGCAGGTTGGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCVNPVG*AGWAKR
Trigger: CCTCTTGGCCCAACCTGCTCACCCCACCGGGTTCAC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGTGAACCCGGTGGGGTaGGCAGGTTGGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLVNPVG*AGWAKR
Trigger: CCTCTTGGCCCAACCTGCTCACCCCACCGGGTTCAC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGTGAACCCGGTGGGGTaGGCAGGTTGGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAVNPVG*AGWAKR
Trigger: CCTCTTGGCCCAACCTGCTCACCCCACCGGGTTCAC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGCCCCACAAGGACAGTaGACCCGGTGGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLAPQGQ*TRWGEQ
Trigger: CTGCTCACCCCACCGGGTTCACTGTCCTTGTGGGGC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAGAGCTCCCTCCCCGTaGGCTGAGTGCTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVRAPSP*AECSST
Trigger: TGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGACTGGAAGGAAGGCTaGAGTCCCCAAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPDWKEG*SPQSAA
Trigger: AGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCTGCCAGCGGAGGCCTaGCTGGCAGGGCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLLPAEA*LAGLCP
Trigger: TGGACAAAGCCCTGCCAGTCAGGCCTCCGCTGGCAG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGTCAGGCGGGTGTCGCTaGGGCCTTGGCACTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPASGGCR*GLGTQW
Trigger: CCACTGAGTGCCAAGGCCTCAGCGACACCCGCCTGA...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCGGCAGGCACAGGTGGTaGGCGGAAGATGTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAGRHRW*AEDVAL
Trigger: AAGCGCCACATCTTCCGCTCACCACCTGTGCCTGCC...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCACACCAGCGCCGGCTaGACTCTCCTTTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVHTSAG*TLLFQK
Trigger: CTTCTGGAAAAGGAGAGTTCAGCCGGCGCTGGTGTG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455638.6
CDS-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTCAGGCTGCTGGTATaGCATCCGCCATTGGGGACG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSALRLLV*HPPLGT
Trigger: CGTCCCCAATGGCGGATGGCATACCAGCAGCCTGAG...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCTCAGGCTGCTGGTATaGCATCCGCCATTGGGGACG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGLRLLV*HPPLGT
Trigger: CGTCCCCAATGGCGGATGGCATACCAGCAGCCTGAG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGCCTGCTGCAGGGCCTaGATCCACTCCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCACCRA*IHSFRS
Trigger: GGAGCGGAAGGAGTGGATGCAGGCCCTGCAGCAGGC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCTCAGCCATGGCCTGCTaGAGGGCCTGCATCCACTCC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPASAMAC*RACIHS
Trigger: GGAGTGGATGCAGGCCCTGCAGCAGGCCATGGCTGA...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTCAGCCATGGCCTGCTaGAGGGCCTGCATCCACTCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSSAMAC*RACIHS
Trigger: GGAGTGGATGCAGGCCCTGCAGCAGGCCATGGCTGA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCTGCTCAGCCATGGCCTaGTGCAGGGCCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPACSAMA*CRACIH
Trigger: GTGGATGCAGGCCCTGCAGCAGGCCATGGCTGAGCA...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCAGCGCGGTCAGGCTaGTCTGAGCCTGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPARSG*SEPGTP
Trigger: GGGAGTTCCAGGCTCAGAGCAGCCTGACCGCGCTGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCAGCGCGGTCAGGCTaGTCTGAGCCTGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPARSG*SEPGTP
Trigger: GGGAGTTCCAGGCTCAGAGCAGCCTGACCGCGCTGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCAGCGATGGCTCCCTaGATGGCCTCCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSAMAP*MASNHC
Trigger: GCAGTGGTTGGAGGCCATGCAGGGAGCCATCGCTGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGAACCTGTTGGGGGCTaGAGCCCAGATGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAEPVGG*SPDALG
Trigger: GCCGAGCGCATCTGGGCTGCAGCCCCCAACAGGTTC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGAACCTGTTGGGGGCTaGAGCCCAGATGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCEPVGG*SPDALG
Trigger: GCCGAGCGCATCTGGGCTGCAGCCCCCAACAGGTTC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGCCACGGTGCTCCCCTaGACAGCGCTTGCAGATAAC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGATVLP*TALADN
Trigger: GTTATCTGCAAGCGCTGTGCAGGGGAGCACCGTGGC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCCAGCTCCTCCTGGTTaGCAAAGAGCGGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALPAPPG*QRAGGS
Trigger: GCTACCACCCGCTCTTTGGCAACCAGGAGGAGCTGG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGTCTGTGGTGGTGACTaGAGCACACAGGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVVCGGD*STQGLV
Trigger: GACAAGGCCCTGTGTGCTGCAGTCACCACCACAGAC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTCCATCTGCAGCGTCTaGCCCGCCTGCTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVSICSV*PACSAR
Trigger: TCTTGCAGAGCAGGCGGGGCAGACGCTGCAGATGGA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCGAAGGAATTCCATCTaGAGCGTCTGCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVRRNSI*SVCPAC
Trigger: GCAGGCGGGGCAGACGCTGCAGATGGAATTCCTTCG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGCGAAGGAATTCCATCTaGAGCGTCTGCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALRRNSI*SVCPAC
Trigger: GCAGGCGGGGCAGACGCTGCAGATGGAATTCCTTCG...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCGAAGGAATTCCATCTaGAGCGTCTGCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGRRNSI*SVCPAC
Trigger: GCAGGCGGGGCAGACGCTGCAGATGGAATTCCTTCG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGGTCCTGTAGCAGCTTaGCGGCAGAGGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPGPVAA*RQRQSC
Trigger: ACAAGACTGCCTCTGCCGGCAAGCTGCTACAGGACC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGTCAGGAGGGGGCACTaGCAGGCACACAATCTCGCT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAVRRGH*QAHNLA
Trigger: AGCGAGATTGTGTGCCTGGCAGTGCCCCCTCCTGAC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGTCAGGAGGGGGCACTaGCAGGCACACAATCTCGCT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGVRRGH*QAHNLA
Trigger: AGCGAGATTGTGTGCCTGGCAGTGCCCCCTCCTGAC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTGCAGTTTCCGTAGTTaGAGCGGCTCTTCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVCSFRS*SGSSQG
Trigger: GCCCTGCGAAGAGCCGCTGCAACTACGGAAACTGCA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCCCATGCTGGCGGCTaGTTTCTGGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPHAGG*FLDGPQ
Trigger: CTGGGGGCCATCCAGAAAGCAGCCGCCAGCATGGGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCCCATGCTGGCGGCTaGTTTCTGGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPHAGG*FLDGPQ
Trigger: CTGGGGGCCATCCAGAAAGCAGCCGCCAGCATGGGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCACAGCGTGTCCCCCATaGTGGCGGCTGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSATACPP*WRLLSG
Trigger: TCCAGAAAGCAGCCGCCAGCATGGGGGACACGCTGT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCACAGCGTGTCCCCCATaGTGGCGGCTGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGTACPP*WRLLSG
Trigger: TCCAGAAAGCAGCCGCCAGCATGGGGGACACGCTGT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCATCCGAGTCCCCAAGCTaGTGCTCCGACAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPSESPS*CSDSVS
Trigger: GGACACGCTGTCGGAGCAGCAGCTTGGGGACTCGGA...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCACACTTGCGGTAGATaGCCTCGGAGGTCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSHTCGR*PRRSGR
Trigger: GCGGCCTGACCTCCGAGGGCATCTACCGCAAGTGTG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTACAGAGCGCGCATCCTaGCGCAGGCTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLTERAS*RRLSSS
Trigger: GCTGCTGGAGAGCCTGCGGCAGGATGCGCGCTCTGT...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTACAGAGCGCGCATCCTaGCGCAGGCTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCTERAS*RRLSSS
Trigger: GCTGCTGGAGAGCCTGCGGCAGGATGCGCGCTCTGT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGACATCATCCACGTGCTaGTCGCCCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVTSSTC*SPSLRC
Trigger: GCACCTCAAGGAGGGCGAGCAGCACGTGGATGATGT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAACCTTCTCCGCAAAGTaGAGGGGGCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRTFSAK*RGRSAS
Trigger: GGAGGCAGAGCGCCCCCTGCACTTTGCGGAGAAGGT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACCAGGCCCAGGAGGCTaGGGTCCTCACGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPPGPGG*GPHGTS
Trigger: TGAAGTTCCGTGAGGACCGCAGCCTCCTGGGCCTGG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCAGGCCCAGGAGGCTaGGGTCCTCACGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPGPGG*GPHGTS
Trigger: TGAAGTTCCGTGAGGACCGCAGCCTCCTGGGCCTGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTGCCGGGGAACCCCATaGTGCAGTCAGGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGCRGTP*CSQDGG
Trigger: TCCTCCATCCTGACTGCAGCATGGGGTTCCCCGGCA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTGCCGGGGAACCCCATaGTGCAGTCAGGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVCRGTP*CSQDGG
Trigger: TCCTCCATCCTGACTGCAGCATGGGGTTCCCCGGCA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCCAAGTTCCTGACTTATaGCCATCTCTCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPQVPDL*PSLQPH
Trigger: GTGGGGCTGGAGAGATGGGCATAAGTCAGGAACTTG...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGACTCTGCCATGGTTCCTaGCAGCGGAGGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRLCHGS*QRRPDW
Trigger: CCAGTCAGGCCTCCGCTGGCAGGAACCATGGCAGAG...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCTCTGCCATGGTTCCTaGCAGCGGAGGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPALCHGS*QRRPDW
Trigger: CCAGTCAGGCCTCCGCTGGCAGGAACCATGGCAGAG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAAGAGCCCCGTGTACTaGTCCAGGTGCAATGCCCGC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVKSPVY*SRCNAR
Trigger: GCGGGCATTGCACCTGGAGCAGTACACGGGGCTCTT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCAAGAGCCCCGTGTACTaGTCCAGGTGCAATGCCCGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGKSPVY*SRCNAR
Trigger: GCGGGCATTGCACCTGGAGCAGTACACGGGGCTCTT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGCACACCAGGCCATGCTaGTCAAAGAGCCCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVHTRPC*SKSPVY
Trigger: GTACACGGGGCTCTTTGAGCAGCATGGCCTGGTGTG...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGACCAGGGAGTAGCATaGCCATGTCCATCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVDQGVA*PCPSGG
Trigger: CCCGCCTGATGGACATGGGCATGCTACTCCCTGGTC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCTCAGCTCTGCCAAATaGCGCTTAGCAGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGLSSAK*RLAGSG
Trigger: CCCGCTGCCTGCTAAGCGGCATTTGGCAGAGCTGAG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAACACTCCCCTCCCCCTaGCAGCGGAGACCACACAGA +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRTLPSP*QRRPHR
Trigger: TCTGTGTGGTCTCCGCTGGCAGGGGGAGGGGAGTGT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393605.7
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGTCTGCACCCAGCTCTaGTCTCCCGGAGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPVCTQL*SPGGFL
Trigger: CAGGAAGCCTCCGGGAGACCAGAGCTGGGTGCAGAC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGGGTCCCGCCTGGGCTaGTCTCGCAAACAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEGSRLG*SRKQPG
Trigger: GCCAGGCTGTTTGCGAGACCAGCCCAGGCGGGACCC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGCCTCAGACGCCTGCTaGGTCTTGGGGCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPASDAC*VLGLRT
Trigger: AGTCCTCAGCCCCAAGACCCAGCAGGCGTCTGAGGC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCCTCAGACGCCTGCTaGGTCTTGGGGCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSASDAC*VLGLRT
Trigger: AGTCCTCAGCCCCAAGACCCAGCAGGCGTCTGAGGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACCCCGGCCCCTCCTCTaGGACCTCATCGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPPRPLL*DLIVVR
Trigger: TCTGACTACGATGAGGTCCCAGAGGAGGGGCCGGGG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCCCGGCCCCTCCTCTaGGACCTCATCGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPRPLL*DLIVVR
Trigger: TCTGACTACGATGAGGTCCCAGAGGAGGGGCCGGGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGGGGCTCCTCCTTCTTaGTCATCACTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGGAPPS*SSLWLG
Trigger: CCCCAGCCAGAGTGATGACCAAGAAGGAGGAGCCCC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATGGGACTCGGCTCGGTaGGGGCTCCTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRWDSAR*GLLLLG
Trigger: ACCAAGAAGGAGGAGCCCCCACCGAGCCGAGTCCCA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTATGCCATCCGCCATTaGGGACGCCCTCATAGGCGT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVYAIRH*GRPHRR
Trigger: ACGCCTATGAGGGCGTCCCCAATGGCGGATGGCATA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCCGTCCATGGGGTGTaGCGCAGCTATTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPVHGV*RSYCAG
Trigger: CCCAGCACAATAGCTGCGCCACACCCCATGGACGGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCAGGCGGCCCGTCCATaGGGTGTGGCGCAGCTATTG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCQAARP*GVAQLL
Trigger: CAATAGCTGCGCCACACCCCATGGACGGGCCGCCTG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGTAAGATCCCTGCGGTaGGTTCTTGTCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVVRSLR*VLVQPA
Trigger: GGCTGGCTGGACAAGAACCCACCGCAGGGATCTTAC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGACCGATGGCAGCCACGTaGGAGATGCAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRPMAAT*EMQATE
Trigger: CTCTGTGGCCTGCATCTCCCACGTGGCTGCCATCGG...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCGATGGCAGCCACGTaGGAGATGCAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPMAAT*EMQATE
Trigger: CTCTGTGGCCTGCATCTCCCACGTGGCTGCCATCGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCACTTCTGGTCCCCGATaGCAGCCACGTGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGTSGPR*QPRGRC
Trigger: GCATCTCCCACGTGGCTGCCATCGGGGACCAGAAGT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAACAGGGCCTCAGCGATaGCTCCCTGCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPTGPQR*LPAWPP
Trigger: TGGAGGCCATGCAGGGAGCCATCGCTGAGGCCCTGT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAACAGGGCCTCAGCGATaGCTCCCTGCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRTGPQR*LPAWPP
Trigger: TGGAGGCCATGCAGGGAGCCATCGCTGAGGCCCTGT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCACAGGGCCTCAGCGATaGCTCCCTGCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSTGPQR*LPAWPP
Trigger: TGGAGGCCATGCAGGGAGCCATCGCTGAGGCCCTGT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTACTTGGCCTCCAGGTaGCACCGCCGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEYLASR*HRRVLG
Trigger: CCCCAGCACCCGGCGGTGCCACCTGGAGGCCAAGTA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTGCCCTCACGGTACTTaGCCTCCAGGTGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCCPHGT*PPGGTA
Trigger: GGCGGTGCCACCTGGAGGCCAAGTACCGTGAGGGCA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGCCGAGGCACCTCTGTaGTCCGGTTGTTCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGAEAPL*SGCSEG
Trigger: TCCTTCGGAACAACCGGACCACAGAGGTGCCTCGGC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGCCGAGGCACCTCTGTaGTCCGGTTGTTCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAAEAPL*SGCSEG
Trigger: TCCTTCGGAACAACCGGACCACAGAGGTGCCTCGGC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGAGAACCAGCCCTCCTaGGCCCGCTGTAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCENQPS*ARCRLR
Trigger: CCTGAGCCTACAGCGGGCCCAGGAGGGCTGGTTCTC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCTGGCGGCTGCTTTCTaGATGGCCCCCAGCCAACCC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPALAAAF*MAPSQP
Trigger: GGGTTGGCTGGGGGCCATCCAGAAAGCAGCCGCCAG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCTGGCGGCTGCTTTCTaGATGGCCCCCAGCCAACCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCLAAAF*MAPSQP
Trigger: GGGTTGGCTGGGGGCCATCCAGAAAGCAGCCGCCAG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCTGGCGGCTGCTTTCTaGATGGCCCCCAGCCAACCC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLLAAAF*MAPSQP
Trigger: GGGTTGGCTGGGGGCCATCCAGAAAGCAGCCGCCAG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGCGTGTCCCCCATGCTaGCGGCTGCTTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPACPPC*RLLSGW
Trigger: CCATCCAGAAAGCAGCCGCCAGCATGGGGGACACGC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCGTGTCCCCCATGCTaGCGGCTGCTTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSACPPC*RLLSGW
Trigger: CCATCCAGAAAGCAGCCGCCAGCATGGGGGACACGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCATGCTGGGTCCCACTaGCAGTGCCAGCCACGCGCA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCHAGSH*QCQPRA
Trigger: TGCGCGTGGCTGGCACTGCCAGTGGGACCCAGCATG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGAAGTCACCGGCATGCTaGGTCCCACTGGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALKSPAC*VPLAVP
Trigger: TGGCACTGCCAGTGGGACCCAGCATGCCGGTGACTT...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAAGTCACCGGCATGCTaGGTCCCACTGGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVKSPAC*VPLAVP
Trigger: TGGCACTGCCAGTGGGACCCAGCATGCCGGTGACTT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCAGCCCGTGCAGGATaGGCAGCACCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPARAG*AAPSPQ
Trigger: TTGCGGAGAAGGTGCTGCCCATCCTGCACGGGCTGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATTCTTCACCACCAGGTaGCTGTCCGTGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRFFTTR*LSVPSP
Trigger: CGGGCTGGGCACGGACAGCCACCTGGTGGTGAAGAA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTTCTTCACCACCAGGTaGCTGTCCGTGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSFFTTR*LSVPSP
Trigger: CGGGCTGGGCACGGACAGCCACCTGGTGGTGAAGAA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCTTCTTCACCACCAGGTaGCTGTCCGTGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAFFTTR*LSVPSP
Trigger: CGGGCTGGGCACGGACAGCCACCTGGTGGTGAAGAA...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTGTCACCGACACGGCTaGCCAGGTACAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGCHRHG*PGTAAW
Trigger: CCATGCTGCTGTACCTGGCCAGCCGTGTCGGTGACA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTTTGTCCAGAGCAGCTaGGCTGCCAAGGACGCCCGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSFVQSS*AAKDAR
Trigger: CCGGGCGTCCTTGGCAGCCCAGCTGCTCTGGACAAA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCATTTGTCCAGAGCAGCTaGGCTGCCAAGGACGCCCGG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPFVQSS*AAKDAR
Trigger: CCGGGCGTCCTTGGCAGCCCAGCTGCTCTGGACAAA...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGGCCTTGGCACTCAGTaGCCCACACCAGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRGLGTQ*PTPGHA
Trigger: AGCATGGCCTGGTGTGGGCCACTGAGTGCCAAGGCC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGTGTCGCTGAGGCCTTaGCACTCAGTGGCCCACACC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRVSLRP*HSVAHT
Trigger: GGTGTGGGCCACTGAGTGCCAAGGCCTCAGCGACAC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCAGATGTGGCGCTTCATaGGCACAGGCCGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSRCGAS*AQAVGW
Trigger: CCACCCCACGGCCTGTGCCCATGAAGCGCCACATCT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGCGGTCAGGCTGCTCTaGGCCTGGAACTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEAVRLL*AWNSQQ
Trigger: CTGCTGGGAGTTCCAGGCTCAGAGCAGCCTGACCGC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCAGTCAGCAGAGAAGCTaGAGATGCGGTAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSASQQRS*RCGRAW
Trigger: CCACGCCCTACCGCATCTTCAGCTTCTCTGCTGACT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCAGTCAGCAGAGAAGCTaGAGATGCGGTAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSQQRS*RCGRAW
Trigger: CCACGCCCTACCGCATCTTCAGCTTCTCTGCTGACT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCCCCCGAGAAGCAGTTaGTCCCAGCCCCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEPPRSS*SQPHSP
Trigger: TGGGCTGTGGGGCTGGGATCAACTGCTTCTCGGGGG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCACTTGACCCACTCATaGGCCTGCTCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSHLTHS*ACSALS
Trigger: GGAGAGTGCGGAGCAGGCTCATGAGTGGGTCAAGTG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACACTTGACCCACTCATaGGCCTGCTCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPHLTHS*ACSALS
Trigger: GGAGAGTGCGGAGCAGGCTCATGAGTGGGTCAAGTG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGACGCGCAGGAAGCGCTTaGGCGCCGAGGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRRAGSA*APRKHH
Trigger: ATGATGTTTCCTCGGCGCTCAAGCGCTTCCTGCGCG...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACGCGCAGGAAGCGCTTaGGCGCCGAGGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPRAGSA*APRKHH
Trigger: ATGATGTTTCCTCGGCGCTCAAGCGCTTCCTGCGCG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTCTTCACAATGGCAGTaGTCTCCTCCCGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPSSQWQ*SPPAAS
Trigger: GGAAGCAGCGGGAGGAGATCACTGCCATTGTGAAGA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCAGGATCTCCAGGGTaGGCTCCTCAGCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPGSPG*APQQSW
Trigger: CCATGACTGCTGAGGAGCTCACCCTGGAGATCCTGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGAATAGTCCTTCTCCCTaGTGCCCACGTTCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVNSPSP*CPRSGD
Trigger: ATCGCCGGAACGTGGGCATCAGGGAGAAGGACTATT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTCTCATGCACCACTGTaGAGCCCCAGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSSHAPL*SPSRWV
Trigger: CACCCACCTGCTGGGGCTTCACAGTGGTGCATGAGA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCTCGAAGGGGGATCAGTaGCACACTACCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPASKGDQ*HTTQPD
Trigger: GTCCGGCTGGGTAGTGTGTCACTGATCCCCCTTCGA...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTCGAAGGGGGATCAGTaGCACACTACCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSSKGDQ*HTTQPD
Trigger: GTCCGGCTGGGTAGTGTGTCACTGATCCCCCTTCGA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTTGGGCCAAGAGGTCTaGACACCTGGACAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPLGQEV*TPGQSW
Trigger: CCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGTGAACCCGGTGGGGTaGGCAGGTTGGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEVNPVG*AGWAKR
Trigger: CCTCTTGGCCCAACCTGCTCACCCCACCGGGTTCAC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGCCCCACAAGGACAGTaGACCCGGTGGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEAPQGQ*TRWGEQ
Trigger: CTGCTCACCCCACCGGGTTCACTGTCCTTGTGGGGC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGACTGGAAGGAAGGCTaGAGTCCCCAAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALDWKEG*SPQSAA
Trigger: AGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGACTCCTCATCTCGGCCTaGGGCGGGAGCTGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRLLISA*GGSCFE
Trigger: CTCAAAACAGCTCCCGCCTCAGGCCGAGATGAGGAG...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393609.8
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACTCCCGGAGGCTTCCTaGTTTGTGTCTCCCCCACCT +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPLPEAS*FVSPPP
Trigger: AGGTGGGGGAGACACAAAGCAGGAAGCCTCCGGGAG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAGAATGTCGTGTACCTaGCCGTGCAAGCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVRMSCT*PCKPGS
Trigger: GGACCCAGGCTTGCACGGGCAGGTACACGACATTCT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCAGGCGGGCTGCGTATaGCCAAGAATGTCGTGTACC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGQAGCV*PRMSCT
Trigger: GGTACACGACATTCTTGGGCATACGCAGCCCGCCTG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCAGGCCTCAGACGCCTaGTGGGTCTTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEQASDA*WVLGLR
Trigger: CCTCAGCCCCAAGACCCAGCAGGCGTCTGAGGCCTG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCTCAGGCTGCTGGTATaGCATCCGCCATTGGGGACG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSLRLLV*HPPLGT
Trigger: CGTCCCCAATGGCGGATGGCATACCAGCAGCCTGAG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTGCTCAGCCATGGCCTaGTGCAGGGCCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCCSAMA*CRACIH
Trigger: GTGGATGCAGGCCCTGCAGCAGGCCATGGCTGAGCA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCCAGCGCGGTCAGGCTaGTCTGAGCCTGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEPARSG*SEPGTP
Trigger: GGGAGTTCCAGGCTCAGAGCAGCCTGACCGCGCTGG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATCAGCGATGGCTCCCTaGATGGCCTCCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRSAMAP*MASNHC
Trigger: GCAGTGGTTGGAGGCCATGCAGGGAGCCATCGCTGA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTCAGCGATGGCTCCCTaGATGGCCTCCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSSAMAP*MASNHC
Trigger: GCAGTGGTTGGAGGCCATGCAGGGAGCCATCGCTGA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCCACGGTGCTCCCCTaGACAGCGCTTGCAGATAAC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSATVLP*TALADN
Trigger: GTTATCTGCAAGCGCTGTGCAGGGGAGCACCGTGGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGCCACGGTGCTCCCCTaGACAGCGCTTGCAGATAAC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPATVLP*TALADN
Trigger: GTTATCTGCAAGCGCTGTGCAGGGGAGCACCGTGGC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCGCCACGGTGCTCCCCTaGACAGCGCTTGCAGATAAC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAATVLP*TALADN
Trigger: GTTATCTGCAAGCGCTGTGCAGGGGAGCACCGTGGC...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGGTAGCGGCGGTACTTaGCCTCACGGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSGSGGT*PHGTWP
Trigger: AGGCCAAGTACCGTGAGGGCAAGTACCGCCGCTACC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGGTAGCGGCGGTACTTaGCCTCACGGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRGSGGT*PHGTWP
Trigger: AGGCCAAGTACCGTGAGGGCAAGTACCGCCGCTACC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCCAGCTCCTCCTGGTTaGCAAAGAGCGGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAPAPPG*QRAGGS
Trigger: GCTACCACCCGCTCTTTGGCAACCAGGAGGAGCTGG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGTCTGTGGTGGTGACTaGAGCACACAGGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGVCGGD*STQGLV
Trigger: GACAAGGCCCTGTGTGCTGCAGTCACCACCACAGAC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGTCTGTGGTGGTGACTaGAGCACACAGGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVVCGGD*STQGLV
Trigger: GACAAGGCCCTGTGTGCTGCAGTCACCACCACAGAC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTCCATCTGCAGCGTCTaGCCCGCCTGCTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSSICSV*PACSAR
Trigger: TCTTGCAGAGCAGGCGGGGCAGACGCTGCAGATGGA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATCCATCTGCAGCGTCTaGCCCGCCTGCTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRSICSV*PACSAR
Trigger: TCTTGCAGAGCAGGCGGGGCAGACGCTGCAGATGGA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGGTCCTGTAGCAGCTTaGCGGCAGAGGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGGPVAA*RQRQSC
Trigger: ACAAGACTGCCTCTGCCGGCAAGCTGCTACAGGACC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTCCATTGGGGGTCACTaGCCGCTCATTCTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPSIGGH*PLILKV
Trigger: TACTTTGAGAATGAGCGGGCAGTGACCCCCAATGGA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGTCAGGAGGGGGCACTaGCAGGCACACAATCTCGCT +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRVRRGH*QAHNLA
Trigger: AGCGAGATTGTGTGCCTGGCAGTGCCCCCTCCTGAC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGTCAGGAGGGGGCACTaGCAGGCACACAATCTCGCT +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPVRRGH*QAHNLA
Trigger: AGCGAGATTGTGTGCCTGGCAGTGCCCCCTCCTGAC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGTCAGGAGGGGGCACTaGCAGGCACACAATCTCGCT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSVRRGH*QAHNLA
Trigger: AGCGAGATTGTGTGCCTGGCAGTGCCCCCTCCTGAC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTGCAGTTTCCGTAGTTaGAGCGGCTCTTCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVCSFRS*SGSSQG
Trigger: GCCCTGCGAAGAGCCGCTGCAACTACGGAAACTGCA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTGCAGTTTCCGTAGTTaGAGCGGCTCTTCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALCSFRS*SGSSQG
Trigger: GCCCTGCGAAGAGCCGCTGCAACTACGGAAACTGCA...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTGGATGGAAAGCTCCTaGAGTTTCCGTAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPWMESS*SFRSCS
Trigger: GCTGCAACTACGGAAACTGCAGGAGCTTTCCATCCA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGAGTCCCCAAGCTGCTaGTCCGACAGCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEESPSC*SDSVSP
Trigger: GGGGGACACGCTGTCGGAGCAGCAGCTTGGGGACTC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGTCCGAGTCCCCAAGCTaGTGCTCCGACAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPASESPS*CSDSVS
Trigger: GGACACGCTGTCGGAGCAGCAGCTTGGGGACTCGGA...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTCCGAGTCCCCAAGCTaGTGCTCCGACAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSESPS*CSDSVS
Trigger: GGACACGCTGTCGGAGCAGCAGCTTGGGGACTCGGA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCACACTTGCGGTAGATaGCCTCGGAGGTCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCHTCGR*PRRSGR
Trigger: GCGGCCTGACCTCCGAGGGCATCTACCGCAAGTGTG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCATGTCTGCCCACACTTaGGGTAGATGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGMSAHT*GRCPRR
Trigger: CCTCCGAGGGCATCTACCGCAAGTGTGGGCAGACAT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGACAGAGCGCGCATCCTaGCGCAGGCTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWETERAS*RRLSSS
Trigger: GCTGCTGGAGAGCCTGCGGCAGGATGCGCGCTCTGT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTCGCCCTCCTTGAGGTaGACAGAGCGCGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSPSLR*TERASC
Trigger: GCAGGATGCGCGCTCTGTGCACCTCAAGGAGGGCGA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTACATCATCCACGTGCTaGTCGCCCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVTSSTC*SPSLRC
Trigger: GCACCTCAAGGAGGGCGAGCAGCACGTGGATGATGT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCACATCATCCACGTGCTaGTCGCCCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSATSSTC*SPSLRC
Trigger: GCACCTCAAGGAGGGCGAGCAGCACGTGGATGATGT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCACATCATCCACGTGCTaGTCGCCCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGTSSTC*SPSLRC
Trigger: GCACCTCAAGGAGGGCGAGCAGCACGTGGATGATGT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGGTCCCACTGGCAGTaGCAGCCACGCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGSHWQ*QPRASS
Trigger: TGAAGATGCGCGTGGCTGGCACTGCCAGTGGGACCC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGGGTCCCACTGGCAGTaGCAGCCACGCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLGSHWQ*QPRASS
Trigger: TGAAGATGCGCGTGGCTGGCACTGCCAGTGGGACCC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTACCTTCTCCGCAAAGTaGAGGGGGCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLTFSAK*RGRSAS
Trigger: GGAGGCAGAGCGCCCCCTGCACTTTGCGGAGAAGGT...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCAGGCCCAGGAGGCTaGGGTCCTCACGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPGPGG*GPHGTS
Trigger: TGAAGTTCCGTGAGGACCGCAGCCTCCTGGGCCTGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTGTTTCTCTGTCTCATaGACCACTGTGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPCFSVS*TTVKPQ
Trigger: CTGGGGCTTCACAGTGGTGCATGAGACAGAGAAACA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCCTGTGCTCAGACGTTaGGCAGAAGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPPVLRR*AEETEG
Trigger: ACCCTCTGTCTCTTCTGCGCAACGTCTGAGCACAGG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGAAGGATGGGCTCCTGTaGTCAGACGTTGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPKDGLL*SDVAQK
Trigger: CTTCTGCGCAACGTCTGAGCACAGGAGCCCATCCTT...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGTGTACTGCTCCAGGTaGAATGCCCGCAGCCACTCG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRVYCSR*NARSHS
Trigger: CGAGTGGCTGCGGGCATTGCACCTGGAGCAGTACAC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCGTGTACTGCTCCAGGTaGAATGCCCGCAGCCACTCG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAVYCSR*NARSHS
Trigger: CGAGTGGCTGCGGGCATTGCACCTGGAGCAGTACAC...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCACACCAGGCCATGCTaGTCAAAGAGCCCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVHTRPC*SKSPVY
Trigger: GTACACGGGGCTCTTTGAGCAGCATGGCCTGGTGTG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGCCCACACCAGGCCATaGTGCTCAAAGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCAHTRP*CSKSPV
Trigger: CACGGGGCTCTTTGAGCAGCATGGCCTGGTGTGGGC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTGGAACGCTCAGCTCTaGCAAATGCCGCTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPWNAQL*QMPLSR
Trigger: CCTGCTAAGCGGCATTTGGCAGAGCTGAGCGTTCCA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGTCTGTGGTGGTGACTaGAGCACACAGGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGVCGGD*STQGLD
Trigger: ATCGAGGCCCTGTGTGCTGCAGTCACCACCACAGAC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429686.5
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCCCGGCCCCTCCTCTaGGACCTCATCGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPRPLL*DLIVVR
Trigger: TCTGACTACGATGAGGTCCCAGAGGAGGGGCCGGGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCCCGGCCCCTCCTCTaGGACCTCATCGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPRPLL*DLIVVR
Trigger: TCTGACTACGATGAGGTCCCAGAGGAGGGGCCGGGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTATGCCATCCGCCATTaGGGACGCCCTCATAGGCGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGYAIRH*GRPHRR
Trigger: ACGCCTATGAGGGCGTCCCCAATGGCGGATGGCATA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGCGCAGCTATTGTGCTaGGCAAGGACAAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVAQLLC*ARTSSG
Trigger: GCCTGAGCTTGTCCTTGCCCAGCACAATAGCTGCGC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGCGCAGCTATTGTGCTaGGCAAGGACAAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGAQLLC*ARTSSG
Trigger: GCCTGAGCTTGTCCTTGCCCAGCACAATAGCTGCGC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCCGTCCATGGGGTGTaGCGCAGCTATTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPVHGV*RSYCAG
Trigger: CCCAGCACAATAGCTGCGCCACACCCCATGGACGGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCCGTCCATGGGGTGTaGCGCAGCTATTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLPVHGV*RSYCAG
Trigger: CCCAGCACAATAGCTGCGCCACACCCCATGGACGGG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGTAAGATCCCTGCGGTaGGTTCTTGTCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGVRSLR*VLVQPA
Trigger: GGCTGGCTGGACAAGAACCCACCGCAGGGATCTTAC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCGATGGCAGCCACGTaGGAGATGCAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLPMAAT*EMQATE
Trigger: CTCTGTGGCCTGCATCTCCCACGTGGCTGCCATCGG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCGATGGCAGCCACGTaGGAGATGCAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPMAAT*EMQATE
Trigger: CTCTGTGGCCTGCATCTCCCACGTGGCTGCCATCGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAACTTCTGGTCCCCGATaGCAGCCACGTGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPTSGPR*QPRGRC
Trigger: GCATCTCCCACGTGGCTGCCATCGGGGACCAGAAGT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCACTTCTGGTCCCCGATaGCAGCCACGTGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSTSGPR*QPRGRC
Trigger: GCATCTCCCACGTGGCTGCCATCGGGGACCAGAAGT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCGATGGCTCCCTGCATaGCCTCCAACCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPARWLPA*PPTTAP
Trigger: AGGAGCAGTGGTTGGAGGCCATGCAGGGAGCCATCG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTACAGGGCCTCAGCGATaGCTCCCTGCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLTGPQR*LPAWPP
Trigger: TGGAGGCCATGCAGGGAGCCATCGCTGAGGCCCTGT...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTGCCCTCACGGTACTTaGCCTCCAGGTGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWECPHGT*PPGGTA
Trigger: GGCGGTGCCACCTGGAGGCCAAGTACCGTGAGGGCA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGCCGAGGCACCTCTGTaGTCCGGTTGTTCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRAEAPL*SGCSEG
Trigger: TCCTTCGGAACAACCGGACCACAGAGGTGCCTCGGC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGCCGAGGCACCTCTGTaGTCCGGTTGTTCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPAEAPL*SGCSEG
Trigger: TCCTTCGGAACAACCGGACCACAGAGGTGCCTCGGC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCCGAATCTCTCCATTaGGGGTCACTGCCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPESLH*GSLPAH
Trigger: ATGAGCGGGCAGTGACCCCCAATGGAGAGATTCGGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGTGTGCTCAAAGCCATaGGTGTCAGGAGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVVCSKP*VSGGGT
Trigger: AGTGCCCCCTCCTGACACCCATGGCTTTGAGCACAC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAACCAGCACCAGCACCTaGTTCTCACTGTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPTSTST*FSLSPW
Trigger: CCAGGGGGACAGTGAGAACCAGGTGCTGGTGCTGGT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCACCAGCACCAGCACCTaGTTCTCACTGTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPATSTST*FSLSPW
Trigger: CCAGGGGGACAGTGAGAACCAGGTGCTGGTGCTGGT...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCACCAGCACCAGCACCTaGTTCTCACTGTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSTSTST*FSLSPW
Trigger: CCAGGGGGACAGTGAGAACCAGGTGCTGGTGCTGGT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCTGGCGGCTGCTTTCTaGATGGCCCCCAGCCAACCC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWELAAAF*MAPSQP
Trigger: GGGTTGGCTGGGGGCCATCCAGAAAGCAGCCGCCAG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGCGTGTCCCCCATGCTaGCGGCTGCTTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLACPPC*RLLSGW
Trigger: CCATCCAGAAAGCAGCCGCCAGCATGGGGGACACGC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGCGTGTCCCCCATGCTaGCGGCTGCTTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCACPPC*RLLSGW
Trigger: CCATCCAGAAAGCAGCCGCCAGCATGGGGGACACGC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGCGTGTCCCCCATGCTaGCGGCTGCTTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAACPPC*RLLSGW
Trigger: CCATCCAGAAAGCAGCCGCCAGCATGGGGGACACGC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTAGCCAGGTTAGGCGCTaGGCGCGAGTGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSQVRR*ARVKSP
Trigger: TGGGCTCTTCACTCGCGCCCAGCGCCTAACCTGGCT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGAGCCAGGTTAGGCGCTaGGCGCGAGTGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPASQVRR*ARVKSP
Trigger: TGGGCTCTTCACTCGCGCCCAGCGCCTAACCTGGCT...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTCCTGCCCATCTGTCTaGAAGAGCGTGGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALSCPSV*KSVGPN
Trigger: GTTTGGGCCCACGCTCTTCCAGACAGATGGGCAGGA...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCAAGTCACCGGCATGCTaGGTCCCACTGGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSKSPAC*VPLAVP
Trigger: TGGCACTGCCAGTGGGACCCAGCATGCCGGTGACTT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCAGCCCGTGCAGGATaGGCAGCACCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPARAG*AAPSPQ
Trigger: TTGCGGAGAAGGTGCTGCCCATCCTGCACGGGCTGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTTTCTTCACCACCAGGTaGCTGTCCGTGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLFFTTR*LSVPSP
Trigger: CGGGCTGGGCACGGACAGCCACCTGGTGGTGAAGAA...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTATGGCCTCCATGGCCTaGTGCTTCTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVMASMA*CFFTTR
Trigger: CCTGGTGGTGAAGAAGCACCAGGCCATGGAGGCCAT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCATGGCCTCCATGGCCTaGTGCTTCTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGMASMA*CFFTTR
Trigger: CCTGGTGGTGAAGAAGCACCAGGCCATGGAGGCCAT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGCAGCATGGCCTCCATaGCCTGGTGCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAAAWPP*PGASSP
Trigger: TGGTGAAGAAGCACCAGGCCATGGAGGCCATGCTGC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGCAGCATGGCCTCCATaGCCTGGTGCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGAAWPP*PGASSP
Trigger: TGGTGAAGAAGCACCAGGCCATGGAGGCCATGCTGC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACCAGGTACAGCAGCATaGCCTCCATGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPPGTAA*PPWPGA
Trigger: AGCACCAGGCCATGGAGGCCATGCTGCTGTACCTGG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCCAGGTACAGCAGCATaGCCTCCATGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAPGTAA*PPWPGA
Trigger: AGCACCAGGCCATGGAGGCCATGCTGCTGTACCTGG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCAGGTACAGCAGCATaGCCTCCATGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPGTAA*PPWPGA
Trigger: AGCACCAGGCCATGGAGGCCATGCTGCTGTACCTGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCACCGACACGGCTaGCCAGGTACAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSCHRHG*PGTAAW
Trigger: CCATGCTGCTGTACCTGGCCAGCCGTGTCGGTGACA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATGTCACCGACACGGCTaGCCAGGTACAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRCHRHG*PGTAAW
Trigger: CCATGCTGCTGTACCTGGCCAGCCGTGTCGGTGACA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGCCCCAGCAGGTGGGTaGCCTGAGTTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGAPAGG*PEFLLH
Trigger: GTGAAGAAGAAACTCAGGCCACCCACCTGCTGGGGC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGCCCCAGCAGGTGGGTaGCCTGAGTTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALAPAGG*PEFLLH
Trigger: GTGAAGAAGAAACTCAGGCCACCCACCTGCTGGGGC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTGCCCCAGCAGGTGGGTaGCCTGAGTTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVAPAGG*PEFLLH
Trigger: GTGAAGAAGAAACTCAGGCCACCCACCTGCTGGGGC...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGATGCTGCAGTCAGGATaGAGGATGTGGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVMLQSG*RMWVVG
Trigger: CCCCACAACCCACATCCTCCATCCTGACTGCAGCAT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCCTCTGAAAGGGTGGTaGTCCTCCCAAGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPPLKGW*SSQVPD
Trigger: GTCAGGAACTTGGGAGGACCACCACCCTTTCAGAGG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGGTGAGCGGAAGATGTaGCGCTTCATGGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSGERKM*RFMGTG
Trigger: GCCTGTGCCCATGAAGCGCCACATCTTCCGCTCACC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCTGGCCCAGAGCGCTGTaGCTACACGTGACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAWPRAL*LHVTPD
Trigger: GTCAGGAGTCACGTGTAGCCACAGCGCTCTGGGCCA...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393605.7
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCACTTGACCCACTCATaGGCCTGCTCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCHLTHS*ACSALS
Trigger: GGAGAGTGCGGAGCAGGCTCATGAGTGGGTCAAGTG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGTCAGGCCGCACTGCGTaGTGTAGTCCACACAGCGGT +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPASGRTA*CSPHSG
Trigger: ACCGCTGTGTGGACTACATCACGCAGTGCGGCCTGA...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTCAGGCCGCACTGCGTaGTGTAGTCCACACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSGRTA*CSPHSG
Trigger: ACCGCTGTGTGGACTACATCACGCAGTGCGGCCTGA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCGCGCAGGAAGCGCTTaGGCGCCGAGGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLRAGSA*APRKHH
Trigger: ATGATGTTTCCTCGGCGCTCAAGCGCTTCCTGCGCG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCGCGCAGGAAGCGCTTaGGCGCCGAGGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCRAGSA*APRKHH
Trigger: ATGATGTTTCCTCGGCGCTCAAGCGCTTCCTGCGCG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCTCTTCACAATGGCAGTaGTCTCCTCCCGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSASSQWQ*SPPAAS
Trigger: GGAAGCAGCGGGAGGAGATCACTGCCATTGTGAAGA...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCTTCACAATGGCAGTaGTCTCCTCCCGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSSQWQ*SPPAAS
Trigger: GGAAGCAGCGGGAGGAGATCACTGCCATTGTGAAGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGATACACTGTGCAGATaGAGTCACCGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALDTLCR*SHRHAG
Trigger: CCCAGCATGCCGGTGACTTCATCTGCACAGTGTATC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGATACACTGTGCAGATaGAGTCACCGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGDTLCR*SHRHAG
Trigger: CCCAGCATGCCGGTGACTTCATCTGCACAGTGTATC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTGGATGCTGGGACCTTaGTATGCTGCTCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPWMLGP*YAAQSL
Trigger: CAGAGACTGAGCAGCATATCAAGGTCCCAGCATCCA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGTGGATGCTGGGACCTTaGTATGCTGCTCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVWMLGP*YAAQSL
Trigger: CAGAGACTGAGCAGCATATCAAGGTCCCAGCATCCA...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCAGGATCTCCAGGGTaGGCTCCTCAGCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPGSPG*APQQSW
Trigger: CCATGACTGCTGAGGAGCTCACCCTGGAGATCCTGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAATAGTCCTTCTCCCTaGTGCCCACGTTCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVNSPSP*CPRSGD
Trigger: ATCGCCGGAACGTGGGCATCAGGGAGAAGGACTATT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCAATAGTCCTTCTCCCTaGTGCCCACGTTCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGNSPSP*CPRSGD
Trigger: ATCGCCGGAACGTGGGCATCAGGGAGAAGGACTATT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCAATAGTCCTTCTCCCTaGTGCCCACGTTCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSANSPSP*CPRSGD
Trigger: ATCGCCGGAACGTGGGCATCAGGGAGAAGGACTATT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTCGAAGGGGGATCAGTaGCACACTACCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSKGDQ*HTTQPD
Trigger: GTCCGGCTGGGTAGTGTGTCACTGATCCCCCTTCGA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCAGCATAAGGGGTGTCTaGACAGAAGGCTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSIRGV*TEGFQR
Trigger: CCGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTTGGGCCAAGAGGTCTaGACACCTGGACAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGLGQEV*TPGQSW
Trigger: CCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGGTCCTCCCAAGTTCCTaGCTTATGCCCATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVVLPSS*LMPISP
Trigger: TGGAGAGATGGGCATAAGTCAGGAACTTGGGAGGAC...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGAGAGCTCCCTCCCCGTaGGCTGAGTGCTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPARAPSP*AECSST
Trigger: TGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCT...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTAGAGCTCCCTCCCCGTaGGCTGAGTGCTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCRAPSP*AECSST
Trigger: TGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCGCTGTGGCTACACGTaGCTCCTGACCCCCGTATGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWERCGYT*LLTPVW
Trigger: CCATACGGGGGTCAGGAGTCACGTGTAGCCACAGCG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393605.7
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCAGAATGTCGTGTACCTaGCCGTGCAAGCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSRMSCT*PCKPGS
Trigger: GGACCCAGGCTTGCACGGGCAGGTACACGACATTCT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCAGGCGGGCTGCGTATaGCCAAGAATGTCGTGTACC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSQAGCV*PRMSCT
Trigger: GGTACACGACATTCTTGGGCATACGCAGCCCGCCTG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCTCAGGCTGCTGGTATaGCATCCGCCATTGGGGACG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCLRLLV*HPPLGT
Trigger: CGTCCCCAATGGCGGATGGCATACCAGCAGCCTGAG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCTCAGGCTGCTGGTATaGCATCCGCCATTGGGGACG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLLRLLV*HPPLGT
Trigger: CGTCCCCAATGGCGGATGGCATACCAGCAGCCTGAG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCAGGACAAGCTCAGGCTaGTGGTATGCCATCCGCCAT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSARTSSG*WYAIRH
Trigger: ATGGCGGATGGCATACCAGCAGCCTGAGCTTGTCCT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGTGGCGCAGCTATTGTaGTGGGCAAGGACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGVAQLL*WARTSS
Trigger: TGAGCTTGTCCTTGCCCAGCACAATAGCTGCGCCAC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTCCACATCACTCTCTaGCCGGAAGGCAAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVLHITL*PEGKGS
Trigger: CGAACCTTTGCCTTCCGGGCAGAGAGTGATGTGGAG...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGATGGCCTCCAACCACTaGTCCTTCTCTAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPMASNH*SFSSSE
Trigger: CTCAGAGCTAGAGAAGGAGCAGTGGTTGGAGGCCAT...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTTCAGCGATGGCTCCCTaGATGGCCTCCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLSAMAP*MASNHC
Trigger: GCAGTGGTTGGAGGCCATGCAGGGAGCCATCGCTGA...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGTAGCGGCGGTACTTaGCCTCACGGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGSGGT*PHGTWP
Trigger: AGGCCAAGTACCGTGAGGGCAAGTACCGCCGCTACC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCAGCTCCTCCTGGTTaGCAAAGAGCGGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPAPPG*QRAGGS
Trigger: GCTACCACCCGCTCTTTGGCAACCAGGAGGAGCTGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCAGCTCCTCCTGGTTaGCAAAGAGCGGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPAPPG*QRAGGS
Trigger: GCTACCACCCGCTCTTTGGCAACCAGGAGGAGCTGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGTCTGTGGTGGTGACTaGAGCACACAGGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSVCGGD*STQGLV
Trigger: GACAAGGCCCTGTGTGCTGCAGTCACCACCACAGAC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCGAAGGAATTCCATCTaGAGCGTCTGCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCRRNSI*SVCPAC
Trigger: GCAGGCGGGGCAGACGCTGCAGATGGAATTCCTTCG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCGGTCCTGTAGCAGCTTaGCGGCAGAGGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAGPVAA*RQRQSC
Trigger: ACAAGACTGCCTCTGCCGGCAAGCTGCTACAGGACC...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGCAGTTTCCGTAGTTaGAGCGGCTCTTCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSCSFRS*SGSSQG
Trigger: GCCCTGCGAAGAGCCGCTGCAACTACGGAAACTGCA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTACAGCGTGTCCCCCATaGTGGCGGCTGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLTACPP*WRLLSG
Trigger: TCCAGAAAGCAGCCGCCAGCATGGGGGACACGCTGT...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTACAGCGTGTCCCCCATaGTGGCGGCTGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCTACPP*WRLLSG
Trigger: TCCAGAAAGCAGCCGCCAGCATGGGGGACACGCTGT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTCCGAGTCCCCAAGCTaGTGCTCCGACAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWESESPS*CSDSVS
Trigger: GGACACGCTGTCGGAGCAGCAGCTTGGGGACTCGGA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCATGTCTGCCCACACTTaGGGTAGATGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSMSAHT*GRCPRR
Trigger: CCTCCGAGGGCATCTACCGCAAGTGTGGGCAGACAT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTCGCCCTCCTTGAGGTaGACAGAGCGCGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWESPSLR*TERASC
Trigger: GCAGGATGCGCGCTCTGTGCACCTCAAGGAGGGCGA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAACATCATCCACGTGCTaGTCGCCCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRTSSTC*SPSLRC
Trigger: GCACCTCAAGGAGGGCGAGCAGCACGTGGATGATGT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCACATCATCCACGTGCTaGTCGCCCTCCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSTSSTC*SPSLRC
Trigger: GCACCTCAAGGAGGGCGAGCAGCACGTGGATGATGT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGTGATCTCCTCCCGCTaGTTCCTGAGCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGVISSR*FLSSSS
Trigger: TGAGGAAGAGCTCAGGAAGCAGCGGGAGGAGATCAC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGGCTGGGACCTTGATATaGTGCTCAGTCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPAGTLI*CSVSAF
Trigger: GAAGGCAGAGACTGAGCAGCATATCAAGGTCCCAGC...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGACCTTCTCCGCAAAGTaGAGGGGGCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWETFSAK*RGRSAS
Trigger: GGAGGCAGAGCGCCCCCTGCACTTTGCGGAGAAGGT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCTGTGCTCAGACGTTaGGCAGAAGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPVLRR*AEETEG
Trigger: ACCCTCTGTCTCTTCTGCGCAACGTCTGAGCACAGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGAAGGATGGGCTCCTGTaGTCAGACGTTGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALKDGLL*SDVAQK
Trigger: CTTCTGCGCAACGTCTGAGCACAGGAGCCCATCCTT...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTAAGGATGGGCTCCTGTaGTCAGACGTTGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVKDGLL*SDVAQK
Trigger: CTTCTGCGCAACGTCTGAGCACAGGAGCCCATCCTT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAATGTGGGTTGTGGGGTaGAGTTTCCCATGCACCCCC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPMWVVG*SFPCTP
Trigger: GGGGGTGCATGGGAAACTGCACCCCACAACCCACAT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCAAGTTCCTGACTTATaGCCATCTCTCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPQVPDL*PSLQPH
Trigger: GTGGGGCTGGAGAGATGGGCATAAGTCAGGAACTTG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGAGAGTCATCGAACTCTaGGAACAGGCGTACCGGCTT +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPRVIEL*EQAYRL
Trigger: AAGCCGGTACGCCTGTTCCCAGAGTTCGATGACTCT...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGGGGCTCCTCCTTCTTaGTCATCACTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLGAPPS*SSLWLG
Trigger: CCCCAGCCAGAGTGATGACCAAGAAGGAGGAGCCCC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGGGCTCCTCCTTCTTaGTCATCACTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGAPPS*SSLWLG
Trigger: CCCCAGCCAGAGTGATGACCAAGAAGGAGGAGCCCC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTATGCCATCCGCCATTaGGGACGCCCTCATAGGCGT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSYAIRH*GRPHRR
Trigger: ACGCCTATGAGGGCGTCCCCAATGGCGGATGGCATA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCACAAGCTCAGGCTGCTaGTATGCCATCCGCCATTGG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSATSSGC*YAIRHW
Trigger: CCAATGGCGGATGGCATACCAGCAGCCTGAGCTTGT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCGCGCAGCTATTGTGCTaGGCAAGGACAAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAAQLLC*ARTSSG
Trigger: GCCTGAGCTTGTCCTTGCCCAGCACAATAGCTGCGC...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGTAAGATCCCTGCGGTaGGTTCTTGTCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRVRSLR*VLVQPA
Trigger: GGCTGGCTGGACAAGAACCCACCGCAGGGATCTTAC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGTAAGATCCCTGCGGTaGGTTCTTGTCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSVRSLR*VLVQPA
Trigger: GGCTGGCTGGACAAGAACCCACCGCAGGGATCTTAC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCCGATGGCAGCCACGTaGGAGATGCAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEPMAAT*EMQATE
Trigger: CTCTGTGGCCTGCATCTCCCACGTGGCTGCCATCGG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGATCACTTCAAACTTCTaGTCCCCGATGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPITSNF*SPMAAT
Trigger: CGTGGCTGCCATCGGGGACCAGAAGTTTGAAGTGAT...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCATGCCAATGCCCAGGTaGTACTCCTCTAGATTCTTG +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPMPMPR*YSSRFL
Trigger: CAAGAATCTAGAGGAGTACCACCTGGGCATTGGCAT...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCGATGGCTCCCTGCATaGCCTCCAACCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCRWLPA*PPTTAP
Trigger: AGGAGCAGTGGTTGGAGGCCATGCAGGGAGCCATCG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCGATGGCTCCCTGCATaGCCTCCAACCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLRWLPA*PPTTAP
Trigger: AGGAGCAGTGGTTGGAGGCCATGCAGGGAGCCATCG...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTTGTCCAGCTCCTCCTaGTTGCCAAAGAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSLSSSS*LPKSGW
Trigger: CCACCCGCTCTTTGGCAACCAGGAGGAGCTGGACAA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGCCGAGGCACCTCTGTaGTCCGGTTGTTCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCAEAPL*SGCSEG
Trigger: TCCTTCGGAACAACCGGACCACAGAGGTGCCTCGGC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCCCGAATCTCTCCATTaGGGGTCACTGCCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAPESLH*GSLPAH
Trigger: ATGAGCGGGCAGTGACCCCCAATGGAGAGATTCGGG...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCGGCACACAATCTCGCTaGCCCGAATCTCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAGTQSR*PESLHW
Trigger: CCAATGGAGAGATTCGGGCCAGCGAGATTGTGTGCC...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGGCACACAATCTCGCTaGCCCGAATCTCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGGTQSR*PESLHW
Trigger: CCAATGGAGAGATTCGGGCCAGCGAGATTGTGTGCC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGTGTGCTCAAAGCCATaGGTGTCAGGAGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPVCSKP*VSGGGT
Trigger: AGTGCCCCCTCCTGACACCCATGGCTTTGAGCACAC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTTCTCACTGTCCCCCTaGATGGAAAGCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPFSLSP*MESSCS
Trigger: ACTGCAGGAGCTTTCCATCCAGGGGGACAGTGAGAA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTACCAGCACCAGCACCTaGTTCTCACTGTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCTSTST*FSLSPW
Trigger: CCAGGGGGACAGTGAGAACCAGGTGCTGGTGCTGGT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGAGCCAGGTTAGGCGCTaGGCGCGAGTGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWESQVRR*ARVKSP
Trigger: TGGGCTCTTCACTCGCGCCCAGCGCCTAACCTGGCT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CTGCTGTTCTGGAGTTTGTTGGGAGGAGCAGGGGGCTCCCTTCCGGCAGGGCCCTTGTGCACGTTCATCTaGTTCGTGTCTGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LLFWSLLGGAGGSLPAGPLCTFI*FVSEKH
Trigger: GTGCTTCTCAGACACGAACCAGATGAACGTGCACAA...GGGCCCTGCCGGAAGGGAGCCCCCTGCTCCTCCCAACAAACTCCAGAACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTAAGTCACCGGCATGCTaGGTCCCACTGGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLKSPAC*VPLAVP
Trigger: TGGCACTGCCAGTGGGACCCAGCATGCCGGTGACTT...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTAAGTCACCGGCATGCTaGGTCCCACTGGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCKSPAC*VPLAVP
Trigger: TGGCACTGCCAGTGGGACCCAGCATGCCGGTGACTT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCCAGCCCGTGCAGGATaGGCAGCACCTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEPARAG*AAPSPQ
Trigger: TTGCGGAGAAGGTGCTGCCCATCCTGCACGGGCTGG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAATGGCCTCCATGGCCTaGTGCTTCTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRMASMA*CFFTTR
Trigger: CCTGGTGGTGAAGAAGCACCAGGCCATGGAGGCCAT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCATGGCCTCCATGGCCTaGTGCTTCTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSMASMA*CFFTTR
Trigger: CCTGGTGGTGAAGAAGCACCAGGCCATGGAGGCCAT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAATGGCCTCCATGGCCTaGTGCTTCTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPMASMA*CFFTTR
Trigger: CCTGGTGGTGAAGAAGCACCAGGCCATGGAGGCCAT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCAGCATGGCCTCCATaGCCTGGTGCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSAAWPP*PGASSP
Trigger: TGGTGAAGAAGCACCAGGCCATGGAGGCCATGCTGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCAGGTACAGCAGCATaGCCTCCATGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPGTAA*PPWPGA
Trigger: AGCACCAGGCCATGGAGGCCATGCTGCTGTACCTGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTCCAGGTACAGCAGCATaGCCTCCATGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCPGTAA*PPWPGA
Trigger: AGCACCAGGCCATGGAGGCCATGCTGCTGTACCTGG...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTTGTCACCGACACGGCTaGCCAGGTACAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLCHRHG*PGTAAW
Trigger: CCATGCTGCTGTACCTGGCCAGCCGTGTCGGTGACA...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTTCATCATGCCATGCTTaGTGTCACCGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVSSCHA*CHRHGW
Trigger: CCAGCCGTGTCGGTGACACCAAGCATGGCATGATGA...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCATCATGCCATGCTTaGTGTCACCGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGSSCHA*CHRHGW
Trigger: CCAGCCGTGTCGGTGACACCAAGCATGGCATGATGA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGCCCCAGCAGGTGGGTaGCCTGAGTTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSAPAGG*PEFLLH
Trigger: GTGAAGAAGAAACTCAGGCCACCCACCTGCTGGGGC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTCAGGATGGAGGATGTaGGTTGTGGGGTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPSGWRM*VVGCSF
Trigger: GAAACTGCACCCCACAACCCACATCCTCCATCCTGA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTATGCTGCAGTCAGGATaGAGGATGTGGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELPPRELSAPLQHPLSAVMLQSG*RMWVVG
Trigger: CCCCACAACCCACATCCTCCATCCTGACTGCAGCAT...AACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAACACCTGGACAGAGTTaGGAGAGGTTCCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPTPGQS*ERFLPR
Trigger: CCTGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCACACCTGGACAGAGTTaGGAGAGGTTCCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSTPGQS*ERFLPR
Trigger: CCTGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCTCTGAAAGGGTGGTaGTCCTCCCAAGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPLKGW*SSQVPD
Trigger: GTCAGGAACTTGGGAGGACCACCACCCTTTCAGAGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCAGTCACACAGCAAGCTaGAAGCAGAGCCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSASHTAS*KQSLGA
Trigger: TGCACCCAGGCTCTGCTTCCAGCTTGCTGTGTGACT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359373.9
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGTGTCGCTGAGGCCTTaGCACTCAGTGGCCCACACC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEVSLRP*HSVAHT
Trigger: GGTGTGGGCCACTGAGTGCCAAGGCCTCAGCGACAC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGAGATGTGGCGCTTCATaGGCACAGGCCGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWERCGAS*AQAVGW
Trigger: CCACCCCACGGCCTGTGCCCATGAAGCGCCACATCT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGTGAGCGGAAGATGTaGCGCTTCATGGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGERKM*RFMGTG
Trigger: GCCTGTGCCCATGAAGCGCCACATCTTCCGCTCACC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTCTCTTGGAGGTTTTTaGGCCCAGGTATGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPSLGGF*AQVWLC
Trigger: GCAAAGCCATACCTGGGCTCAAAAACCTCCAAGAGA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR TCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGAGTCAGCAGAGAAGCTaGAGATGCGGTAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPASQQRS*RCGRAW
Trigger: CCACGCCCTACCGCATCTTCAGCTTCTCTGCTGACT...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTAGTCAGCAGAGAAGCTaGAGATGCGGTAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSQQRS*RCGRAW
Trigger: CCACGCCCTACCGCATCTTCAGCTTCTCTGCTGACT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR TCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCTCTTCACAATGGCAGTaGTCTCCTCCCGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPASSQWQ*SPPAAS
Trigger: GGAAGCAGCGGGAGGAGATCACTGCCATTGTGAAGA...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTCTTCACAATGGCAGTaGTCTCCTCCCGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSSSQWQ*SPPAAS
Trigger: GGAAGCAGCGGGAGGAGATCACTGCCATTGTGAAGA...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCGATACACTGTGCAGATaGAGTCACCGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPADTLCR*SHRHAG
Trigger: CCCAGCATGCCGGTGACTTCATCTGCACAGTGTATC...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGATACACTGTGCAGATaGAGTCACCGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPDTLCR*SHRHAG
Trigger: CCCAGCATGCCGGTGACTTCATCTGCACAGTGTATC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTGGATGCTGGGACCTTaGTATGCTGCTCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGWMLGP*YAAQSL
Trigger: CAGAGACTGAGCAGCATATCAAGGTCCCAGCATCCA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCCAGGATCTCCAGGGTaGGCTCCTCAGCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEPGSPG*APQQSW
Trigger: CCATGACTGCTGAGGAGCTCACCCTGGAGATCCTGG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCAATAGTCCTTCTCCCTaGTGCCCACGTTCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSNSPSP*CPRSGD
Trigger: ATCGCCGGAACGTGGGCATCAGGGAGAAGGACTATT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTCTCATGCACCACTGTaGAGCCCCAGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWESHAPL*SPSRWV
Trigger: CACCCACCTGCTGGGGCTTCACAGTGGTGCATGAGA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTCGAAGGGGGATCAGTaGCACACTACCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWESKGDQ*HTTQPD
Trigger: GTCCGGCTGGGTAGTGTGTCACTGATCCCCCTTCGA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCAGCATAAGGGGTGTCTaGACAGAAGGCTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPASIRGV*TEGFQR
Trigger: CCGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCT...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCAGCATAAGGGGTGTCTaGACAGAAGGCTTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSSIRGV*TEGFQR
Trigger: CCGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR TCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGACTGGAAGGAAGGCTaGAGTCCCCAAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLDWKEG*SPQSAA
Trigger: AGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGACTGGAAGGAAGGCTaGAGTCCCCAAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCDWKEG*SPQSAA
Trigger: AGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR TCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCCCCCTGGATCTCATTTaGTCCTCCCAACAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGPLDLI*SSQQPV
Trigger: AACAGGCTGTTGGGAGGATCAAATGAGATCCAGGGG...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359373.9
CDS-3UTR TCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAAGACAGCAGCTATTCTaGAGGGCTCCTCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPRQQLF*RAPHLG
Trigger: GCCGAGATGAGGAGCCCTTCAGAATAGCTGCTGTCT...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCAGACAGCAGCTATTCTaGAGGGCTCCTCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPARQQLF*RAPHLG
Trigger: GCCGAGATGAGGAGCCCTTCAGAATAGCTGCTGTCT...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR TCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGCTACACGTGACTCCTaGCCCCCGTATGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAATRDS*PPYGKR
Trigger: TCTCTTGCCATACGGGGGTCAGGAGTCACGTGTAGC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393605.7
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTAGAATGTCGTGTACCTaGCCGTGCAAGCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCRMSCT*PCKPGS
Trigger: GGACCCAGGCTTGCACGGGCAGGTACACGACATTCT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAAGGACAAGCTCAGGCTaGTGGTATGCCATCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRRTSSG*WYAIRH
Trigger: ATGGCGGATGGCATACCAGCAGCCTGAGCTTGTCCT...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCAGGACAAGCTCAGGCTaGTGGTATGCCATCCGCCAT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSRTSSG*WYAIRH
Trigger: ATGGCGGATGGCATACCAGCAGCCTGAGCTTGTCCT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGTGGCGCAGCTATTGTaGTGGGCAAGGACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSVAQLL*WARTSS
Trigger: TGAGCTTGTCCTTGCCCAGCACAATAGCTGCGCCAC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCAGTGGCGCAGCTATTGTaGTGGGCAAGGACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPVAQLL*WARTSS
Trigger: TGAGCTTGTCCTTGCCCAGCACAATAGCTGCGCCAC...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCTCCACATCACTCTCTaGCCGGAAGGCAAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSLHITL*PEGKGS
Trigger: CGAACCTTTGCCTTCCGGGCAGAGAGTGATGTGGAG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACTCCACATCACTCTCTaGCCGGAAGGCAAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPLHITL*PEGKGS
Trigger: CGAACCTTTGCCTTCCGGGCAGAGAGTGATGTGGAG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGATGGCCTCCAACCACTaGTCCTTCTCTAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALMASNH*SFSSSE
Trigger: CTCAGAGCTAGAGAAGGAGCAGTGGTTGGAGGCCAT...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTCAGCGATGGCTCCCTaGATGGCCTCCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWESAMAP*MASNHC
Trigger: GCAGTGGTTGGAGGCCATGCAGGGAGCCATCGCTGA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCCAGCTCCTCCTGGTTaGCAAAGAGCGGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEPAPPG*QRAGGS
Trigger: GCTACCACCCGCTCTTTGGCAACCAGGAGGAGCTGG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGTCTGTGGTGGTGACTaGAGCACACAGGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAVCGGD*STQGLV
Trigger: GACAAGGCCCTGTGTGCTGCAGTCACCACCACAGAC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGGTCCTGTAGCAGCTTaGCGGCAGAGGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCGPVAA*RQRQSC
Trigger: ACAAGACTGCCTCTGCCGGCAAGCTGCTACAGGACC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGGTCCTGTAGCAGCTTaGCGGCAGAGGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLGPVAA*RQRQSC
Trigger: ACAAGACTGCCTCTGCCGGCAAGCTGCTACAGGACC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR GCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTGCAGTTTCCGTAGTTaGAGCGGCTCTTCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCCSFRS*SGSSQG
Trigger: GCCCTGCGAAGAGCCGCTGCAACTACGGAAACTGCA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGTGGATGGAAAGCTCCTaGAGTTTCCGTAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPWMESS*SFRSCS
Trigger: GCTGCAACTACGGAAACTGCAGGAGCTTTCCATCCA...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGATGTCTGCCCACACTTaGGGTAGATGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAMSAHT*GRCPRR
Trigger: CCTCCGAGGGCATCTACCGCAAGTGTGGGCAGACAT...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTATGTCTGCCCACACTTaGGGTAGATGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLMSAHT*GRCPRR
Trigger: CCTCCGAGGGCATCTACCGCAAGTGTGGGCAGACAT...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGAAACATCATCCACGTaGTGCTCGCCCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSETSST*CSPSLR
Trigger: CCTCAAGGAGGGCGAGCAGCACGTGGATGATGTTTC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CAGGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCGAAACATCATCCACGTaGTGCTCGCCCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QVGPRGLNTWTELGEVPAETSST*CSPSLR
Trigger: CCTCAAGGAGGGCGAGCAGCACGTGGATGATGTTTC...GGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGTGATCTCCTCCCGCTaGTTCCTGAGCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSVISSR*FLSSSS
Trigger: TGAGGAAGAGCTCAGGAAGCAGCGGGAGGAGATCAC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGTGATCTCCTCCCGCTaGTTCCTGAGCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRVISSR*FLSSSS
Trigger: TGAGGAAGAGCTCAGGAAGCAGCGGGAGGAGATCAC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGGCTGGGACCTTGATATaGTGCTCAGTCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALAGTLI*CSVSAF
Trigger: GAAGGCAGAGACTGAGCAGCATATCAAGGTCCCAGC...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGCTGGGACCTTGATATaGTGCTCAGTCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGAGTLI*CSVSAF
Trigger: GAAGGCAGAGACTGAGCAGCATATCAAGGTCCCAGC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCAAAGCGCAGCTCTCAGCCCTGTAGAAGCTCAGCCAAGAGCTCCCTCCCCGTGAACTTCATCATGCCATaGTTGGTGTCACCGACACGG +
Preference number: 4 (lower is better)
Translates to: PKRSSQPCRSSAKSSLPVNFIMP*LVSPTR
Trigger: CCGTGTCGGTGACACCAAGCATGGCATGATGAAGTT...CACGGGGAGGGAGCTCTTGGCTGAGCTTCTACAGGGCTGAGAGCTGCGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGTTGGGCCAAGAGGTCTGAACACCTGGACAGAGTTGGGAGAGGTTCCTGCCCACCTGTGCTCAGACGTTaGGCAGAAGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GWAKRSEHLDRVGRGSCPPVLRR*AEETEG
Trigger: ACCCTCTGTCTCTTCTGCGCAACGTCTGAGCACAGG...TGGGCAGGAACCTCTCCCAACTCTGTCCAGGTGTTCAGACCTCTTGGCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCCCTGTGCTCAGACGTTaGGCAGAAGAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSPVLRR*AEETEG
Trigger: ACCCTCTGTCTCTTCTGCGCAACGTCTGAGCACAGG...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR GCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTATGTGGGTTGTGGGGTaGAGTTTCCCATGCACCCCC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLMWVVG*SFPCTP
Trigger: GGGGGTGCATGGGAAACTGCACCCCACAACCCACAT...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGATGTGGGTTGTGGGGTaGAGTTTCCCATGCACCCCC +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAMWVVG*SFPCTP
Trigger: GGGGGTGCATGGGAAACTGCACCCCACAACCCACAT...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR GCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGCTCAGCTCTGCCAAATaGCGCTTAGCAGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWELSSAK*RLAGSG
Trigger: CCCGCTGCCTGCTAAGCGGCATTTGGCAGAGCTGAG...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATGGAACGCTCAGCTCTaGCAAATGCCGCTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRWNAQL*QMPLSR
Trigger: CCTGCTAAGCGGCATTTGGCAGAGCTGAGCGTTCCA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359373.9
ENST00000393609.8
CDS-3UTR GCA 90 bp AAGCTCAGCCAAGAGCTCCCTCCCCGTGAGCTGAGTGCTCCTCTACAGCACCCGCTGTACTCTGCCTCCTaGTACAATGGCTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KLSQELPPRELSAPLQHPLYSAS*YNGSEG
Trigger: TCCTTCAGAGCCATTGTAGCAGGAGGCAGAGTACAG...CGGGTGCTGTAGAGGAGCACTCAGCTCACGGGGAGGGAGCTCTTGGCTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCGAGGCTGCGTTCTCTTaGAGGTTTTTGAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGEAAFS*RFLSPG
Trigger: ACCTGGGCTCAAAAACCTCCAAGAGAACGCAGCCTC...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334211.12
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGGGGGCTCCTCCTTCTTaGTCATCACTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWEGAPPS*SSLWLG
Trigger: CCCCAGCCAGAGTGATGACCAAGAAGGAGGAGCCCC...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393609.8
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGTATGCCATCCGCCATTaGGGACGCCCTCATAGGCGT +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAYAIRH*GRPHRR
Trigger: ACGCCTATGAGGGCGTCCCCAATGGCGGATGGCATA...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTATGCCATCCGCCATTaGGGACGCCCTCATAGGCGT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCYAIRH*GRPHRR
Trigger: ACGCCTATGAGGGCGTCCCCAATGGCGGATGGCATA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCACAAGCTCAGGCTGCTaGTATGCCATCCGCCATTGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSTSSGC*YAIRHW
Trigger: CCAATGGCGGATGGCATACCAGCAGCCTGAGCTTGT...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTGCGCAGCTATTGTGCTaGGCAAGGACAAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLAQLLC*ARTSSG
Trigger: GCCTGAGCTTGTCCTTGCCCAGCACAATAGCTGCGC...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGCGCAGCTATTGTGCTaGGCAAGGACAAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCAQLLC*ARTSSG
Trigger: GCCTGAGCTTGTCCTTGCCCAGCACAATAGCTGCGC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGTAAGATCCCTGCGGTaGGTTCTTGTCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCVRSLR*VLVQPA
Trigger: GGCTGGCTGGACAAGAACCCACCGCAGGGATCTTAC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGACTTCTGGTCCCCGATaGCAGCCACGTGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWETSGPR*QPRGRC
Trigger: GCATCTCCCACGTGGCTGCCATCGGGGACCAGAAGT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCATCACTTCAAACTTCTaGTCCCCGATGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAITSNF*SPMAAT
Trigger: CGTGGCTGCCATCGGGGACCAGAAGTTTGAAGTGAT...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCATCACTTCAAACTTCTaGTCCCCGATGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGITSNF*SPMAAT
Trigger: CGTGGCTGCCATCGGGGACCAGAAGTTTGAAGTGAT...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTTGTCCAGCTCCTCCTaGTTGCCAAAGAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCLSSSS*LPKSGW
Trigger: CCACCCGCTCTTTGGCAACCAGGAGGAGCTGGACAA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
CDS-3UTR CCA 90 bp CCCGCTGGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTTTGTCCAGCTCCTCCTaGTTGCCAAAGAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAGSHQALEHKGCLNRRLLSSSS*LPKSGW
Trigger: CCACCCGCTCTTTGGCAACCAGGAGGAGCTGGACAA...AAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGCCCGAATCTCTCCATTaGGGGTCACTGCCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAPESLH*GSLPAH
Trigger: ATGAGCGGGCAGTGACCCCCAATGGAGAGATTCGGG...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGAGGCACACAATCTCGCTaGCCCGAATCTCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRGTQSR*PESLHW
Trigger: CCAATGGAGAGATTCGGGCCAGCGAGATTGTGTGCC...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCGGCACACAATCTCGCTaGCCCGAATCTCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: VSEQKASSGGILEPRMGSGTQSR*PESLHW
Trigger: CCAATGGAGAGATTCGGGCCAGCGAGATTGTGTGCC...GGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGTGTGCTCAAAGCCATaGGTGTCAGGAGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAVCSKP*VSGGGT
Trigger: AGTGCCCCCTCCTGACACCCATGGCTTTGAGCACAC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGTGTGCTCAAAGCCATaGGTGTCAGGAGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCVCSKP*VSGGGT
Trigger: AGTGCCCCCTCCTGACACCCATGGCTTTGAGCACAC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp CACTCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCTTCTCACTGTCCCCCTaGATGGAAAGCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HSAQTGRKAEVPKAQLSAFSLSP*MESSCS
Trigger: ACTGCAGGAGCTTTCCATCCAGGGGGACAGTGAGAA...GGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCAGCCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTTCTCACTGTCCCCCTaGATGGAAAGCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SAQTGRKAEVPKAQLSALFSLSP*MESSCS
Trigger: ACTGCAGGAGCTTTCCATCCAGGGGGACAGTGAGAA...CAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GGGGTGTCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTTCTCACTGTCCCCCTaGATGGAAAGCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GVSEQKASSGGILEPRMGFSLSP*MESSCS
Trigger: ACTGCAGGAGCTTTCCATCCAGGGGGACAGTGAGAA...GCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGACACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGACCAGCACCAGCACCTaGTTCTCACTGTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWETSTST*FSLSPW
Trigger: CCAGGGGGACAGTGAGAACCAGGTGCTGGTGCTGGT...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTTCCTGCCCATCTGTCTaGAAGAGCGTGGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCSCPSV*KSVGPN
Trigger: GTTTGGGCCCACGCTCTTCCAGACAGATGGGCAGGA...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTATGGCCTCCATGGCCTaGTGCTTCTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCMASMA*CFFTTR
Trigger: CCTGGTGGTGAAGAAGCACCAGGCCATGGAGGCCAT...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5
ENST00000429686.5
ENST00000455638.6
CDS-3UTR CCA 90 bp GGCTCACATCAGGCCTTGGAGCATAAGGGGTGTCTGAACAGAAGGCTTCCAGCGGCAGCATGGCCTCCATaGCCTGGTGCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GSHQALEHKGCLNRRLPAAAWPP*PGASSP
Trigger: TGGTGAAGAAGCACCAGGCCATGGAGGCCATGCTGC...CGCTGGAAGCCTTCTGTTCAGACACCCCTTATGCTCCAAGGCCTGATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp GCTGAGTGCTCCTCTACAGCACCCGCTTTCTGCTGTTCTGGAGTTTGTTGGGAGTGTCACCGACACGGCTaGCCAGGTACAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: AECSSTAPAFCCSGVCWECHRHG*PGTAAW
Trigger: CCATGCTGCTGTACCTGGCCAGCCGTGTCGGTGACA...CTCCCAACAAACTCCAGAACAGCAGAAAGCGGGTGCTGTAGAGGAGCACTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp CCCAGACTGGAAGGAAGGCTGAAGTCCCCAAAGCGCAGCTCTCAGCCCTGTAGATCATCATGCCATGCTTaGTGTCACCGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLEGRLKSPKRSSQPCRSSCHA*CHRHGW
Trigger: CCAGCCGTGTCGGTGACACCAAGCATGGCATGATGA...TCTACAGGGCTGAGAGCTGCGCTTTGGGGACTTCAGCCTTCCTTCCAGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000455638.6
CDS-3UTR CCA 90 bp TCTGAACAGAAGGCTTCCAGCGGCGGAATCCTAGAGCCAAGGATGGGCTCCTGTGCCCCAGCAGGTGGGTaGCCTGAGTTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SEQKASSGGILEPRMGSCAPAGG*PEFLLH
Trigger: GTGAAGAAGAAACTCAGGCCACCCACCTGCTGGGGC...ACAGGAGCCCATCCTTGGCTCTAGGATTCCGCCGCTGGAAGCCTTCTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334211.12
ENST00000359373.9
ENST00000393605.7
ENST00000393609.8
ENST00000426523.5