Pregenerated sensors for ARAF (Homo sapiens)
Ensembl gene IDs: ENSG00000078061Ensembl transcript IDs: ENST00000377039.2, ENST00000377045.9, ENST00000469505.1, ENST00000489496.1
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCTCCCAGGGTGGGGAATaGGGGATCCTGAGGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSSQGGE*GILRQH Trigger: ATGCTGCCTCAGGATCCCCCATTCCCCACCCTGGGA...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTGGCAGAGACGAACATTaGTTGGCTGGTGGGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PCHKSQPLEMEELPKFRSGRDEH*LAGGQG Trigger: GCCTTGCCCACCAGCCAATCAATGTTCGTCTCTGCC...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| 3UTR-3UTR TCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTCCCAGAGAAATGAGGTaGCTTGCCCAAGGTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTPREMR*LAQGPS Trigger: ACTGGGACCTTGGGCAAGTCACCTCATTTCTCTGGG...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| 3UTR-3UTR GCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTAGAAATGAGGTGACTTaGCCAAGGTCCCAGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTRNEVT*PRSQFH Trigger: ATGAAACTGGGACCTTGGGCAAGTCACCTCATTTCT...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTATAAAGTATGGCTCGTaGTCTACAAGAGCCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTIKYGS*STRAPR Trigger: TCTTGGGGCTCTTGTAGACCACGAGCCATACTTTAT...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTCAAATGAATAAAGTATaGCTCGTGGTCTACAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTQMNKV*LVVYKS Trigger: GCTCTTGTAGACCACGAGCCATACTTTATTCATTTG...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTATGTCAAGTAAACAAATaGATAAAGTATGGCTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: FKPHQNLYMVESIIIPSLCQVNK*IKYGSW Trigger: CCACGAGCCATACTTTATTCATTTGTTTACTTGACA...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTGGGCAGAGACGAACATaGATTGGCTGGTGGGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: WNPCHKSQPLEMEELPKFGQRRT*IGWWAR Trigger: CCTTGCCCACCAGCCAATCAATGTTCGTCTCTGCCC...AAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| 3UTR CCA 72 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATaGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SGIPATNPSHWR*RSSQNLEVSPK Trigger: CTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| 3UTR TCA 72 bp | GATTATTTACACTGTACCAGATCCTGTTCTAGGCACTaGACATGTCTTAACTCATTTAAGCCTCACCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: DYLHCTRSCSRH*TCLNSFKPHQN Trigger: GTTCTGGTGAGGCTTAAATGAGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCTCCCCGAGGACACGCTaGCTGGGCTGGGGCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPSPRTR*LGWGSP Trigger: GGGGGAGCCCCAGCCCAGCCAGCGTGTCCTCGGGGA...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCGTGGGGCTGGGCAGGTaGCATGGGGCTCCTGTCACG | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPVGLGR*HGAPVT Trigger: CGTGACAGGAGCCCCATGGCACCTGCCCAGCCCCAC...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCGCTGGGCAGGTGCCATaGGGCTCCTGTCACGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSAGQVP*GSCHAA Trigger: AGCGGCGTGACAGGAGCCCCATGGCACCTGCCCAGC...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCAGATTGGCTCCCTGGTaGCTTGGGCGGGGCCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPRLAPW*LGRGLR Trigger: CCTTAGGCCCCGCCCAAGCCACCAGGGAGCCAATCT...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCCTGAGATTGGCTCCCTaGTGGCTTGGGCGGGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPLRLAP*WLGRGL Trigger: TAGGCCCCGCCCAAGCCACCAGGGAGCCAATCTCAG...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCTGGGGGCCGTGGTGCTaGCCATATGGACGTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSWGPWC*PYGRWE Trigger: CTCCCAACGTCCATATGGTCAGCACCACGGCCCCCA...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCACAGCACAGATCCTaGGGGCTGCTCCAAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSPQHRS*GLLQGL Trigger: CAGCCCTTGGAGCAGCCCTCAGGATCTGTGCTGTGG...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCGGACAGTCACCACCGTaGGTTGCTTGTTGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPGQSPP*VACWAG Trigger: ACCTGCCCAACAAGCAACGCACGGTGGTGACTGTCC...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCGCAGGGAAGGGGAAGTaGTCCGGGTCACAGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSAGKGK*SGSQCW Trigger: CCAGCACTGTGACCCGGAGCACTTCCCCTTCCCTGC...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATGGGCTGAGGTGGGGCTaGGCAGGTGCCATGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNGLRWG*AGAMGL Trigger: GAGCCCCATGGCACCTGCCCAGCCCCACCTCAGCCC...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATGCCCACTGCCCGGGATaGCTCGGCCCCATTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNAHCPG*LGPIGR Trigger: CCTGCCAATGGGGCCGAGCCATCCCGGGCAGTGGGC...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTCCGGGTCACAGTGCTaGGTGCGGGGGCTGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNSGSQC*VRGLGP Trigger: GGGTCCCAGCCCCCGCACCCAGCACTGTGACCCGGA...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCGCCACGTCGATGAGCTaGACCATGTCGAAGCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPATSMS*TMSKRV Trigger: CACACGCTTCGACATGGTCCAGCTCATCGACGTGGC...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGACGGCCACATCGCCATaGCACCGCCCTCGAAACACG | + |
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Preference number: 4 (lower is better) Translates to: KPRGNQMMEETGGSVFGGTATSP*HRPRNT Trigger: CGTGTTTCGAGGGCGGTGGCATGGCGATGTGGCCGT...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCCTGCACCTCACTGGGTaGTACCTCCCAGTAATAGCC | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPLHLTG*YLPVIA Trigger: GGCTATTACTGGGAGGTACCACCCAGTGAGGTGCAG...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCTCATTCTTGAAAGCCTaGGCCTGCTCAGCTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPSFLKA*ACSAVG Trigger: GCCCACAGCTGAGCAGGCCCAGGCTTTCAAGAATGA...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCGCGCTGCTCTGCTGGTaGCTTGGAATGTGGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSALLCW*LGMWGL Trigger: AAGTCCCCACATTCCAAGTCACCAGCAGAGCAGCGC...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCTCCCAGTAATAGCCTaGGTCCCGGTACCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSLPVIA*VPVPQV Trigger: AACCTGGGGTACCGGGACTCAGGCTATTACTGGGAG...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGTTCGAGGGAGCCTCATaGTGTCTGGAGCCTCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: KPRGNQMMEETGGSVFGGFEGAS*CLEPPD Trigger: GTCCGGAGGCTCCAGACAGCATGAGGCTCCCTCGAA...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTGGGCAGGTATACTTTaGCGGTGCCCACTGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNWAGIL*RCPLPG Trigger: CCCGGGCAGTGGGCACCGTCAAAGTATACCTGCCCA...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTGCCGGGCCACGTCGATaGGCTGGACCATGTCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PCHKSQPLEMEELPKFRSAGPRR*AGPCRS Trigger: GCTTCGACATGGTCCAGCTCATCGACGTGGCCCGGC...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTCAAGGCGGGCTGCGCTaGGTAGGCAGGCAGGCAACT | + |
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Preference number: 4 (lower is better) Translates to: PCHKSQPLEMEELPKFRSQGGLR*VGRQAT Trigger: AGTTGCCTGCCTGCCTACTCAGCGCAGCCCGCCTTG...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGACTTCCGCTCGCGCTaGTCTGCTGGTGACTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KPRGNQMMEETGGSVFGGDFRSR*SAGDLE Trigger: TTCCAAGTCACCAGCAGAGCAGCGCGAGCGGAAGTC...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCATCCTCTTCAGCAGCTaGACCTCACTGGGTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSILFSS*TSLGGT Trigger: GGTACCACCCAGTGAGGTGCAGCTGCTGAAGAGGAT...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | TGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTTCGGCCTGGGTGCGGTaGAAGGAGGGTTCCGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: WNPCHKSQPLEMEELPKFSAWVR*KEGSEA Trigger: TGCCTCGGAACCCTCCTTGCACCGCACCCAGGCCGA...AAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTGGCTCCCTGGTGGCTTaGGCGGGGCCTAAGGCACAA | + |
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Preference number: 4 (lower is better) Translates to: PCHKSQPLEMEELPKFRSGSLVA*AGPKAQ Trigger: TTGTGCCTTAGGCCCCGCCCAAGCCACCAGGGAGCC...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCAGTCGTAGACACTCATaGCATCCCGGACAGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSSRRHS*HPGQSP Trigger: TGGTGACTGTCCGGGATGGCATGAGTGTCTACGACT...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTGCCCTCGAAACACGGTaGCAAACGAGCCCGTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: PCHKSQPLEMEELPKFRSALETR*QTSPSR Trigger: TCGGGACGGGCTCGTTTGGCACCGTGTTTCGAGGGC...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTACTCATCGGCCTGGGTaGGGTGCAAGGAGGGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PCHKSQPLEMEELPKFRSTHRPG*GARRVP Trigger: CGGAACCCTCCTTGCACCGCACCCAGGCCGATGAGT...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCAGACTGTGGGGACCTTaGAGGAACAATGCTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSRLWGP*RNNAGG Trigger: TCCACCAGCATTGTTCCTCCAAGGTCCCCACAGTCT...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | TGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTCGTTGGGAGTGGACGTaGAGCGGATGCGCTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: WNPCHKSQPLEMEELPKFRWEWT*SGCAVG Trigger: CCCTACAGCGCATCCGCTCCACGTCCACTCCCAACG...AAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCTCAGTGCTGAAACTCTaGCCAGTGAGCTGGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSSVLKL*PVSWMR Trigger: CCTCATCCAGCTCACTGGCCAGAGTTTCAGCACTGA...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCCCCAGCCATTGGAGATaGAGGAGCTCCCAAAATTTA | + |
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Preference number: 4 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPPSHWR*RSSQNL Trigger: TAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGG...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 56% GC, longest homopolymer 8 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGCACAGAACGCCAGGCTaGAGAAGGTCTTCCGTACAA | + |
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Preference number: 4 (lower is better) Translates to: KPRGNQMMEETGGSVFGGHRTPG*RRSSVQ Trigger: TTGTACGGAAGACCTTCTTCAGCCTGGCGTTCTGTG...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATGGCAGAGACGAACATTaGTTGGCTGGTGGGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNGRDEH*LAGGQG Trigger: GCCTTGCCCACCAGCCAATCAATGTTCGTCTCTGCC...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAATGCTCCGGGTCACAGTaGTGGGTGCGGGGGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LEMEELPKFRSIPKAKRKCSGSQ*WVRGLG Trigger: TCCCAGCCCCCGCACCCAGCACTGTGACCCGGAGCA...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | CCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGCGGGGGCTGGGACCCTaGGGGGTTAGCAACTCATTC | + |
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Preference number: 4 (lower is better) Translates to: PLEMEELPKFRSIPKAKRRGLGP*GVSNSF Trigger: GAATGAGTTGCTAACCCCCCAGGGTCCCAGCCCCCG...CCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTATGGACGTTGGGAGTaGACGTGGAGCGGATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNYGRWE*TWSGCA Trigger: AGCGCATCCGCTCCACGTCCACTCCCAACGTCCATA...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | CCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGATTGTGGCCAGGATCTaGGGGAAGAGGGGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLEMEELPKFRSIPKAKRIVARI*GKRGRS Trigger: GGAGCGGCCCCTCTTCCCCCAGATCCTGGCCACAAT...CCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | TGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTTCCCAGGGTGGGGAATaGGGGATCCTGAGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WNPCHKSQPLEMEELPKFSQGGE*GILRQH Trigger: ATGCTGCCTCAGGATCCCCCATTCCCCACCCTGGGA...AAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGAGAGGAGTCCTTGAATaGCGGGGGAGACACAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRGNQMMEETGGSVFGGRGVLE*RGRHKR Trigger: CCTTTTGTGTCTCCCCCGCCATTCAAGGACTCCTCT...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATCACCGATCTTCACCGTaGGCCCCTCATGTAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNHRSSP*APHVGR Trigger: TCTTCCTACATGAGGGGCTCACGGTGAAGATCGGTG...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | GAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATTTTGACGGTGCCCACTaGCCGGGATGGCTCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EELPKFRSIPKAKRKPNDFDGAH*PGWLGP Trigger: GGGGCCGAGCCATCCCGGGCAGTGGGCACCGTCAAA...ATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCGTCTTCCTGAGCACCTaGATCTCATTCTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSVFLST*ISFLKA Trigger: GGCTTTCAAGAATGAGATGCAGGTGCTCAGGAAGAC...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATGAGCCTCATGCTGTCTaGAGCCTCCGGACAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNEPHAV*SLRTNP Trigger: AGGATTTGTCCGGAGGCTCCAGACAGCATGAGGCTC...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | TGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTCCTGCATCTCATTCTTaGAAGCCTGGGCCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WNPCHKSQPLEMEELPKFPASHS*KPGPAQ Trigger: CTGAGCAGGCCCAGGCTTTCAAGAATGAGATGCAGG...AAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGTGTCAACACAGACTGTaGGGACCTTGGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KPRGNQMMEETGGSVFGGCQHRL*GPWRNN Trigger: ATTGTTCCTCCAAGGTCCCCACAGTCTGTGTTGACA...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTGCTCTGCTGGTGACTTaGAATGTGGGGACTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCHKSQPLEMEELPKFRSALLVT*NVGTSS Trigger: GGAGGAAGTCCCCACATTCCAAGTCACCAGCAGAGC...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTGCAGCTGCACCTCACTaGGTGGTACCTCCCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PCHKSQPLEMEELPKFRSAAAPH*VVPPSN Trigger: ATTACTGGGAGGTACCACCCAGTGAGGTGCAGCTGC...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | GTTCTAGGCACTGAACATGTCTTAACTCATTTAAGCCTCACCAGAACCTTTATAGTGGGGCTGGGCAGGTaGCATGGGGCTCCTGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEHVLTHLSLTRTFIVGLGR*HGAPVT Trigger: CGTGACAGGAGCCCCATGGCACCTGCCCAGCCCCAC...TATAAAGGTTCTGGTGAGGCTTAAATGAGTTAAGACATGTTCAGTGCCTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTGGGCTGAGGTGGGGCTaGGCAGGTGCCATGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTGLRWG*AGAMGL Trigger: GAGCCCCATGGCACCTGCCCAGCCCCACCTCAGCCC...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTGCCCACTGCCCGGGATaGCTCGGCCCCATTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTAHCPG*LGPIGR Trigger: CCTGCCAATGGGGCCGAGCCATCCCGGGCAGTGGGC...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGAGAACTGTTGGCGGTTaGTACTCATGTCAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPRGNQMMEETGGSVFGGRTVGG*YSCQHR Trigger: TCTGTGTTGACATGAGTACCAACCGCCAACAGTTCT...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | GAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATGGCAACTCATCGGCCTaGGTGCGGTGCAAGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EELPKFRSIPKAKRKPNDGNSSA*VRCKEG Trigger: ACCCTCCTTGCACCGCACCCAGGCCGATGAGTTGCC...ATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | GAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATTGGGCTGGGACACCTTaGGCACCTTCACGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: EELPKFRSIPKAKRKPNDWAGTP*APSRPH Trigger: ATGTGGCCGTGAAGGTGCTCAAGGTGTCCCAGCCCA...ATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | CCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGCAAGAGGAAACCAAATaGTGGAGGAGACAGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLEMEELPKFRSIPKAKRQEETK*WRRQGA Trigger: AGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTG...CCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTATTTGACGGTGCCCACTaGCCGGGATGGCTCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLFDGAH*PGWLGP Trigger: GGGGCCGAGCCATCCCGGGCAGTGGGCACCGTCAAA...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTGCTGGGCAGGTGCCATaGGGCTCCTGTCACGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTAGQVP*GSCHAA Trigger: AGCGGCGTGACAGGAGCCCCATGGCACCTGCCCAGC...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTGGCAACGGAAGCCATaGAACAGAAACTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNWQRKP*NRNLRQ Trigger: CTGCCTTAAGTTTCTGTTCCATGGCTTCCGTTGCCA...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAAACCACACAGCAGTCCTaGTTTAGACCCCGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEMEELPKFRSIPKAKRKTTQQS*FRPRTF Trigger: GAAGGTGCGGGGTCTAAATCAGGACTGCTGTGTGGT...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTCCGTACAAAATTGTaGATGGTCAGCGGGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNFRTKL*MVSGTS Trigger: AGATGTCCCGCTGACCATGCACAATTTTGTACGGAA...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACTCTGGCCAGTGAGCTaGATGAGGTTGGAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LEMEELPKFRSIPKAKRKLWPVS*MRLESM Trigger: CATGGACTCCAACCTCATCCAGCTCACTGGCCAGAG...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACACTCCGCTCAATCTTaGGGAGTGACCGTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEMEELPKFRSIPKAKRKHSAQS*GVTVAA Trigger: TGCTGCAACGGTCACTCCCCAAGATTGAGCGGAGTG...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | CCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGACAAATCCCAGCCATTaGAGATGGAGGAGCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLEMEELPKFRSIPKAKRTNPSH*RWRSSQ Trigger: TTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGT...CCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTATGGGCAGGTATACTTTaGCGGTGCCCACTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLWAGIL*RCPLPG Trigger: CCCGGGCAGTGGGCACCGTCAAAGTATACCTGCCCA...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR TCA 90 bp | GTTCTAGGCACTGAACATGTCTTAACTCATTTAAGCCTCACCAGAACCTTTATACAAGGACCTCGACAATaGGCTCCTCGCCATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEHVLTHLSLTRTFIQGPRQ*APRHPG Trigger: CCCTGGATGGCGAGGAGCTCATTGTCGAGGTCCTTG...TATAAAGGTTCTGGTGAGGCTTAAATGAGTTAAGACATGTTCAGTGCCTAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR TCA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACATGTCGCGTCTTCCTaGGCACCTGCATCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEMEELPKFRSIPKAKRKHVASS*APASHS Trigger: AGAATGAGATGCAGGTGCTCAGGAAGACGCGACATG...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAAGTGGCTGTAAGGCAGTaGGCCAGTCATAAGCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEMEELPKFRSIPKAKRKVAVRQ*ASHKLV Trigger: TACGAGCTTATGACTGGCTCACTGCCTTACAGCCAC...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR TCA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAAAAAGAGAGGAGTCCTTaGATGGCGGGGGAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LEMEELPKFRSIPKAKRKKERSP*MAGETQ Trigger: TTGTGTCTCCCCCGCCATTCAAGGACTCCTCTCTTT...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | GAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATTTGGGGAGTGACCGTTaGAGCAGCTCAATTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EELPKFRSIPKAKRKPNDLGSDR*SSSIVA Trigger: GGCCACAATTGAGCTGCTGCAACGGTCACTCCCCAA...ATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTCCCAGCAGAATTCTGTaGTTCTTGGTGAAGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCHKSQPLEMEELPKFRSPSRIL*FLVKKE Trigger: CTCTTTCTTCACCAAGAAGCACAGAATTCTGCTGGG...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATGTACAAAATTGTGCATaGTCAGCGGGACATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGIPATNPSHWRWRSSQNVQNCA*SAGHLQ Trigger: TTGAAGATGTCCCGCTGACCATGCACAATTTTGTAC...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTATTCGAGGGAGCCTCATaGTGTCTGGAGCCTCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLFEGAS*CLEPPD Trigger: GTCCGGAGGCTCCAGACAGCATGAGGCTCCCTCGAA...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR TCA 90 bp | GTTCTAGGCACTGAACATGTCTTAACTCATTTAAGCCTCACCAGAACCTTTATAACCACACAGCAGTCCTaGTTTAGACCCCGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEHVLTHLSLTRTFITTQQS*FRPRTF Trigger: GAAGGTGCGGGGTCTAAATCAGGACTGCTGTGTGGT...TATAAAGGTTCTGGTGAGGCTTAAATGAGTTAAGACATGTTCAGTGCCTAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR GCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTAGGACAGTCACCACCGTaGGTTGCTTGTTGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLGQSPP*VACWAG Trigger: ACCTGCCCAACAAGCAACGCACGGTGGTGACTGTCC...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATTCTGAGTGGAATCCCTaGCACAAATCCCAGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EELPKFRSIPKAKRKPNDSEWNP*HKSQPL Trigger: CAATGGCTGGGATTTGTGGCAGGGATTCCACTCAGA...ATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTCCCTACCTGGGACCCTaGGGGGTTAGCAACTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTPYLGP*GVSNSF Trigger: GAATGAGTTGCTAACCCCCCAGGGTCCCAGGTAGGG...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR TCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTACCCAGAGAAATGAGGTaGCTTGCCCAAGGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLPREMR*LAQGPS Trigger: ACTGGGACCTTGGGCAAGTCACCTCATTTCTCTGGG...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR GCA 90 bp | GTTCTAGGCACTGAACATGTCTTAACTCATTTAAGCCTCACCAGAACCTTTATAGTCACCACCGTGCGTTaGTTGTTGGGCAGGTATACT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEHVLTHLSLTRTFIVTTVR*LLGRYT Trigger: AGTATACCTGCCCAACAAGCAACGCACGGTGGTGAC...TATAAAGGTTCTGGTGAGGCTTAAATGAGTTAAGACATGTTCAGTGCCTAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTGAGCCTCATGCTGTCTaGAGCCTCCGGACAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTEPHAV*SLRTNP Trigger: AGGATTTGTCCGGAGGCTCCAGACAGCATGAGGCTC...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR TCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTACACAGAACGCCAGGCTaGAGAAGGTCTTCCGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLHRTPG*RRSSVQ Trigger: TTGTACGGAAGACCTTCTTCAGCCTGGCGTTCTGTG...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATTTCTGTGCTTCTTGGTaGAGAAAGAGAGGAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EELPKFRSIPKAKRKPNDFCASW*RKRGVL Trigger: AAGGACTCCTCTCTTTCTTCACCAAGAAGCACAGAA...ATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR GCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTAAGTCGTAGACACTCATaGCATCCCGGACAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLSRRHS*HPGQSP Trigger: TGGTGACTGTCCGGGATGGCATGAGTGTCTACGACT...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTAAGACTGTGGGGACCTTaGAGGAACAATGCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLRLWGP*RNNAGG Trigger: TCCACCAGCATTGTTCCTCCAAGGTCCCCACAGTCT...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTACCCGTGGTGGCTCCATaGAGCCTTAGATTTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLPVVAP*SLRFCQ Trigger: TTGACAAAATCTAAGGCTCCATGGAGCCACCACGGG...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTTGGCAACGGAAGCCATaGAACAGAAACTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTWQRKP*NRNLRQ Trigger: CTGCCTTAAGTTTCTGTTCCATGGCTTCCGTTGCCA...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTTGTCAACACAGACTGTaGGGACCTTGGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTCQHRL*GPWRNN Trigger: ATTGTTCCTCCAAGGTCCCCACAGTCTGTGTTGACA...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR GCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTTTCCGTACAAAATTGTaGATGGTCAGCGGGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTFRTKL*MVSGTS Trigger: AGATGTCCCGCTGACCATGCACAATTTTGTACGGAA...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR GCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTAAGAAATGAGGTGACTTaGCCAAGGTCCCAGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLRNEVT*PRSQFH Trigger: ATGAAACTGGGACCTTGGGCAAGTCACCTCATTTCT...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTAAGAACTGTTGGCGGTTaGTACTCATGTCAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLRTVGG*YSCQHR Trigger: TCTGTGTTGACATGAGTACCAACCGCCAACAGTTCT...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTAATAAAGTATGGCTCGTaGTCTACAAGAGCCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLIKYGS*STRAPR Trigger: TCTTGGGGCTCTTGTAGACCACGAGCCATACTTTAT...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTGTACAAAATTGTGCATaGTCAGCGGGACATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTVQNCA*SAGHLQ Trigger: TTGAAGATGTCCCGCTGACCATGCACAATTTTGTAC...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR TCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTATCCTGTTCTAGGCACTaGACATGTCTTAACTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLSCSRH*TCLNSF Trigger: AAATGAGTTAAGACATGTTCAGTGCCTAGAACAGGA...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTACAAATGAATAAAGTATaGCTCGTGGTCTACAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKPHQNLYMVESIIIPSLQMNKV*LVVYKS Trigger: GCTCTTGTAGACCACGAGCCATACTTTATTCATTTG...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS GCA 90 bp | GCACCTTCACGGCCACATCGCCATGCCACCGCCCTCGAAACACGGTaGCAAACGAGCCCGTCCCGATCCTCTTCAGCAGCTGCACCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: APSRPHRHATALETR*QTSPSRSSSAAAPH Trigger: GTGAGGTGCAGCTGCTGAAGAGGATCGGGACGGGCTCGTTTGGCACCGTGTTTCGAGGGCGGTGGCATGGCGATGTGGCCGTGAAGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS CCA 90 bp | TGTCATCGGCCAAGGACTTCCGCTCGCGCTGCTCTGCTGGTGACTTaGAATGTGGGGACTTCCTCCCCGAGGACACGCTGGCTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CHRPRTSARAALLVT*NVGTSSPRTRWLGW Trigger: CCAGCCCAGCCAGCGTGTCCTCGGGGAGGAAGTCCCCACATTCCAAGTCACCAGCAGAGCAGCGCGAGCGGAAGTCCTTGGCCGATGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS TCA 90 bp | CTTCTTGTCATCGGCCAAGGACTTCCGCTCGCGCTGCTCTGCTGGTaGCTTGGAATGTGGGGACTTCCTCCCCGAGGACACGCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLVIGQGLPLALLCW*LGMWGLPPRGHAGW Trigger: CCAGCCAGCGTGTCCTCGGGGAGGAAGTCCCCACATTCCAAGTCACCAGCAGAGCAGCGCGAGCGGAAGTCCTTGGCCGATGACAAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS CCA 90 bp | TGCCAAACGAGCCCGTCCCGATCCTCTTCAGCAGCTGCACCTCACTaGGTGGTACCTCCCAGTAATAGCCTGAGTCCCGGTACCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CQTSPSRSSSAAAPH*VVPPSNSLSPGTPG Trigger: ACCTGGGGTACCGGGACTCAGGCTATTACTGGGAGGTACCACCCAGTGAGGTGCAGCTGCTGAAGAGGATCGGGACGGGCTCGTTTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS CCA 90 bp | ACCTGCATCTCATTCTTGAAAGCCTGGGCCTGCTCAGCTGTGGGCTaGGACACCTTGAGCACCTTCACGGCCACATCGCCATGCCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: TCISFLKAWACSAVG*DTLSTFTATSPCHR Trigger: GCGGTGGCATGGCGATGTGGCCGTGAAGGTGCTCAAGGTGTCCCAGCCCACAGCTGAGCAGGCCCAGGCTTTCAAGAATGAGATGCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCGGGCAGAGACGAACATaGATTGGCTGGTGGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPGQRRT*IGWWAR Trigger: CCTTGCCCACCAGCCAATCAATGTTCGTCTCTGCCC...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCACCTGCATCTCATTCTaGAAAGCCTGGGCCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPTCISF*KAWACS Trigger: TGAGCAGGCCCAGGCTTTCAAGAATGAGATGCAGGT...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS GCA 90 bp | TTCTTCACTTTCTTCTTGTCATCGGCCAAGGACTTCCGCTCGCGCTaGTCTGCTGGTGACTTGGAATGTGGGGACTTCCTCCCCGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FFTFFLSSAKDFRSR*SAGDLECGDFLPED Trigger: GTCCTCGGGGAGGAAGTCCCCACATTCCAAGTCACCAGCAGAGCAGCGCGAGCGGAAGTCCTTGGCCGATGACAAGAAGAAAGTGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS CCA 90 bp | TTAGCAACTCATTCAGGGGGCGGTTCGAGGGAGCCTCATGCTGTCTaGAGCCTCCGGACAAATCCTGGACACTGTGGTAGAACTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LATHSGGGSREPHAV*SLRTNPGHCGRTVG Trigger: GCCAACAGTTCTACCACAGTGTCCAGGATTTGTCCGGAGGCTCCAGACAGCATGAGGCTCCCTCGAACCGCCCCCTGAATGAGTTGCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377039.2 ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCGTCTTCCGTACAAAATaGTGCATGGTCAGCGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPVFRTK*CMVSGT Trigger: TGTCCCGCTGACCATGCACAATTTTGTACGGAAGAC...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCACAAATCCCAGCCATaGGAGATGGAGGAGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRKPNDGGDRGLSLWRGSHKSQP*EMEELP Trigger: TGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTG...GGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS TCA 90 bp | CTTCAGCAGCTGCACCTCACTGGGTGGTACCTCCCAGTAATAGCCTaGGTCCCGGTACCCCAGGTTCTTCACTTTCTTCTTGTCATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQQLHLTGWYLPVIA*VPVPQVLHFLLVIG Trigger: GCCGATGACAAGAAGAAAGTGAAGAACCTGGGGTACCGGGACTCAGGCTATTACTGGGAGGTACCACCCAGTGAGGTGCAGCTGCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGAAAGAGAGGAGTCCTaGAATGGCGGGGGAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: KPRGNQMMEETGGSVFGGEREES*NGGGDT Trigger: TGTGTCTCCCCCGCCATTCAAGGACTCCTCTCTTTC...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | CCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGGTGAGCTGGATGAGGTaGGAGTCCATGGGGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLEMEELPKFRSIPKAKRVSWMR*ESMGAV Trigger: CACGGCCCCCATGGACTCCAACCTCATCCAGCTCAC...CCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | AGTGGAATCCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATGTTGCAGCAGCTCAATaGTGGCCAGGATCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGIPATNPSHWRWRSSQNVAAAQ*WPGSGG Trigger: TCCCCCAGATCCTGGCCACAATTGAGCTGCTGCAAC...ATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGGATTCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | CCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGTTGGGCAGGTATACTTaGACGGTGCCCACTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLEMEELPKFRSIPKAKRLGRYT*TVPTAR Trigger: CCGGGCAGTGGGCACCGTCAAAGTATACCTGCCCAA...CCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | AGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGGGTCCCCCTCATGTAGGAAGATGTaGTTAGACTTGAGATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RKPNDGGDRGLSLWRGSPSCRKM*LDLRSR Trigger: CCGAGATCTCAAGTCTAACAACATCTTCCTACATGA...GGGGGACCCCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAAGTGGGCTGGGACACCTaGAGCACCTTCACGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LEMEELPKFRSIPKAKRKVGWDT*STFTAT Trigger: TGTGGCCGTGAAGGTGCTCAAGGTGTCCCAGCCCAC...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACTGACCATATGGACGTaGGGAGTGGACGTGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LEMEELPKFRSIPKAKRKLTIWT*GVDVER Trigger: CCGCTCCACGTCCACTCCCAACGTCCATATGGTCAG...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | AAGCCAAGAGGAAACCAAATGATGGAGGAGACAGGGGGCTCAGTCTTTGGCGGGTTCTTCACTTTCTTCTaGTCATCGGCCAAGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPRGNQMMEETGGSVFGGFFTFF*SSAKDF Trigger: GAAGTCCTTGGCCGATGACAAGAAGAAAGTGAAGAA...CCCGCCAAAGACTGAGCCCCCTGTCTCCTCCATCATTTGGTTTCCTCTTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | CCCTGCCACAAATCCCAGCCATTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATAAACAGCAAGATGTaGACATGTCGCGTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PCHKSQPLEMEELPKFRSINSKM*TCRVFL Trigger: CAGGAAGACGCGACATGTCAACATCTTGCTGTTTAT...ACTTCTAAATTTTGGGAGCTCCTCCATCTCCAATGGCTGGGATTTGTGGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTTTGGGCAGGTATACTTaGACGGTGCCCACTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTLGRYT*TVPTAR Trigger: CCGGGCAGTGGGCACCGTCAAAGTATACCTGCCCAA...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAACCAAATGATACCGTGCGTTGCTTGTaGGGCAGGTATACTTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: EELPKFRSIPKAKRKPNDTVRCL*GRYTLT Trigger: CGTCAAAGTATACCTGCCCAACAAGCAACGCACGGT...ATCATTTGGTTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | TTGGAGATGGAGGAGCTCCCAAAATTTAGAAGTATCCCCAAAGCCAAGAGGAAAACTGTGGTAGAACTGTaGGCGGTTGGTACTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEMEELPKFRSIPKAKRKTVVEL*AVGTHV Trigger: GACATGAGTACCAACCGCCAACAGTTCTACCACAGT...TTTCCTCTTGGCTTTGGGGATACTTCTAAATTTTGGGAGCTCCTCCATCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS-3UTR CAA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTAACCGTGCGTTGCTTGTaGGGCAGGTATACTTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: FKPHQNLYMVESIIIPSLTVRCL*GRYTLT Trigger: CGTCAAAGTATACCTGCCCAACAAGCAACGCACGGT...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CAA 90 bp | TTGATTATTTACACTGTACCAGATCCTGTTCTAGGCACTGAACATGTCTTAACTACCACCGTGCGTTGCTaGTTGGGCAGGTATACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIIYTVPDPVLGTEHVLTTTVRC*LGRYTL Trigger: CAAAGTATACCTGCCCAACAAGCAACGCACGGTGGT...AGTTAAGACATGTTCAGTGCCTAGAACAGGATCTGGTACAGTGTAAATAATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CAA 90 bp | GTTCTAGGCACTGAACATGTCTTAACTCATTTAAGCCTCACCAGAACCTTTATAGTCTTCCGTACAAAATaGTGCATGGTCAGCGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VLGTEHVLTHLSLTRTFIVFRTK*CMVSGT Trigger: TGTCCCGCTGACCATGCACAATTTTGTACGGAAGAC...TATAAAGGTTCTGGTGAGGCTTAAATGAGTTAAGACATGTTCAGTGCCTAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS-3UTR CAA 90 bp | TTTAAGCCTCACCAGAACCTTTATATGGTAGAAAGTATCATCATCCCCTCTTTAACTGTGGTAGAACTGTaGGCGGTTGGTACTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: FKPHQNLYMVESIIIPSLTVVEL*AVGTHV Trigger: GACATGAGTACCAACCGCCAACAGTTCTACCACAGT...TAAAGAGGGGATGATGATACTTTCTACCATATAAAGGTTCTGGTGAGGCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS GCA 72 bp | CGGCCACATCGCCATGCCACCGCCCTCGAAACACGGTaGCAAACGAGCCCGTCCCGATCCTCTTCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPHRHATALETR*QTSPSRSSSAA Trigger: AGCTGCTGAAGAGGATCGGGACGGGCTCGTTTGGCACCGTGTTTCGAGGGCGGTGGCATGGCGATGTGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS GCA 72 bp | TGGGACACCTTGAGCACCTTCACGGCCACATCGCCATaGCACCGCCCTCGAAACACGGTGCCAAACGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WDTLSTFTATSP*HRPRNTVPNEP Trigger: GGGCTCGTTTGGCACCGTGTTTCGAGGGCGGTGGCATGGCGATGTGGCCGTGAAGGTGCTCAAGGTGTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS CCA 72 bp | GGGGATCCCTCAGCCCAGGGAACTGTGGGTAAGGTGTaGGGCTCACCTGGTCACGGCAGCCAATGTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GDPSAQGTVGKV*GSPGHGSQCGC Trigger: ACAGCCACATTGGCTGCCGTGACCAGGTGAGCCCCACACCTTACCCACAGTTCCCTGGGCTGAGGGATCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469505.1 |
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| CDS CAA 90 bp | TTGTCATCGGCCAAGGACTTCCGCTCGCGCTGCTCTGCTGGTGACTaGGAATGTGGGGACTTCCTCCCCGAGGACACGCTGGCTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSAKDFRSRCSAGD*ECGDFLPEDTLAGL Trigger: CAGCCCAGCCAGCGTGTCCTCGGGGAGGAAGTCCCCACATTCCAAGTCACCAGCAGAGCAGCGCGAGCGGAAGTCCTTGGCCGATGACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS TCA 72 bp | ATCGGCCAAGGACTTCCGCTCGCGCTGCTCTGCTGGTaGCTTGGAATGTGGGGACTTCCTCCCCGAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: IGQGLPLALLCW*LGMWGLPPRGH Trigger: GTGTCCTCGGGGAGGAAGTCCCCACATTCCAAGTCACCAGCAGAGCAGCGCGAGCGGAAGTCCTTGGCCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS CCA 72 bp | AGCCCGTCCCGATCCTCTTCAGCAGCTGCACCTCACTaGGTGGTACCTCCCAGTAATAGCCTGAGTCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPSRSSSAAAPH*VVPPSNSLSPG Trigger: ACCGGGACTCAGGCTATTACTGGGAGGTACCACCCAGTGAGGTGCAGCTGCTGAAGAGGATCGGGACGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS CCA 72 bp | GCAGCTCTTCAGCTAAGGCATCCCTACCTGGGACCCTaGGGGGTTAGCAACTCATTCAGGGGGCGGTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AALQLRHPYLGP*GVSNSFRGRFE Trigger: CTCGAACCGCCCCCTGAATGAGTTGCTAACCCCCCAGGGTCCCAGGTAGGGATGCCTTAGCTGAAGAGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377039.2 |
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| CDS CAA 72 bp | ATGCCATCCCGGACAGTCACCACCGTGCGTTGCTTGTaGGGCAGGTATACTTTGACGGTGCCCACTGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: MPSRTVTTVRCL*GRYTLTVPTAR Trigger: CCGGGCAGTGGGCACCGTCAAAGTATACCTGCCCAACAAGCAACGCACGGTGGTGACTGTCCGGGATGGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377039.2 ENST00000377045.9 |
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| CDS CCA 72 bp | CATTCAGGGGGCGGTTCGAGGGAGCCTCATGCTGTCTaGAGCCTCCGGACAAATCCTGGACACTGTGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HSGGGSREPHAV*SLRTNPGHCGR Trigger: TCTACCACAGTGTCCAGGATTTGTCCGGAGGCTCCAGACAGCATGAGGCTCCCTCGAACCGCCCCCTGAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377039.2 ENST00000377045.9 |
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| CDS CAA 72 bp | CTCATGCCATCCCGGACAGTCACCACCGTGCGTTGCTaGTTGGGCAGGTATACTTTGACGGTGCCCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: LMPSRTVTTVRC*LGRYTLTVPTA Trigger: GGCAGTGGGCACCGTCAAAGTATACCTGCCCAACAAGCAACGCACGGTGGTGACTGTCCGGGATGGCATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377039.2 ENST00000377045.9 |
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| CDS TCA 72 bp | GCATGGTCAGCGGGACATCTTCAAGGACCTCGACAATaGGCTCCTCGCCATCCAGGGGAGCAATGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: AWSAGHLQGPRQ*APRHPGEQWLC Trigger: ACACAGCCATTGCTCCCCTGGATGGCGAGGAGCTCATTGTCGAGGTCCTTGAAGATGTCCCGCTGACCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377039.2 ENST00000377045.9 ENST00000489496.1 |
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| CDS CCA 72 bp | GTCTTCCTGAGCACCTGCATCTCATTCTTGAAAGCCTaGGCCTGCTCAGCTGTGGGCTGGGACACCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VFLSTCISFLKA*ACSAVGWDTLS Trigger: GCTCAAGGTGTCCCAGCCCACAGCTGAGCAGGCCCAGGCTTTCAAGAATGAGATGCAGGTGCTCAGGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS GCA 72 bp | CCTTCAGGGCCTTGTCTAGAGAGTCGTAGACACTCATaGCATCCCGGACAGTCACCACCGTGCGTTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PSGPCLESRRHS*HPGQSPPCVAC Trigger: ACAAGCAACGCACGGTGGTGACTGTCCGGGATGGCATGAGTGTCTACGACTCTCTAGACAAGGCCCTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377039.2 ENST00000377045.9 |
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| CDS GCA 72 bp | TTCTTCTTGTCATCGGCCAAGGACTTCCGCTCGCGCTaGTCTGCTGGTGACTTGGAATGTGGGGACTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FFLSSAKDFRSR*SAGDLECGDFL Trigger: GAGGAAGTCCCCACATTCCAAGTCACCAGCAGAGCAGCGCGAGCGGAAGTCCTTGGCCGATGACAAGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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| CDS CAA 72 bp | CCCGGCCGGGTCATGAAGCCCATAAACAGCAAGATGTaGACATGTCGCGTCTTCCTGAGCACCTGCATCTCA | + |
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Preference number: 6 (lower is better) Translates to: PGRVMKPINSKM*TCRVFLSTCIS Trigger: TGAGATGCAGGTGCTCAGGAAGACGCGACATGTCAACATCTTGCTGTTTATGGGCTTCATGACCCGGCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377045.9 |
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