RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AR (Homo sapiens)

Ensembl gene IDs: ENSG00000169083

Ensembl transcript IDs: ENST00000374690.9, ENST00000396043.3, ENST00000396044.8, ENST00000504326.5, ENST00000513847.5, ENST00000514029.5, ENST00000612452.5, ENST00000613054.2

Found 1534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTaGGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: SAKFLPGSTPRKASD*ARASLHPPESVPGP
Trigger: GGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CCA 90 bp AATTGCTCCACAGTTGAGCAGTCTAGCCCCCAGGGACCAAGGCTGTaGGCAGGTACTGATGCTCCATTGCCCTCCTTGTCCTCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: NCSTVEQSSPQGPRL*AGTDAPLPSLSSPL
Trigger: GAGAGGAGAGGACAAGGAGGGCAATGGAGCATCAGTACCTGCCCACAGCCTTGGTCCCTGGGGGCTAGACTGCTCAACTGTGGAGCAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 90 bp CTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTaGATCCGCCTGAGTCAGTGCCTGGCCCCCATCATATGTGATCAA +
Preference number: 1 (lower is better)
Translates to: LAAHHEKQATEPELH*IRLSQCLAPIICDQ
Trigger: TTGATCACATATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CCA 90 bp CCCAGTTCATTGAGGCTAGAGAGCAAGGCTGCAAAGGAGTCGGGCTaGTTGTTGTCGTGTCCAGCACACACTACACCTGGCTCAATGGCT +
Preference number: 1 (lower is better)
Translates to: PSSLRLESKAAKESG*LLSCPAHTTPGSMA
Trigger: AGCCATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAATGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CCA 90 bp ACCAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTaGAGCCACACCAACCAGACCTTTCCGAAAGAAGCCATGGTTCTG +
Preference number: 1 (lower is better)
Translates to: TSVPGHTLSSWVAKY*SHTNQTFPKEAMVL
Trigger: CAGAACCATGGCTTCTTTCGGAAAGGTCTGGTTGGTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR TCA 90 bp TTTGGCCTCCCTCTGACTAAGAGGCAGCAACAAAGGTGGGGAATCTaGGTGAGTATGGGCAATGTCAGAGCCCAGAATCAGCAGCAGAGG +
Preference number: 1 (lower is better)
Translates to: FGLPLTKRQQQRWGI*VSMGNVRAQNQQQR
Trigger: CCTCTGCTGCTGATTCTGGGCTCTGACATTGCCCATACTCACTCAGATTCCCCACCTTTGTTGCTGCCTCTTAGTCAGAGGGAGGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR TCA 90 bp AACTCCCATGTCAGCTCAGAGGCTGGGCCTAGGCGAGCTGCCCAATaGACGAGAGCTGAAACTGCCACACGACTCTTTTCTTTGACTACA +
Preference number: 1 (lower is better)
Translates to: NSHVSSEAGPRRAAQ*TRAETATRLFSLTT
Trigger: TGTAGTCAAAGAAAAGAGTCGTGTGGCAGTTTCAGCTCTCGTTCATTGGGCAGCTCGCCTAGGCCCAGCCTCTGAGCTGACATGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR GCA 90 bp CGTAGACAGTCAGCCTCTTATTTTTCCAGGGCTATGCAGGGGCCATaGTCGGGTAGTTACTGGGCTGTCTGGAGAGAGTCTCCTGAAATG +
Preference number: 1 (lower is better)
Translates to: RRQSASYFSRAMQGP*SGSYWAVWRESPEM
Trigger: CATTTCAGGAGACTCTCTCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAATAAGAGGCTGACTGTCTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR GCA 90 bp TACAAGCTGTCTCTCTCCCAGTTCATTGAGGCTAGAGAGCAAGGCTaGAAAGGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTAC +
Preference number: 1 (lower is better)
Translates to: YKLSLSQFIEAREQG*KGVGLVVVVSSTHY
Trigger: GTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAATGAACTGGGAGAGAGACAGCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CCA 90 bp TCTTATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTaGGCTGTCTGGAGAGAGTCTCCTGAAATGCAGCTTTGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: SYFSRAMQGPCSGSY*AVWRESPEMQLWCR
Trigger: CCTGCACCAAAGCTGCATTTCAGGAGACTCTCTCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAATAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 90 bp CAATGTGTGACACTGTCAGCTTCTGGGTTGTCTCCTCAGTGGGGCTaGTGGTGCTGGAAGCCTCTCCTTCCTCCTGTAGTTTCAGATTAC +
Preference number: 1 (lower is better)
Translates to: QCVTLSASGLSPQWG*WCWKPLLPPVVSDY
Trigger: GTAATCTGAAACTACAGGAGGAAGGAGAGGCTTCCAGCACCACCAGCCCCACTGAGGAGACAACCCAGAAGCTGACAGTGTCACACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR TCA 90 bp ACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTaGGTCAGTGCCTGGCCCCCATCATATGTGATCAAGAACAATCAA +
Preference number: 1 (lower is better)
Translates to: TTKSKRLSQSFTASA*VSAWPPSYVIKNNQ
Trigger: TTGATTGTTCTTGATCACATATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CCA 90 bp CTCTGGCTCCAGCTCCTCCCTGACTCACACATGAGAAAGCAGACCTaGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTCCT +
Preference number: 1 (lower is better)
Translates to: LWLQLLPDSHMRKQT*IQMGPYKGLNLCSP
Trigger: AGGAGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCTCATGTGTGAGTCAGGGAGGAGCTGGAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 90 bp AAAGGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTACACCTaGCTCAATGGCTTCCAGGACATTCAGAAAGATGGGCTGACATTC +
Preference number: 1 (lower is better)
Translates to: KGVGLVVVVSSTHYT*LNGFQDIQKDGLTF
Trigger: GAATGTCAGCCCATCTTTCTGAATGTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CCA 90 bp CTTGTCCAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTaGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACT +
Preference number: 1 (lower is better)
Translates to: LVQGDTLSPISKVSS*QHTTKSKRLSQSFT
Trigger: AGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 90 bp GGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTaGGTTCATGGGTGGCAAAGTATTGGAGCCACACCAACCAGACCT +
Preference number: 1 (lower is better)
Translates to: GVPKDYIKPVSQGTP*VHGWQSIGATPTRP
Trigger: AGGTCTGGTTGGTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR TCA 90 bp CTAGCTCACCAGCTAAGTGGGTCTGAGTGGCCAGTCCCTCACAGGTaGGTACAGTATACCAACCATACCAACTCTGTTTGTAGAGCAGAG +
Preference number: 1 (lower is better)
Translates to: LAHQLSGSEWPVPHR*VQYTNHTNSVCRAE
Trigger: CTCTGCTCTACAAACAGAGTTGGTATGGTTGGTATACTGTACTCACCTGTGAGGGACTGGCCACTCAGACCCACTTAGCTGGTGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR TCA 90 bp CCATGGCTGAAATGCAGTGTGATGAAATTCAGGCCCACAAAACACTaGAGGGAGGACATAAGGTGCTTGTGGCTTCACGGAGTTTGGCAG +
Preference number: 1 (lower is better)
Translates to: PWLKCSVMKFRPTKH*REDIRCLWLHGVWQ
Trigger: CTGCCAAACTCCGTGAAGCCACAAGCACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCATTTCAGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR TCA 90 bp CACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTGTaGAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCC +
Preference number: 1 (lower is better)
Translates to: HPVTRAPQSQVREFV*KIERLLQVPMQETA
Trigger: GGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR TCA 90 bp GGAACCTCAGACAGACACAGTTGCTTCTTGTCCAAGGTGACACCTTaGGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAA +
Preference number: 1 (lower is better)
Translates to: GTSDRHSCFLSKVTP*VPSAKFLPGSTPRK
Trigger: TTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAACTGTGTCTGTCTGAGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CCA 90 bp ACCAGACCTTTCCGAAAGAAGCCATGGTTCTGTAGAAAGTCTCAATaGTTTGGCCTCCCTCTGACTAAGAGGCAGCAACAAAGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: TRPFRKKPWFCRKSQ*FGLPLTKRQQQRWG
Trigger: TCCCCACCTTTGTTGCTGCCTCTTAGTCAGAGGGAGGCCAAACCATTGAGACTTTCTACAGAACCATGGCTTCTTTCGGAAAGGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 90 bp GGCAAGTCAGGGAGAGTCCTTCTGACTCTCACATGTGTGTTTCCCTaGCTTCACAGACTCCACTTCTCCACTAGAAAGAAACTGGTGTCA +
Preference number: 1 (lower is better)
Translates to: GKSGRVLLTLTCVFP*LHRLHFSTRKKLVS
Trigger: TGACACCAGTTTCTTTCTAGTGGAGAAGTGGAGTCTGTGAAGCCAGGGAAACACACATGTGAGAGTCAGAAGGACTCTCCCTGACTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 90 bp GCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGTGTGTTTaGAGAGAGGGGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAAT +
Preference number: 1 (lower is better)
Translates to: ARCKRESRTVVSQCV*REGLAGFFSWRSRN
Trigger: ATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACCCCTCTCTTCAAACACACTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR GCA 90 bp AAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTaGTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCC +
Preference number: 1 (lower is better)
Translates to: KQTWIQMGPYKGLNL*SPSSQWSDFSVEVA
Trigger: GGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 90 bp AAGTCGGACTGTAGTCTCTCAGTGTGTTTGAAGAGAGGGGTTGGCTaGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTG +
Preference number: 1 (lower is better)
Translates to: KSDCSLSVCLKRGVG*LLLLEKQKSGPCLL
Trigger: CAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACCCCTCTCTTCAAACACACTGAGAGACTACAGTCCGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CCA 90 bp CAAAGTATTGGAGCCACACCAACCAGACCTTTCCGAAAGAAGCCATaGTTCTGTAGAAAGTCTCAATGGTTTGGCCTCCCTCTGACTAAG +
Preference number: 1 (lower is better)
Translates to: QSIGATPTRPFRKKP*FCRKSQWFGLPLTK
Trigger: CTTAGTCAGAGGGAGGCCAAACCATTGAGACTTTCTACAGAACCATGGCTTCTTTCGGAAAGGTCTGGTTGGTGTGGCTCCAATACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 90 bp CACACACTACACCTGGCTCAATGGCTTCCAGGACATTCAGAAAGATaGGCTGACATTCATAGCCTTCAATGTGTGACACTGTCAGCTTCT +
Preference number: 1 (lower is better)
Translates to: HTLHLAQWLPGHSER*ADIHSLQCVTLSAS
Trigger: AGAAGCTGACAGTGTCACACATTGAAGGCTATGAATGTCAGCCCATCTTTCTGAATGTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR TCA 90 bp TTGTCTAAGGGCTCCAGCGATCTGAGAGTTGGTAAGAAATCTTTGTaGCTACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: LSKGSSDLRVGKKSL*LLASTDRCQSCWPA
Trigger: AGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTAGTCACAAAGATTTCTTACCAACTCTCAGATCGCTGGAGCCCTTAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 90 bp TCTGTTTCCCTAAATAGTCATAAAATGGGCTGGCATGAGGTCCACTaGATGCCAGCTGGCTCTGAAATTCTTGACTGTCTGATGTTGCTC +
Preference number: 1 (lower is better)
Translates to: SVSLNSHKMGWHEVH*MPAGSEILDCLMLL
Trigger: GAGCAACATCAGACAGTCAAGAATTTCAGAGCCAGCTGGCATGCAGTGGACCTCATGCCAGCCCATTTTATGACTATTTAGGGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR CCA 90 bp TCTTTGTTCCTTCTCTCTTCTCATGACTTCTGCAGGTGGATATGCTaGGTGACAAGAAGAGCATTTGCAGGGTTTCTGGTTCTAGTGCCT +
Preference number: 1 (lower is better)
Translates to: SLFLLSSHDFCRWIC*VTRRAFAGFLVLVP
Trigger: AGGCACTAGAACCAGAAACCCTGCAAATGCTCTTCTTGTCACCCAGCATATCCACCTGCAGAAGTCATGAGAAGAGAGAAGGAACAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR TCA 90 bp CTTGGGAGAAGAATGAGAGGCTTACAACTGATGAAGAGAAGCATGTaGTGTGAGAGAGCAATCAAGGAGTGTGGCTACAGTAAGGCTAGA +
Preference number: 1 (lower is better)
Translates to: LGRRMRGLQLMKRSM*CERAIKECGYSKAR
Trigger: TCTAGCCTTACTGTAGCCACACTCCTTGATTGCTCTCTCACATCACATGCTTCTCTTCATCAGTTGTAAGCCTCTCATTCTTCTCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 90 bp ATGAGGTCCACTGCATGCCAGCTGGCTCTGAAATTCTTGACTGTCTaGTGTTGCTCTGTGTCTTTCTTCATAGTCGTATCCTTCCATCAT +
Preference number: 1 (lower is better)
Translates to: MRSTACQLALKFLTV*CCSVSFFIVVSFHH
Trigger: ATGATGGAAGGATACGACTATGAAGAAAGACACAGAGCAACATCAGACAGTCAAGAATTTCAGAGCCAGCTGGCATGCAGTGGACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR TCA 90 bp CCCTTTGATGCCTTCTTTCCAGTTTGTCTAAGGGCTCCAGCGATCTaGGAGTTGGTAAGAAATCTTTGTGACTACTGGCATCTACAGATA +
Preference number: 1 (lower is better)
Translates to: PFDAFFPVCLRAPAI*ELVRNLCDYWHLQI
Trigger: TATCTGTAGATGCCAGTAGTCACAAAGATTTCTTACCAACTCTCAGATCGCTGGAGCCCTTAGACAAACTGGAAAGAAGGCATCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 90 bp GTTCATGACAGACTGTACATCAATAGAGGAAATTCCCCAAGGCACTaGAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAA +
Preference number: 1 (lower is better)
Translates to: VHDRLYINRGNSPRH*RGVVQSYNRQKTSE
Trigger: TTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCTTGGGGAATTTCCTCTATTGATGTACAGTCTGTCATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
3UTR CCA 90 bp TGTTTCCCTGGCTTCACAGACTCCACTTCTCCACTAGAAAGAAACTaGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATT +
Preference number: 1 (lower is better)
Translates to: CFPGFTDSTSPLERN*CQYGSYGAEREQDI
Trigger: AATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTTCTAGTGGAGAAGTGGAGTCTGTGAAGCCAGGGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 90 bp CCCCAAGTTTGGGCCTTCCCTGTGGTAAATCTCAGTCAGTTCCATTaGGTTTTTATGCTTTCCACATTCATCTGTCTTGAACTAGTAAAG +
Preference number: 1 (lower is better)
Translates to: PQVWAFPVVNLSQFH*VFMLSTFICLELVK
Trigger: CTTTACTAGTTCAAGACAGATGAATGTGGAAAGCATAAAAACTCAATGGAACTGACTGAGATTTACCACAGGGAAGGCCCAAACTTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 90 bp CCCATGGGCCTGCAATTTTCACCTTCTCGTCACTATTGGCCTCTTTaGGGATTTCTATATGTTTGTATGTATGTGTGTATGTATGTACGT +
Preference number: 1 (lower is better)
Translates to: PMGLQFSPSRHYWPL*GFLYVCMYVCMYVR
Trigger: ACGTACATACATACACACATACATACAAACATATAGAAATCCCCAAAGAGGCCAATAGTGACGAGAAGGTGAAAATTGCAGGCCCATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 90 bp GTCAATCTCTTAATCAAAGAAAAACACCCTACCTGTGGGCAGAAATaGACCTGCACCTACAGAGATACAACTTCTAGTACTCTGACAAGT +
Preference number: 1 (lower is better)
Translates to: VNLLIKEKHPTCGQK*TCTYRDTTSSTLTS
Trigger: ACTTGTCAGAGTACTAGAAGTTGTATCTCTGTAGGTGCAGGTCCATTTCTGCCCACAGGTAGGGTGTTTTTCTTTGATTAAGAGATTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 90 bp AACTTTTTGTGCCATCCAAAGTGGGCAGAAATAAGGATTTCTGCCTaGTGTCCCTCTAGTGCAAAATCTAGTACTTTAAATGCTCCCTTA +
Preference number: 1 (lower is better)
Translates to: NFLCHPKWAEIRISA*CPSSAKSSTLNAPL
Trigger: TAAGGGAGCATTTAAAGTACTAGATTTTGCACTAGAGGGACAGCAGGCAGAAATCCTTATTTCTGCCCACTTTGGATGGCACAAAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 90 bp TTTGTTTTGATTTCCCCAGATAATCTTAGCTCTCTAAACTTCCCGTaGCATAAGATAAGTAAACGTTTGTGTGGCTGGCACAGAGTAGTG +
Preference number: 1 (lower is better)
Translates to: FVLISPDNLSSLNFP*HKISKRLCGWHRVV
Trigger: CACTACTCTGTGCCAGCCACACAAACGTTTACTTATCTTATGCCACGGGAAGTTTAGAGAGCTAAGATTATCTGGGGAAATCAAAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
3UTR TCA 90 bp CAAGCCACATTACAGGAAACAATAATCATGATACTCACAACTACATaGATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATC +
Preference number: 1 (lower is better)
Translates to: QATLQETIIMILTTT*MVTTITSTARPHNI
Trigger: GATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATTCATGTAGTTGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR GCA 90 bp TACAGTATACCAACCATACCAACTCTGTTTGTAGAGCAGAGCGCATaGAAAATGAGACTTCTGTCAATTACATTGGCTAGAACATCAATG +
Preference number: 1 (lower is better)
Translates to: YSIPTIPTLFVEQSA*KMRLLSITLARTSM
Trigger: CATTGATGTTCTAGCCAATGTAATTGACAGAAGTCTCATTTTGCATGCGCTCTGCTCTACAAACAGAGTTGGTATGGTTGGTATACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 90 bp AGGTTCCCCTCTCCCTTGTTATTTAAAGCTGTTTTGAAGTTCGTTTaGCTATTAATATCAATGCAGAAATCAGGGAAGGAAACCCTTGTG +
Preference number: 1 (lower is better)
Translates to: RFPSPLLFKAVLKFV*LLISMQKSGKETLV
Trigger: CACAAGGGTTTCCTTCCCTGATTTCTGCATTGATATTAATAGCCAAACGAACTTCAAAACAGCTTTAAATAACAAGGGAGAGGGGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR TCA 90 bp GGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAAACTCTAAGTaGTTCTTCTTTGACATCAATACAATATTTGAGTCTGGCTTGGGA +
Preference number: 1 (lower is better)
Translates to: GSYGAEREQDIPNSK*FFFDINTIFESGLG
Trigger: TCCCAAGCCAGACTCAAATATTGTATTGATGTCAAAGAAGAATCACTTAGAGTTTGGAATATCTTGTTCTCTCTCTGCTCCATAGCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR GCA 90 bp AACCTAGCACCTTGCTATACTGAATTGGAATCAGAAGCCAATCAATaGATATTACCTACTTTCTGGCCAAATCAAATGAGGATAAATCAA +
Preference number: 1 (lower is better)
Translates to: NLAPCYTELESEANQ*ILPTFWPNQMRINQ
Trigger: TTGATTTATCCTCATTTGATTTGGCCAGAAAGTAGGTAATATGCATTGATTGGCTTCTGATTCCAATTCAGTATAGCAAGGTGCTAGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAGCTCTGGGGTCACTCTaGCCTCTAATGGCAATAGCC +
Preference number: 2 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPALGSL*PLMAIA
Trigger: GGCTATTGCCATTAGAGGGCAGAGTGACCCCAGAGC...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGGAGGGTATCATCTCTaGGGGACAAGGGCAAGACGC +
Preference number: 2 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHGGYHL*GTRARR
Trigger: GCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CCA 90 bp AAGGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTACACCTGGCTCAATGGGGTTGTCTCCTCAGTaGGGCTGGTGGTGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: KESGWLLSCPAHTTPGSMGLSPQ*GWWCWK
Trigger: CTTCCAGCACCACCAGCCCCACTGAGGAGACAACCC...CATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CCA 90 bp GGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTACACCTGGCTCAATGGCGACACTGTCAGCTTCTaGGTTGTCTCCTCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: GVGLVVVVSSTHYTWLNGDTVSF*VVSSVG
Trigger: CCCCACTGAGGAGACAACCCAGAAGCTGACAGTGTC...GCCATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR TCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCATCCCTGACTCACACATaGGAAAGCAGACCTGGATCC +
Preference number: 2 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPSLTHT*ESRPGS
Trigger: GGATCCAGGTCTGCTTTCTCATGTGTGAGTCAGGGA...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CAA 90 bp GCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAGCTaGCCTGATCCCTTTGATGCCTTCTTTCCAGTTTGTCTAAGGGCT +
Preference number: 2 (lower is better)
Translates to: AGRVSSLGDKGKTPS*PDPFDAFFPVCLRA
Trigger: AGCCCTTAGACAAACTGGAAAGAAGGCATCAAAGGGATCAGGCAAGCTGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CAA 90 bp TCATTGAGGCTAGAGAGCAAGGCTGCAAAGGAGTCGGGCTGGTTGTaGTCGTGTCCAGCACACACTACACCTGGCTCAATGGCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: SLRLESKAAKESGWL*SCPAHTTPGSMASR
Trigger: CCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAAATTCCCCAAGGCACTaGAGAGGAGTAGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPNSPRH*RGVVQS
Trigger: ACTCTGCACTACTCCTCTGCAGTGCCTTGGGGAATT...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp CGGAAGCCAGGCAAGGCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTAGGATCTTGGGCACTTaGACAGAGATGATCTCTGCC +
Preference number: 2 (lower is better)
Translates to: RKPGKALAHLTTCTSCLSRILGT*TEMISA
Trigger: GGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCT...AGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CAA 90 bp AGTTCATTGAGGCTAGAGAGCAAGGCTGCAAAGGAGTCGGGCTGGTaGTTGTCGTGTCCAGCACACACTACACCTGGCTCAATGGCTTCC +
Preference number: 2 (lower is better)
Translates to: SSLRLESKAAKESGW*LSCPAHTTPGSMAS
Trigger: GGAAGCCATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAATGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CAA 90 bp TTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCATaGAGGCTAGAGAGCAAGGCTGCAAAGGAGTCGGGCTGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: LAHLTTCTSCLSPSS*RLESKAAKESGWLL
Trigger: CAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAATGAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR TCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGGCTGTGGGCAGGTACTaGTGCTCCATTGCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKAVGRY*CSIALL
Trigger: AAGGAGGGCAATGGAGCATCAGTACCTGCCCACAGC...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp GCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCATTGAGGTGCAGCTTCCACATGTaGGAGCTCCATAGTGACACC +
Preference number: 2 (lower is better)
Translates to: ALAHLTTCTSCLSPSSLRCSFHM*ELHSDT
Trigger: GGTGTCACTATGGAGCTCTCACATGTGGAAGCTGCA...CCTCAATGAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR TCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTTTCACTGCATCCGCCTaGGTCAGTGCCTGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ECGYSKARCKRESRTVVSFTASA*VSAWPP
Trigger: TGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAA...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp AGAGCAAGGCTGCAAAGGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTAGGGCATGAGCTGGGGTaGGGAAATAGGGTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: RARLQRSRAGCCRVQHTLGHELG*GNRVSN
Trigger: ATTGGAAACCCTATTTCCCCACCCCAGCTCATGCCC...TAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CCA 90 bp GCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCATTGAGGAGCACACACTACACCTaGCTCAATGGCTTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: ALAHLTTCTSCLSPSSLRSTHYT*LNGFQD
Trigger: GTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCT...CCTCAATGAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CCA 90 bp ACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATAAGCAAAGTTTCTTCCTaGCAGCACACCACGAAAAGC +
Preference number: 2 (lower is better)
Translates to: TEPELHCIRLSQCLAPIISKVSS*QHTTKS
Trigger: GCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCT...TATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp GAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATATGTGATCAAAAGAGAGGGGTTGGCTaGCTTCTTCTCCTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: ELHCIRLSQCLAPIICDQKRGVG*LLLLEK
Trigger: CTTCTCCAGGAGAAGAAGCCAGCCAACCCCTCTCTT...TTGATCACATATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 90 bp AACCAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATaGGAGCCACACCAACCAGACCTTTCCGAAAGAAGCCATGGTTCT +
Preference number: 2 (lower is better)
Translates to: NQCPRAHPEFMGGKV*EPHQPDLSERSHGS
Trigger: AGAACCATGGCTTCTTTCGGAAAGGTCTGGTTGGTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CAA 90 bp TCAGGTCCCATTAGGGGGCCACTGGTCAATCACTTGGGTAGGCTTTaGGCCCCAAGTTTGGGCCTTCCCTGTGGTAAATCTCAGTCAGTT +
Preference number: 2 (lower is better)
Translates to: SGPIRGPLVNHLGRL*APSLGLPCGKSQSV
Trigger: AACTGACTGAGATTTACCACAGGGAAGGCCCAAACTTGGGGCCAAAAGCCTACCCAAGTGATTGACCAGTGGCCCCCTAATGGGACCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGGAAGCAAAGTCTaGAGGTGCCATGGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRMGSKV*RCHGRV
Trigger: AACCCTCCCATGGCACCTTCAGACTTTGCTTCCCAT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp TTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGTCTCACAACATCCCTGTaGGGTAGGAAAACACTATTG +
Preference number: 2 (lower is better)
Translates to: LVPLEGVSNQESSPQPQRLTTSL*GRKTLL
Trigger: CAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAG...ACGTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp TTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGAGAGCCAGAGCTTCACTaGATCCGCCTGAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: LSPISKVSSWQHTTKSKREPELH*IRLSQC
Trigger: GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTC...TCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp ACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATATGCAATCATTTCTGCTaGCGCACAGGTACTTCTGTT +
Preference number: 2 (lower is better)
Translates to: TEPELHCIRLSQCLAPIICNHFC*RTGTSV
Trigger: AACAGAAGTACCTGTGCGCCAGCAGAAATGATTGCA...TATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR-3UTR TCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGCTGTGGGCAGGTACTaGTGCTCCATTGCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAAVGRY*CSIALL
Trigger: AAGGAGGGCAATGGAGCATCAGTACCTGCCCACAGC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp TTGCTTCTTGTCCAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGGAGCCAGAGCTTCACTaGATCCGCCTGAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: LLLVQGDTLSPISKVSSWEPELH*IRLSQC
Trigger: GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTC...CCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGGAGCCAGAGCTTCACTaGATCCGCCTGAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: CGYSKARCKRESRTVVSQEPELH*IRLSQC
Trigger: GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTC...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp GAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATATGTGATCAACTGGTCATTTTGAGATaGTTGCAATTGCCAACCCGG +
Preference number: 2 (lower is better)
Translates to: ELHCIRLSQCLAPIICDQLVILR*LQLPTR
Trigger: CCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAG...TTGATCACATATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAGAAGTCGCCAAGTTTTaGCTGAAGAGAACATTCAGT +
Preference number: 2 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPEVAKF*LKRTFS
Trigger: ACTGAATGTTCTCTTCAGCCAAAACTTGGCGACTTC...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGTGGGTGGCAAAGTATTaGAGCCACACCAACCAGACC +
Preference number: 2 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKWVAKY*SHTNQT
Trigger: GGTCTGGTTGGTGTGGCTCCAATACTTTGCCACCCA...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR TCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGCCCACAAAACACTaGAGGGAGGACATAAGGTGC +
Preference number: 2 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMRPTKH*REDIRC
Trigger: GCACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCT...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp CAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCACTAGAGCCCTCATTTTaGATGAGGCAAGTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: QHPCEVGKHYWSRWRESALEPSF*MRQVSL
Trigger: AAGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAG...TGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGACAAGAAGAGCATTTaGAGGGTTTCTGGTTCTAGT +
Preference number: 2 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHDKKSI*RVSGSS
Trigger: ACTAGAACCAGAAACCCTGCAAATGCTCTTCTTGTC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR GCA 90 bp TCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCAGGTCAAAAGTGAACTCTCTCGCAATAGGCTaGACGGAGTCCAGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: SGKSTLTMCDLISRSKVNSLAIG*TESRSL
Trigger: CAAGCTCCTGGACTCCGTGCAGCCTATTGCGAGAGA...GTTCACTTTTGACCTGCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR GCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTATCCGCCTGAGTCAGTaGCTGGCCCCCATCATATGT +
Preference number: 2 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPIRLSQ*LAPIIC
Trigger: ACATATGATGGGGGCCAGGCACTGACTCAGGCGGAT...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTATCCGCCTGAGTCAGTaGCTGGCCCCCATCATATGT +
Preference number: 2 (lower is better)
Translates to: ECGYSKARCKRESRTVVSIRLSQ*LAPIIC
Trigger: ACATATGATGGGGGCCAGGCACTGACTCAGGCGGAT...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp AAATTCTGCCCTGAGAAGGGGGAAACTCCCCTCCTGAAGTCCTTCCTTGGCTTTGCTGGCTTCTTCTCCTaGAGAAGCAGAAATCTGGTC +
Preference number: 2 (lower is better)
Translates to: KFCPEKGETPLLKSFLGFAGFFS*RSRNLV
Trigger: GACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGC...AAAGCCAAGGAAGGACTTCAGGAGGGGAGTTTCCCCCTTCTCAGGGCAGAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 90 bp AGGAACCTCAGACAGACACAGTTGCTTCTTGTCCAAGGTGACACCTaGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAA +
Preference number: 2 (lower is better)
Translates to: RNLRQTQLLLVQGDT*SPISKVSSWQHTTK
Trigger: TTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAACTGTGTCTGTCTGAGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCTCCCTGACTCACACATaGGAAAGCAGACCTGGATCC +
Preference number: 2 (lower is better)
Translates to: GICVKDRALAPGSNAGNCSLTHT*ESRPGS
Trigger: GGATCCAGGTCTGCTTTCTCATGTGTGAGTCAGGGA...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGTCCCACCCTGGTAATTaGGTTTTCTCTTCAACCCTG +
Preference number: 2 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKSHPGN*VFSSTL
Trigger: CAGGGTTGAAGAGAAAACTCAATTACCAGGGTGGGA...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGATCCCAGGGCACACCCTaGGTTCATGGGTGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: NVMSEALPNQCSSLEESRSQGTP*VHGWQS
Trigger: ACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGA...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR TCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTCGAAAAGCAAGCGACTaGGCCAGAGCTTCACTGCAT +
Preference number: 2 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPRKASD*ARASLH
Trigger: ATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCG...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAAGCTCTGGGGTCACTCTaGCCTCTAATGGCAATAGCC +
Preference number: 2 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQALGSL*PLMAIA
Trigger: GGCTATTGCCATTAGAGGGCAGAGTGACCCCAGAGC...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAGGTGAGGCATTAACATaGAGACAAATTTTCAACAAC +
Preference number: 2 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPGEALT*RQIFNN
Trigger: GTTGTTGAAAATTTGTCTGCATGTTAATGCCTCACC...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGGAGGACATAAGGTaGTTGTGGCTTCACGGAGTT +
Preference number: 2 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMREDIR*LWLHGV
Trigger: AACTCCGTGAAGCCACAAGCACCTTATGTCCTCCCT...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp TTTCTCCCAGAGTCATCCCTGCTTCATAACATTTCCGAAGACGACAAGATGGACCAGTCCCATTGGTGCTaGCATGCAGTATGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: FLPESSLLHNISEDDKMDQSHWC*HAVWLG
Trigger: CCCAAGCCATACTGCATGGCAGCACCAATGGGACTG...GTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR-3UTR CCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCGGGCATGAGCTGGGGTaGGGAAATAGGGTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: GICVKDRALAPGSNAGNCGHELG*GNRVSN
Trigger: ATTGGAAACCCTATTTCCCCACCCCAGCTCATGCCC...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGGACATAAGGTGCTTGTaGCTTCACGGAGTTTGGCAG +
Preference number: 2 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMDIRCL*LHGVWQ
Trigger: CTGCCAAACTCCGTGAAGCCACAAGCACCTTATGTC...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGAGTAAACTCACCAGATaGTGTCCATCTGGCTTTAGG +
Preference number: 2 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRSKLTR*CPSGFR
Trigger: CCTAAAGCCAGATGGACACCATCTGGTGAGTTTACT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CCA 90 bp GCCATCCAAACTCTTGAGAGAGGTGCCTCATTCGGACACACTGGCTGTACATCCTGCAATCATTTCTGCTaGCGCACAGGTACTTCTGTT +
Preference number: 2 (lower is better)
Translates to: AIQTLERGASFGHTGCTSCNHFC*RTGTSV
Trigger: AACAGAAGTACCTGTGCGCCAGCAGAAATGATTGCA...GGATGTACAGCCAGTGTGTCCGAATGAGGCACCTCTCTCAAGAGTTTGGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CAA 90 bp TGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTaGGTGGTGGGGGCTCTTAACAGAGAATCTGTGAACATGCCCAAA +
Preference number: 2 (lower is better)
Translates to: WHLQIDVRAVGLLTF*VVGALNRESVNMPK
Trigger: TTTGGGCATGTTCACAGATTCTCTGTTAAGAGCCCCCACCACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CAA 90 bp GTGGAAATAGATGGGCTTGACTTTCCCAGAAAGGATCTTGGGCACTaGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCT +
Preference number: 2 (lower is better)
Translates to: VEIDGLDFPRKDLGH*HRDDLCHHFRKVHA
Trigger: AGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGGAAAGTCAAGCCCATCTATTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
3UTR CAA 90 bp AGGGGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTaGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: RGWLASSPGEAEIWS*FTELLWISYYLQLS
Trigger: ACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp TCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCAGGTCAAAAGTGAACAATTCCCCAAGGCACTaGAGAGGAGTAGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: SGKSTLTMCDLISRSKVNNSPRH*RGVVQS
Trigger: ACTCTGCACTACTCCTCTGCAGTGCCTTGGGGAATT...GTTCACTTTTGACCTGCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR GCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCAATTCCCCAAGGCACTaGAGAGGAGTAGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: GICVKDRALAPGSNAGNCNSPRH*RGVVQS
Trigger: ACTCTGCACTACTCCTCTGCAGTGCCTTGGGGAATT...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTAACTCCCCATGGGCCTaGAATTTTCACCTTCTCGTC +
Preference number: 2 (lower is better)
Translates to: STQTPSNKSTSISGEGICNSPWA*NFHLLV
Trigger: GACGAGAAGGTGAAAATTGCAGGCCCATGGGGAGTT...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACTTCAGTATAATGAATTaGTCCACAGTTGAGCAGTCT +
Preference number: 2 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHFSIMN*STVEQS
Trigger: AGACTGCTCAACTGTGGAGCAATTCATTATACTGAA...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR GCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGGTGAGGCATTAACATaGAGACAAATTTTCAACAAC +
Preference number: 2 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHGEALT*RQIFNN
Trigger: GTTGTTGAAAATTTGTCTGCATGTTAATGCCTCACC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR GCA 90 bp AAATTCTGCCCTGAGAAGGGGGAAACTCCCCTCCTGAAGTCCTTCCTTGGCTTTTCAGACAGACACAGTTaGTTCTTGTCCAAGGTGACA +
Preference number: 2 (lower is better)
Translates to: KFCPEKGETPLLKSFLGFSDRHS*FLSKVT
Trigger: TGTCACCTTGGACAAGAAGCAACTGTGTCTGTCTGA...AAAGCCAAGGAAGGACTTCAGGAGGGGAGTTTCCCCCTTCTCAGGGCAGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp TGTGTGTTTCCCTGGCTTCACAGACTCCACTTCTCCACTAGAAAGAAACTGGTGATGAGGTCCACTGCATaGCAGCTGGCTCTGAAATTC +
Preference number: 2 (lower is better)
Translates to: CVFPWLHRLHFSTRKKLVMRSTA*QLALKF
Trigger: GAATTTCAGAGCCAGCTGGCATGCAGTGGACCTCAT...CACCAGTTTCTTTCTAGTGGAGAAGTGGAGTCTGTGAAGCCAGGGAAACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGGGGCATGAGCTGGGGTaGGGAAATAGGGTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVGHELG*GNRVSN
Trigger: ATTGGAAACCCTATTTCCCCACCCCAGCTCATGCCC...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCAGACATAAGGTGCTTGTaGCTTCACGGAGTTTGGCAG +
Preference number: 2 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSDIRCL*LHGVWQ
Trigger: CTGCCAAACTCCGTGAAGCCACAAGCACCTTATGTC...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCAACTTCTCCACTTGCTaGGAGGGTATCATCTCTGGG +
Preference number: 2 (lower is better)
Translates to: GICVKDRALAPGSNAGNCNFSTC*EGIISG
Trigger: CCCAGAGATGATACCCTCCCAGCAAGTGGAGAAGTT...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATGCAAAGGAGTCGGGCTaGTTGTTGTCGTGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDAKESG*LLSCPA
Trigger: TGCTGGACACGACAACAACCAGCCCGACTCCTTTGC...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CCA 90 bp ATGAATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGCACTATTGGTCCCGCTaGAGGGAGTCAGCAATCAAG +
Preference number: 2 (lower is better)
Translates to: MNGNHYYFYSPSSQHPCEHYWSR*RESAIK
Trigger: CTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTG...CTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGAATGGGAAGCAAAGTCTaGAGGTGCCATGGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: NVMSEALPNQCSSLEESRMGSKV*RCHGRV
Trigger: AACCCTCCCATGGCACCTTCAGACTTTGCTTCCCAT...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp GCCTTTCTTCAGGGTCTGGTCATTTTGAGATGCTTGCAATTGCCAACCCGGAATCTAGAGCCCTCATTTTaGATGAGGCAAGTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: AFLQGLVILRCLQLPTRNLEPSF*MRQVSL
Trigger: AAGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAG...ATTCCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAGACCCTGAAGAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp GGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACTTCGAGAAGCATGTGATGTaGGAGAGCAATCAAGGAGTG +
Preference number: 2 (lower is better)
Translates to: GWLLLLEKQKSGPCLLNFEKHVM*ESNQGV
Trigger: CACTCCTTGATTGCTCTCTCACATCACATGCTTCTC...GAAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTAACTCCCCATGGGCCTaGAATTTTCACCTTCTCGTC +
Preference number: 2 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSNSPWA*NFHLLV
Trigger: GACGAGAAGGTGAAAATTGCAGGCCCATGGGGAGTT...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGGAGAACTTCTCCACTTaGTGGGAGGGTATCATCTCT +
Preference number: 2 (lower is better)
Translates to: VFQVTRATHSKASHLIPQENFST*WEGIIS
Trigger: AGAGATGATACCCTCCCAGCAAGTGGAGAAGTTCTC...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCACAGAGATGATCTCTaGCATCATTTCCGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMHRDDL*HHFRKV
Trigger: GACTTTCCGGAAATGATGGCAGAGATCATCTCTGTG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR GCA 90 bp TGTGTTGAGGAGCAAAAACCTAAGCTCCTAAGCCTCAGACGCCAGGTTTCTCCATCCCAGAGTCATCCCTaGTTCATAACATTTCCGAAG +
Preference number: 2 (lower is better)
Translates to: CVEEQKPKLLSLRRQVSPSQSHP*FITFPK
Trigger: CTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGA...TGGAGAAACCTGGCGTCTGAGGCTTAGGAGCTTAGGTTTTTGCTCCTCAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGACACTATTGGCCTCTTTaGGGATTTCTATATGTTTGT +
Preference number: 2 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGHYWPL*GFLYVC
Trigger: ACAAACATATAGAAATCCCCAAAGAGGCCAATAGTG...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCCTTCTCGTCACTATTaGCCTCTTTGGGGATTTCTA +
Preference number: 2 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMPSRHY*PLWGFL
Trigger: TAGAAATCCCCAAAGAGGCCAATAGTGACGAGAAGG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGAATGGCAATAGCCATTaGCAGAAAATAAAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRNGNSH*QKIKSP
Trigger: GGGAGACTTTATTTTCTGCCAATGGCTATTGCCATT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACCAGGGACCAAGGCTGTaGGCAGGTACTGATGCTCCA +
Preference number: 2 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNQGPRL*AGTDAP
Trigger: TGGAGCATCAGTACCTGCCCACAGCCTTGGTCCCTG...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCCAGGGACCAAGGCTGTaGGCAGGTACTGATGCTCCA +
Preference number: 2 (lower is better)
Translates to: SWQTSKPIFYTMDDISESQGPRL*AGTDAP
Trigger: TGGAGCATCAGTACCTGCCCACAGCCTTGGTCCCTG...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCAGGTCAGACTTTTCTGTaGAAGTCGCCAAGTTTTGGC +
Preference number: 2 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSGQTFL*KSPSFG
Trigger: GCCAAAACTTGGCGACTTCCACAGAAAAGTCTGACC...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CCA 90 bp CTGGCTGTACATCCGGGACTTGTGCATGCGGTACTCATTGAAAACCAGATCAGGCCGAAGACGACAAGATaGACAATTTTTCCTTCGGAA +
Preference number: 2 (lower is better)
Translates to: LAVHPGLVHAVLIENQIRPKTTR*TIFPSE
Trigger: TTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGG...CCTGATCTGGTTTTCAATGAGTACCGCATGCACAAGTCCCGGATGTACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTAGCAAAGTTTCTTCCTaGCAGCACACCACGAAAAGC +
Preference number: 2 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPSKVSS*QHTTKS
Trigger: GCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCT...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp AAATTCTGCCCTGAGAAGGGGGAAACTCCCCTCCTGAAGTCCTTCCTTGGCTTTAAACTGGTGTCAATATaGAAGCTATGGAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: KFCPEKGETPLLKSFLGFKLVSI*KLWSRE
Trigger: CTCTCTGCTCCATAGCTTCCATATTGACACCAGTTT...AAAGCCAAGGAAGGACTTCAGGAGGGGAGTTTCCCCCTTCTCAGGGCAGAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp GTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTTAAAGGCTCCAGCTCCTCCCTaGCTCACACATGAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: VNKHNLTLGHMRIITDLKAPAPP*LTHEKA
Trigger: TGCTTTCTCATGTGTGAGTCAGGGAGGAGCTGGAGC...CTTTAAATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCTGTCAGTCCCATTGGTaGTGCCATGCAGTATGGCTT +
Preference number: 2 (lower is better)
Translates to: EIWSLFTELLWISYYLQLCQSHW*CHAVWL
Trigger: AAGCCATACTGCATGGCAGCACCAATGGGACTGACA...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTATGAGAAAGCAGACCTaGATCCAAATGGGGCCTTAC +
Preference number: 2 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSMRKQT*IQMGPY
Trigger: GTAAGGCCCCATTTGGATCCAGGTCTGCTTTCTCAT...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGACATTATTTTTCAACCTaGACAATTACCTCAGCAACT +
Preference number: 2 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGHYFST*TITSAT
Trigger: AGTTGCTGAGGTAATTGTCCAGGTTGAAAAATAATG...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCGGAGAAGCAGAAATCTaGTCCTTGTTTACTGAACTT +
Preference number: 2 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFGEAEI*SLFTEL
Trigger: AAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCC...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 90 bp ACGTTTGTGTGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTaGACACTGGGCCATATGAGGATCATCACAGATTTAAAGGCATAC +
Preference number: 2 (lower is better)
Translates to: TFVWLAQSSAVNKHN*TLGHMRIITDLKAY
Trigger: GTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCACACAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
3UTR CAA 90 bp GGCCAAGATGAGAAAGTAGGTGGACATTTTCCCTTGCACTTGGGCTaGAAGAACGAAGTCAACAGAACACAGGTGTGCCAAAAGACTATA +
Preference number: 2 (lower is better)
Translates to: GQDEKVGGHFPLHLG*KNEVNRTQVCQKTI
Trigger: TATAGTCTTTTGGCACACCTGTGTTCTGTTGACTTCGTTCTTCAAGCCCAAGTGCAAGGGAAAATGTCCACCTACTTTCTCATCTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR TCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCTCGCCAAGTTTTGGCTaGAGAGAACATTCAGTTCAA +
Preference number: 2 (lower is better)
Translates to: GICVKDRALAPGSNAGNCSPSFG*REHSVQ
Trigger: TTGAACTGAATGTTCTCTTCAGCCAAAACTTGGCGA...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGAGGGCTCCAGCGATCTaGGAGTTGGTAAGAAATCTT +
Preference number: 2 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQRAPAI*ELVRNL
Trigger: AAGATTTCTTACCAACTCTCAGATCGCTGGAGCCCT...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp TGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTGCTTCATAACATTTCCGAACTCACAACATCCCTGTaGGGTAGGAAAACACTATTG +
Preference number: 2 (lower is better)
Translates to: CQPGIFLPESSLLHNISELTTSL*GRKTLL
Trigger: CAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAG...TTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCGAGAAGCATGTGATGTaGGAGAGCAATCAAGGAGTG +
Preference number: 2 (lower is better)
Translates to: EIWSLFTELLWISYYLQLEKHVM*ESNQGV
Trigger: CACTCCTTGATTGCTCTCTCACATCACATGCTTCTC...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTAAAGGGTTAAATCTCTaGTCTCCTTCTTCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: STQTPSNKSTSISGEGICKGLNL*SPSSQW
Trigger: CCACTGAGAAGAAGGAGAGCAGAGATTTAACCCTTT...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR GCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGGGTAGCCCCTTTAGCTaGTCTAAAGAAGGAAGTGAG +
Preference number: 2 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQGSPFS*SKEGSE
Trigger: CTCACTTCCTTCTTTAGAGCAGCTAAAGGGGCTACC...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAATGGCAATAGCCATTaGCAGAAAATAAAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMNGNSH*QKIKSP
Trigger: GGGAGACTTTATTTTCTGCCAATGGCTATTGCCATT...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATATGAGAAAGCAGACCTaGATCCAAATGGGGCCTTAC +
Preference number: 2 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDMRKQT*IQMGPY
Trigger: GTAAGGCCCCATTTGGATCCAGGTCTGCTTTCTCAT...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGAATCTTTGTGACTACTaGCATCTACAGATAGATGTC +
Preference number: 2 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKNLCDY*HLQIDV
Trigger: GACATCTATCTGTAGATGCCAGTAGTCACAAAGATT...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGACATGACTTCTGCAGGTaGATATGCTGGGTGACAAGA +
Preference number: 2 (lower is better)
Translates to: NVMSEALPNQCSSLEESRHDFCR*ICWVTR
Trigger: TCTTGTCACCCAGCATATCCACCTGCAGAAGTCATG...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp GGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAAACTCTACACTATTGGTCCCGCTaGAGGGAGTCAGCAATCAAG +
Preference number: 2 (lower is better)
Translates to: GVNMEAMEQRENKIFQTLHYWSR*RESAIK
Trigger: CTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTG...TAGAGTTTGGAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp GGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACTTCTATTTGAGTCTGGCTTaGGAGAAGAATGAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: GWLLLLEKQKSGPCLLNFYLSLA*EKNERL
Trigger: AAGCCTCTCATTCTTCTCCCAAGCCAGACTCAAATA...GAAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGGGTAAGAAATCTTTGTaGCTACTGGCATCTACAGAT +
Preference number: 2 (lower is better)
Translates to: VFQVTRATHSKASHLIPQGKKSL*LLASTD
Trigger: ATCTGTAGATGCCAGTAGTCACAAAGATTTCTTACC...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCGGTGGATATGCTGGGTaGCAAGAAGAGCATTTGCAG +
Preference number: 2 (lower is better)
Translates to: SWQTSKPIFYTMDDISESGGYAG*QEEHLQ
Trigger: CTGCAAATGCTCTTCTTGTCACCCAGCATATCCACC...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACGCACTTGCACAGAGATaGTCTCTGCCATCATTTCCG +
Preference number: 2 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNALAQR*SLPSFP
Trigger: CGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGC...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR TCA 90 bp AAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCGAAAAGCAAGCGACTaGGCCAGAGCTTCACTGCAT +
Preference number: 2 (lower is better)
Translates to: KETGVNMEAMEQRENKIFRKASD*ARASLH
Trigger: ATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCG...GAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp TACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCTCAGACAGACACTCCAAGGTGACACCTTaGGTCCCATCAGCAAAGTTT +
Preference number: 2 (lower is better)
Translates to: YELPNTQIKMATGTSDRHSKVTP*VPSAKF
Trigger: AAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGA...GTGTCTGTCTGAGGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGGGTCTGGTCATTTTaGGATGCTTGCAATTGCCAA +
Preference number: 2 (lower is better)
Translates to: EIWSLFTELLWISYYLQLRVWSF*DACNCQ
Trigger: TTGGCAATTGCAAGCATCTCAAAATGACCAGACCCT...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGCCCTCATTTTGAATaGGGCAAGTCAGCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: EIWSLFTELLWISYYLQLSPHFE*GKSAFL
Trigger: AAGAAAGGCTGACTTGCCTCATTCAAAATGAGGGCT...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp GTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTTAAAGAGGGAGGACATAAGGTaGTTGTGGCTTCACGGAGTT +
Preference number: 2 (lower is better)
Translates to: VNKHNLTLGHMRIITDLKREDIR*LWLHGV
Trigger: AACTCCGTGAAGCCACAAGCACCTTATGTCCTCCCT...CTTTAAATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGTCTCTAAACTTCCCGTaGCATAAGATAAGTAAACGT +
Preference number: 2 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMSLNFP*HKISKR
Trigger: ACGTTTACTTATCTTATGCCACGGGAAGTTTAGAGA...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
3UTR-3UTR CCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGATCAGTAACTCCCCATaGGCCTGCAATTTTCACCTT +
Preference number: 2 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQISNSP*ACNFHL
Trigger: AAGGTGAAAATTGCAGGCCCATGGGGAGTTACTGAT...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCAACTTCTCCACTTGCTaGGAGGGTATCATCTCTGGG +
Preference number: 2 (lower is better)
Translates to: SWQTSKPIFYTMDDISESNFSTC*EGIISG
Trigger: CCCAGAGATGATACCCTCCCAGCAAGTGGAGAAGTT...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCTCTTCAACCCTGATCTaGGTAGCCCCTTTAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SWQTSKPIFYTMDDISESSSTLI*VAPLAA
Trigger: AGCAGCTAAAGGGGCTACCCAGATCAGGGTTGAAGA...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGTGCAGGTGGATATGCTaGGTGACAAGAAGAGCATTT +
Preference number: 2 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQCRWIC*VTRRAF
Trigger: AAATGCTCTTCTTGTCACCCAGCATATCCACCTGCA...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CAA 90 bp GCCACATCTGTGCTGTGCCTAATGAAACAAACACTTAGAAGCTACTaGAAGCTCAATGTTAGCTCATTTGTGCATCATGTGGATGGTGGA +
Preference number: 2 (lower is better)
Translates to: ATSVLCLMKQTLRSY*KLNVSSFVHHVDGG
Trigger: TCCACCATCCACATGATGCACAAATGAGCTAACATTGAGCTTCAAGTAGCTTCTAAGTGTTTGTTTCATTAGGCACAGCACAGATGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR TCA 90 bp TCTAGTGCAAAATCTAGTACTTTAAATGCTCCCTTATCAGCAAGGGTTTCACATGTAGTGGGTCAAACATaGAAACCACTCCCTTGGCCC +
Preference number: 2 (lower is better)
Translates to: SSAKSSTLNAPLSARVSHVVGQT*KPLPWP
Trigger: GGGCCAAGGGAGTGGTTTTCATGTTTGACCCACTAC...ATGTGAAACCCTTGCTGATAAGGGAGCATTTAAAGTACTAGATTTTGCACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR TCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCATGAAGAGAAGCATGTaGTGTGAGAGAGCAATCAAG +
Preference number: 2 (lower is better)
Translates to: EIWSLFTELLWISYYLQLMKRSM*CERAIK
Trigger: CTTGATTGCTCTCTCACATCACATGCTTCTCTTCAT...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGTTCAGTATAATGAATTaGTCCACAGTTGAGCAGTCT +
Preference number: 2 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVFSIMN*STVEQS
Trigger: AGACTGCTCAACTGTGGAGCAATTCATTATACTGAA...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTTCTCTAAACTTCCCGTaGCATAAGATAAGTAAACGT +
Preference number: 2 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLASLNFP*HKISKR
Trigger: ACGTTTACTTATCTTATGCCACGGGAAGTTTAGAGA...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTCTCCTTCTTCTCAGTaGTCAGACTTTTCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDSPSSQ*SDFSVE
Trigger: TTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGA...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGATCTCCTTCTTCTCAGTaGTCAGACTTTTCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: NVMSEALPNQCSSLEESRSPSSQ*SDFSVE
Trigger: TTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGA...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTGTTTTGGATTTGATCTaGTGCTTTGGCATTCCTGAT +
Preference number: 2 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSVLDLI*CFGIPD
Trigger: ATCAGGAATGCCAAAGCACCAGATCAAATCCAAAAC...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CCA 90 bp AAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCGCTGGCTTCTTCTCCTaGAGAAGCAGAAATCTGGTC +
Preference number: 2 (lower is better)
Translates to: KETGVNMEAMEQRENKIFAGFFS*RSRNLV
Trigger: GACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGC...GAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp TGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAAACTCTAAGCTAGAGCCCTCATTTTaGATGAGGCAAGTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: CQYGSYGAEREQDIPNSKLEPSF*MRQVSL
Trigger: AAGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAG...CTTAGAGTTTGGAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR TCA 90 bp GGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAAACTCTACTCACAACATCCCTGTaGGGTAGGAAAACACTATTG +
Preference number: 2 (lower is better)
Translates to: GVNMEAMEQRENKIFQTLLTTSL*GRKTLL
Trigger: CAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAG...TAGAGTTTGGAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR GCA 90 bp AAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCTGGTCATTTTGAGATaGTTGCAATTGCCAACCCGG +
Preference number: 2 (lower is better)
Translates to: KETGVNMEAMEQRENKIFLVILR*LQLPTR
Trigger: CCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAG...GAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACATCAGTAACTCCCCATaGGCCTGCAATTTTCACCTT +
Preference number: 2 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNISNSP*ACNFHL
Trigger: AAGGTGAAAATTGCAGGCCCATGGGGAGTTACTGAT...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCATTTGTGCATCATGTaGATGGTGGACATATTTTCT +
Preference number: 2 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSHLCIM*MVDIFS
Trigger: AGAAAATATGTCCACCATCCACATGATGCACAAATG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR TCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGAACACTGCTGTTTCACTaGTTTTTGGCTTTTGCAAAT +
Preference number: 2 (lower is better)
Translates to: NVMSEALPNQCSSLEESRTLLFH*FLAFAN
Trigger: ATTTGCAAAAGCCAAAAATCAGTGAAACAGCAGTGT...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR TCA 90 bp TACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCTCAGACAGACACATGATTCAAAGGCCATaGGACAGCTTTCAAGTTTGT +
Preference number: 2 (lower is better)
Translates to: YELPNTQIKMATGTSDRHMIQRP*DSFQVC
Trigger: ACAAACTTGAAAGCTGTCTCATGGCCTTTGAATCAT...GTGTCTGTCTGAGGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR CAA 90 bp CTTTGTTCACTCAAACCCAAGCACAGAAAGAGTAGGCCTAAAGGCTaGTGTAGGCTATTTTTCCCTAGTTTTGTCATTTGGAAATTTGGA +
Preference number: 2 (lower is better)
Translates to: LCSLKPKHRKSRPKG*CRLFFPSFVIWKFG
Trigger: TCCAAATTTCCAAATGACAAAACTAGGGAAAAATAGCCTACACAAGCCTTTAGGCCTACTCTTTCTGTGCTTGGGTTTGAGTGAACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR TCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACTTAACAGAGAATCTGTaGACATGCCCAAAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNLTENL*TCPKEA
Trigger: TGCTTCTTTTGGGCATGTTCACAGATTCTCTGTTAA...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR TCA 90 bp CATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACACAGATATAGCCTTCAATGTGTaGCACTGTCAGCTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: HMRIITDLKAYNTIQNTDIAFNV*HCQLLG
Trigger: ACCCAGAAGCTGACAGTGTCACACATTGAAGGCTAT...ATCTGTGTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CCA 90 bp TCTAGTGCAAAATCTAGTACTTTAAATGCTCCCTTATCAGCAAGGGTTTCACATTGCAGGTGGATATGCTaGGTGACAAGAAGAGCATTT +
Preference number: 2 (lower is better)
Translates to: SSAKSSTLNAPLSARVSHCRWIC*VTRRAF
Trigger: AAATGCTCTTCTTGTCACCCAGCATATCCACCTGCA...ATGTGAAACCCTTGCTGATAAGGGAGCATTTAAAGTACTAGATTTTGCACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CAA 90 bp TTTACAATGTATTTCAACTTTCTGCCTTCAACTGCAGATAACTTTTaGTGCCATCCAAAGTGGGCAGAAATAAGGATTTCTGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: FTMYFNFLPSTADNF*CHPKWAEIRISACC
Trigger: ACAGCAGGCAGAAATCCTTATTTCTGCCCACTTTGGATGGCACAAAAAGTTATCTGCAGTTGAAGGCAGAAAGTTGAAATACATTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR GCA 90 bp CATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACACAGATTCCCAGAGTCATCCCTaGTTCATAACATTTCCGAAG +
Preference number: 2 (lower is better)
Translates to: HMRIITDLKAYNTIQNTDSQSHP*FITFPK
Trigger: CTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGA...ATCTGTGTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCCACTATTGGCCTCTTTaGGGATTTCTATATGTTTGT +
Preference number: 2 (lower is better)
Translates to: SWQTSKPIFYTMDDISESHYWPL*GFLYVC
Trigger: ACAAACATATAGAAATCCCCAAAGAGGCCAATAGTG...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CCA 90 bp CAAAAAGCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACCGAAGACGACAAGATaGACAATTTTTCCTTCGGAA +
Preference number: 2 (lower is better)
Translates to: QKALCQCQATLQETIIMIPKTTR*TIFPSE
Trigger: TTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGG...TATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGCTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CCA 90 bp TTTCAATCCACATTAGGGAACTTCTTGTTGGTCTGGAGATTAAAATTCTGCCCTAACTTCTTGTTGGTCTaGAGATTAAAATTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: FQSTLGNFLLVWRLKFCPNFLLV*RLKFCP
Trigger: AGGGCAGAATTTTAATCTCCAGACCAACAAGAAGTT...AGGGCAGAATTTTAATCTCCAGACCAACAAGAAGTTCCCTAATGTGGATTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 90 bp ATTACTCATCTTAGGTTCCCCTCTCCCTTGTTATTTAAAGCTGTTTaGAAGTTCGTTTGGCTATTAATATCAATGCAGAAATCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: ITHLRFPSPLLFKAV*KFVWLLISMQKSGK
Trigger: CTTCCCTGATTTCTGCATTGATATTAATAGCCAAACGAACTTCAAAACAGCTTTAAATAACAAGGGAGAGGGGAACCTAAGATGAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CCA 90 bp TCTAGTGCAAAATCTAGTACTTTAAATGCTCCCTTATCAGCAAGGGTTTCACATAATCTTTGTGACTACTaGCATCTACAGATAGATGTC +
Preference number: 2 (lower is better)
Translates to: SSAKSSTLNAPLSARVSHNLCDY*HLQIDV
Trigger: GACATCTATCTGTAGATGCCAGTAGTCACAAAGATT...ATGTGAAACCCTTGCTGATAAGGGAGCATTTAAAGTACTAGATTTTGCACTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 72 bp ACAGTTGAGCAGTCTAGCCCCCAGGGACCAAGGCTGTaGGCAGGTACTGATGCTCCATTGCCCTCCTTGTCC +
Preference number: 3 (lower is better)
Translates to: TVEQSSPQGPRL*AGTDAPLPSLS
Trigger: GGACAAGGAGGGCAATGGAGCATCAGTACCTGCCCACAGCCTTGGTCCCTGGGGGCTAGACTGCTCAACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp ACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATAGGTAGGAAAACACTATaGGTCCCGCTGGAGGGAGTC +
Preference number: 3 (lower is better)
Translates to: TEPELHCIRLSQCLAPIIGRKTL*VPLEGV
Trigger: GACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACC...TATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR GCA 72 bp CACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTaGATCCGCCTGAGTCAGTGCCTGGCCCCCATCATA +
Preference number: 3 (lower is better)
Translates to: HHEKQATEPELH*IRLSQCLAPII
Trigger: TATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 72 bp GTCAGCTCAGAGGCTGGGCCTAGGCGAGCTGCCCAATaGACGAGAGCTGAAACTGCCACACGACTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: VSSEAGPRRAAQ*TRAETATRLFS
Trigger: AGAAAAGAGTCGTGTGGCAGTTTCAGCTCTCGTTCATTGGGCAGCTCGCCTAGGCCCAGCCTCTGAGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR TCA 72 bp AGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTaGGTCAGTGCCTGGCCCCCATCATATGTGATCAAG +
Preference number: 3 (lower is better)
Translates to: SKRLSQSFTASA*VSAWPPSYVIK
Trigger: CTTGATCACATATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CCA 72 bp TTGAGGCTAGAGAGCAAGGCTGCAAAGGAGTCGGGCTaGTTGTTGTCGTGTCCAGCACACACTACACCTGGC +
Preference number: 3 (lower is better)
Translates to: LRLESKAAKESG*LLSCPAHTTPG
Trigger: GCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CAA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGAAAACCACTCCCTaGGCCCAGTGCCCTCTCACC +
Preference number: 3 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRMKTTP*AQCPLT
Trigger: GGTGAGAGGGCACTGGGCCAAGGGAGTGGTTTTCAT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp CTGGCTGTACATCCGGGACTTGTGCATGCGGTACTCATTGAAAACCAGATCAGGAAGCCAGGCAAGGCCTaGGCCCACTTGACCACGTGT +
Preference number: 3 (lower is better)
Translates to: LAVHPGLVHAVLIENQIRKPGKA*AHLTTC
Trigger: ACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTT...CCTGATCTGGTTTTCAATGAGTACCGCATGCACAAGTCCCGGATGTACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR TCA 72 bp GTAAGTTGCGGAAGCCAGGCAAGGCCTTGGCCCACTTaGCCACGTGTACAAGCTGTCTCTCTCCCAGTTCAT +
Preference number: 3 (lower is better)
Translates to: VSCGSQARPWPT*PRVQAVSLPVH
Trigger: ATGAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCGCAACTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR GCA 72 bp TCTCTCTCCCAGTTCATTGAGGCTAGAGAGCAAGGCTaGAAAGGAGTCGGGCTGGTTGTTGTCGTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: SLSQFIEAREQG*KGVGLVVVVSS
Trigger: GCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAATGAACTGGGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CCA 72 bp CCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTaGAGCCACACCAACCAGACCTTTCCGAAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: PGHTLSSWVAKY*SHTNQTFPKEA
Trigger: GGCTTCTTTCGGAAAGGTCTGGTTGGTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp CGGAAGCCAGGCAAGGCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTGTAAACAAGCACAACTaGACACTGGGCCATATGAGG +
Preference number: 3 (lower is better)
Translates to: RKPGKALAHLTTCTSCLSVNKHN*TLGHMR
Trigger: CCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC...AGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CAA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGAGAGGACATAAGGTGCTaGTGGCTTCACGGAGTTTGG +
Preference number: 3 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGEDIRC*WLHGVW
Trigger: CCAAACTCCGTGAAGCCACAAGCACCTTATGTCCTC...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR GCA 72 bp TCAGCCTCTTATTTTTCCAGGGCTATGCAGGGGCCATaGTCGGGTAGTTACTGGGCTGTCTGGAGAGAGTCT +
Preference number: 3 (lower is better)
Translates to: SASYFSRAMQGP*SGSYWAVWRES
Trigger: AGACTCTCTCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAATAAGAGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 72 bp GGGCTGGTTGTTGTCGTGTCCAGCACACACTACACCTaGCTCAATGGCTTCCAGGACATTCAGAAAGATGGG +
Preference number: 3 (lower is better)
Translates to: GLVVVVSSTHYT*LNGFQDIQKDG
Trigger: CCCATCTTTCTGAATGTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CCA 72 bp CATCCCTGTGAGGTAGGAAAACACTATTGGTCCCGCTaGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAAC +
Preference number: 3 (lower is better)
Translates to: HPCEVGKHYWSR*RESAIKRVAPN
Trigger: GTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CCA 72 bp GGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTaGCAGCACACCACGAAAAGCAAGCGACTGAGCCAG +
Preference number: 3 (lower is better)
Translates to: GDTLSPISKVSS*QHTTKSKRLSQ
Trigger: CTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGATGCCTTCTTTCCAGTTaGTCTAAGGGCTCCAGCGAT +
Preference number: 3 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGCLLSS*SKGSSD
Trigger: ATCGCTGGAGCCCTTAGACAAACTGGAAAGAAGGCA...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCGGCAAGACGCCCAGCTaGCCTGATCCCTTTGATGCC +
Preference number: 3 (lower is better)
Translates to: GICVKDRALAPGSNAGNCGKTPS*PDPFDA
Trigger: GGCATCAAAGGGATCAGGCAAGCTGGGCGTCTTGCC...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp ATTGGTGAAGGATCGCCAGCCCATGGCAAACACCATGAGCCCCATCCAGGAGTACCTTCAGCGGCTCTTTaGAAGAAGACCTTGCAGCTT +
Preference number: 3 (lower is better)
Translates to: IGEGSPAHGKHHEPHPGVPSAAL*KKTLQL
Trigger: AAGCTGCAAGGTCTTCTTCAAAAGAGCCGCTGAAGG...TACTCCTGGATGGGGCTCATGGTGTTTGCCATGGGCTGGCGATCCTTCACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR GCA 72 bp TATCATCTCTGGGGGACAAGGGCAAGACGCCCAGCTTaGCTGATCCCTTTGATGCCTTCTTTCCAGTTTGTC +
Preference number: 3 (lower is better)
Translates to: YHLWGTRARRPA*LIPLMPSFQFV
Trigger: GACAAACTGGAAAGAAGGCATCAAAGGGATCAGGCAAGCTGGGCGTCTTGCCCTTGTCCCCCAGAGATGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 72 bp ACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTaGCTGGCCCCCATCATATGTGATCAAGAACAATCA +
Preference number: 3 (lower is better)
Translates to: TEPELHCIRLSQ*LAPIICDQEQS
Trigger: TGATTGTTCTTGATCACATATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACAAGAAGCAAACAGGCTaGATGACCATGGCTGAAATG +
Preference number: 3 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHKKQTG*MTMAEM
Trigger: CATTTCAGCCATGGTCATCAAGCCTGTTTGCTTCTT...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp CAGGGCCTGAGGCTAAGATCTAGGTCACTGGCTGGGATCCAGAAGGCTAGAACCACGTCAAAGTCTGTGTaGAGGAGCAAAAACCTAAGC +
Preference number: 3 (lower is better)
Translates to: QGLRLRSRSLAGIQKARTTSKSV*RSKNLS
Trigger: GCTTAGGTTTTTGCTCCTCAACACAGACTTTGACGT...GGTTCTAGCCTTCTGGATCCCAGCCAGTGACCTAGATCTTAGCCTCAGGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGGGTACTGATGCTCCATaGCCCTCCTTGTCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: VFQVTRATHSKASHLIPQGTDAP*PSLSSP
Trigger: AGGAGAGGACAAGGAGGGCAATGGAGCATCAGTACC...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp GGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACTTCGGTAGGAAAACACTATaGGTCCCGCTGGAGGGAGTC +
Preference number: 3 (lower is better)
Translates to: GWLLLLEKQKSGPCLLNFGRKTL*VPLEGV
Trigger: GACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACC...GAAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp GCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAATCAAAAAGCACTTaGCCAATGCCAAGCCACATT +
Preference number: 3 (lower is better)
Translates to: AHHEKQATEPELHCIRLSQSKST*PMPSHI
Trigger: AATGTGGCTTGGCATTGGCAAAGTGCTTTTTGATTG...ACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp CCTGAAGTCCTTCCTTGGCTTTTCTCCAGAATGTTGCTGAGTCAGGGGAAAGAGAGTCTCTCAGTGTGTTaGAAGAGAGGGGTTGGCTGG +
Preference number: 3 (lower is better)
Translates to: PEVLPWLFSRMLLSQGKESLSVC*KRGVGW
Trigger: CCAGCCAACCCCTCTCTTCAAACACACTGAGAGACT...CTCTTTCCCCTGACTCAGCAACATTCTGGAGAAAAGCCAAGGAAGGACTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 72 bp CTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTaGGGTAGGAAAACACTATTGGTCCCGCTGGAGGGA +
Preference number: 3 (lower is better)
Translates to: LLLLQPVLTTSL*GRKTLLVPLEG
Trigger: TCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR GCA 72 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTaGCCTTCTCTCACAAGGATGGTGAAGACCAAGGAA +
Preference number: 3 (lower is better)
Translates to: DRALAPGSNAGN*PSLTRMVKTKE
Trigger: TTCCTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 72 bp GGAGCCACACCAACCAGACCTTTCCGAAAGAAGCCATaGTTCTGTAGAAAGTCTCAATGGTTTGGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: GATPTRPFRKKP*FCRKSQWFGLP
Trigger: AGGGAGGCCAAACCATTGAGACTTTCTACAGAACCATGGCTTCTTTCGGAAAGGTCTGGTTGGTGTGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGGCTCCATTGCCCTCCTaGTCCTCTCCTCTCTGTCCA +
Preference number: 3 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQAPLPS*SSPLCP
Trigger: TGGACAGAGAGGAGAGGACAAGGAGGGCAATGGAGC...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp AAATTCTGCCCTGAGAAGGGGGAAACTCCCCTCCTGAAGTCCTTCCTTGGCTTTTCTAGAGCCCTCATTTaGAATGAGGCAAGTCAGCCT +
Preference number: 3 (lower is better)
Translates to: KFCPEKGETPLLKSFLGFSRALI*NEASQP
Trigger: AGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAGA...AAAGCCAAGGAAGGACTTCAGGAGGGGAGTTTCCCCCTTCTCAGGGCAGAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 72 bp CAGCTAAGTGGGTCTGAGTGGCCAGTCCCTCACAGGTaGGTACAGTATACCAACCATACCAACTCTGTTTGT +
Preference number: 3 (lower is better)
Translates to: QLSGSEWPVPHR*VQYTNHTNSVC
Trigger: ACAAACAGAGTTGGTATGGTTGGTATACTGTACTCACCTGTGAGGGACTGGCCACTCAGACCCACTTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR TCA 72 bp ACCATGTGTGACTTGATTAGCAGGTCAAAAGTGAACTaGTGCAGCTCTCTCGCAATAGGCTGCACGGAGTCC +
Preference number: 3 (lower is better)
Translates to: TMCDLISRSKVN*CSSLAIGCTES
Trigger: GGACTCCGTGCAGCCTATTGCGAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAATCAAGTCACACATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR TCA 72 bp GACAGACACAGTTGCTTCTTGTCCAAGGTGACACCTTaGGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACA +
Preference number: 3 (lower is better)
Translates to: DRHSCFLSKVTP*VPSAKFLPGST
Trigger: TGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAACTGTGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR GCA 72 bp CTGCAGGTGGATATGCTGGGTGACAAGAAGAGCATTTaGAGGGTTTCTGGTTCTAGTGCCTTCATTCTTCCC +
Preference number: 3 (lower is better)
Translates to: LQVDMLGDKKSI*RVSGSSAFILP
Trigger: GGGAAGAATGAAGGCACTAGAACCAGAAACCCTGCAAATGCTCTTCTTGTCACCCAGCATATCCACCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 72 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTaGCATCATTTCCGGAAAGTCCACGCTCACCATGTG +
Preference number: 3 (lower is better)
Translates to: RKDLGHLHRDDL*HHFRKVHAHHV
Trigger: CACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
3UTR CCA 72 bp TGGTCAATCACTTGGGTAGGCTTTTGGCCCCAAGTTTaGGCCTTCCCTGTGGTAAATCTCAGTCAGTTCCAT +
Preference number: 3 (lower is better)
Translates to: WSITWVGFWPQV*AFPVVNLSQFH
Trigger: ATGGAACTGACTGAGATTTACCACAGGGAAGGCCCAAACTTGGGGCCAAAAGCCTACCCAAGTGATTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 72 bp TGTAGTCTCTCAGTGTGTTTGAAGAGAGGGGTTGGCTaGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCT +
Preference number: 3 (lower is better)
Translates to: CSLSVCLKRGVG*LLLLEKQKSGP
Trigger: AGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACCCCTCTCTTCAAACACACTGAGAGACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGGGAAGTCGCCAAGTTTaGGCTGAAGAGAACATTCAG +
Preference number: 3 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMGSRQV*AEENIQ
Trigger: CTGAATGTTCTCTTCAGCCAAAACTTGGCGACTTCC...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTGAGGACATAAGGTGCTaGTGGCTTCACGGAGTTTGG +
Preference number: 3 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSEDIRC*WLHGVW
Trigger: CCAAACTCCGTGAAGCCACAAGCACCTTATGTCCTC...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCGGTGGACATTTTCCCTaGCACTTGGGCTTGAAGAAC +
Preference number: 3 (lower is better)
Translates to: GICVKDRALAPGSNAGNCGGHFP*HLGLKN
Trigger: GTTCTTCAAGCCCAAGTGCAAGGGAAAATGTCCACC...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCTTTTGGCCCCAAGTTaGGGCCTTCCCTGTGGTAAA +
Preference number: 3 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSLLAPS*GLPCGK
Trigger: TTTACCACAGGGAAGGCCCAAACTTGGGGCCAAAAG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACTCGTCCACGTGTAAGTaGCGGAAGCCAGGCAAGGCC +
Preference number: 3 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNSSTCK*RKPGKA
Trigger: GGCCTTGCCTGGCTTCCGCAACTTACACGTGGACGA...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CAA 90 bp GAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTATCTAGAGCCCTCATTTaGAATGAGGCAAGTCAGCCT +
Preference number: 3 (lower is better)
Translates to: EVGKHYWSRWRESAIKRVSRALI*NEASQP
Trigger: AGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAGA...TACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGCTCAGACAGACACAGTaGCTTCTTGTCCAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: CGYSKARCKRESRTVVSQLRQTQ*LLVQGD
Trigger: GTCACCTTGGACAAGAAGCAACTGTGTCTGTCTGAG...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp ATCAAGAGAGTAGCCCCCAACCCCAACGTCAAAGTCTGTGTTGAGGAGCAAAAACTCAGACAGACACAGTaGCTTCTTGTCCAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: IKRVAPNPNVKVCVEEQKLRQTQ*LLVQGD
Trigger: GTCACCTTGGACAAGAAGCAACTGTGTCTGTCTGAG...TTTTTGCTCCTCAACACAGACTTTGACGTTGGGGTTGGGGGCTACTCTCTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp TTGCTTCTTGTCCAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGTTTCTGTCAGTCCCATaGGTGCTGCCATGCAGTATG +
Preference number: 3 (lower is better)
Translates to: LLLVQGDTLSPISKVSSWFLSVP*VLPCSM
Trigger: CATACTGCATGGCAGCACCAATGGGACTGACAGAAA...CCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR-3UTR CAA 90 bp AAATTCTGCCCTGAGAAGGGGGAAACTCCCCTCCTGAAGTCCTTCCTTGGCTTTGTCATTTTGAGATGCTaGCAATTGCCAACCCGGAAT +
Preference number: 3 (lower is better)
Translates to: KFCPEKGETPLLKSFLGFVILRC*QLPTRN
Trigger: ATTCCGGGTTGGCAATTGCAAGCATCTCAAAATGAC...AAAGCCAAGGAAGGACTTCAGGAGGGGAGTTTCCCCCTTCTCAGGGCAGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR TCA 72 bp ACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTGTaGAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAG +
Preference number: 3 (lower is better)
Translates to: TRAPQSQVREFV*KIERLLQVPMQ
Trigger: CTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR TCA 72 bp TTCCAATGCTTCACTGGGTGTGGAAATAGATGGGCTTaGCTTTCCCAGAAAGGATCTTGGGCACTTGCACAG +
Preference number: 3 (lower is better)
Translates to: FQCFTGCGNRWA*LSQKGSWALAQ
Trigger: CTGTGCAAGTGCCCAAGATCCTTTCTGGGAAAGTCAAGCCCATCTATTTCCACACCCAGTGAAGCATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
3UTR TCA 72 bp GAACCTCAGACAGACACAGTTGCTTCTTGTCCAAGGTaGCACCTTGAGTCCCATCAGCAAAGTTTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: EPQTDTVASCPR*HLESHQQSFFL
Trigger: CAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAACTGTGTCTGTCTGAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR GCA 72 bp ATGGGCTTGACTTTCCCAGAAAGGATCTTGGGCACTTaGACAGAGATGATCTCTGCCATCATTTCCGGAAAG +
Preference number: 3 (lower is better)
Translates to: MGLTFPERILGT*TEMISAIISGK
Trigger: CTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGGAAAGTCAAGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
3UTR GCA 72 bp AAGTTTCTTCAGCTTCCGGGCTCCCAGAGTCATCCCTaGTTCATAACATTTCCGAAGACGACAAGATGGACA +
Preference number: 3 (lower is better)
Translates to: KFLQLPGSQSHP*FITFPKTTRWT
Trigger: TGTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGCCCGGAAGCTGAAGAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR CCA 72 bp CACCTGGCTCAATGGCTTCCAGGACATTCAGAAAGATaGGCTGACATTCATAGCCTTCAATGTGTGACACTG +
Preference number: 3 (lower is better)
Translates to: HLAQWLPGHSER*ADIHSLQCVTL
Trigger: CAGTGTCACACATTGAAGGCTATGAATGTCAGCCCATCTTTCTGAATGTCCTGGAAGCCATTGAGCCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CAA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGGTAAACAAGCACAACTaGACACTGGGCCATATGAGG +
Preference number: 3 (lower is better)
Translates to: VFQVTRATHSKASHLIPQVNKHN*TLGHMR
Trigger: CCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTGTAAACAAGCACAACTaGACACTGGGCCATATGAGG +
Preference number: 3 (lower is better)
Translates to: STQTPSNKSTSISGEGICVNKHN*TLGHMR
Trigger: CCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTACCTTCTCGTCACTATaGGCCTCTTTGGGGATTTCT +
Preference number: 3 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLATFSSL*ASLGIS
Trigger: AGAAATCCCCAAAGAGGCCAATAGTGACGAGAAGGT...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACAAGGAGTCGGGCTGGTaGTTGTCGTGTCCAGCACAC +
Preference number: 3 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNKESGW*LSCPAH
Trigger: GTGTGCTGGACACGACAACAACCAGCCCGACTCCTT...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CAA 90 bp ATCAAGAGAGTAGCCCCCAACCCCAACGTCAAAGTCTGTGTTGAGGAGCAAAAATCTAGAGCCCTCATTTaGAATGAGGCAAGTCAGCCT +
Preference number: 3 (lower is better)
Translates to: IKRVAPNPNVKVCVEEQKSRALI*NEASQP
Trigger: AGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAGA...TTTTTGCTCCTCAACACAGACTTTGACGTTGGGGTTGGGGGCTACTCTCTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp TGTGTTGAGGAGCAAAAACCTAAGCTCCTAAGCCTCAGACGCCAGGTTTCTCCAACGTCAAAGTCTGTGTaGAGGAGCAAAAACCTAAGC +
Preference number: 3 (lower is better)
Translates to: CVEEQKPKLLSLRRQVSPTSKSV*RSKNLS
Trigger: GCTTAGGTTTTTGCTCCTCAACACAGACTTTGACGT...TGGAGAAACCTGGCGTCTGAGGCTTAGGAGCTTAGGTTTTTGCTCCTCAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGGTGGCTTCACGGAGTTaGGCAGAAAACTTCATTCAG +
Preference number: 3 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVVASRS*AENFIQ
Trigger: CTGAATGAAGTTTTCTGCCAAACTCCGTGAAGCCAC...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGAAGAAGCAAACAGGCTaGATGACCATGGCTGAAATG +
Preference number: 3 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVKKQTG*MTMAEM
Trigger: CATTTCAGCCATGGTCATCAAGCCTGTTTGCTTCTT...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGCCCTTGCACTTGGGCTaGAAGAACGAAGTCAACAGA +
Preference number: 3 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQPLHLG*KNEVNR
Trigger: TCTGTTGACTTCGTTCTTCAAGCCCAAGTGCAAGGG...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCAGGGAAGGAAACCCTaGTGGATCATATCATGTCAC +
Preference number: 3 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSQGRKP*WIISCH
Trigger: GTGACATGATATGATCCACAAGGGTTTCCTTCCCTG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR TCA 72 bp AAATGCAGTGTGATGAAATTCAGGCCCACAAAACACTaGAGGGAGGACATAAGGTGCTTGTGGCTTCACGGA +
Preference number: 3 (lower is better)
Translates to: KCSVMKFRPTKH*REDIRCLWLHG
Trigger: TCCGTGAAGCCACAAGCACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR TCA 72 bp GAGGCAAGTCAGCCTTTCTTCAGGGTCTGGTCATTTTaGGATGCTTGCAATTGCCAACCCGGAATTTTTCTC +
Preference number: 3 (lower is better)
Translates to: EASQPFFRVWSF*DACNCQPGIFL
Trigger: GAGAAAAATTCCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAGACCCTGAAGAAAGGCTGACTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR GCA 72 bp CTAAATAGTCATAAAATGGGCTGGCATGAGGTCCACTaGATGCCAGCTGGCTCTGAAATTCTTGACTGTCTG +
Preference number: 3 (lower is better)
Translates to: LNSHKMGWHEVH*MPAGSEILDCL
Trigger: CAGACAGTCAAGAATTTCAGAGCCAGCTGGCATGCAGTGGACCTCATGCCAGCCCATTTTATGACTATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR CCA 72 bp AGGGAGGACATAAGGTGCTTGTGGCTTCACGGAGTTTaGCAGAAAACTTCATTCAGGTCTTTTAAAGGTGGG +
Preference number: 3 (lower is better)
Translates to: REDIRCLWLHGV*QKTSFRSFKGG
Trigger: CCCACCTTTAAAAGACCTGAATGAAGTTTTCTGCCAAACTCCGTGAAGCCACAAGCACCTTATGTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 72 bp CTTCTCTCTTCTCATGACTTCTGCAGGTGGATATGCTaGGTGACAAGAAGAGCATTTGCAGGGTTTCTGGTT +
Preference number: 3 (lower is better)
Translates to: LLSSHDFCRWIC*VTRRAFAGFLV
Trigger: AACCAGAAACCCTGCAAATGCTCTTCTTGTCACCCAGCATATCCACCTGCAGAAGTCATGAGAAGAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 72 bp TCTTTGTTCCTTCTCTCTTCTCATGACTTCTGCAGGTaGATATGCTGGGTGACAAGAAGAGCATTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: SLFLLSSHDFCR*ICWVTRRAFAG
Trigger: CCCTGCAAATGCTCTTCTTGTCACCCAGCATATCCACCTGCAGAAGTCATGAGAAGAGAGAAGGAACAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCAAGATAAGTAAACGTTaGTGTGGCTGGCACAGAGTA +
Preference number: 3 (lower is better)
Translates to: GICVKDRALAPGSNAGNCKISKR*CGWHRV
Trigger: TACTCTGTGCCAGCCACACAAACGTTTACTTATCTT...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATGGAAGTCGCCAAGTTTaGGCTGAAGAGAACATTCAG +
Preference number: 3 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDGSRQV*AEENIQ
Trigger: CTGAATGTTCTCTTCAGCCAAAACTTGGCGACTTCC...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCATGGGTGGCAAAGTATaGGAGCCACACCAACCAGAC +
Preference number: 3 (lower is better)
Translates to: SWQTSKPIFYTMDDISESMGGKV*EPHQPD
Trigger: GTCTGGTTGGTGTGGCTCCAATACTTTGCCACCCAT...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp TACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCTCAGACAGACACGTCCAAGGTGACACCTaGAGTCCCATCAGCAAAGTT +
Preference number: 3 (lower is better)
Translates to: YELPNTQIKMATGTSDRHVQGDT*SPISKV
Trigger: AACTTTGCTGATGGGACTCAAGGTGTCACCTTGGAC...GTGTCTGTCTGAGGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 72 bp GCCTTCTTTCCAGTTTGTCTAAGGGCTCCAGCGATCTaGGAGTTGGTAAGAAATCTTTGTGACTACTGGCAT +
Preference number: 3 (lower is better)
Translates to: AFFPVCLRAPAI*ELVRNLCDYWH
Trigger: ATGCCAGTAGTCACAAAGATTTCTTACCAACTCTCAGATCGCTGGAGCCCTTAGACAAACTGGAAAGAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR TCA 72 bp ACTGCATGCCAGCTGGCTCTGAAATTCTTGACTGTCTaGTGTTGCTCTGTGTCTTTCTTCATAGTCGTATCC +
Preference number: 3 (lower is better)
Translates to: TACQLALKFLTV*CCSVSFFIVVS
Trigger: GGATACGACTATGAAGAAAGACACAGAGCAACATCAGACAGTCAAGAATTTCAGAGCCAGCTGGCATGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR GCA 72 bp AGACTGTACATCAATAGAGGAAATTCCCCAAGGCACTaGAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: RLYINRGNSPRH*RGVVQSYNRQK
Trigger: CTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCTTGGGGAATTTCCTCTATTGATGTACAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
3UTR GCA 72 bp TGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTaGTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: WIQMGPYKGLNL*SPSSQWSDFSV
Trigger: CACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 72 bp ATTGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTaGTTCATAACATTTCCGAAGACGACAAGATGGACA +
Preference number: 3 (lower is better)
Translates to: IANPEFFSQSHP*FITFPKTTRWT
Trigger: TGTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR GCA 72 bp AAGTCAGCCTTTCTTCAGGGTCTGGTCATTTTGAGATaGTTGCAATTGCCAACCCGGAATTTTTCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: KSAFLQGLVILR*LQLPTRNFSPR
Trigger: TCTGGGAGAAAAATTCCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAGACCCTGAAGAAAGGCTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTACACGACTCTTTTCTTaGACTACAGAGTTCGTGATC +
Preference number: 3 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSTRLFS*TTEFVI
Trigger: GATCACGAACTCTGTAGTCAAAGAAAAGAGTCGTGT...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 72 bp TACAAAGGGTTAAATCTCTGCTCTCCTTCTTCTCAGTaGTCAGACTTTTCTGTGGAAGTCGCCAAGTTTTGG +
Preference number: 3 (lower is better)
Translates to: YKGLNLCSPSSQ*SDFSVEVAKFW
Trigger: CCAAAACTTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTTAACCCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CCA 72 bp GCCTTTCAATCCACATTAGGGAACTTCTTGTTGGTCTaGAGATTAAAATTCTGCCCTGAGAAGGGGGAAACT +
Preference number: 3 (lower is better)
Translates to: AFQSTLGNFLLV*RLKFCPEKGET
Trigger: AGTTTCCCCCTTCTCAGGGCAGAATTTTAATCTCCAGACCAACAAGAAGTTCCCTAATGTGGATTGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACACCTTCTCGTCACTATaGGCCTCTTTGGGGATTTCT +
Preference number: 3 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNTFSSL*ASLGIS
Trigger: AGAAATCCCCAAAGAGGCCAATAGTGACGAGAAGGT...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp CATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACACAGATTGCATGCGGTACTCATaGAAAACCAGATCAGGGGCG +
Preference number: 3 (lower is better)
Translates to: HMRIITDLKAYNTIQNTDCMRYS*KTRSGA
Trigger: CGCCCCTGATCTGGTTTTCAATGAGTACCGCATGCA...ATCTGTGTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CAA 90 bp GGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAAACTCTAGCAGAAATCTGGTCCTaGTTTACTGAACTTCTGTGG +
Preference number: 3 (lower is better)
Translates to: GVNMEAMEQRENKIFQTLAEIWS*FTELLW
Trigger: CCACAGAAGTTCAGTAAACAAGGACCAGATTTCTGC...TAGAGTTTGGAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCACATCAATACAATATTaGAGTCTGGCTTGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: EIWSLFTELLWISYYLQLTSIQY*SLAWEK
Trigger: CTTCTCCCAAGCCAGACTCAAATATTGTATTGATGT...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 72 bp TGGGCCTTCCCTGTGGTAAATCTCAGTCAGTTCCATTaGGTTTTTATGCTTTCCACATTCATCTGTCTTGAA +
Preference number: 3 (lower is better)
Translates to: WAFPVVNLSQFH*VFMLSTFICLE
Trigger: TTCAAGACAGATGAATGTGGAAAGCATAAAAACTCAATGGAACTGACTGAGATTTACCACAGGGAAGGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 72 bp TTCAACTTTCTGCCTTCAACTGCAGATAACTTTTTGTaGCATCCAAAGTGGGCAGAAATAAGGATTTCTGCC +
Preference number: 3 (lower is better)
Translates to: FNFLPSTADNFL*HPKWAEIRISA
Trigger: GGCAGAAATCCTTATTTCTGCCCACTTTGGATGGCACAAAAAGTTATCTGCAGTTGAAGGCAGAAAGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 72 bp TTAATCAAAGAAAAACACCCTACCTGTGGGCAGAAATaGACCTGCACCTACAGAGATACAACTTCTAGTACT +
Preference number: 3 (lower is better)
Translates to: LIKEKHPTCGQK*TCTYRDTTSST
Trigger: AGTACTAGAAGTTGTATCTCTGTAGGTGCAGGTCCATTTCTGCCCACAGGTAGGGTGTTTTTCTTTGATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp CATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACACAGATGCTGGTAGAAGCGTCTaGAGCAGGATGTGGGATTTT +
Preference number: 3 (lower is better)
Translates to: HMRIITDLKAYNTIQNTDAGRSV*SRMWDF
Trigger: AAAATCCCACATCCTGCTCAAGACGCTTCTACCAGC...ATCTGTGTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
3UTR-3UTR CAA 90 bp AAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCACGTCAAAGTCTGTGTaGAGGAGCAAAAACCTAAGC +
Preference number: 3 (lower is better)
Translates to: KETGVNMEAMEQRENKIFTSKSV*RSKNLS
Trigger: GCTTAGGTTTTTGCTCCTCAACACAGACTTTGACGT...GAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR-3UTR CAA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGACAGCTTTCAAGTTaGTTTCTCTGTAGGATTTCT +
Preference number: 3 (lower is better)
Translates to: EIWSLFTELLWISYYLQLRQLSS*FLCRIS
Trigger: AGAAATCCTACAGAGAAACAAACTTGAAAGCTGTCT...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
3UTR-3UTR CAA 90 bp GTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTTAAAGTCACTATTGGCCTCTTaGGGGATTTCTATATGTTTG +
Preference number: 3 (lower is better)
Translates to: VNKHNLTLGHMRIITDLKSLLAS*GISICL
Trigger: CAAACATATAGAAATCCCCAAAGAGGCCAATAGTGA...CTTTAAATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR-3UTR CAA 90 bp TCTAGTGCAAAATCTAGTACTTTAAATGCTCCCTTATCAGCAAGGGTTTCACATAGTAGGCCTAAAGGCTaGTGTAGGCTATTTTTCCCT +
Preference number: 3 (lower is better)
Translates to: SSAKSSTLNAPLSARVSHSRPKG*CRLFFP
Trigger: AGGGAAAAATAGCCTACACAAGCCTTTAGGCCTACT...ATGTGAAACCCTTGCTGATAAGGGAGCATTTAAAGTACTAGATTTTGCACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR-3UTR CAA 90 bp TCTAGTGCAAAATCTAGTACTTTAAATGCTCCCTTATCAGCAAGGGTTTCACATAAGATAAGTAAACGTTaGTGTGGCTGGCACAGAGTA +
Preference number: 3 (lower is better)
Translates to: SSAKSSTLNAPLSARVSHKISKR*CGWHRV
Trigger: TACTCTGTGCCAGCCACACAAACGTTTACTTATCTT...ATGTGAAACCCTTGCTGATAAGGGAGCATTTAAAGTACTAGATTTTGCACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CCA 72 bp CATCCCTGCTTCATAACATTTCCGAAGACGACAAGATaGACAATTTTTCCTTCGGAATTTATCAATAGTGCA +
Preference number: 3 (lower is better)
Translates to: HPCFITFPKTTR*TIFPSEFINSA
Trigger: TGCACTATTGATAAATTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396043.3
ENST00000514029.5
ENST00000613054.2
3UTR TCA 72 bp TTACAGGAAACAATAATCATGATACTCACAACTACATaGATGGTAACCACTATTACTTCTACAGCCCGTCCT +
Preference number: 3 (lower is better)
Translates to: LQETIIMILTTT*MVTTITSTARP
Trigger: AGGACGGGCTGTAGAAGTAATAGTGGTTACCATTCATGTAGTTGTGAGTATCATGATTATTGTTTCCTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR TCA 72 bp ACTTTCTGGCCAAATCAAATGAGGATAAATCAAAGCTaGGTCAAAAGCTGTTTTTACTATGAAACTCCACCT +
Preference number: 3 (lower is better)
Translates to: TFWPNQMRINQS*VKSCFYYETPP
Trigger: AGGTGGAGTTTCATAGTAAAAACAGCTTTTGACTCAGCTTTGATTTATCCTCATTTGATTTGGCCAGAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR TCA 72 bp CCATTGAGTTTTTATGCTTTCCACATTCATCTGTCTTaGACTAGTAAAGTACAATGTATCATGTCCTCTACT +
Preference number: 3 (lower is better)
Translates to: PLSFYAFHIHLS*TSKVQCIMSST
Trigger: AGTAGAGGACATGATACATTGTACTTTACTAGTTCAAGACAGATGAATGTGGAAAGCATAAAAACTCAATGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR GCA 72 bp TATGTGATCAAGAACAATCAAAAAGCACTTTGCCAATaGCAAGCCACATTACAGGAAACAATAATCATGATA +
Preference number: 3 (lower is better)
Translates to: YVIKNNQKALCQ*QATLQETIIMI
Trigger: TATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGCTTTTTGATTGTTCTTGATCACATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTCGCGGCCTCTGGGTaGCTGGGGCCCGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCLAASG*LGPGFW
Trigger: CCAGAACCCGGGCCCCAGGCACCCAGAGGCCGCGAG...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGGTGCTGGCAGCTGCTaGGGCAGCCCCTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHGAGSC*GSPLLA
Trigger: CGCCAGCAAGGGGCTGCCGCAGCAGCTGCCAGCACC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGGTGCTGGCAGCTGCTaGGGCAGCCCCTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNGAGSC*GSPLLA
Trigger: CGCCAGCAAGGGGCTGCCGCAGCAGCTGCCAGCACC...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CAGGGCCTGAGGCTAAGATCTAGGTCACTGGCTGGGATCCAGAAGGCTAGAACCGCTGCACCCGCGCCATaGAGGCTCGCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGLRLRSRSLAGIQKARTAAPAP*RLARSP
Trigger: TGGGGACCTGGCGAGCCTGCATGGCGCGGGTGCAGC...GGTTCTAGCCTTCTGGATCCCAGCCAGTGACCTAGATCTTAGCCTCAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCACGTGGATGGGGCAGCTaGGTCATCCTCGTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPRGWGS*VILVRR
Trigger: CCTCCGGACGAGGATGACTCAGCTGCCCCATCCACG...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp ACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATACGTGGATGGGGCAGCTaGGTCATCCTCGTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: TEPELHCIRLSQCLAPIIRGWGS*VILVRR
Trigger: CCTCCGGACGAGGATGACTCAGCTGCCCCATCCACG...TATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGACTGGCGCCGGGAGGTaGTGCGCTCGCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRTGAGR*CARGLW
Trigger: CCAGAGGCCGCGAGCGCAGCACCTCCCGGCGCCAGT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGCCGCCCAGGCGCTaGCGTAGTCCAGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AHHEKQATEPELHCIRLSQPPRR*RSPAGS
Trigger: AGAACCCGCTGGACTACGGCAGCGCCTGGGCGGCTG...ACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGTCTGGGGCCCGGGTTCTaGATCACTTCGCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: LVPLEGVSNQESSPQPQRLGPGF*ITSRTL
Trigger: GAGCGTGCGCGAAGTGATCCAGAACCCGGGCCCCAG...ACGTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCGGCCTCTGGGTGCCTaGGGCCCGGGTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCRPLGA*GPGSGS
Trigger: TGATCCAGAACCCGGGCCCCAGGCACCCAGAGGCCG...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGGCGGCTCCAGGCTCTaGGACGCAACCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHGGSRL*DATSLG
Trigger: CCCGAGAGAGGTTGCGTCCCAGAGCCTGGAGCCGCC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCGTGGATGGGGCAGCTaGGTCATCCTCGTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCRGWGS*VILVRR
Trigger: CCTCCGGACGAGGATGACTCAGCTGCCCCATCCACG...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCACTCTGTCGCCTCCTCTaGCTCTGGGCTTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPLCRLL*LWACSG
Trigger: TCCGGAGCAAGCCCAGAGGCAGAGGAGGCGACAGAG...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCGGTGCTGGCAGCTGCTaGGGCAGCCCCTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTGAGSC*GSPLLA
Trigger: CGCCAGCAAGGGGCTGCCGCAGCAGCTGCCAGCACC...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp AAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCGGTCAGCGGAGCAGCTaGTTAAGCCGGGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: KQATEPELHCIRLSQCLAGQRSS*LSRGKW
Trigger: CCACTTTCCCCGGCTTAAGCAGCTGCTCCGCTGACC...GGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCCCCGGAGCTCCCTGCTaGAGCGCTGCCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTPGAPC*SAARAA
Trigger: GGCTGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGG...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGACCCGGAGCTCCCTGCTaGAGCGCTGCCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRPGAPC*SAARAA
Trigger: GGCTGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGG...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CAGGGCCTGAGGCTAAGATCTAGGTCACTGGCTGGGATCCAGAAGGCTAGAACCTGTCCCGGAGCTCCCTaGTGCAGCGCTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QGLRLRSRSLAGIQKARTCPGAP*CSAARA
Trigger: TGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGGACA...GGTTCTAGCCTTCTGGATCCCAGCCAGTGACCTAGATCTTAGCCTCAGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGACAGCCGCCCAGGCGCTaGCGTAGTCCAGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGQPPRR*RSPAGS
Trigger: AGAACCCGCTGGACTACGGCAGCGCCTGGGCGGCTG...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp AAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCATGGGGCACAAGGAGTaGGACGCACAGCGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KQATEPELHCIRLSQCLAMGHKE*DAQRVE
Trigger: TTCCACCCGCTGTGCGTCCCACTCCTTGTGCCCCAT...GGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCAGCTTGATGCGAGCGTaGGGATGGGGAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCSLMRA*GWGGGG
Trigger: TCCGCCGCCTCCCCATCCCCACGCTCGCATCAAGCT...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATATGTGATCAAGTCGCTGCAGCTAGCTaGCCACCTGCGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELHCIRLSQCLAPIICDQVAAAS*PPAGSS
Trigger: GGAGCTTCCCGCAGGTGGGCAGCTAGCTGCAGCGAC...TTGATCACATATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCTCGCGGCCTCTGGGTaGCTGGGGCCCGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGLAASG*LGPGFW
Trigger: CCAGAACCCGGGCCCCAGGCACCCAGAGGCCGCGAG...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp CACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAACTGGCGCCGGGAGGTaGTGCGCTCGCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLESHQQSFFLAAHHEKQTGAGR*CARGLW
Trigger: CCAGAGGCCGCGAGCGCAGCACCTCCCGGCGCCAGT...TTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCATGCTGCTGCTGCTGCTaGCTGGGGCTAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPCCCCC*LGLVSC
Trigger: GCAAGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCA...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCTCACCCTGCTGCTGCTaGTGCTGCCTGGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: SLRRQVSPDYPLEPSRALSPCCC*CCLGLV
Trigger: GACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGA...GAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCTCCTCACCCTGCTGCTaGTGCTGCTGCCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SLRRQVSPDYPLEPSRALSSPCC*CCCLGL
Trigger: TAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGA...GAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCACACTCCAGGGCCGACTaGGGCTGTGAAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPHSRAD*GCEGCC
Trigger: ACAGCAACCTTCACAGCCGCAGTCGGCCCTGGAGTG...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGTTCCCCTGGACTCAGATaGTCCAACGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: LVPLEGVSNQESSPQPQRSPGLR*SNASTP
Trigger: GGGTGTGGAGGCGTTGGAGCATCTGAGTCCAGGGGA...ACGTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACTCCCTGCTGCAGCGCTaGCAGAGCAGCCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNSLLQR*QSSLGS
Trigger: AGAGCCTAGGCTGCTCTGGCAGCGCTGCAGCAGGGA...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGGCTGCACCCGCGCCATaGAGGCTCGCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRAAPAP*RLARSP
Trigger: TGGGGACCTGGCGAGCCTGCATGGCGCGGGTGCAGC...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTCCTCGGTAGGTCTTaGACGGCGGCCGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCLLGRS*TAAEGR
Trigger: TCTACCCTCGGCCGCCGTCCAAGACCTACCGAGGAG...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCGGCCTCTGGGTGCCTaGGGCCCGGGTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRRPLGA*GPGSGS
Trigger: TGATCCAGAACCCGGGCCCCAGGCACCCAGAGGCCG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCGGCGGCTCCAGGCTCTaGGACGCAACCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTGGSRL*DATSLG
Trigger: CCCGAGAGAGGTTGCGTCCCAGAGCCTGGAGCCGCC...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp CAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAGGCGGCTCCAGGCTCTaGGACGCAACCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: QHPCEVGKHYWSRWRESAGGSRL*DATSLG
Trigger: CCCGAGAGAGGTTGCGTCCCAGAGCCTGGAGCCGCC...TGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGGCGGCTCCAGGCTCTaGGACGCAACCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRGGSRL*DATSLG
Trigger: CCCGAGAGAGGTTGCGTCCCAGAGCCTGGAGCCGCC...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGGGACGCACAGCGGGTaGAACTCCCAAAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNGTHSG*NSQKWG
Trigger: GCCCCACTTTTGGGAGTTCCACCCGCTGTGCGTCCC...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGCTCGCGGCCTCTGGGTaGCTGGGGCCCGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVLAASG*LGPGFW
Trigger: CCAGAACCCGGGCCCCAGGCACCCAGAGGCCGCGAG...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGCTCGCGGCCTCTGGGTaGCTGGGGCCCGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: CGYSKARCKRESRTVVSQLAASG*LGPGFW
Trigger: CCAGAACCCGGGCCCCAGGCACCCAGAGGCCGCGAG...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCAACTGGCGCCGGGAGGTaGTGCGCTCGCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSTGAGR*CARGLW
Trigger: CCAGAGGCCGCGAGCGCAGCACCTCCCGGCGCCAGT...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGACTGGCGCCGGGAGGTaGTGCGCTCGCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERTGAGR*CARGLW
Trigger: CCAGAGGCCGCGAGCGCAGCACCTCCCGGCGCCAGT...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCATGCTGCTGCTGCTGCTaGTGCTGCAGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPCCCCC*CCSSSK
Trigger: TTTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCAGCA...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGTTGCTGCTGCTGCTGCTaGTGCTGCAGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LVPLEGVSNQESSPQPQRCCCCC*CCSSSK
Trigger: TTTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCAGCA...ACGTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGATCACCCTGCTGCTGCTaGTGCTGCCTGGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGSPCCC*CCLGLV
Trigger: GACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGA...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGAACCATCCTCACCCTaGTGCTGCTGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHEPSSP*CCCCCL
Trigger: CAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGGTTC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATCCTCGTCCGGAGGTaGTGGCAGCTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRILVRR*WQLLRQ
Trigger: CTGCCGCAGCAGCTGCCAGCACCTCCGGACGAGGAT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CAGGGCCTGAGGCTAAGATCTAGGTCACTGGCTGGGATCCAGAAGGCTAGAACCTCCCCTGGACTCAGATaGTCCAACGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: QGLRLRSRSLAGIQKARTSPGLR*SNASTP
Trigger: GGGTGTGGAGGCGTTGGAGCATCTGAGTCCAGGGGA...GGTTCTAGCCTTCTGGATCCCAGCCAGTGACCTAGATCTTAGCCTCAGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TGTGTTGAGGAGCAAAAACCTAAGCTCCTAAGCCTCAGACGCCAGGTTTCTCCACCCGGAGCTCCCTGCTaGAGCGCTGCCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CVEEQKPKLLSLRRQVSPPGAPC*SAARAA
Trigger: GGCTGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGG...TGGAGAAACCTGGCGTCTGAGGCTTAGGAGCTTAGGTTTTTGCTCCTCAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAGCTGTGAAGAGAGTGTaGCAGGATGAGGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPAVKRV*QDEEAA
Trigger: CGCCGCTTCCTCATCCTGGCACACTCTCTTCACAGC...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGTCGCTGGAGCCGGGCTaGGGCTGGCGTGGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERSLEPG*GWRGAS
Trigger: GGACGCACCACGCCAGCCCCAGCCCGGCTCCAGCGA...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGGCAGCAGCAGCAAACTaGCGCCGGGAGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRAAAAN*RREVLR
Trigger: GCGCAGCACCTCCCGGCGCCAGTTTGCTGCTGCTGC...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCGCAGCAGCAGCAAACTaGCGCCGGGAGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFAAAAN*RREVLR
Trigger: GCGCAGCACCTCCCGGCGCCAGTTTGCTGCTGCTGC...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCCAACCTCTCTCGGGGTaGCACTCCAGGGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTQPLSG*HSRADC
Trigger: GCAGTCGGCCCTGGAGTGCCACCCCGAGAGAGGTTG...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACTTAAGCCGGGGAAAGTaGGGCCCAGCAGGGACAACG +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHLSRGK*GPAGTT
Trigger: CGTTGTCCCTGCTGGGCCCCACTTTCCCCGGCTTAA...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp GGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCGGGACGCACAGCGGGTaGAACTCCCAAAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GKHYWSRWRESAIKRVAPGTHSG*NSQKWG
Trigger: GCCCCACTTTTGGGAGTTCCACCCGCTGTGCGTCCC...GGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGAGCTTGATGCGAGCGTaGGGATGGGGAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRSLMRA*GWGGGG
Trigger: TCCGCCGCCTCCCCATCCCCACGCTCGCATCAAGCT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCATTGCGTGGGTCATTCTaGTGGTGGCTGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPLRGSF*WWLLSA
Trigger: TGCTGACAGCAGCCACCATCAGAATGACCCACGCAA...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGTTCACTGCATCCGCCTaGGTCAGTGCCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QGDTLSPISKVSSWQHTTFTASA*VSAWPP
Trigger: TGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAA...CGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCGTCGCTGCAGCTAGCTaGCCACCTGCGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFVAAAS*PPAGSS
Trigger: GGAGCTTCCCGCAGGTGGGCAGCTAGCTGCAGCGAC...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAACTGGCGCCGGGAGGTaGTGCGCTCGCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NGNHYYFYSPSSQHPCEVTGAGR*CARGLW
Trigger: CCAGAGGCCGCGAGCGCAGCACCTCCCGGCGCCAGT...TACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGATCACCCTGCTGCTGCTaGTGCTGCCTGGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRSPCCC*CCLGLV
Trigger: GACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGA...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGGGTGCTGGCAGCTGCTaGGGCAGCCCCTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PCLLNFCGSATTFSSVTGGAGSC*GSPLLA
Trigger: CGCCAGCAAGGGGCTGCCGCAGCAGCTGCCAGCACC...CCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGATCCTCGTCCGGAGGTaGTGGCAGCTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRILVRR*WQLLRQ
Trigger: CTGCCGCAGCAGCTGCCAGCACCTCCGGACGAGGAT...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp AAATTCTGCCCTGAGAAGGGGGAAACTCCCCTCCTGAAGTCCTTCCTTGGCTTTATCCTCGTCCGGAGGTaGTGGCAGCTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KFCPEKGETPLLKSFLGFILVRR*WQLLRQ
Trigger: CTGCCGCAGCAGCTGCCAGCACCTCCGGACGAGGAT...AAAGCCAAGGAAGGACTTCAGGAGGGGAGTTTCCCCCTTCTCAGGGCAGAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCATTTTGAATGAGGCACCCGGAGCTCCCTGCTaGAGCGCTGCCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSPDYPLEPSRALILNEAPGAPC*SAARAA
Trigger: GGCTGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGG...TGCCTCATTCAAAATGAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCAGCCGCCCAGGCGCTaGCGTAGTCCAGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGQPPRR*RSPAGS
Trigger: AGAACCCGCTGGACTACGGCAGCGCCTGGGCGGCTG...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp CCTGAAGTCCTTCCTTGGCTTTTCTCCAGAATGTTGCTGAGTCAGGGGAAAGAGCAGCCGCCCAGGCGCTaGCGTAGTCCAGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PEVLPWLFSRMLLSQGKEQPPRR*RSPAGS
Trigger: AGAACCCGCTGGACTACGGCAGCGCCTGGGCGGCTG...CTCTTTCCCCTGACTCAGCAACATTCTGGAGAAAAGCCAAGGAAGGACTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCAGCTGCACCCGCGCCATaGAGGCTCGCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSAAPAP*RLARSP
Trigger: TGGGGACCTGGCGAGCCTGCATGGCGCGGGTGCAGC...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp GTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCATTTTGAATGAGGCAGCTGCACCCGCGCCATaGAGGCTCGCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VSPDYPLEPSRALILNEAAAPAP*RLARSP
Trigger: TGGGGACCTGGCGAGCCTGCATGGCGCGGGTGCAGC...TGCCTCATTCAAAATGAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGCACTCTGCTCACCATaGCGCCAGGGTACCACACAT +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNALCSP*RQGTTH
Trigger: ATGTGTGGTACCCTGGCGGCATGGTGAGCAGAGTGC...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTGAGCCAGAGCTTCACTaGATCCGCCTGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: AHHEKQATEPELHCIRLSEPELH*IRLSQC
Trigger: GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTC...ACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGGCTCTCCCAGCAAGCTaGCTCCCCGGGATCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKALPAS*LPGISE
Trigger: CTCCGAGATCCCGGGGAGCCAGCTTGCTGGGAGAGC...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCGCCTCCTCTGCCTCTaGGCTTGCTCCGGACCGTCC +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMRLLCL*ACSGPS
Trigger: GGACGGTCCGGAGCAAGCCCAGAGGCAGAGGAGGCG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGGGCTGGGGCTGGCGTaGTGCGTCCCTTCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAGLGLA*CVPSAP
Trigger: AGGAGCCGAAGGGACGCACCACGCCAGCCCCAGCCC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCATCATCTTTTGATCTCTaGCTCCGCACTCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPSSFDL*LRTRGG
Trigger: CCCACCCCGAGTGCGGAGCCAGAGATCAAAAGATGA...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGCTGGGGCCCGGGTTCTaGATCACTTCGCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRLGPGF*ITSRTL
Trigger: GAGCGTGCGCGAAGTGATCCAGAACCCGGGCCCCAG...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp CAGGGCCTGAGGCTAAGATCTAGGTCACTGGCTGGGATCCAGAAGGCTAGAACCCCTCTACGATGGGCTTaGGGAGAACCATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: QGLRLRSRSLAGIQKARTPLRWA*GEPSSP
Trigger: GGGTGAGGATGGTTCTCCCCAAGCCCATCGTAGAGG...GGTTCTAGCCTTCTGGATCCCAGCCAGTGACCTAGATCTTAGCCTCAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCGGACCAGGTAGCCTGTaGGGCCTCTACGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: GKHYWSRWRESAIKRVAPGPGSL*GLYDGL
Trigger: AAGCCCATCGTAGAGGCCCCACAGGCTACCTGGTCC...GGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAGCTTGATGCGAGCGTaGGGATGGGGAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRSLMRA*GWGGGG
Trigger: TCCGCCGCCTCCCCATCCCCACGCTCGCATCAAGCT...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp CGGAAGCCAGGCAAGGCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTGCAAAGGAGTCGGGCTaGTTGTTGTCGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKPGKALAHLTTCTSCLSAKESG*LLSCPA
Trigger: TGCTGGACACGACAACAACCAGCCCGACTCCTTTGC...AGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCACCATTAGGGGGCCACTaGTCAATCACTTGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPPLGGH*SITWVG
Trigger: GCCTACCCAAGTGATTGACCAGTGGCCCCCTAATGG...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCGTGGATGGGGCAGCTaGGTCATCCTCGTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGRGWGS*VILVRR
Trigger: CCTCCGGACGAGGATGACTCAGCTGCCCCATCCACG...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp TTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCGCGGGTTCTCCAGCTTaGTGCGAGCGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: FYSPSSQHPCEVGKHYWSAGSPA*CERGDG
Trigger: CCCATCCCCACGCTCGCATCAAGCTGGAGAACCCGC...GGACCAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGTCGAAAAGCAAGCGACTaGGCCAGAGCTTCACTGCAT +
Preference number: 4 (lower is better)
Translates to: LVPLEGVSNQESSPQPQRRKASD*ARASLH
Trigger: ATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCG...ACGTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGCAGGCGGGTCGTGGCTaGAGTGCTGAAGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVQAGRG*SAEAAP
Trigger: GGGAGCGGCTTCAGCACTGCAGCCACGACCCGCCTG...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGAGGGTTCTCTCCGCGTaGAGCCTAACCAGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKRVLSA*SLTRRV
Trigger: GACCCGCCTGGTTAGGCTGCACGCGGAGAGAACCCT...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCAGAGAAGGAAACTTaGGGGAGCAACCACGCAAAA +
Preference number: 4 (lower is better)
Translates to: KQATEPELHCIRLSQCLAPEKET*GSNHAK
Trigger: TTTTGCGTGGTTGCTCCCGCAAGTTTCCTTCTCTGG...GGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCCTCGCGGCCTCTGGGTaGCTGGGGCCCGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: EIWSLFTELLWISYYLQLLAASG*LGPGFW
Trigger: CCAGAACCCGGGCCCCAGGCACCCAGAGGCCGCGAG...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCACTAGCAGAGAACCTTTaGATTCGGCCAATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPLAENL*IRPMGH
Trigger: GTGCCCCATTGGCCGAATGCAAAGGTTCTCTGCTAG...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCCCGGAGCTCCCTGCTaGAGCGCTGCCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSPGAPC*SAARAA
Trigger: GGCTGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGCAGCCGCCCAGGCGCTaGCGTAGTCCAGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CGYSKARCKRESRTVVSQQPPRR*RSPAGS
Trigger: AGAACCCGCTGGACTACGGCAGCGCCTGGGCGGCTG...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp ATGAATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGGCTGCACCCGCGCCATaGAGGCTCGCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: MNGNHYYFYSPSSQHPCEAAPAP*RLARSP
Trigger: TGGGGACCTGGCGAGCCTGCATGGCGCGGGTGCAGC...CTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTGCTGCACCCGCGCCATaGAGGCTCGCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSAAPAP*RLARSP
Trigger: TGGGGACCTGGCGAGCCTGCATGGCGCGGGTGCAGC...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGAGAACCGGGTCCCGCTaGACCCGCGCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERRTGSR*TRAMQA
Trigger: AGCCTGCATGGCGCGGGTGCAGCGGGACCCGGTTCT...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATAGAACCGGGTCCCGCTaGACCCGCGCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHRTGSR*TRAMQA
Trigger: AGCCTGCATGGCGCGGGTGCAGCGGGACCCGGTTCT...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGAGAACCGGGTCCCGCTaGACCCGCGCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQRTGSR*TRAMQA
Trigger: AGCCTGCATGGCGCGGGTGCAGCGGGACCCGGTTCT...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTAGAACCGGGTCCCGCTaGACCCGCGCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPRTGSR*TRAMQA
Trigger: AGCCTGCATGGCGCGGGTGCAGCGGGACCCGGTTCT...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGTGGGATAGGGCACTCTaGTCACCATGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRWDRAL*SPCRQG
Trigger: ACCCTGGCGGCATGGTGAGCAGAGTGCCCTATCCCA...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGTCGCTGGAGCCGGGCTaGGGCTGGCGTGGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQSLEPG*GWRGAS
Trigger: GGACGCACCACGCCAGCCCCAGCCCGGCTCCAGCGA...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCATCTGCAAACTCGGGCTaGCAGCGCTGGGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSSANSG*QRWADG
Trigger: CCCGTCGGCCCAGCGCTGCCAGCCCGAGTTTGCAGA...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGTCTGCAAACTCGGGCTaGCAGCGCTGGGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERSANSG*QRWADG
Trigger: CCCGTCGGCCCAGCGCTGCCAGCCCGAGTTTGCAGA...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGCTCCTCGGTAGGTCTTaGACGGCGGCCGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRLLGRS*TAAEGR
Trigger: TCTACCCTCGGCCGCCGTCCAAGACCTACCGAGGAG...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGCGGCCTCTGGGTGCCTaGGGCCCGGGTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERRPLGA*GPGSGS
Trigger: TGATCCAGAACCCGGGCCCCAGGCACCCAGAGGCCG...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp GGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACTTCCGGCCTCTGGGTGCCTaGGGCCCGGGTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: GWLLLLEKQKSGPCLLNFRPLGA*GPGSGS
Trigger: TGATCCAGAACCCGGGCCCCAGGCACCCAGAGGCCG...GAAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGGCAGCAGCAGCAAACTaGCGCCGGGAGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQAAAAN*RREVLR
Trigger: GCGCAGCACCTCCCGGCGCCAGTTTGCTGCTGCTGC...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCCCTCTACGATGGGCTTaGGGAGAACCATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: GKHYWSRWRESAIKRVAPPLRWA*GEPSSP
Trigger: GGGTGAGGATGGTTCTCCCCAAGCCCATCGTAGAGG...GGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCGTGGGGCCTCTACGATaGGCTTGGGGAGAACCATCC +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTVGPLR*AWGEPS
Trigger: GGATGGTTCTCCCCAAGCCCATCGTAGAGGCCCCAC...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCTTAAGCCGGGGAAAGTaGGGCCCAGCAGGGACAACG +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTLSRGK*GPAGTT
Trigger: CGTTGTCCCTGCTGGGCCCCACTTTCCCCGGCTTAA...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCCACACCCAGGCCCATaGACACCGACACTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRPHPGP*TPTLPY
Trigger: GTAAGGCAGTGTCGGTGTCCATGGGCCTGGGTGTGG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACTTTGCATTCGGCCAATaGGGCACAAGGAGTGGGACG +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNFAFGQ*GTRSGT
Trigger: CGTCCCACTCCTTGTGCCCCATTGGCCGAATGCAAA...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCACCTTCACAGGACCTGTaGGTCAAACCCAATAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPPSQDL*VKPNRG
Trigger: TCCCCTATTGGGTTTGACCCACAGGTCCTGTGAAGG...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CAA 72 bp AGGCTAGAGAGCAAGGCTGCAAAGGAGTCGGGCTGGTaGTTGTCGTGTCCAGCACACACTACACCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLESKAAKESGW*LSCPAHTTPGS
Trigger: TGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGTCGTGGCTGCAGTGCTaGAGCCGCTCCCCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVSWLQC*SRSPVA
Trigger: GGCGACTGGGGAGCGGCTTCAGCACTGCAGCCACGA...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp ACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATAATCCTTGAGCTTGGCTaGATCTTCCACCTACTTCCC +
Preference number: 4 (lower is better)
Translates to: TEPELHCIRLSQCLAPIIILELG*IFHLLP
Trigger: GGGAAGTAGGTGGAAGATTCAGCCAAGCTCAAGGAT...TATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGGGCCGACTGCGGCTGTaGAGGTTGCTGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKGRLRL*RLLFLI
Trigger: GATGAGGAACAGCAACCTTCACAGCCGCAGTCGGCC...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCTCCTGCTGCTGTTGCTaGAGGAGTTGCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GKHYWSRWRESAIKRVAPSCCCC*RSCMVL
Trigger: CAGCACCATGCAACTCCTTCAGCAACAGCAGCAGGA...GGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGGCAAGGCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCTGCAGCTTCCACATGTaGGAGCTCCATAGTGACACC +
Preference number: 4 (lower is better)
Translates to: RQGLGPLDHVYKLSLSQFCSFHM*ELHSDT
Trigger: GGTGTCACTATGGAGCTCTCACATGTGGAAGCTGCA...GAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCTGCAGCTTCCACATGTaGGAGCTCCATAGTGACACC +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCCSFHM*ELHSDT
Trigger: GGTGTCACTATGGAGCTCTCACATGTGGAAGCTGCA...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504326.5
ENST00000514029.5
CDS-3UTR TCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCAGGCCTTGGCCCACTTaGCCACGTGTACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTRPWPT*PRVQAV
Trigger: GACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCT...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR TCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACTCCAGGAGTACTGAATaGCAGCCATCTGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHSRSTE*QPSGRP
Trigger: TGGACGACCAGATGGCTGTCATTCAGTACTCCTGGA...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp AGGCAAGGCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCGCATGCGGTACTCATTaGAAACCAGATCAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: RQGLGPLDHVYKLSLSQFACGTH*KPDQGR
Trigger: TCGCCCCTGATCTGGTTTTCAATGAGTACCGCATGC...GAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACAGCCATCCAAACTCTTaGGAGAGGTGCCTCATTCGG +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHSHPNS*ERCLIR
Trigger: CCGAATGAGGCACCTCTCTCAAGAGTTTGGATGGCT...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGTCCCAGGGCACACCCTaGGTTCATGGGTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRSQGTP*VHGWQS
Trigger: ACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGA...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp TTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGTCAGGGAGAGTCCTTCTaGCTCTCACATGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LVPLEGVSNQESSPQPQRQGESF*LSHVCF
Trigger: GAAACACACATGTGAGAGTCAGAAGGACTCTCCCTG...ACGTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTCTCTGCCTCTGGGCTTaGTCCGGACCGTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICLCLWA*SGPSRS
Trigger: AGAGCGGGACGGTCCGGAGCAAGCCCAGAGGCAGAG...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCACTGGGGCTGGCGTGGTaGGTCCCTTCGGCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSLGLAW*VPSAPV
Trigger: TACAGGAGCCGAAGGGACGCACCACGCCAGCCCCAG...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGTCGAAGCCGCCGCGCTaGAAGAGGCGTTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQSKPPR*KRRWLS
Trigger: CGACAGCCAACGCCTCTTGCAGCGCGGCGGCTTCGA...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTGTCGCTGCAGCTAGCTaGCCACCTGCGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICVAAAS*PPAGSS
Trigger: GGAGCTTCCCGCAGGTGGGCAGCTAGCTGCAGCGAC...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGTCGCTGCAGCTAGCTaGCCACCTGCGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHVAAAS*PPAGSS
Trigger: GGAGCTTCCCGCAGGTGGGCAGCTAGCTGCAGCGAC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGGTCGCTGCAGCTAGCTaGCCACCTGCGGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CGYSKARCKRESRTVVSQVAAAS*PPAGSS
Trigger: GGAGCTTCCCGCAGGTGGGCAGCTAGCTGCAGCGAC...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCTCAGACAGACACACTGGCGCCGGGAGGTaGTGCGCTCGCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YELPNTQIKMATGTSDRHTGAGR*CARGLW
Trigger: CCAGAGGCCGCGAGCGCAGCACCTCCCGGCGCCAGT...GTGTCTGTCTGAGGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCTGCTGCTGCTGCTGCTaGTGCTGCAGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTCCCCC*CCSSSK
Trigger: TTTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCAGCA...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGATGCTGCTGCTGCTGCTaGTGCTGCAGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRCCCCC*CCSSSK
Trigger: TTTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCAGCA...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCCCTGCTGCTGCTGCTaGTGCCTGGGGCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMPCCCC*CLGLVS
Trigger: AGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACCCTGCTGCTGCTGCTaGTGCCTGGGGCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LSPISKVSSWQHTTKSKRPCCCC*CLGLVS
Trigger: AGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGG...TCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGTCACCCTGCTGCTGCTaGTGCTGCCTGGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGSPCCC*CCLGLV
Trigger: GACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGA...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp CACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAATCCTCACCCTGCTGCTaGTGCTGCTGCCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: HLESHQQSFFLAAHHEKQSSPCC*CCCLGL
Trigger: TAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGA...TTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGCCATCCTCACCCTGCTaGTGCTGCTGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQPSSPC*CCCCLG
Trigger: CCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGG...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCATTTTGAATGAGGCACCATCCTCACCCTGCTaGTGCTGCTGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSPDYPLEPSRALILNEAPSSPC*CCCCLG
Trigger: CCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGG...TGCCTCATTCAAAATGAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGCCATCCTCACCCTGCTaGTGCTGCTGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERPSSPC*CCCCLG
Trigger: CCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGG...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGGAACCATCCTCACCCTaGTGCTGCTGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFREPSSP*CCCCCL
Trigger: CAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGGTTC...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACCATGGACACCGACACTaGCTTACACAACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNHGHRH*LTQLLG
Trigger: GCCAAGGAGTTGTGTAAGGCAGTGTCGGTGTCCATG...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCTAGCAGAGAACCTTTaGATTCGGCCAATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: AHHEKQATEPELHCIRLSLAENL*IRPMGH
Trigger: GTGCCCCATTGGCCGAATGCAAAGGTTCTCTGCTAG...ACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCTCCCTGCTGCAGCGCTaGCAGAGCAGCCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FYSPSSQHPCEVGKHYWSSLLQR*QSSLGS
Trigger: AGAGCCTAGGCTGCTCTGGCAGCGCTGCAGCAGGGA...GGACCAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGTGTCCCGGAGCTCCCTaGTGCAGCGCTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERCPGAP*CSAARA
Trigger: TGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGGACA...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGAGAGTCTCCTGAAATaGAGCTTTGGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHESLLK*SFGAGL
Trigger: CAGCCCTGCACCAAAGCTGCATTTCAGGAGACTCTC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAACGCCTCCTCTGCCTCTaGGCTTGCTCCGGACCGTCC +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQRLLCL*ACSGPS
Trigger: GGACGGTCCGGAGCAAGCCCAGAGGCAGAGGAGGCG...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCGCTGCAAGAGGCGTTaGCTGTCGCTGGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSRCKRR*LSLEPG
Trigger: GCCCGGCTCCAGCGACAGCCAACGCCTCTTGCAGCG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTCGGCCTCTGGGTGCCTaGGGCCCGGGTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSRPLGA*GPGSGS
Trigger: TGATCCAGAACCCGGGCCCCAGGCACCCAGAGGCCG...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGGCAGCAGCAGCAAACTaGCGCCGGGAGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVAAAAN*RREVLR
Trigger: GCGCAGCACCTCCCGGCGCCAGTTTGCTGCTGCTGC...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AAATTCTGCCCTGAGAAGGGGGAAACTCCCCTCCTGAAGTCCTTCCTTGGCTTTGGACCAGGTAGCCTGTaGGGCCTCTACGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: KFCPEKGETPLLKSFLGFGPGSL*GLYDGL
Trigger: AAGCCCATCGTAGAGGCCCCACAGGCTACCTGGTCC...AAAGCCAAGGAAGGACTTCAGGAGGGGAGTTTCCCCCTTCTCAGGGCAGAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACAACCTCTCTCGGGGTaGCACTCCAGGGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: GWLASSPGEAEIWSLFTEQPLSG*HSRADC
Trigger: GCAGTCGGCCCTGGAGTGCCACCCCGAGAGAGGTTG...TTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCAACCTCTCTCGGGGTaGCACTCCAGGGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCQPLSG*HSRADC
Trigger: GCAGTCGGCCCTGGAGTGCCACCCCGAGAGAGGTTG...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGATGCTTGCAATTGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTGCTTCACAACCTCTCTCGGGGTaGCACTCCAGGGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: RCLQLPTRNFSPRVIPASQPLSG*HSRADC
Trigger: GCAGTCGGCCCTGGAGTGCCACCCCGAGAGAGGTTG...TGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCAATTGCAAGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCCCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTPAGTT*MGQLSH
Trigger: ATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGG...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp CAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCACCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: QHPCEVGKHYWSRWRESAPAGTT*MGQLSH
Trigger: ATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGG...TGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRPAGTT*MGQLSH
Trigger: ATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGCCACACCCAGGCCCATaGACACCGACACTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRPHPGP*TPTLPY
Trigger: GTAAGGCAGTGTCGGTGTCCATGGGCCTGGGTGTGG...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGACCGAAGCTGTTCCCCTaGACTCAGATGCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRPKLFP*TQMLQR
Trigger: GCGTTGGAGCATCTGAGTCCAGGGGAACAGCTTCGG...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGGGGACGCACAGCGGGTaGAACTCCCAAAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGGTHSG*NSQKWG
Trigger: GCCCCACTTTTGGGAGTTCCACCCGCTGTGCGTCCC...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
56% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp TTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCGGGACGCACAGCGGGTaGAACTCCCAAAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FYSPSSQHPCEVGKHYWSGTHSG*NSQKWG
Trigger: GCCCCACTTTTGGGAGTTCCACCCGCTGTGCGTCCC...GGACCAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGGGGACGCACAGCGGGTaGAACTCCCAAAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMGTHSG*NSQKWG
Trigger: GCCCCACTTTTGGGAGTTCCACCCGCTGTGCGTCCC...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGAGCTTGATGCGAGCGTaGGGATGGGGAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVSLMRA*GWGGGG
Trigger: TCCGCCGCCTCCCCATCCCCACGCTCGCATCAAGCT...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCCACGGTCCATACAACTaGCCTTCTTCGGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SLRRQVSPDYPLEPSRALHGPYN*PSSAVK
Trigger: CTTCACAGCCGAAGAAGGCCAGTTGTATGGACCGTG...GAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAGCAAAACATGGTCCCTaGCAGTCTCCAAACGCATGT +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPAKHGP*QSPNAC
Trigger: ACATGCGTTTGGAGACTGCCAGGGACCATGTTTTGC...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGGGGTTGTCTCCTCAGTaGGGCTGGTGGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKGLSPQ*GWWCWK
Trigger: CTTCCAGCACCACCAGCCCCACTGAGGAGACAACCC...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGGGCATGAGCTGGGGTaGGGAAATAGGGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHGHELG*GNRVSN
Trigger: ATTGGAAACCCTATTTCCCCACCCCAGCTCATGCCC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCATCTTCAACCCTGATCTaGGTAGCCCCTTTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPSSTLI*VAPLAA
Trigger: AGCAGCTAAAGGGGCTACCCAGATCAGGGTTGAAGA...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CAGGGCCTGAGGCTAAGATCTAGGTCACTGGCTGGGATCCAGAAGGCTAGAACCCACTATTGGTCCCGCTaGAGGGAGTCAGCAATCAAG +
Preference number: 4 (lower is better)
Translates to: QGLRLRSRSLAGIQKARTHYWSR*RESAIK
Trigger: CTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTG...GGTTCTAGCCTTCTGGATCCCAGCCAGTGACCTAGATCTTAGCCTCAGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 72 bp CCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATaGGAGCCACACCAACCAGACCTTTCCGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRAHPEFMGGKV*EPHQPDLSERS
Trigger: GCTTCTTTCGGAAAGGTCTGGTTGGTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CAA 72 bp CTAGAGAGCAAGGCTGCAAAGGAGTCGGGCTGGTTGTaGTCGTGTCCAGCACACACTACACCTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: LESKAAKESGWL*SCPAHTTPGSM
Trigger: CATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGCGGGTTCTCCAGCTTaGTGCGAGCGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKAGSPA*CERGDG
Trigger: CCCATCCCCACGCTCGCATCAAGCTGGAGAACCCGC...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR TCA 90 bp AATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAGCGGGTTCTCCAGCTTaGTGCGAGCGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: NGNHYYFYSPSSQHPCEVAGSPA*CERGDG
Trigger: CCCATCCCCACGCTCGCATCAAGCTGGAGAACCCGC...TACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAAGCGGGTTCTCCAGCTTaGTGCGAGCGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQAGSPA*CERGDG
Trigger: CCCATCCCCACGCTCGCATCAAGCTGGAGAACCCGC...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CCTGAAGTCCTTCCTTGGCTTTTCTCCAGAATGTTGCTGAGTCAGGGGAAAGAGACACATCAGGTGCGGTaGAGTCGCTTTCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PEVLPWLFSRMLLSQGKETHQVR*SRFPGP
Trigger: CGGGCCAGGAAAGCGACTTCACCGCACCTGATGTGT...CTCTTTCCCCTGACTCAGCAACATTCTGGAGAAAAGCCAAGGAAGGACTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCCTTCAGCGGCTCTTTTaGAGAAGACCTTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLRRQVSPDYPLEPSRALLQRLF*RRPCSF
Trigger: GAAGCTGCAAGGTCTTCTTCAAAAGAGCCGCTGAAG...GAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504326.5
ENST00000514029.5
CDS-3UTR TCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCCCATCCAGGAGTACTaGATGACAGCCATCTGGTCG +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRPIQEY*MTAIWS
Trigger: CGACCAGATGGCTGTCATTCAGTACTCCTGGATGGG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGGTGGATATGCTGGGTaGCAAGAAGAGCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHGGYAG*QEEHLQ
Trigger: CTGCAAATGCTCTTCTTGTCACCCAGCATATCCACC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp CAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGCTACCTTCAGCTCAGTaGCAGGGCCTGAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: QGDTLSPISKVSSWQHTTLPSAQ*QGLRLR
Trigger: TCTTAGCCTCAGGCCCTGTCACTGAGCTGAAGGTAG...CGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGACTACCTTCAGCTCAGTaGCAGGGCCTGAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRLPSAQ*QGLRLR
Trigger: TCTTAGCCTCAGGCCCTGTCACTGAGCTGAAGGTAG...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp CAGGGCCTGAGGCTAAGATCTAGGTCACTGGCTGGGATCCAGAAGGCTAGAACCCAGGGAGAGTCCTTCTaGCTCTCACATGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: QGLRLRSRSLAGIQKARTQGESF*LSHVCF
Trigger: GAAACACACATGTGAGAGTCAGAAGGACTCTCCCTG...GGTTCTAGCCTTCTGGATCCCAGCCAGTGACCTAGATCTTAGCCTCAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACCCTAAGAGCCTTCTTTaGAATGTGCAGCTAGCTCGC +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHPKSLL*NVQLAR
Trigger: GCGAGCTAGCTGCACATTGCAAAGAAGGCTCTTAGG...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGCAGGCGGGTCGTGGCTaGAGTGCTGAAGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQQAGRG*SAEAAP
Trigger: GGGAGCGGCTTCAGCACTGCAGCCACGACCCGCCTG...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGACGGTGGACAAGATCTaGCCTGCTAGGCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRTVDKI*PARLTV
Trigger: GACTGTGAGCCTAGCAGGGCAGATCTTGTCCACCGT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGTGCTGCTGCTGCTGCTaGCTGGGGCTAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGCCCCC*LGLVSC
Trigger: GCAAGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCA...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGTGCTGCTGCTGCTGCTaGCTGGGGCTAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMCCCCC*LGLVSC
Trigger: GCAAGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCA...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GTTTCCCTAAATAGTCATAAAATGGGCTGGCATGAGGTCCACTGCATGCCAGCTCCCTGCTGCTGCTGCTaGTGCCTGGGGCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VSLNSHKMGWHEVHCMPAPCCCC*CLGLVS
Trigger: AGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGG...AGCTGGCATGCAGTGGACCTCATGCCAGCCCATTTTATGACTATTTAGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR GCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATCCCTGCTGCTGCTGCTaGTGCCTGGGGCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHPCCCC*CLGLVS
Trigger: AGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGG...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCATCCTCACCCTGCTGCTaGTGCTGCTGCCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSSSPCC*CCCLGL
Trigger: TAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGA...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATTCCTCACCCTGCTGCTaGTGCTGCTGCCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHSSPCC*CCCLGL
Trigger: TAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGA...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAACCATCCTCACCCTGCTaGTGCTGCTGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKPSSPC*CCCCLG
Trigger: CCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGG...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp TGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTGCTTCATAACATTTCCGAACCATCCTCACCCTGCTaGTGCTGCTGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CQPGIFLPESSLLHNISEPSSPC*CCCCLG
Trigger: CCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGG...TTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TGTGTTGAGGAGCAAAAACCTAAGCTCCTAAGCCTCAGACGCCAGGTTTCTCCAGAACCATCCTCACCCTaGTGCTGCTGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CVEEQKPKLLSLRRQVSPEPSSP*CCCCCL
Trigger: CAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGGTTC...TGGAGAAACCTGGCGTCTGAGGCTTAGGAGCTTAGGTTTTTGCTCCTCAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGTGCGGCTGTGAAGGTTaGTGTTCCTCATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRCGCEG*CSSSRT
Trigger: GGTCCTGGATGAGGAACAGCAACCTTCACAGCCGCA...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCTGCGGCTGTGAAGGTTaGTGTTCCTCATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTCGCEG*CSSSRT
Trigger: GGTCCTGGATGAGGAACAGCAACCTTCACAGCCGCA...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCACTCCAGGGCCGACTaGGGCTGTGAAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGHSRAD*GCEGCC
Trigger: ACAGCAACCTTCACAGCCGCAGTCGGCCCTGGAGTG...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGTCCCTGCTGCAGCGCTaGCAGAGCAGCCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERSLLQR*QSSLGS
Trigger: AGAGCCTAGGCTGCTCTGGCAGCGCTGCAGCAGGGA...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTTCCCTGCTGCAGCGCTaGCAGAGCAGCCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLASLLQR*QSSLGS
Trigger: AGAGCCTAGGCTGCTCTGGCAGCGCTGCAGCAGGGA...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACTTCTCCCTGCTGCAGCGCTaGCAGAGCAGCCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GWLLLLEKQKSGPCLLNFSLLQR*QSSLGS
Trigger: AGAGCCTAGGCTGCTCTGGCAGCGCTGCAGCAGGGA...GAAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp ATGAATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGTGTCCCGGAGCTCCCTaGTGCAGCGCTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: MNGNHYYFYSPSSQHPCECPGAP*CSAARA
Trigger: TGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGGACA...CTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTTGTCCCGGAGCTCCCTaGTGCAGCGCTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSCPGAP*CSAARA
Trigger: TGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGGACA...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATCAGCCGCCCAGGCGCTaGCGTAGTCCAGCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDQPPRR*RSPAGS
Trigger: AGAACCCGCTGGACTACGGCAGCGCCTGGGCGGCTG...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCGCTGTGAAGAGAGTGTaGCAGGATGAGGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFAVKRV*QDEEAA
Trigger: CGCCGCTTCCTCATCCTGGCACACTCTCTTCACAGC...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCTCCCAGAGTCATCCCTaGTTCATAACATTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: KQATEPELHCIRLSQCLASQSHP*FITFPK
Trigger: CTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGA...GGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCTGGCAGCTGTCTGCTaGCCAGCACAGACGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCLAAVC*PAQTEP
Trigger: AGGCTCCGTCTGTGCTGGGCAGCAGACAGCTGCCAG...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCATGGAGCTGGTCCTGCTaGCCAGTGGAGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSWSWSC*PVEAKC
Trigger: GCACTTGGCCTCCACTGGGCAGCAGGACCAGCTCCA...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGCTTGGAGCTGGTCCTaGTGCCCAGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAAWSWS*CPVEAK
Trigger: CTTGGCCTCCACTGGGCAGCAGGACCAGCTCCAAGC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCGCTTGGAGCTGGTCCTaGTGCCCAGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCAWSWS*CPVEAK
Trigger: CTTGGCCTCCACTGGGCAGCAGGACCAGCTCCAAGC...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACGGCGTTGGCTGTCGCTaGAGCCGGGCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNGVGCR*SRAGAG
Trigger: GCCAGCCCCAGCCCGGCTCCAGCGACAGCCAACGCC...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGACGCTGCAAGAGGCGTTaGCTGTCGCTGGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRRCKRR*LSLEPG
Trigger: GCCCGGCTCCAGCGACAGCCAACGCCTCTTGCAGCG...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTGAAGAAGACACACGGTaGACAAGATCTGCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: AHHEKQATEPELHCIRLSEEDTR*TRSALL
Trigger: TAGCAGGGCAGATCTTGTCCACCGTGTGTCTTCTTC...ACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGATGCTTGCAATTGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTGCTTCACTCCTCGGTAGGTCTTaGACGGCGGCCGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RCLQLPTRNFSPRVIPASLLGRS*TAAEGR
Trigger: TCTACCCTCGGCCGCCGTCCAAGACCTACCGAGGAG...TGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCAATTGCAAGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCTCCTCGGTAGGTCTTaGACGGCGGCCGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PCLLNFCGSATTFSSVTGLLGRS*TAAEGR
Trigger: TCTACCCTCGGCCGCCGTCCAAGACCTACCGAGGAG...CCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCACTTCGCGCACGCTCTaGAACAGATTCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCTSRTL*NRFWKA
Trigger: AGCTTTCCAGAATCTGTTCCAGAGCGTGCGCGAAGT...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCTGGGGCCCGGGTTCTaGATCACTTCGCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSLGPGF*ITSRTL
Trigger: GAGCGTGCGCGAAGTGATCCAGAACCCGGGCCCCAG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCCGGCCTCTGGGTGCCTaGGGCCCGGGTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: EIWSLFTELLWISYYLQLRPLGA*GPGSGS
Trigger: TGATCCAGAACCCGGGCCCCAGGCACCCAGAGGCCG...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGCAACCTCTCTCGGGGTaGCACTCCAGGGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVQPLSG*HSRADC
Trigger: GCAGTCGGCCCTGGAGTGCCACCCCGAGAGAGGTTG...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATGGCGGCTCCAGGCTCTaGGACGCAACCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDGGSRL*DATSLG
Trigger: CCCGAGAGAGGTTGCGTCCCAGAGCCTGGAGCCGCC...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCGGCGGCTCCAGGCTCTaGGACGCAACCTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: EIWSLFTELLWISYYLQLGGSRL*DATSLG
Trigger: CCCGAGAGAGGTTGCGTCCCAGAGCCTGGAGCCGCC...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAATTAAGCCGGGGAAAGTaGGGCCCAGCAGGGACAACG +
Preference number: 4 (lower is better)
Translates to: HLESHQQSFFLAAHHEKQLSRGK*GPAGTT
Trigger: CGTTGTCCCTGCTGGGCCCCACTTTCCCCGGCTTAA...TTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCGGAGTTGCATGGTGCTaGCCTCGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTGVAWC*PRSGCL
Trigger: AAGACATCCTGAGCGAGGCCAGCACCATGCAACTCC...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp CAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAGGAGTTGCATGGTGCTaGCCTCGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: QHPCEVGKHYWSRWRESAGVAWC*PRSGCL
Trigger: AAGACATCCTGAGCGAGGCCAGCACCATGCAACTCC...TGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAATGGGGCACAAGGAGTaGGACGCACAGCGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HLESHQQSFFLAAHHEKQMGHKE*DAQRVE
Trigger: TTCCACCCGCTGTGCGTCCCACTCCTTGTGCCCCAT...TTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCTCCGGCCAGAGCCAGTaGAAAGTTGTAGTAGTCGCG +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTSGQSQ*KVVVVA
Trigger: CGCGACTACTACAACTTTCCACTGGCTCTGGCCGGA...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp TGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTGCTTCATAACATTTCCGAAAGCTTGATGCGAGCGTaGGGATGGGGAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: CQPGIFLPESSLLHNISESLMRA*GWGGGG
Trigger: TCCGCCGCCTCCCCATCCCCACGCTCGCATCAAGCT...TTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGGGGTTGTCTCCTCAGTaGGGCTGGTGGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMGLSPQ*GWWCWK
Trigger: CTTCCAGCACCACCAGCCCCACTGAGGAGACAACCC...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCACTACACCTGGCTCAATaGCTTCCAGGACATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPLHLAQ*LPGHSE
Trigger: TTCTGAATGTCCTGGAAGCCATTGAGCCAGGTGTAG...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTGCTGGCTTCTTCTCCTaGAGAAGCAGAAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: AHHEKQATEPELHCIRLSAGFFS*RSRNLV
Trigger: GACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGC...ACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 72 bp TTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCATaGAGGCTAGAGAGCAAGGCTGCAAAGGAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: LTTCTSCLSPSS*RLESKAAKESG
Trigger: GCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAATGAACTGGGAGAGAGACAGCTTGTACACGTGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGAACGCAAAAAGCGCTCTaGCAGCCTCAAAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRTQKAL*QPQSLV
Trigger: CACGAGACTTTGAGGCTGTCAGAGCGCTTTTTGCGT...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGAATCCTTGAGCTTGGCTaGATCTTCCACCTACTTCCC +
Preference number: 4 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGILELG*IFHLLP
Trigger: GGGAAGTAGGTGGAAGATTCAGCCAAGCTCAAGGAT...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGGCCGACTGCGGCTGTaGAGGTTGCTGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHGRLRL*RLLFLI
Trigger: GATGAGGAACAGCAACCTTCACAGCCGCAGTCGGCC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCTCCTGCTGCTGTTGCTaGAGGAGTTGCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFSCCCC*RSCMVL
Trigger: CAGCACCATGCAACTCCTTCAGCAACAGCAGCAGGA...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TGTGTTGAGGAGCAAAAACCTAAGCTCCTAAGCCTCAGACGCCAGGTTTCTCCAGGCCTTCTTCGGCTGTaGAGAGAGTGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CVEEQKPKLLSLRRQVSPGLLRL*RECARM
Trigger: CATCCTGGCACACTCTCTTCACAGCCGAAGAAGGCC...TGGAGAAACCTGGCGTCTGAGGCTTAGGAGCTTAGGTTTTTGCTCCTCAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp ATCAAGAGAGTAGCCCCCAACCCCAACGTCAAAGTCTGTGTTGAGGAGCAAAAAACACATCAGGTGCGGTaGAGTCGCTTTCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: IKRVAPNPNVKVCVEEQKTHQVR*SRFPGP
Trigger: CGGGCCAGGAAAGCGACTTCACCGCACCTGATGTGT...TTTTTGCTCCTCAACACAGACTTTGACGTTGGGGTTGGGGGCTACTCTCTTGAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCTGCAGCTTCCACATGTaGGAGCTCCATAGTGACACC +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTCSFHM*ELHSDT
Trigger: GGTGTCACTATGGAGCTCTCACATGTGGAAGCTGCA...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR TCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGCCTTGGCCCACTTaGCCACGTGTACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMRPWPT*PRVQAV
Trigger: GACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCT...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR TCA 90 bp GCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCATTGAGGGCACTTGCACAGAGATaGTCTCTGCCATCATTTCCG +
Preference number: 4 (lower is better)
Translates to: ALAHLTTCTSCLSPSSLRALAQR*SLPSFP
Trigger: CGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGC...CCTCAATGAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGAGGCCCACAAAACACTaGAGGGAGGACATAAGGTGC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRRPTKH*REDIRC
Trigger: GCACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTCCAGCTAAGTGGGTCTaGGTGGCCAGTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAPAKWV*VASPSQ
Trigger: CTGTGAGGGACTGGCCACTCAGACCCACTTAGCTGG...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGCAGGTTCCCATACTGTaGGGCAGCAGCCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVQVPIL*GSSQRG
Trigger: CCCTCTCTGGCTGCTGCCTCACAGTATGGGAACCTG...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATCAGGTTCCCATACTGTaGGGCAGCAGCCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHQVPIL*GSSQRG
Trigger: CCCTCTCTGGCTGCTGCCTCACAGTATGGGAACCTG...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACTCCAAGGTGACACCTTaGGTCCCATCAGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNSKVTP*VPSAKF
Trigger: AAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGA...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGCTCTGCCTCTGGGCTTaGTCCGGACCGTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQLCLWA*SGPSRS
Trigger: AGAGCGGGACGGTCCGGAGCAAGCCCAGAGGCAGAG...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTCTCTGTCGCCTCCTCTaGCTCTGGGCTTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSLCRLL*LWACSG
Trigger: TCCGGAGCAAGCCCAGAGGCAGAGGAGGCGACAGAG...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACGGTGGACAAGATCTaGCCTGCTAGGCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFTVDKI*PARLTV
Trigger: GACTGTGAGCCTAGCAGGGCAGATCTTGTCCACCGT...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCCCAGAGAAGGAAACTTaGGGGAGCAACCACGCAAAA +
Preference number: 4 (lower is better)
Translates to: GKHYWSRWRESAIKRVAPPEKET*GSNHAK
Trigger: TTTTGCGTGGTTGCTCCCGCAAGTTTCCTTCTCTGG...GGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCATGCTGCTGCTGCTGCTaGAGCAGCAGCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSCCCCC*SSSKLA
Trigger: CGCCAGTTTGCTGCTGCTGCAGCAGCAGCAGCAGCA...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp TTGCTTCTTGTCCAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGTGCTGCTGCTGCTGCTaGCTGGGGCTAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLLVQGDTLSPISKVSSWCCCCC*LGLVSC
Trigger: GCAAGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCA...CCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAACCCTGCTGCTGCTGCTaGTGCCTGGGGCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKPCCCC*CLGLVS
Trigger: AGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGG...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp GGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAAGAACCATCCTCACCCTaGTGCTGCTGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GWLASSPGEAEIWSLFTEEPSSP*CCCCCL
Trigger: CAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGGTTC...TTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTTAAAGGGTGCTGGCAGCTGCTaGGGCAGCCCCTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VNKHNLTLGHMRIITDLKGAGSC*GSPLLA
Trigger: CGCCAGCAAGGGGCTGCCGCAGCAGCTGCCAGCACC...CTTTAAATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp ACTAGAAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGAGGTGCTGGCAGCTGCTaGGGCAGCCCCTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TRKKLVSIWKLWSRERTRGAGSC*GSPLLA
Trigger: CGCCAGCAAGGGGCTGCCGCAGCAGCTGCCAGCACC...TCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGGTCAGCGGAGCAGCTaGTTAAGCCGGGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAGQRSS*LSRGKW
Trigger: CCACTTTCCCCGGCTTAAGCAGCTGCTCCGCTGACC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGGTCAGCGGAGCAGCTaGTTAAGCCGGGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHGQRSS*LSRGKW
Trigger: CCACTTTCCCCGGCTTAAGCAGCTGCTCCGCTGACC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTGGTCAGCGGAGCAGCTaGTTAAGCCGGGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ECGYSKARCKRESRTVVSGQRSS*LSRGKW
Trigger: CCACTTTCCCCGGCTTAAGCAGCTGCTCCGCTGACC...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTTTCCCTAAATAGTCATAAAATGGGCTGGCATGAGGTCCACTGCATGCCAGCTGGTCAGCGGAGCAGCTaGTTAAGCCGGGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: VSLNSHKMGWHEVHCMPAGQRSS*LSRGKW
Trigger: CCACTTTCCCCGGCTTAAGCAGCTGCTCCGCTGACC...AGCTGGCATGCAGTGGACCTCATGCCAGCCCATTTTATGACTATTTAGGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR GCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGTCCCCTGGACTCAGATaGTCCAACGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQSPGLR*SNASTP
Trigger: GGGTGTGGAGGCGTTGGAGCATCTGAGTCCAGGGGA...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATTCCCCTGGACTCAGATaGTCCAACGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHSPGLR*SNASTP
Trigger: GGGTGTGGAGGCGTTGGAGCATCTGAGTCCAGGGGA...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp CAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCACTAGCAGAGAACCTTTaGATTCGGCCAATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QHPCEVGKHYWSRWRESALAENL*IRPMGH
Trigger: GTGCCCCATTGGCCGAATGCAAAGGTTCTCTGCTAG...TGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCCAGCAGTATCTTCAGTaGTCTTGCCTGCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTQQYLQ*SCLRCR
Trigger: ACGACAGCGCAGGCAAGAGCACTGAAGATACTGCTG...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGACAGCAGTATCTTCAGTaGTCTTGCCTGCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRQQYLQ*SCLRCR
Trigger: ACGACAGCGCAGGCAAGAGCACTGAAGATACTGCTG...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGATGTCCCGGAGCTCCCTaGTGCAGCGCTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRCPGAP*CSAARA
Trigger: TGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGGACA...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGACTCTGGTACGCAGCTaGCTCGTCCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQTLVRS*LVQCSG
Trigger: TCCGGAGCACTGGACGAGGCAGCTGCGTACCAGAGT...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GTTTCCCTAAATAGTCATAAAATGGGCTGGCATGAGGTCCACTGCATGCCAGCTACTCTGGTACGCAGCTaGCTCGTCCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: VSLNSHKMGWHEVHCMPATLVRS*LVQCSG
Trigger: TCCGGAGCACTGGACGAGGCAGCTGCGTACCAGAGT...AGCTGGCATGCAGTGGACCTCATGCCAGCCCATTTTATGACTATTTAGGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR GCA 90 bp TACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCTCAGACAGACACAGAACCGGGTCCCGCTaGACCCGCGCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YELPNTQIKMATGTSDRHRTGSR*TRAMQA
Trigger: AGCCTGCATGGCGCGGGTGCAGCGGGACCCGGTTCT...GTGTCTGTCTGAGGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGGCTGTGAAGAGAGTGTaGCAGGATGAGGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGAVKRV*QDEEAA
Trigger: CGCCGCTTCCTCATCCTGGCACACTCTCTTCACAGC...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCTGGGATAGGGCACTCTaGTCACCATGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISWDRAL*SPCRQG
Trigger: ACCCTGGCGGCATGGTGAGCAGAGTGCCCTATCCCA...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp TTGCTTCTTGTCCAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGTGGGATAGGGCACTCTaGTCACCATGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LLLVQGDTLSPISKVSSWWDRAL*SPCRQG
Trigger: ACCCTGGCGGCATGGTGAGCAGAGTGCCCTATCCCA...CCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp ATCAAGAGAGTAGCCCCCAACCCCAACGTCAAAGTCTGTGTTGAGGAGCAAAAATGGGATAGGGCACTCTaGTCACCATGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: IKRVAPNPNVKVCVEEQKWDRAL*SPCRQG
Trigger: ACCCTGGCGGCATGGTGAGCAGAGTGCCCTATCCCA...TTTTTGCTCCTCAACACAGACTTTGACGTTGGGGTTGGGGGCTACTCTCTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGGCTAGAGAGCAAGGCTaGAAAGGAGTCGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRAREQG*KGVGLV
Trigger: AACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGC...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR GCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACGAGAACTTCTCCACTTaGTGGGAGGGTATCATCTCT +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHENFST*WEGIIS
Trigger: AGAGATGATACCCTCCCAGCAAGTGGAGAAGTTCTC...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAATGGAGCTGGTCCTGCTaGCCAGTGGAGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQWSWSC*PVEAKC
Trigger: GCACTTGGCCTCCACTGGGCAGCAGGACCAGCTCCA...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CGGAAGCCAGGCAAGGCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCTTCAGGCAGGCATTTaGATAGGCAAGAAGATGGAA +
Preference number: 4 (lower is better)
Translates to: RKPGKALAHLTTCTSCLSLQAGI*IGKKME
Trigger: TTCCATCTTCTTGCCTATGCAAATGCCTGCCTGAAG...AGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGCTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR GCA 90 bp AAGGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTACACCTGGCTCAATGATGTCAGGAGCACTCTaGATTCGTTTCCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: KESGWLLSCPAHTTPGSMMSGAL*IRFPGS
Trigger: GGAACCAGGGAAACGAATGCAGAGTGCTCCTGACAT...CATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR GCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGTCATTTTGAGATaGTTGCAATTGCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCLVILR*LQLPTR
Trigger: CCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAG...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCAAAGCACTTTGCCAATaGCAAGCCACATTACAGGAA +
Preference number: 4 (lower is better)
Translates to: KQATEPELHCIRLSQCLAKALCQ*QATLQE
Trigger: TTCCTGTAATGTGGCTTGGCATTGGCAAAGTGCTTT...GGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGAGCTCTCCCAGCAAGCTaGCTCCCCGGGATCTCGGAG +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRALPAS*LPGISE
Trigger: CTCCGAGATCCCGGGGAGCCAGCTTGCTGGGAGAGC...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCGTGGGGCCTCTACGATaGGCTTGGGGAGAACCATCC +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCVGPLR*AWGEPS
Trigger: GGATGGTTCTCCCCAAGCCCATCGTAGAGGCCCCAC...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTGTGGGGCCTCTACGATaGGCTTGGGGAGAACCATCC +
Preference number: 4 (lower is better)
Translates to: ECGYSKARCKRESRTVVSVGPLR*AWGEPS
Trigger: GGATGGTTCTCCCCAAGCCCATCGTAGAGGCCCCAC...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAAGTGGGGCCTCTACGATaGGCTTGGGGAGAACCATCC +
Preference number: 4 (lower is better)
Translates to: GWLASSPGEAEIWSLFTEVGPLR*AWGEPS
Trigger: GGATGGTTCTCCCCAAGCCCATCGTAGAGGCCCCAC...TTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGGACCAGGTAGCCTGTaGGGCCTCTACGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHGPGSL*GLYDGL
Trigger: AAGCCCATCGTAGAGGCCCCACAGGCTACCTGGTCC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp GTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCATTTTGAATGAGGCAGGACCAGGTAGCCTGTaGGGCCTCTACGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: VSPDYPLEPSRALILNEAGPGSL*GLYDGL
Trigger: AAGCCCATCGTAGAGGCCCCACAGGCTACCTGGTCC...TGCCTCATTCAAAATGAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGGGACCAGGTAGCCTGTaGGGCCTCTACGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQGPGSL*GLYDGL
Trigger: AAGCCCATCGTAGAGGCCCCACAGGCTACCTGGTCC...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTACCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: EVGKHYWSRWRESAIKRVPAGTT*MGQLSH
Trigger: ATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGG...TACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGTTAAGCCGGGGAAAGTaGGGCCCAGCAGGGACAACG +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERLSRGK*GPAGTT
Trigger: CGTTGTCCCTGCTGGGCCCCACTTTCCCCGGCTTAA...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp TTGCTTCTTGTCCAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCCACACCCAGGCCCATaGACACCGACACTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: LLLVQGDTLSPISKVSSWPHPGP*TPTLPY
Trigger: GTAAGGCAGTGTCGGTGTCCATGGGCCTGGGTGTGG...CCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACTTCCCACACCCAGGCCCATaGACACCGACACTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: GWLLLLEKQKSGPCLLNFPHPGP*TPTLPY
Trigger: GTAAGGCAGTGTCGGTGTCCATGGGCCTGGGTGTGG...GAAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGCCACACCCAGGCCCATaGACACCGACACTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVPHPGP*TPTLPY
Trigger: GTAAGGCAGTGTCGGTGTCCATGGGCCTGGGTGTGG...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTCCACACCCAGGCCCATaGACACCGACACTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPPHPGP*TPTLPY
Trigger: GTAAGGCAGTGTCGGTGTCCATGGGCCTGGGTGTGG...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGATGGGGCACAAGGAGTaGGACGCACAGCGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERMGHKE*DAQRVE
Trigger: TTCCACCCGCTGTGCGTCCCACTCCTTGTGCCCCAT...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCTCCGGCCAGAGCCAGTaGAAAGTTGTAGTAGTCGCG +
Preference number: 4 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFSGQSQ*KVVVVA
Trigger: CGCGACTACTACAACTTTCCACTGGCTCTGGCCGGA...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGTCTCCTCAGTGGGGCTaGTGGTGCTGGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERSPQWG*WCWKPL
Trigger: GAGAGGCTTCCAGCACCACCAGCCCCACTGAGGAGA...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGTCTCCTCAGTGGGGCTaGTGGTGCTGGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVSPQWG*WCWKPL
Trigger: GAGAGGCTTCCAGCACCACCAGCCCCACTGAGGAGA...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGTTGTCTCCTCAGTaGGGCTGGTGGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERGLSPQ*GWWCWK
Trigger: CTTCCAGCACCACCAGCCCCACTGAGGAGACAACCC...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCGGGCATGAGCTGGGGTaGGGAAATAGGGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTGHELG*GNRVSN
Trigger: ATTGGAAACCCTATTTCCCCACCCCAGCTCATGCCC...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCACCTTCTCGTCACTATTaGCCTCTTTGGGGATTTCTA +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPPSRHY*PLWGFL
Trigger: TAGAAATCCCCAAAGAGGCCAATAGTGACGAGAAGG...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGGCAAGGCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCGCAAAACATGGTCCCTaGCAGTCTCCAAACTGTGAA +
Preference number: 4 (lower is better)
Translates to: RQGLGPLDHVYKLSLSQFAKHGP*QSPNCE
Trigger: TTCACAGTTTGGAGACTGCCAGGGACCATGTTTTGC...GAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR CCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCAGCAAAGTTTCTTCCTaGCAGCACACCACGAAAAGC +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCSKVSS*QHTTKS
Trigger: GCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCT...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 72 bp ATTAGGGGGCCACTGGTCAATCACTTGGGTAGGCTTTaGGCCCCAAGTTTGGGCCTTCCCTGTGGTAAATCT +
Preference number: 4 (lower is better)
Translates to: IRGPLVNHLGRL*APSLGLPCGKS
Trigger: AGATTTACCACAGGGAAGGCCCAAACTTGGGGCCAAAAGCCTACCCAAGTGATTGACCAGTGGCCCCCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CAA 72 bp TGCCTCATTCGGACACACTGGCTGTACATCCGGGACTaGTGCATGCGGTACTCATTGAAAACCAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: CLIRTHWLYIRD*CMRYSLKTRSG
Trigger: CCCTGATCTGGTTTTCAATGAGTACCGCATGCACAAGTCCCGGATGTACAGCCAGTGTGTCCGAATGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCTGAGAGTAGCCGACTaGGGCAGCTGCGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSLRVAD*GSCGRE
Trigger: TTCTCTCCCGCAGCTGCCTCAGTCGGCTACTCTCAG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAAGGCCGACTGCGGCTGTaGAGGTTGCTGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQGRLRL*RLLFLI
Trigger: GATGAGGAACAGCAACCTTCACAGCCGCAGTCGGCC...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGTCCTGCTGCTGTTGCTaGAGGAGTTGCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGSCCCC*RSCMVL
Trigger: CAGCACCATGCAACTCCTTCAGCAACAGCAGCAGGA...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCGGCCTTCTTCGGCTGTaGAGAGAGTGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISGLLRL*RECARM
Trigger: CATCCTGGCACACTCTCTTCACAGCCGAAGAAGGCC...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR TCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTGGCCTTCTTCGGCTGTaGAGAGAGTGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ECGYSKARCKRESRTVVSGLLRL*RECARM
Trigger: CATCCTGGCACACTCTCTTCACAGCCGAAGAAGGCC...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGGCCTTCTTCGGCTGTaGAGAGAGTGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAGLLRL*RECARM
Trigger: CATCCTGGCACACTCTCTTCACAGCCGAAGAAGGCC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTGGCCTTCTTCGGCTGTaGAGAGAGTGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPGLLRL*RECARM
Trigger: CATCCTGGCACACTCTCTTCACAGCCGAAGAAGGCC...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAACACATCAGGTGCGGTaGAGTCGCTTTCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKTHQVR*SRFPGP
Trigger: CGGGCCAGGAAAGCGACTTCACCGCACCTGATGTGT...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR TCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGGGCCCATTTCGCTTTTaGCACAAGTGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRGPFRF*HKWDWD
Trigger: ATCCCAGTCCCACTTGTGTCAAAAGCGAAATGGGCC...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR TCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTAGGCCTTGGCCCACTTaGCCACGTGTACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICRPWPT*PRVQAV
Trigger: GACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCT...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCCATGGCAAACACCATaGGCCCCATCCAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGPWQTP*APSRST
Trigger: AGTACTCCTGGATGGGGCTCATGGTGTTTGCCATGG...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR TCA 90 bp CTGGCTGTACATCCGGGACTTGTGCATGCGGTACTCATTGAAAACCAGATCAGGAGCCATCCAAACTCTTaGGAGAGGTGCCTCATTCGG +
Preference number: 4 (lower is better)
Translates to: LAVHPGLVHAVLIENQIRSHPNS*ERCLIR
Trigger: CCGAATGAGGCACCTCTCTCAAGAGTTTGGATGGCT...CCTGATCTGGTTTTCAATGAGTACCGCATGCACAAGTCCCGGATGTACAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGGCTCCAGCTCCTCCCTaGCTCACACATGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMAPAPP*LTHEKA
Trigger: TGCTTTCTCATGTGTGAGTCAGGGAGGAGCTGGAGC...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTCACAACATCCCTGTaGGGTAGGAAAACACTATTG +
Preference number: 4 (lower is better)
Translates to: HEKQATEPELHCIRLSQCLTTSL*GRKTLL
Trigger: CAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAG...GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGACCAGGCACTTTCCTTaGTTCCTCCGAGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRTRHFP*FLRVFS
Trigger: GCTAAAGACTCGGAGGAAGCAAGGAAAGTGCCTGGT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCCTAAGAGCCTTCTTTaGAATGTGCAGCTAGCTCGC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRPKSLL*NVQLAR
Trigger: GCGAGCTAGCTGCACATTGCAAAGAAGGCTCTTAGG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGAACGGTGGACAAGATCTaGCCTGCTAGGCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: LSPISKVSSWQHTTKSKRTVDKI*PARLTV
Trigger: GACTGTGAGCCTAGCAGGGCAGATCTTGTCCACCGT...TCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAATGCTGCTGCTGCTGCTaGAGCAGCAGCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKCCCCC*SSSKLA
Trigger: CGCCAGTTTGCTGCTGCTGCAGCAGCAGCAGCAGCA...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp AATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTATGCTGCTGCTGCTGCTaGAGCAGCAGCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: NGNHYYFYSPSSQHPCEVCCCCC*SSSKLA
Trigger: CGCCAGTTTGCTGCTGCTGCAGCAGCAGCAGCAGCA...TACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTGCTTCATAACATTTCCGAATGCTGCTGCTGCTGCTaGAGCAGCAGCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: CQPGIFLPESSLLHNISECCCCC*SSSKLA
Trigger: CGCCAGTTTGCTGCTGCTGCAGCAGCAGCAGCAGCA...TTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TTTCTCCCAGAGTCATCCCTGCTTCATAACATTTCCGAAGACGACAAGATGGACTGCTGCTGCTGCTGCTaGAGCAGCAGCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: FLPESSLLHNISEDDKMDCCCCC*SSSKLA
Trigger: CGCCAGTTTGCTGCTGCTGCAGCAGCAGCAGCAGCA...GTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TGTTTCCCTGGCTTCACAGACTCCACTTCTCCACTAGAAAGAAACTGGTGTCAATGCTGCTGCTGCTGCTaGCTGGGGCTAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: CFPGFTDSTSPLERNWCQCCCCC*LGLVSC
Trigger: GCAAGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCA...TTGACACCAGTTTCTTTCTAGTGGAGAAGTGGAGTCTGTGAAGCCAGGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTCACCCTGCTGCTGCTaGTGCTGCCTGGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDSPCCC*CCLGLV
Trigger: GACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGA...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGGAACCATCCTCACCCTaGTGCTGCTGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVEPSSP*CCCCCL
Trigger: CAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGGTTC...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTCACTCCAGGGCCGACTaGGGCTGTGAAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSHSRAD*GCEGCC
Trigger: ACAGCAACCTTCACAGCCGCAGTCGGCCCTGGAGTG...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CTAAGGGGGAAATACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCATCCTCGTCCGGAGGTaGTGGCAGCTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LRGKYELPNTQIKMATGTILVRR*WQLLRQ
Trigger: CTGCCGCAGCAGCTGCCAGCACCTCCGGACGAGGAT...GGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTATTTCCCCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCCAGAAATGGTCGAAGTaGCCCCTAAGTAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLRRQVSPDYPLEPSRALQKWSK*PLSNCP
Trigger: AGGACAATTACTTAGGGGGCACTTCGACCATTTCTG...GAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGCATGGACACCGACACTaGCTTACACAACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRHGHRH*LTQLLG
Trigger: GCCAAGGAGTTGTGTAAGGCAGTGTCGGTGTCCATG...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGCATGGACACCGACACTaGCTTACACAACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKHGHRH*LTQLLG
Trigger: GCCAAGGAGTTGTGTAAGGCAGTGTCGGTGTCCATG...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGCTAGCAGAGAACCTTTaGATTCGGCCAATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRLAENL*IRPMGH
Trigger: GTGCCCCATTGGCCGAATGCAAAGGTTCTCTGCTAG...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGTCCCTGCTGCAGCGCTaGCAGAGCAGCCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQSLLQR*QSSLGS
Trigger: AGAGCCTAGGCTGCTCTGGCAGCGCTGCAGCAGGGA...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAACTCTGGTACGCAGCTaGCTCGTCCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKTLVRS*LVQCSG
Trigger: TCCGGAGCACTGGACGAGGCAGCTGCGTACCAGAGT...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp TGTTTCCCTGGCTTCACAGACTCCACTTCTCCACTAGAAAGAAACTGGTGTCAAACTCTGGTACGCAGCTaGCTCGTCCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: CFPGFTDSTSPLERNWCQTLVRS*LVQCSG
Trigger: TCCGGAGCACTGGACGAGGCAGCTGCGTACCAGAGT...TTGACACCAGTTTCTTTCTAGTGGAGAAGTGGAGTCTGTGAAGCCAGGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACAAGAACCGGGTCCCGCTaGACCCGCGCCATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALCQCQATLQETIIMILTRTGSR*TRAMQA
Trigger: AGCCTGCATGGCGCGGGTGCAGCGGGACCCGGTTCT...TGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCATTTTGAATGAGGCAGCTGTGAAGAGAGTGTaGCAGGATGAGGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: VSPDYPLEPSRALILNEAAVKRV*QDEEAA
Trigger: CGCCGCTTCCTCATCCTGGCACACTCTCTTCACAGC...TGCCTCATTCAAAATGAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGCTGTGAAGAGAGTGTaGCAGGATGAGGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAAVKRV*QDEEAA
Trigger: CGCCGCTTCCTCATCCTGGCACACTCTCTTCACAGC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGCACTCTGCTCACCATaGCGCCAGGGTACCACACAT +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERALCSP*RQGTTH
Trigger: ATGTGTGGTACCCTGGCGGCATGGTGAGCAGAGTGC...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp GGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAAGCACTCTGCTCACCATaGCGCCAGGGTACCACACAT +
Preference number: 4 (lower is better)
Translates to: GWLASSPGEAEIWSLFTEALCSP*RQGTTH
Trigger: ATGTGTGGTACCCTGGCGGCATGGTGAGCAGAGTGC...TTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGCACTCTGCTCACCATaGCGCCAGGGTACCACACAT +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHALCSP*RQGTTH
Trigger: ATGTGTGGTACCCTGGCGGCATGGTGAGCAGAGTGC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGGCTAGAGAGCAAGGCTaGAAAGGAGTCGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGAREQG*KGVGLV
Trigger: AACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGC...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGGCTAGAGAGCAAGGCTaGAAAGGAGTCGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMAREQG*KGVGLV
Trigger: AACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGC...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR GCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATCGTCCACGTGTAAGTTaGGGAAGCCAGGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHRPRVS*GSQARP
Trigger: AGGCCTTGCCTGGCTTCCGCAACTTACACGTGGACG...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR GCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTGAAATGCAGCTTTGGTaGAGGGCTGGGAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICEMQLW*RAGKGQ
Trigger: CTGCCCCTTCCCAGCCCTGCACCAAAGCTGCATTTC...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGGCTATGCAGGGGCCATaGTCGGGTAGTTACTGGGCT +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVAMQGP*SGSYWA
Trigger: AGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGC...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACTCAGACAGACACAGTTaGTTCTTGTCCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNSDRHS*FLSKVT
Trigger: TGTCACCTTGGACAAGAAGCAACTGTGTCTGTCTGA...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGACTCCTCGGTAGGTCTTaGACGGCGGCCGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRLLGRS*TAAEGR
Trigger: TCTACCCTCGGCCGCCGTCCAAGACCTACCGAGGAG...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CTAAGGGGGAAATACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCCTGGGGCCCGGGTTCTaGATCACTTCGCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: LRGKYELPNTQIKMATGTLGPGF*ITSRTL
Trigger: GAGCGTGCGCGAAGTGATCCAGAACCCGGGCCCCAG...GGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTATTTCCCCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACAGCAGCAGCAGCAAACTaGCGCCGGGAGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ALCQCQATLQETIIMILTAAAAN*RREVLR
Trigger: GCGCAGCACCTCCCGGCGCCAGTTTGCTGCTGCTGC...TGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp ACTAGAAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGAGCAGCAGCAGCAAACTaGCGCCGGGAGGTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TRKKLVSIWKLWSRERTRAAAAN*RREVLR
Trigger: GCGCAGCACCTCCCGGCGCCAGTTTGCTGCTGCTGC...TCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTTCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCACCTCTACGATGGGCTTaGGGAGAACCATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSPLRWA*GEPSSP
Trigger: GGGTGAGGATGGTTCTCCCCAAGCCCATCGTAGAGG...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATCCTCTACGATGGGCTTaGGGAGAACCATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHPLRWA*GEPSSP
Trigger: GGGTGAGGATGGTTCTCCCCAAGCCCATCGTAGAGG...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTCCTCTACGATGGGCTTaGGGAGAACCATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPPLRWA*GEPSSP
Trigger: GGGTGAGGATGGTTCTCCCCAAGCCCATCGTAGAGG...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGGTGGGGCCTCTACGATaGGCTTGGGGAGAACCATCC +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVVGPLR*AWGEPS
Trigger: GGATGGTTCTCCCCAAGCCCATCGTAGAGGCCCCAC...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTGGACCAGGTAGCCTGTaGGGCCTCTACGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSGPGSL*GLYDGL
Trigger: AAGCCCATCGTAGAGGCCCCACAGGCTACCTGGTCC...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTATTAAGCCGGGGAAAGTaGGGCCCAGCAGGGACAACG +
Preference number: 4 (lower is better)
Translates to: NGNHYYFYSPSSQHPCEVLSRGK*GPAGTT
Trigger: CGTTGTCCCTGCTGGGCCCCACTTTCCCCGGCTTAA...TACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGATGGCGTTGTCAGAAATaGTCGAAGTGCCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRWRCQK*SKCPLS
Trigger: ACTTAGGGGGCACTTCGACCATTTCTGACAACGCCA...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATCCGAAGCTGTTCCCCTaGACTCAGATGCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHPKLFP*TQMLQR
Trigger: GCGTTGGAGCATCTGAGTCCAGGGGAACAGCTTCGG...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCCCGAAGCTGTTCCCCTaGACTCAGATGCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISPKLFP*TQMLQR
Trigger: GCGTTGGAGCATCTGAGTCCAGGGGAACAGCTTCGG...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGCCGAAGCTGTTCCCCTaGACTCAGATGCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: CGYSKARCKRESRTVVSQPKLFP*TQMLQR
Trigger: GCGTTGGAGCATCTGAGTCCAGGGGAACAGCTTCGG...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTCCGAAGCTGTTCCCCTaGACTCAGATGCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICPKLFP*TQMLQR
Trigger: GCGTTGGAGCATCTGAGTCCAGGGGAACAGCTTCGG...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGTCTCCTCAGTGGGGCTaGTGGTGCTGGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVSPQWG*WCWKPL
Trigger: GAGAGGCTTCCAGCACCACCAGCCCCACTGAGGAGA...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAATCTCCTCAGTGGGGCTaGTGGTGCTGGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKSPQWG*WCWKPL
Trigger: GAGAGGCTTCCAGCACCACCAGCCCCACTGAGGAGA...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR CCA 90 bp GGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTACACCTGGCTCAATGGCGGACATTCAGAAAGATaGGCTGACATTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: GVGLVVVVSSTHYTWLNGGHSER*ADIHSL
Trigger: AAGGCTATGAATGTCAGCCCATCTTTCTGAATGTCC...GCCATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR CCA 90 bp AGAGCAAGGCTGCAAAGGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTACTACACCTGGCTCAATaGCTTCCAGGACATTCAGAA +
Preference number: 4 (lower is better)
Translates to: RARLQRSRAGCCRVQHTLLHLAQ*LPGHSE
Trigger: TTCTGAATGTCCTGGAAGCCATTGAGCCAGGTGTAG...TAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR CCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGAGCACACACTACACCTaGCTCAATGGCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKSTHYT*LNGFQD
Trigger: GTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCT...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCAGGGACCAAGGCTGTaGGCAGGTACTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCQGPRL*AGTDAP
Trigger: TGGAGCATCAGTACCTGCCCACAGCCTTGGTCCCTG...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGGAGGGTATCATCTCTaGGGGACAAGGGCAAGACGC +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAGGYHL*GTRARR
Trigger: GCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAGGAAGGAAACCCTTGTaGATCATATCATGTCACTCA +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPGRKPL*IISCHS
Trigger: TGAGTGACATGATATGATCCACAAGGGTTTCCTTCC...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGACTTGGGTAGGCTTTTaGCCCCAAGTTTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKTWVGF*PQVWAF
Trigger: GAAGGCCCAAACTTGGGGCCAAAAGCCTACCCAAGT...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCCATTAGGGGGCCACTaGTCAATCACTTGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGPLGGH*SITWVG
Trigger: GCCTACCCAAGTGATTGACCAGTGGCCCCCTAATGG...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGAAAACACCCTACCTGTaGGCAGAAATGGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRKTPYL*AEMDLH
Trigger: GTGCAGGTCCATTTCTGCCCACAGGTAGGGTGTTTT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CAGTGTCCCAGGGCACACCCTGAGTTCATGGGTGGCAAAGTATTGGAGCCACACTGTTCTAGTCTTTGGTaGGCAATGGAATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QCPRAHPEFMGGKVLEPHCSSLW*AMESAA
Trigger: AGCTGCAGATTCCATTGCCCACCAAAGACTAGAACA...GTGTGGCTCCAATACTTTGCCACCCATGAACTCAGGGTGTGCCCTGGGACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGAGAGATAATGCAAATCTaGCCTGTCACCTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGEIMQI*PVTSAE
Trigger: CTCTGCAGAGGTGACAGGCCAGATTTGCATTATCTC...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGCAGAACACTAGCGCTTaGAGCTGGTCCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERQNTSA*SWSCCP
Trigger: TGGGCAGCAGGACCAGCTCCAAGCGCTAGTGTTCTG...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCAGCTGGCTTCTTCTCCTaGAGAAGCAGAAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: QHPCEVGKHYWSRWRESAAGFFS*RSRNLV
Trigger: GACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGC...TGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp ACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATATATTTGAGTCTGGCTTaGGAGAAGAATGAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TEPELHCIRLSQCLAPIIYLSLA*EKNERL
Trigger: AAGCCTCTCATTCTTCTCCCAAGCCAGACTCAAATA...TATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp ACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATAAAACTGGTGTCAATATaGAAGCTATGGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TEPELHCIRLSQCLAPIIKLVSI*KLWSRE
Trigger: CTCTCTGCTCCATAGCTTCCATATTGACACCAGTTT...TATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGTAAACTGGTGTCAATATaGAAGCTATGGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LVPLEGVSNQESSPQPQRKLVSI*KLWSRE
Trigger: CTCTCTGCTCCATAGCTTCCATATTGACACCAGTTT...ACGTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATCTGAGAGTAGCCGACTaGGGCAGCTGCGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDLRVAD*GSCGRE
Trigger: TTCTCTCCCGCAGCTGCCTCAGTCGGCTACTCTCAG...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GTCAGCCTTTCTTCAGGGTCTGGTCATTTTGAGATGCTTGCAATTGCCAACCCGACGCAAAAAGCGCTCTaGCAGCCTCAAAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: VSLSSGSGHFEMLAIANPTQKAL*QPQSLV
Trigger: CACGAGACTTTGAGGCTGTCAGAGCGCTTTTTGCGT...CGGGTTGGCAATTGCAAGCATCTCAAAATGACCAGACCCTGAAGAAAGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCTCCTGCTGCTGTTGCTaGAGGAGTTGCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISSCCCC*RSCMVL
Trigger: CAGCACCATGCAACTCCTTCAGCAACAGCAGCAGGA...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR TCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTTCCTGCTGCTGTTGCTaGAGGAGTTGCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICSCCCC*RSCMVL
Trigger: CAGCACCATGCAACTCCTTCAGCAACAGCAGCAGGA...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACGCGGGTTCTCCAGCTTaGTGCGAGCGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNAGSPA*CERGDG
Trigger: CCCATCCCCACGCTCGCATCAAGCTGGAGAACCCGC...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAAACTCTAGCGGGTTCTCCAGCTTaGTGCGAGCGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GVNMEAMEQRENKIFQTLAGSPA*CERGDG
Trigger: CCCATCCCCACGCTCGCATCAAGCTGGAGAACCCGC...TAGAGTTTGGAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGGGCCTTCTTCGGCTGTaGAGAGAGTGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVGLLRL*RECARM
Trigger: CATCCTGGCACACTCTCTTCACAGCCGAAGAAGGCC...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGACACATCAGGTGCGGTaGAGTCGCTTTCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQTHQVR*SRFPGP
Trigger: CGGGCCAGGAAAGCGACTTCACCGCACCTGATGTGT...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGAGGCCCATTTCGCTTTTaGCACAAGTGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LSPISKVSSWQHTTKSKRGPFRF*HKWDWD
Trigger: ATCCCAGTCCCACTTGTGTCAAAAGCGAAATGGGCC...TCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATAGCCTTCAATGTGTaGCACTGTCAGCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRIAFNV*HCQLLG
Trigger: ACCCAGAAGCTGACAGTGTCACACATTGAAGGCTAT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATAGCCTTCAATGTGTaGCACTGTCAGCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTIAFNV*HCQLLG
Trigger: ACCCAGAAGCTGACAGTGTCACACATTGAAGGCTAT...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR TCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTAGGCCTTGGCCCACTTaGCCACGTGTACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSRPWPT*PRVQAV
Trigger: GACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCT...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTCCCATCCAGGAGTACTaGATGACAGCCATCTGGTCG +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAPIQEY*MTAIWS
Trigger: CGACCAGATGGCTGTCATTCAGTACTCCTGGATGGG...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTAGTCCAGGAGCTTGGTaGGCTGGTAGAAGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICSPGAW*AGRSVL
Trigger: CAAGACGCTTCTACCAGCTCACCAAGCTCCTGGACT...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGTCCCTGACTCACACATaGGAAAGCAGACCTGGATCC +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGSLTHT*ESRPGS
Trigger: GGATCCAGGTCTGCTTTCTCATGTGTGAGTCAGGGA...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CTTCTCCACTTGCTGGGAGGGTATCATCTCTGGGGGACAAGGGCAAGACGCCCAGGTAAGAAATCTTTGTaGCTACTGGCATCTACAGAT +
Preference number: 4 (lower is better)
Translates to: LLHLLGGYHLWGTRARRPGKKSL*LLASTD
Trigger: ATCTGTAGATGCCAGTAGTCACAAAGATTTCTTACC...TGGGCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCCCAGCAAGTGGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGAGGCGAGCTGCCCAATaGACGAGAGCTGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVRRAAQ*TRAETA
Trigger: GGCAGTTTCAGCTCTCGTTCATTGGGCAGCTCGCCT...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGACACCTCAATCTCAGGTaGGGGAATTTGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGHLNLR*GNLCER
Trigger: TCTTTCACACAAATTCCCTCACCTGAGATTGAGGTG...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp CAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGCTAGAGCCCTCATTTTaGATGAGGCAAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QGDTLSPISKVSSWQHTTLEPSF*MRQVSL
Trigger: AAGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAG...CGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp CATGATACTCACAACTACATGAATGGTAACCACTATTACTTCTACAGCCCGTCCTTCACTGCATCCGCCTaGGTCAGTGCCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: HDTHNYMNGNHYYFYSPSFTASA*VSAWPP
Trigger: TGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAA...GGACGGGCTGTAGAAGTAATAGTGGTTACCATTCATGTAGTTGTGAGTATCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACGAAAAGCAAGCGACTaGGCCAGAGCTTCACTGCAT +
Preference number: 4 (lower is better)
Translates to: LSPISKVSSWQHTTKSKRRKASD*ARASLH
Trigger: ATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCG...TCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAAAGGGAGTTACCTCTCTaGAAACTCGGGCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQRELPL*KLGLAA
Trigger: CGCTGCCAGCCCGAGTTTGCAGAGAGGTAACTCCCT...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AAATTCTGCCCTGAGAAGGGGGAAACTCCCCTCCTGAAGTCCTTCCTTGGCTTTAGCCTCAAAGTCTCGTaGAGAAGAAGACACACGGTG +
Preference number: 4 (lower is better)
Translates to: KFCPEKGETPLLKSFLGFSLKVS*RRRHTV
Trigger: CACCGTGTGTCTTCTTCTGCACGAGACTTTGAGGCT...AAAGCCAAGGAAGGACTTCAGGAGGGGAGTTTCCCCCTTCTCAGGGCAGAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTGCTGCTGCTGCTGCTaGAGCAGCAGCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDCCCCC*SSSKLA
Trigger: CGCCAGTTTGCTGCTGCTGCAGCAGCAGCAGCAGCA...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACACCATCCTCACCCTGCTaGTGCTGCTGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALCQCQATLQETIIMILTPSSPC*CCCCLG
Trigger: CCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGG...TGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGTGCGGCTGTGAAGGTTaGTGTTCCTCATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: CGYSKARCKRESRTVVSQCGCEG*CSSSRT
Trigger: GGTCCTGGATGAGGAACAGCAACCTTCACAGCCGCA...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAATGCGGCTGTGAAGGTTaGTGTTCCTCATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GWLASSPGEAEIWSLFTECGCEG*CSSSRT
Trigger: GGTCCTGGATGAGGAACAGCAACCTTCACAGCCGCA...TTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTTAAAGATCCTCGTCCGGAGGTaGTGGCAGCTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VNKHNLTLGHMRIITDLKILVRR*WQLLRQ
Trigger: CTGCCGCAGCAGCTGCCAGCACCTCCGGACGAGGAT...CTTTAAATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGAGGTCAGCGGAGCAGCTaGTTAAGCCGGGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRGQRSS*LSRGKW
Trigger: CCACTTTCCCCGGCTTAAGCAGCTGCTCCGCTGACC...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGTCATAAAATGGGCTGGCATGAGGTCCACTGCATGCCAGCTGGCTCTGAAATTCATGGACACCGACACTaGCTTACACAACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SHKMGWHEVHCMPAGSEIHGHRH*LTQLLG
Trigger: GCCAAGGAGTTGTGTAAGGCAGTGTCGGTGTCCATG...AATTTCAGAGCCAGCTGGCATGCAGTGGACCTCATGCCAGCCCATTTTATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR GCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGTATCTTCAGTGCTCTTaGCTGCGCTGTCGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRYLQCS*LRCRLA
Trigger: TGCTAGACGACAGCGCAGGCAAGAGCACTGAAGATA...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCTATCTTCAGTGCTCTTaGCTGCGCTGTCGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFYLQCS*LRCRLA
Trigger: TGCTAGACGACAGCGCAGGCAAGAGCACTGAAGATA...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAACAGCAGTATCTTCAGTaGTCTTGCCTGCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: HLESHQQSFFLAAHHEKQQQYLQ*SCLRCR
Trigger: ACGACAGCGCAGGCAAGAGCACTGAAGATACTGCTG...TTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCAGCTGCCTCGTCCAGTaGTCCGGACTTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCSCLVQ*SGLVER
Trigger: TCTCTCTACAAGTCCGGAGCACTGGACGAGGCAGCT...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCAGCTGCCTCGTCCAGTaGTCCGGACTTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISSCLVQ*SGLVER
Trigger: TCTCTCTACAAGTCCGGAGCACTGGACGAGGCAGCT...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTAGCTGCCTCGTCCAGTaGTCCGGACTTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ECGYSKARCKRESRTVVSSCLVQ*SGLVER
Trigger: TCTCTCTACAAGTCCGGAGCACTGGACGAGGCAGCT...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCGTACCACACATCAGGTaGGGTGAAGTCGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FYSPSSQHPCEVGKHYWSVPHIR*GEVAFL
Trigger: CAGGAAAGCGACTTCACCGCACCTGATGTGTGGTAC...GGACCAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTCGTCCACGTGTAAGTTaGGGAAGCCAGGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSRPRVS*GSQARP
Trigger: AGGCCTTGCCTGGCTTCCGCAACTTACACGTGGACG...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GCCTTGGCCCACTTGACCACGTGTACAAGCTGTCTCTCTCCCAGTTCATTGAGGCACAGAGATGATCTCTaGCATCATTTCCGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: ALAHLTTCTSCLSPSSLRHRDDL*HHFRKV
Trigger: GACTTTCCGGAAATGATGGCAGAGATCATCTCTGTG...CCTCAATGAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR GCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGCTCTGGGGTCACTCTaGCCTCTAATGGCAATAGCC +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAALGSL*PLMAIA
Trigger: GGCTATTGCCATTAGAGGGCAGAGTGACCCCAGAGC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGCTCTGGGGTCACTCTaGCCTCTAATGGCAATAGCC +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERALGSL*PLMAIA
Trigger: GGCTATTGCCATTAGAGGGCAGAGTGACCCCAGAGC...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGGCAAGACGCCCAGCTTaGCTGATCCCTTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVARRPA*LIPLMP
Trigger: AGGCATCAAAGGGATCAGGCAAGCTGGGCGTCTTGC...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGCAAGACGCCCAGCTTaGCTGATCCCTTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERARRPA*LIPLMP
Trigger: AGGCATCAAAGGGATCAGGCAAGCTGGGCGTCTTGC...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCTGGCCTGTCACCTCTaGAGAGTACAGGTTCCCATA +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMLACHL*RVQVPI
Trigger: TATGGGAACCTGTACTCTGCAGAGGTGACAGGCCAG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGATCCGCCTGAGTCAGTaGCTGGCCCCCATCATATGT +
Preference number: 4 (lower is better)
Translates to: PCLLNFCGSATTFSSVTGIRLSQ*LAPIIC
Trigger: ACATATGATGGGGGCCAGGCACTGACTCAGGCGGAT...CCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAAATCCGCCTGAGTCAGTaGCTGGCCCCCATCATATGT +
Preference number: 4 (lower is better)
Translates to: GWLASSPGEAEIWSLFTEIRLSQ*LAPIIC
Trigger: ACATATGATGGGGGCCAGGCACTGACTCAGGCGGAT...TTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGTCCCATTGGTGCTaGCATGCAGTATGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ECGYSKARCKRESRTVVSQSHWC*HAVWLG
Trigger: CCCAAGCCATACTGCATGGCAGCACCAATGGGACTG...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR GCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTTGGCATGAGGTCCACTaGATGCCAGCTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPWHEVH*MPAGSE
Trigger: TTCAGAGCCAGCTGGCATGCAGTGGACCTCATGCCA...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGTCATCTTTTGATCTCTaGCTCCGCACTCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERSSFDL*LRTRGG
Trigger: CCCACCCCGAGTGCGGAGCCAGAGATCAAAAGATGA...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCCTGGGGCCCGGGTTCTaGATCACTTCGCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: SWQTSKPIFYTMDDISESLGPGF*ITSRTL
Trigger: GAGCGTGCGCGAAGTGATCCAGAACCCGGGCCCCAG...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGCCTCTACGATGGGCTTaGGGAGAACCATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVPLRWA*GEPSSP
Trigger: GGGTGAGGATGGTTCTCCCCAAGCCCATCGTAGAGG...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGCCCCCAACCCCAACGTCAAAGTCTGTGTTGAGGAGCAAAAAGGAGTTGCATGGTGCTaGCCTCGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: IKRVAPNPNVKVCVEEQKGVAWC*PRSGCL
Trigger: AAGACATCCTGAGCGAGGCCAGCACCATGCAACTCC...TTTTTGCTCCTCAACACAGACTTTGACGTTGGGGTTGGGGGCTACTCTCTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTGGAGTTGCATGGTGCTaGCCTCGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPGVAWC*PRSGCL
Trigger: AAGACATCCTGAGCGAGGCCAGCACCATGCAACTCC...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGTGGCGTTGTCAGAAATaGTCGAAGTGCCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKWRCQK*SKCPLS
Trigger: ACTTAGGGGGCACTTCGACCATTTCTGACAACGCCA...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGTGGAACTCCCAAAAGTaGGGCGTACATGCAATCCCC +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGWNSQK*GVHAIP
Trigger: GGGGATTGCATGTACGCCCCACTTTTGGGAGTTCCA...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGAATGGGGCACAAGGAGTaGGACGCACAGCGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRMGHKE*DAQRVE
Trigger: TTCCACCCGCTGTGCGTCCCACTCCTTGTGCCCCAT...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGTTTGCATTCGGCCAATaGGGCACAAGGAGTGGGACG +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQFAFGQ*GTRSGT
Trigger: CGTCCCACTCCTTGTGCCCCATTGGCCGAATGCAAA...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATTTTGCATTCGGCCAATaGGGCACAAGGAGTGGGACG +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHFAFGQ*GTRSGT
Trigger: CGTCCCACTCCTTGTGCCCCATTGGCCGAATGCAAA...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTTTTGCATTCGGCCAATaGGGCACAAGGAGTGGGACG +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAFAFGQ*GTRSGT
Trigger: CGTCCCACTCCTTGTGCCCCATTGGCCGAATGCAAA...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCATTTTGAATGAGGCATCCGGCCAGAGCCAGTaGAAAGTTGTAGTAGTCGCG +
Preference number: 4 (lower is better)
Translates to: VSPDYPLEPSRALILNEASGQSQ*KVVVVA
Trigger: CGCGACTACTACAACTTTCCACTGGCTCTGGCCGGA...TGCCTCATTCAAAATGAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACAAGCTTGATGCGAGCGTaGGGATGGGGAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: ALCQCQATLQETIIMILTSLMRA*GWGGGG
Trigger: TCCGCCGCCTCCCCATCCCCACGCTCGCATCAAGCT...TGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCACGGTCCATACAACTaGCCTTCTTCGGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGHGPYN*PSSAVK
Trigger: CTTCACAGCCGAAGAAGGCCAGTTGTATGGACCGTG...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGGCAAAACATGGTCCCTaGCAGTCTCCAAACGCATGT +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRAKHGP*QSPNAC
Trigger: ACATGCGTTTGGAGACTGCCAGGGACCATGTTTTGC...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp AAGGAGTCGGGCTGGTTGTTGTCGTGTCCAGCACACACTACACCTGGCTCAATGTGCAATCATTTCTGCTaGCGCACAGGTACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: KESGWLLSCPAHTTPGSMCNHFC*RTGTSV
Trigger: AACAGAAGTACCTGTGCGCCAGCAGAAATGATTGCA...CATTGAGCCAGGTGTAGTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR CCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACCCGAAGACGACAAGATaGACAATTTTTCCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNPKTTR*TIFPSE
Trigger: TTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGG...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATGGGTTGTCTCCTCAGTaGGGCTGGTGGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDGLSPQ*GWWCWK
Trigger: CTTCCAGCACCACCAGCCCCACTGAGGAGACAACCC...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGACACTGTCAGCTTCTaGGTTGTCTCCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHDTVSF*VVSSVG
Trigger: CCCCACTGAGGAGACAACCCAGAAGCTGACAGTGTC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGGACACTGTCAGCTTCTaGGTTGTCTCCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQDTVSF*VVSSVG
Trigger: CCCCACTGAGGAGACAACCCAGAAGCTGACAGTGTC...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGGCAAAGGAGTCGGGCTaGTTGTTGTCGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQAKESG*LLSCPA
Trigger: TGCTGGACACGACAACAACCAGCCCGACTCCTTTGC...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCGCAAAGGAGTCGGGCTaGTTGTTGTCGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISAKESG*LLSCPA
Trigger: TGCTGGACACGACAACAACCAGCCCGACTCCTTTGC...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCAGGGACCAAGGCTGTaGGCAGGTACTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSQGPRL*AGTDAP
Trigger: TGGAGCATCAGTACCTGCCCACAGCCTTGGTCCCTG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCCTTCACAGGACCTGTaGGTCAAACCCAATAGGGGA +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMPSQDL*VKPNRG
Trigger: TCCCCTATTGGGTTTGACCCACAGGTCCTGTGAAGG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGACTAGCGCTTGGAGCTaGTCCTGCTGCCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQTSAWS*SCCPVE
Trigger: CTCCACTGGGCAGCAGGACCAGCTCCAAGCGCTAGT...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGCAGAACACTAGCGCTTaGAGCTGGTCCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVQNTSA*SWSCCP
Trigger: TGGGCAGCAGGACCAGCTCCAAGCGCTAGTGTTCTG...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CCTGAAGTCCTTCCTTGGCTTTTCTCCAGAATGTTGCTGAGTCAGGGGAAAGAGAAGAGAGGGGTTGGCTaGCTTCTTCTCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PEVLPWLFSRMLLSQGKEKRGVG*LLLLEK
Trigger: CTTCTCCAGGAGAAGAAGCCAGCCAACCCCTCTCTT...CTCTTTCCCCTGACTCAGCAACATTCTGGAGAAAAGCCAAGGAAGGACTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCACTGCATCCGCCTGAGTAAACTGGTGTCAATATaGAAGCTATGGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AHHEKQATEPELHCIRLSKLVSI*KLWSRE
Trigger: CTCTCTGCTCCATAGCTTCCATATTGACACCAGTTT...ACTCAGGCGGATGCAGTGAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 72 bp CTGGTCAATCACTTGGGTAGGCTTTTGGCCCCAAGTTaGGGCCTTCCCTGTGGTAAATCTCAGTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LVNHLGRLLAPS*GLPCGKSQSVP
Trigger: TGGAACTGACTGAGATTTACCACAGGGAAGGCCCAAACTTGGGGCCAAAAGCCTACCCAAGTGATTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CAA 72 bp CCAGACTATCCACTAGAGCCCTCTAGAGCCCTCATTTaGAATGAGGCAAGTCAGCCTTTCTTCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PDYPLEPSRALI*NEASQPFFRVW
Trigger: CCAGACCCTGAAGAAAGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TCTAGTGCAAAATCTAGTACTTTAAATGCTCCCTTATCAGCAAGGGTTTCACATTCGTGGCTGCAGTGCTaGAGCCGCTCCCCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: SSAKSSTLNAPLSARVSHSWLQC*SRSPVA
Trigger: GGCGACTGGGGAGCGGCTTCAGCACTGCAGCCACGA...ATGTGAAACCCTTGCTGATAAGGGAGCATTTAAAGTACTAGATTTTGCACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTACGCAAAAAGCGCTCTaGCAGCCTCAAAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICTQKAL*QPQSLV
Trigger: CACGAGACTTTGAGGCTGTCAGAGCGCTTTTTGCGT...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCTCAGACAGACACGGCCGACTGCGGCTGTaGAGGTTGCTGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: YELPNTQIKMATGTSDRHGRLRL*RLLFLI
Trigger: GATGAGGAACAGCAACCTTCACAGCCGCAGTCGGCC...GTGTCTGTCTGAGGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGTGGTGTAACCTCCCTTaGAAGGGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMWCNLP*KGNTQQ
Trigger: CTGCTGAGTATTCCCCTTTCAAGGGAGGTTACACCA...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCTGGTGTAACCTCCCTTaGAAGGGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FYSPSSQHPCEVGKHYWSWCNLP*KGNTQQ
Trigger: CTGCTGAGTATTCCCCTTTCAAGGGAGGTTACACCA...GGACCAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp ATCAAGAGAGTAGCCCCCAACCCCAACGTCAAAGTCTGTGTTGAGGAGCAAAAAGGCCCATTTCGCTTTTaGCACAAGTGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: IKRVAPNPNVKVCVEEQKGPFRF*HKWDWD
Trigger: ATCCCAGTCCCACTTGTGTCAAAAGCGAAATGGGCC...TTTTTGCTCCTCAACACAGACTTTGACGTTGGGGTTGGGGGCTACTCTCTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GCCTTTCTTCAGGGTCTGGTCATTTTGAGATGCTTGCAATTGCCAACCCGGAATGGCCCATTTCGCTTTTaGCACAAGTGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: AFLQGLVILRCLQLPTRNGPFRF*HKWDWD
Trigger: ATCCCAGTCCCACTTGTGTCAAAAGCGAAATGGGCC...ATTCCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAGACCCTGAAGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGCCCATTTCGCTTTTaGCACAAGTGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERGPFRF*HKWDWD
Trigger: ATCCCAGTCCCACTTGTGTCAAAAGCGAAATGGGCC...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTTGCAGCTTCCACATGTaGGAGCTCCATAGTGACACC +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLACSFHM*ELHSDT
Trigger: GGTGTCACTATGGAGCTCTCACATGTGGAAGCTGCA...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCTCCAGGAGTACTGAATaGCAGCCATCTGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISSRSTE*QPSGRP
Trigger: TGGACGACCAGATGGCTGTCATTCAGTACTCCTGGA...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTCCATGGCAAACACCATaGGCCCCATCCAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSPWQTP*APSRST
Trigger: AGTACTCCTGGATGGGGCTCATGGTGTTTGCCATGG...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTGCATGCGGTACTCATTaGAAACCAGATCAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAACGTH*KPDQGR
Trigger: TCGCCCCTGATCTGGTTTTCAATGAGTACCGCATGC...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGCATGCGGTACTCATTaGAAACCAGATCAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERACGTH*KPDQGR
Trigger: TCGCCCCTGATCTGGTTTTCAATGAGTACCGCATGC...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR TCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGAGCCATCCAAACTCTTaGGAGAGGTGCCTCATTCGG +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQSHPNS*ERCLIR
Trigger: CCGAATGAGGCACCTCTCTCAAGAGTTTGGATGGCT...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CCCAGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGTTAGCAGGTCAAAAGTaGACTGATGCAGCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: PRKDLGHLHRDDLCHHFRLAGQK*TDAALS
Trigger: CGAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAA...CCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR TCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGTCCCTGACTCACACATaGGAAAGCAGACCTGGATCC +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVSLTHT*ESRPGS
Trigger: GGATCCAGGTCTGCTTTCTCATGTGTGAGTCAGGGA...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTGCTCCAGCTCCTCCCTaGCTCACACATGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSAPAPP*LTHEKA
Trigger: TGCTTTCTCATGTGTGAGTCAGGGAGGAGCTGGAGC...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGGGTGGGGAATCTGAGTaGGTATGGGCAATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVGGESE*VWAMSE
Trigger: CTCTGACATTGCCCATACTCACTCAGATTCCCCACC...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAATTGCGTGGGTCATTCTaGTGGTGGCTGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQLRGSF*WWLLSA
Trigger: TGCTGACAGCAGCCACCATCAGAATGACCCACGCAA...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGAAGATGGAACAGATaGCCTCCGAGGAATCCCTCT +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMRRWNR*PPRNPS
Trigger: AGAGGGATTCCTCGGAGGTCATCTGTTCCATCTTCT...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp CTCCTAAGCCTCAGACGCCAGGTTTCTCCAGACTATCCACTAGAGCCCTCTAGACTCACAACATCCCTGTaGGGTAGGAAAACACTATTG +
Preference number: 4 (lower is better)
Translates to: LLSLRRQVSPDYPLEPSRLTTSL*GRKTLL
Trigger: CAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAG...TCTAGAGGGCTCTAGTGGATAGTCTGGAGAAACCTGGCGTCTGAGGCTTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACATTCACTGCATCCGCCTaGGTCAGTGCCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ALCQCQATLQETIIMILTFTASA*VSAWPP
Trigger: TGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAA...TGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TTGCTTCTTGTCCAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGGCTTCTTGTCCAAGGTaGCACCTTGAGTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LLLVQGDTLSPISKVSSWASCPR*HLESHQ
Trigger: CTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGC...CCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GCCTTTCTTCAGGGTCTGGTCATTTTGAGATGCTTGCAATTGCCAACCCGGAATGCTTCTTGTCCAAGGTaGCACCTTGAGTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: AFLQGLVILRCLQLPTRNASCPR*HLESHQ
Trigger: CTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGC...ATTCCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAGACCCTGAAGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGCCTGCTTCTTGTCCAAGGTaGCACCTTGAGTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: CLLNFCGSATTFSSVTGPASCPR*HLESHQ
Trigger: CTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGC...AGGCCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp ATGAATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGCTACCTTCAGCTCAGTaGCAGGGCCTGAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: MNGNHYYFYSPSSQHPCELPSAQ*QGLRLR
Trigger: TCTTAGCCTCAGGCCCTGTCACTGAGCTGAAGGTAG...CTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAAACGGTGGACAAGATCTaGCCTGCTAGGCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQTVDKI*PARLTV
Trigger: GACTGTGAGCCTAGCAGGGCAGATCTTGTCCACCGT...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGTTTCCCTGGCTTCACAGACTCCACTTCTCCACTAGAAAGAAACTGGTGTCAAACGGTGGACAAGATCTaGCCTGCTAGGCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: CFPGFTDSTSPLERNWCQTVDKI*PARLTV
Trigger: GACTGTGAGCCTAGCAGGGCAGATCTTGTCCACCGT...TTGACACCAGTTTCTTTCTAGTGGAGAAGTGGAGTCTGTGAAGCCAGGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGAAGCCTCAAAGTCTCGTaGAGAAGAAGACACACGGTG +
Preference number: 4 (lower is better)
Translates to: LSPISKVSSWQHTTKSKRSLKVS*RRRHTV
Trigger: CACCGTGTGTCTTCTTCTGCACGAGACTTTGAGGCT...TCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGATGCTGCTGCTGCTGCTaGTGCTGCAGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRCCCCC*CCSSSK
Trigger: TTTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCAGCA...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CTAAGGGGGAAATACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCCACTCCAGGGCCGACTaGGGCTGTGAAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRGKYELPNTQIKMATGTHSRAD*GCEGCC
Trigger: ACAGCAACCTTCACAGCCGCAGTCGGCCCTGGAGTG...GGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTATTTCCCCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCATCCTCGTCCGGAGGTaGTGGCAGCTGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KETGVNMEAMEQRENKIFILVRR*WQLLRQ
Trigger: CTGCCGCAGCAGCTGCCAGCACCTCCGGACGAGGAT...GAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCCGCTGGAGGGAGTCAGCACAGAAATGGTCGAAGTaGCCCCTAAGTAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: QHPCEVGKHYWSRWRESAQKWSK*PLSNCP
Trigger: AGGACAATTACTTAGGGGGCACTTCGACCATTTCTG...TGCTGACTCCCTCCAGCGGGACCAATAGTGTTTTCCTACCTCACAGGGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGCATGGACACCGACACTaGCTTACACAACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQHGHRH*LTQLLG
Trigger: GCCAAGGAGTTGTGTAAGGCAGTGTCGGTGTCCATG...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CATGATACTCACAACTACATGAATGGTAACCACTATTACTTCTACAGCCCGTCCTCCCCTGGACTCAGATaGTCCAACGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: HDTHNYMNGNHYYFYSPSSPGLR*SNASTP
Trigger: GGGTGTGGAGGCGTTGGAGCATCTGAGTCCAGGGGA...GGACGGGCTGTAGAAGTAATAGTGGTTACCATTCATGTAGTTGTGAGTATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACACAGATCCCGGAGCTCCCTGCTaGAGCGCTGCCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HMRIITDLKAYNTIQNTDPGAPC*SAARAA
Trigger: GGCTGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGG...ATCTGTGTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CTAAGGGGGAAATACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCACTCTGGTACGCAGCTaGCTCGTCCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: LRGKYELPNTQIKMATGTTLVRS*LVQCSG
Trigger: TCCGGAGCACTGGACGAGGCAGCTGCGTACCAGAGT...GGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTATTTCCCCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCGTACCACACATCAGGTaGGGTGAAGTCGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISVPHIR*GEVAFL
Trigger: CAGGAAAGCGACTTCACCGCACCTGATGTGTGGTAC...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGTCCCAGAGTCATCCCTaGTTCATAACATTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRSQSHP*FITFPK
Trigger: CTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGA...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAATCTCTCGCAATAGGCTaGACGGAGTCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKSLAIG*TESRSL
Trigger: CAAGCTCCTGGACTCCGTGCAGCCTATTGCGAGAGA...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCACAGAGATGATCTCTaGCATCATTTCCGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRHRDDL*HHFRKV
Trigger: GACTTTCCGGAAATGATGGCAGAGATCATCTCTGTG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGATGGTGAAGACCAAGGGTAGCCCCTTTAGCTaGTCTAAAGAAGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: PGSNAGNCPSLTRMVKTKGSPFS*SKEGSE
Trigger: CTCACTTCCTTCTTTAGAGCAGCTAAAGGGGCTACC...CTTGGTCTTCACCATCCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGAGACAAGAAGAGCATTTaGAGGGTTTCTGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGDKKSI*RVSGSS
Trigger: ACTAGAACCAGAAACCCTGCAAATGCTCTTCTTGTC...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTATTTTTCCAGGGCTATaGAGGGGCCATGCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAIFPGL*RGHARV
Trigger: TACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCTGGCCTGTCACCTCTaGAGAGTACAGGTTCCCATA +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCLACHL*RVQVPI
Trigger: TATGGGAACCTGTACTCTGCAGAGGTGACAGGCCAG...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCATGAGGTCCACTGCATaGCAGCTGGCTCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: FYSPSSQHPCEVGKHYWSMRSTA*QLALKF
Trigger: GAATTTCAGAGCCAGCTGGCATGCAGTGGACCTCAT...GGACCAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR CCA 90 bp TGTGTTGAGGAGCAAAAACCTAAGCTCCTAAGCCTCAGACGCCAGGTTTCTCCAGAAGAAGACACACGGTaGACAAGATCTGCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: CVEEQKPKLLSLRRQVSPEEDTR*TRSALL
Trigger: TAGCAGGGCAGATCTTGTCCACCGTGTGTCTTCTTC...TGGAGAAACCTGGCGTCTGAGGCTTAGGAGCTTAGGTTTTTGCTCCTCAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGACTTCGCGCACGCTCTaGAACAGATTCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMTSRTL*NRFWKA
Trigger: AGCTTTCCAGAATCTGTTCCAGAGCGTGCGCGAAGT...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCTCAGACAGACACGTGGGGCCTCTACGATaGGCTTGGGGAGAACCATCC +
Preference number: 4 (lower is better)
Translates to: YELPNTQIKMATGTSDRHVGPLR*AWGEPS
Trigger: GGATGGTTCTCCCCAAGCCCATCGTAGAGGCCCCAC...GTGTCTGTCTGAGGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAACCTCTCTCGGGGTaGCACTCCAGGGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: KETGVNMEAMEQRENKIFQPLSG*HSRADC
Trigger: GCAGTCGGCCCTGGAGTGCCACCCCGAGAGAGGTTG...GAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATCCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDPAGTT*MGQLSH
Trigger: ATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGG...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTGGAGTTGCATGGTGCTaGCCTCGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSGVAWC*PRSGCL
Trigger: AAGACATCCTGAGCGAGGCCAGCACCATGCAACTCC...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTGGAGTTGCATGGTGCTaGCCTCGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSGVAWC*PRSGCL
Trigger: AAGACATCCTGAGCGAGGCCAGCACCATGCAACTCC...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGTGGAACTCCCAAAAGTaGGGCGTACATGCAATCCCC +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVWNSQK*GVHAIP
Trigger: GGGGATTGCATGTACGCCCCACTTTTGGGAGTTCCA...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CATGATACTCACAACTACATGAATGGTAACCACTATTACTTCTACAGCCCGTCCATGGGGCACAAGGAGTaGGACGCACAGCGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HDTHNYMNGNHYYFYSPSMGHKE*DAQRVE
Trigger: TTCCACCCGCTGTGCGTCCCACTCCTTGTGCCCCAT...GGACGGGCTGTAGAAGTAATAGTGGTTACCATTCATGTAGTTGTGAGTATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTTCCGGCCAGAGCCAGTaGAAAGTTGTAGTAGTCGCG +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSSGQSQ*KVVVVA
Trigger: CGCGACTACTACAACTTTCCACTGGCTCTGGCCGGA...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTTCCGGCCAGAGCCAGTaGAAAGTTGTAGTAGTCGCG +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSSGQSQ*KVVVVA
Trigger: CGCGACTACTACAACTTTCCACTGGCTCTGGCCGGA...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGCACGGTCCATACAACTaGCCTTCTTCGGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERHGPYN*PSSAVK
Trigger: CTTCACAGCCGAAGAAGGCCAGTTGTATGGACCGTG...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp ATCAAGAGAGTAGCCCCCAACCCCAACGTCAAAGTCTGTGTTGAGGAGCAAAAACACGGTCCATACAACTaGCCTTCTTCGGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: IKRVAPNPNVKVCVEEQKHGPYN*PSSAVK
Trigger: CTTCACAGCCGAAGAAGGCCAGTTGTATGGACCGTG...TTTTTGCTCCTCAACACAGACTTTGACGTTGGGGTTGGGGGCTACTCTCTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGGACACTGTCAGCTTCTaGGTTGTCTCCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVDTVSF*VVSSVG
Trigger: CCCCACTGAGGAGACAACCCAGAAGCTGACAGTGTC...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATAGCACACACTACACCTaGCTCAATGGCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHSTHYT*LNGFQD
Trigger: GTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCT...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTGCAAAGGAGTCGGGCTaGTTGTTGTCGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSAKESG*LLSCPA
Trigger: TGCTGGACACGACAACAACCAGCCCGACTCCTTTGC...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCCTCATTCGGACACACTaGCTGTACATCCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISLIRTH*LYIRDL
Trigger: CAAGTCCCGGATGTACAGCCAGTGTGTCCGAATGAG...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGGGCATGAGCTGGGGTaGGGAAATAGGGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHGHELG*GNRVSN
Trigger: ATTGGAAACCCTATTTCCCCACCCCAGCTCATGCCC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGAACTTCTCCACTTGCTaGGAGGGTATCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGNFSTC*EGIISG
Trigger: CCCAGAGATGATACCCTCCCAGCAAGTGGAGAAGTT...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTTGGGTGGCAAAGTATTaGAGCCACACCAACCAGACC +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICWVAKY*SHTNQT
Trigger: GGTCTGGTTGGTGTGGCTCCAATACTTTGCCACCCA...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp ATTTTTCCAGGGCTATGCAGGGGCCATGCTCGGGTAGTTACTGGGCTGTCTGGATCAGATAAGCTAACATaGGCACTAGCAAACACAGTG +
Preference number: 4 (lower is better)
Translates to: IFPGLCRGHARVVTGLSGSDKLT*ALANTV
Trigger: CACTGTGTTTGCTAGTGCCCATGTTAGCTTATCTGA...TCCAGACAGCCCAGTAACTACCCGAGCATGGCCCCTGCATAGCCCTGGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGACTTGGGTAGGCTTTTaGCCCCAAGTTTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQTWVGF*PQVWAF
Trigger: GAAGGCCCAAACTTGGGGCCAAAAGCCTACCCAAGT...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TATTGGTCCCGCTGGAGGGAGTCAGCAATCAAGAGAGTAGCCCCCAACCCCAACGGAGAAGCAGAAATCTaGTCCTTGTTTACTGAACTT +
Preference number: 4 (lower is better)
Translates to: YWSRWRESAIKRVAPNPNGEAEI*SLFTEL
Trigger: AAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCC...GTTGGGGTTGGGGGCTACTCTCTTGATTGCTGACTCCCTCCAGCGGGACCAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAAAAGAGAGGGGTTGGCTaGCTTCTTCTCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GWLASSPGEAEIWSLFTEKRGVG*LLLLEK
Trigger: CTTCTCCAGGAGAAGAAGCCAGCCAACCCCTCTCTT...TTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GTTTCTCCAGACTATCCACTAGAGCCCTCTAGAGCCCTCATTTTGAATGAGGCAAAGAGAGGGGTTGGCTaGCTTCTTCTCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VSPDYPLEPSRALILNEAKRGVG*LLLLEK
Trigger: CTTCTCCAGGAGAAGAAGCCAGCCAACCCCTCTCTT...TGCCTCATTCAAAATGAGGGCTCTAGAGGGCTCTAGTGGATAGTCTGGAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 72 bp CAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTaGGTGGTGGGGGCTCTTAACAGAGAATCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QIDVRAVGLLTF*VVGALNRESVN
Trigger: GTTCACAGATTCTCTGTTAAGAGCCCCCACCACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
3UTR CAA 72 bp CTTCCTCACTCTTCGTCCACATCGAGCACTGCCAACTaGTTTGGAGATGGTCCTTGTGACTTTTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPHSSSTSSTAN*FGDGPCDFSSE
Trigger: CTCACTGGAAAAGTCACAAGGACCATCTCCAAACAAGTTGGCAGTGCTCGATGTGGACGAAGAGTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
3UTR CAA 72 bp AGACAGACACAGTTGCTTCTTGTCCAAGGTGACACCTaGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RQTQLLLVQGDT*SPISKVSSWQH
Trigger: GTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAACTGTGTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTATCCTTGAGCTTGGCTaGATCTTCCACCTACTTCCC +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICILELG*IFHLLP
Trigger: GGGAAGTAGGTGGAAGATTCAGCCAAGCTCAAGGAT...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAAACTCTAGGCCGACTGCGGCTGTaGAGGTTGCTGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: GVNMEAMEQRENKIFQTLGRLRL*RLLFLI
Trigger: GATGAGGAACAGCAACCTTCACAGCCGCAGTCGGCC...TAGAGTTTGGAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp CAAAAAGCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACGTGGATGGGGCAGCTaGGTCATCCTCGTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QKALCQCQATLQETIIMIRGWGS*VILVRR
Trigger: CCTCCGGACGAGGATGACTCAGCTGCCCCATCCACG...TATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGTGGTGTAACCTCCCTTaGAAGGGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERWCNLP*KGNTQQ
Trigger: CTGCTGAGTATTCCCCTTTCAAGGGAGGTTACACCA...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp CCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCAGTGACAGGGTGGTGTAACCTCCCTTaGAAGGGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PCLLNFCGSATTFSSVTGWCNLP*KGNTQQ
Trigger: CTGCTGAGTATTCCCCTTTCAAGGGAGGTTACACCA...CCCTGTCACTGAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACAACACATCAGGTGCGGTaGAGTCGCTTTCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: ALCQCQATLQETIIMILTTHQVR*SRFPGP
Trigger: CGGGCCAGGAAAGCGACTTCACCGCACCTGATGTGT...TGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCTTCAGCGGCTCTTTTaGAGAAGACCTTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCLQRLF*RRPCSF
Trigger: GAAGCTGCAAGGTCTTCTTCAAAAGAGCCGCTGAAG...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGCTTCAGCGGCTCTTTTaGAGAAGACCTTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERLQRLF*RRPCSF
Trigger: GAAGCTGCAAGGTCTTCTTCAAAAGAGCCGCTGAAG...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp AATGGCTTCCAGGACATTCAGAAAGATGGGCTGACATTCATAGCCTTCAATGTGCCCATCCAGGAGTACTaGATGACAGCCATCTGGTCG +
Preference number: 4 (lower is better)
Translates to: NGFQDIQKDGLTFIAFNVPIQEY*MTAIWS
Trigger: CGACCAGATGGCTGTCATTCAGTACTCCTGGATGGG...CACATTGAAGGCTATGAATGTCAGCCCATCTTTCTGAATGTCCTGGAAGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR TCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGACCATGGCAAACACCATaGGCCCCATCCAGGAGTACT +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRPWQTP*APSRST
Trigger: AGTACTCCTGGATGGGGCTCATGGTGTTTGCCATGG...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGTTAGCAGGTCAAAAGTaGACTGATGCAGCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGLAGQK*TDAALS
Trigger: CGAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAA...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGCACTTGCACAGAGATaGTCTCTGCCATCATTTCCG +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHALAQR*SLPSFP
Trigger: CGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCCTTCTCTCTTCTCATaGCTTCTGCAGGTGGATATG +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMPSLFS*LLQVDM
Trigger: CATATCCACCTGCAGAAGTCATGAGAAGAGAGAAGG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATCAAAGGTGGGGAATCTaGGTGAGTATGGGCAATGTC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHQRWGI*VSMGNV
Trigger: GACATTGCCCATACTCACTCAGATTCCCCACCTTTG...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCAGTCCCTCACAGGTaGGTACAGTATACCAACCAT +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCPVPHR*VQYTNH
Trigger: ATGGTTGGTATACTGTACTCACCTGTGAGGGACTGG...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCTGGAGAGAGTCTCCTaGAATGCAGCTTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSLERVS*NAALVQ
Trigger: CTGCACCAAAGCTGCATTTCAGGAGACTCTCTCCAG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAAGTAGTGGGTCAAACATaGAAACCACTCCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQVVGQT*KPLPWP
Trigger: GGGCCAAGGGAGTGGTTTTCATGTTTGACCCACTAC...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGGTGAGGGAATTTGTGTaGAAGATAGAGCGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGVREFV*KIERLL
Trigger: GAGCAAGCGCTCTATCTTTCACACAAATTCCCTCAC...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCAGGTCAAAAGTGAACGCAGTCTCCAAACTGTaGAGCCAGAGTATCATGGGA +
Preference number: 4 (lower is better)
Translates to: SGKSTLTMCDLISRSKVNAVSKL*SQSIMG
Trigger: TCCCATGATACTCTGGCTTCACAGTTTGGAGACTGC...GTTCACTTTTGACCTGCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR GCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGCCAGAGAAGGAAACTTaGGGGAGCAACCACGCAAAA +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQPEKET*GSNHAK
Trigger: TTTTGCGTGGTTGCTCCCGCAAGTTTCCTTCTCTGG...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GCACTTTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACATGCTGCTGCTGCTGCTaGCTGGGGCTAGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ALCQCQATLQETIIMILTCCCCC*LGLVSC
Trigger: GCAAGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCA...TGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACAACTACCCCTGCTGCTGCTGCTaGTGCCTGGGGCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LPMPSHITGNNNHDTHNYPCCCC*CLGLVS
Trigger: AGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGG...GTAGTTGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TCATCCCTGCTTCATAACATTTCCGAAGACGACAAGATGGACAATTTTTCCTTCGAACCATCCTCACCCTaGTGCTGCTGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSLLHNISEDDKMDNFSFEPSSP*CCCCCL
Trigger: CAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGGTTC...GAAGGAAAAATTGTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGATGCGGCTGTGAAGGTTaGTGTTCCTCATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRCGCEG*CSSSRT
Trigger: GGTCCTGGATGAGGAACAGCAACCTTCACAGCCGCA...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp ACTAGAAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGACACTCCAGGGCCGACTaGGGCTGTGAAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TRKKLVSIWKLWSRERTRHSRAD*GCEGCC
Trigger: ACAGCAACCTTCACAGCCGCAGTCGGCCCTGGAGTG...TCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGTATCTTCAGTGCTCTTaGCTGCGCTGTCGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVYLQCS*LRCRLA
Trigger: TGCTAGACGACAGCGCAGGCAAGAGCACTGAAGATA...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTTATCTTCAGTGCTCTTaGCTGCGCTGTCGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: ECGYSKARCKRESRTVVSYLQCS*LRCRLA
Trigger: TGCTAGACGACAGCGCAGGCAAGAGCACTGAAGATA...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGCAGCAGTATCTTCAGTaGTCTTGCCTGCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVQQYLQ*SCLRCR
Trigger: ACGACAGCGCAGGCAAGAGCACTGAAGATACTGCTG...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGCTTCATAACATTTCCGAAGACGACAAGATGGACAATTTTTCCTTCGGAATTTTGTCCCGGAGCTCCCTaGTGCAGCGCTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CFITFPKTTRWTIFPSEFCPGAP*CSAARA
Trigger: TGCTCTGGCAGCGCTGCAGCAGGGAGCTCCGGGACA...AAATTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCACTCTGGTACGCAGCTaGCTCGTCCAGTGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SWQTSKPIFYTMDDISESTLVRS*LVQCSG
Trigger: TCCGGAGCACTGGACGAGGCAGCTGCGTACCAGAGT...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTGTACCACACATCAGGTaGGGTGAAGTCGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSVPHIR*GEVAFL
Trigger: CAGGAAAGCGACTTCACCGCACCTGATGTGTGGTAC...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACTGGGATAGGGCACTCTaGTCACCATGCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNWDRAL*SPCRQG
Trigger: ACCCTGGCGGCATGGTGAGCAGAGTGCCCTATCCCA...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGTCTCTCGCAATAGGCTaGACGGAGTCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQSLAIG*TESRSL
Trigger: CAAGCTCCTGGACTCCGTGCAGCCTATTGCGAGAGA...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCAGGATCTTGGGCACTTaGACAGAGATGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISRILGT*TEMISA
Trigger: GGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCT...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR GCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTAATTCCCCAAGGCACTaGAGAGGAGTAGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLANSPRH*RGVVQS
Trigger: ACTCTGCACTACTCCTCTGCAGTGCCTTGGGGAATT...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGAACTCCCCATGGGCCTaGAATTTTCACCTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVNSPWA*NFHLLV
Trigger: GACGAGAAGGTGAAAATTGCAGGCCCATGGGGAGTT...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGAACTCCCCATGGGCCTaGAATTTTCACCTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERNSPWA*NFHLLV
Trigger: GACGAGAAGGTGAAAATTGCAGGCCCATGGGGAGTT...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGGACAAGAAGAGCATTTaGAGGGTTTCTGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRDKKSI*RVSGSS
Trigger: ACTAGAACCAGAAACCCTGCAAATGCTCTTCTTGTC...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp GTCAGTGTCCTAAGCAGGAGAACAGCCAAGCTATCATTTTCTTCTCCTCTGGCTTGGGCCTTTATGCCCTaGCAGATATCAAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VSVLSRRTAKLSFSSPLAWAFMP*QISRER
Trigger: TCTCTCCCTTGATATCTGGCAGGGCATAAAGGCCCA...AGCCAGAGGAGAAGAAAATGATAGCTTGGCTGTTCTCCTGCTTAGGACACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGTGGCCTGGGCCTTTATaGCCTGCCAGATATCAAGGG +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQWPGPL*PARYQG
Trigger: CCCTTGATATCTGGCAGGGCATAAAGGCCCAGGCCA...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCATTCTGATGGTGGCTaGTGTCAGCATCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSHSDGG*CQHPSG
Trigger: GCCACTTGGATGCTGACAGCAGCCACCATCAGAATG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGTGTCAGTCCCATTGGTaGTGCCATGCAGTATGGCTT +
Preference number: 4 (lower is better)
Translates to: CGYSKARCKRESRTVVSQCQSHW*CHAVWL
Trigger: AAGCCATACTGCATGGCAGCACCAATGGGACTGACA...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR CCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCGAAGAAGACACACGGTaGACAAGATCTGCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCEEDTR*TRSALL
Trigger: TAGCAGGGCAGATCTTGTCCACCGTGTGTCTTCTTC...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGACTTCGCGCACGCTCTaGAACAGATTCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERTSRTL*NRFWKA
Trigger: AGCTTTCCAGAATCTGTTCCAGAGCGTGCGCGAAGT...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp TGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTCAGACTTCGCGCACGCTCTaGAACAGATTCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: CGYSKARCKRESRTVVSQTSRTL*NRFWKA
Trigger: AGCTTTCCAGAATCTGTTCCAGAGCGTGCGCGAAGT...CTGAGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CCTTCCATCATAAAACTTAAGTATGATTCAAAGGCCATGAGACAGCTTTCAAGTCTGGGGCCCGGGTTCTaGATCACTTCGCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: PSIIKLKYDSKAMRQLSSLGPGF*ITSRTL
Trigger: GAGCGTGCGCGAAGTGATCCAGAACCCGGGCCCCAG...ACTTGAAAGCTGTCTCATGGCCTTTGAATCATACTTAAGTTTTATGATGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR CCA 90 bp CATGATACTCACAACTACATGAATGGTAACCACTATTACTTCTACAGCCCGTCCCCAGCAGGGACAACGTaGATGGGGCAGCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: HDTHNYMNGNHYYFYSPSPAGTT*MGQLSH
Trigger: ATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGG...GGACGGGCTGTAGAAGTAATAGTGGTTACCATTCATGTAGTTGTGAGTATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGTGGCGTTGTCAGAAATaGTCGAAGTGCCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVWRCQK*SKCPLS
Trigger: ACTTAGGGGGCACTTCGACCATTTCTGACAACGCCA...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCATGTGTGACTTGATTAGCTGGCGTTGTCAGAAATaGTCGAAGTGCCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: ISAIISGKSTLTMCDLISWRCQK*SKCPLS
Trigger: ACTTAGGGGGCACTTCGACCATTTCTGACAACGCCA...GCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396044.8
CDS-3UTR CCA 90 bp TTGCTTCTTGTCCAAGGTGACACCTTGAGTCCCATCAGCAAAGTTTCTTCCTGGTGGCGTTGTCAGAAATaGTCGAAGTGCCCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LLLVQGDTLSPISKVSSWWRCQK*SKCPLS
Trigger: ACTTAGGGGGCACTTCGACCATTTCTGACAACGCCA...CCAGGAAGAAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGACAAGAAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAATGGAACTCCCAAAAGTaGGGCGTACATGCAATCCCC +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQWNSQK*GVHAIP
Trigger: GGGGATTGCATGTACGCCCCACTTTTGGGAGTTCCA...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CCTTCGGAATTTATCAATAGTGCAATCATTTCTGCTGGCGCACAGGTACTTCTGTCCGGCCAGAGCCAGTaGAAAGTTGTAGTAGTCGCG +
Preference number: 4 (lower is better)
Translates to: PSEFINSAIISAGAQVLLSGQSQ*KVVVVA
Trigger: CGCGACTACTACAACTTTCCACTGGCTCTGGCCGGA...CAGAAGTACCTGTGCGCCAGCAGAAATGATTGCACTATTGATAAATTCCGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR CCA 90 bp GTTTCCCTAAATAGTCATAAAATGGGCTGGCATGAGGTCCACTGCATGCCAGCTGCAAAACATGGTCCCTaGCAGTCTCCAAACGCATGT +
Preference number: 4 (lower is better)
Translates to: VSLNSHKMGWHEVHCMPAAKHGP*QSPNAC
Trigger: ACATGCGTTTGGAGACTGCCAGGGACCATGTTTTGC...AGCTGGCATGCAGTGGACCTCATGCCAGCCCATTTTATGACTATTTAGGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCCGAAGACGACAAGATaGACAATTTTTCCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRPKTTR*TIFPSE
Trigger: TTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAGTCCACGCTCACCGGACATTCAGAAAGATaGGCTGACATTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: GTCTEMISAIISGKSTLTGHSER*ADIHSL
Trigger: AAGGCTATGAATGTCAGCCCATCTTTCTGAATGTCC...GGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR CCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCTACACCTGGCTCAATaGCTTCCAGGACATTCAGAA +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGLHLAQ*LPGHSE
Trigger: TTCTGAATGTCCTGGAAGCCATTGAGCCAGGTGTAG...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR CCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAAGCACACACTACACCTaGCTCAATGGCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKSTHYT*LNGFQD
Trigger: GTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCT...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCTCATTCGGACACACTaGCTGTACATCCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSLIRTH*LYIRDL
Trigger: CAAGTCCCGGATGTACAGCCAGTGTGTCCGAATGAG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAACTCATTCGGACACACTaGCTGTACATCCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQLIRTH*LYIRDL
Trigger: CAAGTCCCGGATGTACAGCCAGTGTGTCCGAATGAG...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTAACTTCTCCACTTGCTaGGAGGGTATCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICNFSTC*EGIISG
Trigger: CCCAGAGATGATACCCTCCCAGCAAGTGGAGAAGTT...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TACTGGCATCTACAGATAGATGTCAGAGCTGTTGGCCTGCTAACCTTCTTGGTGCACACCCTGAGTTCATaGGTGGCAAAGTATTGGAGC +
Preference number: 4 (lower is better)
Translates to: YWHLQIDVRAVGLLTFLVHTLSS*VAKYWS
Trigger: GCTCCAATACTTTGCCACCCATGAACTCAGGGTGTG...CACCAAGAAGGTTAGCAGGCCAACAGCTCTGACATCTATCTGTAGATGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACGCAGAGGAAGTGGCCTaGGCCTTTATGCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNAEEVA*AFMPCQ
Trigger: CTGGCAGGGCATAAAGGCCCAGGCCACTTCCTCTGC...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCCTTTAGTCTGTCTTTaGACAGCTTATCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRPLVCL*TAYQRG
Trigger: GCCTCTTTGATAAGCTGTCCAAAGACAGACTAAAGG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGAAAACACCCTACCTGTaGGCAGAAATGGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQKTPYL*AEMDLH
Trigger: GTGCAGGTCCATTTCTGCCCACAGGTAGGGTGTTTT...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTGTCTTTGGTGGGCAATaGAATCTGCAGCTCCATGAC +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICVFGGQ*NLQLHD
Trigger: GTCATGGAGCTGCAGATTCCATTGCCCACCAAAGAC...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATGTCTTTGGTGGGCAATaGAATCTGCAGCTCCATGAC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHVFGGQ*NLQLHD
Trigger: GTCATGGAGCTGCAGATTCCATTGCCCACCAAAGAC...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TGTGTTGAGGAGCAAAAACCTAAGCTCCTAAGCCTCAGACGCCAGGTTTCTCCAAGCAAAGTTTCTTCCTaGCAGCACACCACGAAAAGC +
Preference number: 4 (lower is better)
Translates to: CVEEQKPKLLSLRRQVSPSKVSS*QHTTKS
Trigger: GCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCT...TGGAGAAACCTGGCGTCTGAGGCTTAGGAGCTTAGGTTTTTGCTCCTCAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp GAGCTTCACTGCATCCGCCTGAGTCAGTGCCTGGCCCCCATCATATGTGATCAATCAATATGGAAGCTATaGAGCAGAGAGAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: ELHCIRLSQCLAPIICDQSIWKL*SRERTR
Trigger: TCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGA...TTGATCACATATGATGGGGGCCAGGCACTGACTCAGGCGGATGCAGTGAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CCTGAAGTCCTTCCTTGGCTTTTCTCCAGAATGTTGCTGAGTCAGGGGAAAGAGACATGTGTGTTTCCCTaGCTTCACAGACTCCACTTC +
Preference number: 4 (lower is better)
Translates to: PEVLPWLFSRMLLSQGKETCVFP*LHRLHF
Trigger: GAAGTGGAGTCTGTGAAGCCAGGGAAACACACATGT...CTCTTTCCCCTGACTCAGCAACATTCTGGAGAAAAGCCAAGGAAGGACTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
3UTR CAA 72 bp GATGGGCTTGACTTTCCCAGAAAGGATCTTGGGCACTaGCACAGAGATGATCTCTGCCATCATTTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: DGLDFPRKDLGH*HRDDLCHHFRK
Trigger: TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCTGGGAAAGTCAAGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR TCA 90 bp TTGCCAATGCCAAGCCACATTACAGGAAACAATAATCATGATACTCACAACTACGGCCGACTGCGGCTGTaGAGGTTGCTGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LPMPSHITGNNNHDTHNYGRLRL*RLLFLI
Trigger: GATGAGGAACAGCAACCTTCACAGCCGCAGTCGGCC...GTAGTTGTGAGTATCATGATTATTGTTTCCTGTAATGTGGCTTGGCATTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTGCTTCATAACATTTCCGAATGGTGTAACCTCCCTTaGAAGGGGAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CQPGIFLPESSLLHNISEWCNLP*KGNTQQ
Trigger: CTGCTGAGTATTCCCCTTTCAAGGGAGGTTACACCA...TTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATGGCCCATTTCGCTTTTaGCACAAGTGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDGPFRF*HKWDWD
Trigger: ATCCCAGTCCCACTTGTGTCAAAAGCGAAATGGGCC...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGATGCAGCTTCCACATGTaGGAGCTCCATAGTGACACC +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRCSFHM*ELHSDT
Trigger: GGTGTCACTATGGAGCTCTCACATGTGGAAGCTGCA...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCACTGGTAGAAGCGTCTTaGGCAGGATGTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSLVEAS*AGCGIF
Trigger: AAAAATCCCACATCCTGCTCAAGACGCTTCTACCAG...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp AGGCACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGCTGGTAGAAGCGTCTTaGGCAGGATGTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RHCRGVVQSYNRQKTSERLVEAS*AGCGIF
Trigger: AAAAATCCCACATCCTGCTCAAGACGCTTCTACCAG...CCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR TCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATTTAGCAGGTCAAAAGTaGACTGATGCAGCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHLAGQK*TDAALS
Trigger: CGAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAA...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR TCA 90 bp AAATCTCTGCTCTCCTTCTTCTCAGTGGTCAGACTTTTCTGTGGAAGTCGCCAAGCACTTGCACAGAGATaGTCTCTGCCATCATTTCCG +
Preference number: 4 (lower is better)
Translates to: KSLLSFFSVVRLFCGSRQALAQR*SLPSFP
Trigger: CGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGC...TTGGCGACTTCCACAGAAAAGTCTGACCACTGAGAAGAAGGAGAGCAGAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTGCACTTGCACAGAGATaGTCTCTGCCATCATTTCCG +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSALAQR*SLPSFP
Trigger: CGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGC...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATATGGGAAGCAAAGTCTaGAGGTGCCATGGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDMGSKV*RCHGRV
Trigger: AACCCTCCCATGGCACCTTCAGACTTTGCTTCCCAT...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR TCA 90 bp GTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATTTAAAGGCTGTGGGCAGGTACTaGTGCTCCATTGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VNKHNLTLGHMRIITDLKAVGRY*CSIALL
Trigger: AAGGAGGGCAATGGAGCATCAGTACCTGCCCACAGC...CTTTAAATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCGCTGTGGGCAGGTACTaGTGCTCCATTGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SWQTSKPIFYTMDDISESAVGRY*CSIALL
Trigger: AAGGAGGGCAATGGAGCATCAGTACCTGCCCACAGC...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GGAATTTGTGTGAAAGATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCAGGGCTCCAGCGATCTaGGAGTTGGTAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: GICVKDRALAPGSNAGNCRAPAI*ELVRNL
Trigger: AAGATTTCTTACCAACTCTCAGATCGCTGGAGCCCT...GCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATCTTTCACACAAATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGAGGGCTCCAGCGATCTaGGAGTTGGTAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQRAPAI*ELVRNL
Trigger: AAGATTTCTTACCAACTCTCAGATCGCTGGAGCCCT...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTTCCCACCCTGGTAATTaGGTTTTCTCTTCAACCCTG +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICSHPGN*VFSSTL
Trigger: CAGGGTTGAAGAGAAAACTCAATTACCAGGGTGGGA...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGAGAGCGCATGCAAAATaGGACTTCTGTCAATTACAT +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRRAHAK*DFCQLH
Trigger: ATGTAATTGACAGAAGTCTCATTTTGCATGCGCTCT...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp GATAGAGCGCTTGCTCCAGGTTCCAATGCAGGAAACTGCCCTTCTCTCACAAGGCTCAGTCAGTTCCATTaGGTTTTTATGCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: DRALAPGSNAGNCPSLTRLSQFH*VFMLST
Trigger: TGTGGAAAGCATAAAAACTCAATGGAACTGACTGAG...CCTTGTGAGAGAAGGGCAGTTTCCTGCATTGGAACCTGGAGCAAGCGCTCTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCACCTCAATCTCAGGTaGGGGAATTTGTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMHLNLR*GNLCER
Trigger: TCTTTCACACAAATTCCCTCACCTGAGATTGAGGTG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR TCA 90 bp AGGTGTGCCAAAAGACTATATAAAACCAGTGTCCCAGGGCACACCCTGAGTTCATGCCACCGTGAGAAATaGGCCCCATCTAAAGAGATT +
Preference number: 4 (lower is better)
Translates to: RCAKRLYKTSVPGHTLSSCHREK*APSKEI
Trigger: AATCTCTTTAGATGGGGCTCATTTCTCACGGTGGCA...TGAACTCAGGGTGTGCCCTGGGACACTGGTTTTATATAGTCTTTTGGCACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR TCA 90 bp TTCTACAGCCCGTCCTCACAACATCCCTGTGAGGTAGGAAAACACTATTGGTCCAGGGTCTGGTCATTTTaGGATGCTTGCAATTGCCAA +
Preference number: 4 (lower is better)
Translates to: FYSPSSQHPCEVGKHYWSRVWSF*DACNCQ
Trigger: TTGGCAATTGCAAGCATCTCAAAATGACCAGACCCT...GGACCAATAGTGTTTTCCTACCTCACAGGGATGTTGTGAGGACGGGCTGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GGTTGGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACTAGAGCCCTCATTTTaGATGAGGCAAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GWLASSPGEAEIWSLFTELEPSF*MRQVSL
Trigger: AAGGCTGACTTGCCTCATTCAAAATGAGGGCTCTAG...TTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp GAGTGTGGCTACAGTAAGGCTAGATGTAAGAGGGAAAGTCGGACTGTAGTCTCTTCCAAGGTGACACCTTaGGTCCCATCAGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: ECGYSKARCKRESRTVVSSKVTP*VPSAKF
Trigger: AAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGA...AGAGACTACAGTCCGACTTTCCCTCTTACATCTAGCCTTACTGTAGCCACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp TGTGTGTTTCCCTGGCTTCACAGACTCCACTTCTCCACTAGAAAGAAACTGGTGTCCAAGGTGACACCTTaGGTCCCATCAGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: CVFPWLHRLHFSTRKKLVSKVTP*VPSAKF
Trigger: AAACTTTGCTGATGGGACTCAAGGTGTCACCTTGGA...CACCAGTTTCTTTCTAGTGGAGAAGTGGAGTCTGTGAAGCCAGGGAAACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR TCA 90 bp AGATGCTTGCAATTGCCAACCCGGAATTTTTCTCCCAGAGTCATCCCTGCTTCAGAGAAGCATGTGATGTaGGAGAGCAATCAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RCLQLPTRNFSPRVIPASEKHVM*ESNQGV
Trigger: CACTCCTTGATTGCTCTCTCACATCACATGCTTCTC...TGAAGCAGGGATGACTCTGGGAGAAAAATTCCGGGTTGGCAATTGCAAGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACAGGGAGTTACCTCTCTaGAAACTCGGGCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNRELPL*KLGLAA
Trigger: CGCTGCCAGCCCGAGTTTGCAGAGAGGTAACTCCCT...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TCTAGTGCAAAATCTAGTACTTTAAATGCTCCCTTATCAGCAAGGGTTTCACATAGGGTTCTCTCCGCGTaGAGCCTAACCAGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SSAKSSTLNAPLSARVSHRVLSA*SLTRRV
Trigger: GACCCGCCTGGTTAGGCTGCACGCGGAGAGAACCCT...ATGTGAAACCCTTGCTGATAAGGGAGCATTTAAAGTACTAGATTTTGCACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR GCA 90 bp CCTTCCATCATAAAACTTAAGTATGATTCAAAGGCCATGAGACAGCTTTCAAGTTCACCCTGCTGCTGCTaGTGCTGCCTGGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: PSIIKLKYDSKAMRQLSSSPCCC*CCLGLV
Trigger: GACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGA...ACTTGAAAGCTGTCTCATGGCCTTTGAATCATACTTAAGTTTTATGATGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514029.5
CDS-3UTR GCA 90 bp TGCTTCATAACATTTCCGAAGACGACAAGATGGACAATTTTTCCTTCGGAATTTTCCTCACCCTGCTGCTaGTGCTGCTGCCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: CFITFPKTTRWTIFPSEFSSPCC*CCCLGL
Trigger: TAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGA...AAATTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TGGCTGGCACAGAGTAGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGCAGAAATGGTCGAAGTaGCCCCTAAGTAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: WLAQSSAVNKHNLTLGHMQKWSK*PLSNCP
Trigger: AGGACAATTACTTAGGGGGCACTTCGACCATTTCTG...CATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACTACTCTGTGCCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp TTTTTCTCCCAGAGTCATCCCTGCTTCATAACATTTCCGAAGACGACAAGATGGCTAGCAGAGAACCTTTaGATTCGGCCAATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: FFSQSHPCFITFPKTTRWLAENL*IRPMGH
Trigger: GTGCCCCATTGGCCGAATGCAAAGGTTCTCTGCTAG...CCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp CATGATACTCACAACTACATGAATGGTAACCACTATTACTTCTACAGCCCGTCCAGCTGCCTCGTCCAGTaGTCCGGACTTGTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HDTHNYMNGNHYYFYSPSSCLVQ*SGLVER
Trigger: TCTCTCTACAAGTCCGGAGCACTGGACGAGGCAGCT...GGACGGGCTGTAGAAGTAATAGTGGTTACCATTCATGTAGTTGTGAGTATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TTGGTGTATGGATATGTGTGTGTTCTAGTCTTTGGTGGGCAATGGAATCTGCAGGTACCACACATCAGGTaGGGTGAAGTCGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LVYGYVCVLVFGGQWNLQVPHIR*GEVAFL
Trigger: CAGGAAAGCGACTTCACCGCACCTGATGTGTGGTAC...CTGCAGATTCCATTGCCCACCAAAGACTAGAACACACACATATCCATACACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGTCCCAGAGTCATCCCTaGTTCATAACATTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGSQSHP*FITFPK
Trigger: CTTCGGAAATGTTATGAAGCAGGGATGACTCTGGGA...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000396044.8
ENST00000612452.5
CDS-3UTR GCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGAGGATCTTGGGCACTTaGACAGAGATGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVRILGT*TEMISA
Trigger: GGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCT...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGAAAGGATCTTGGGCACTTGCACAGAGATGATCTCTGCCATCATTTCCGGAAAAGGATCTTGGGCACTTaGACAGAGATGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RKDLGHLHRDDLCHHFRKRILGT*TEMISA
Trigger: GGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCT...TTTCCGGAAATGATGGCAGAGATCATCTCTGTGCAAGTGCCCAAGATCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396043.3
ENST00000396044.8
CDS-3UTR GCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTAATTCCCCAAGGCACTaGAGAGGAGTAGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSNSPRH*RGVVQS
Trigger: ACTCTGCACTACTCCTCTGCAGTGCCTTGGGGAATT...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTAGGGAGGACATAAGGTaGTTGTGGCTTCACGGAGTT +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSREDIR*LWLHGV
Trigger: AACTCCGTGAAGCCACAAGCACCTTATGTCCTCCCT...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATCATTCTGATGGTGGCTaGTGTCAGCATCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDHSDGG*CQHPSG
Trigger: GCCACTTGGATGCTGACAGCAGCCACCATCAGAATG...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGACAATAACTCGATCCTaGAGCCATAACAGGGGATGT +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGTITRS*SHNRGC
Trigger: ACATCCCCTGTTATGGCTGCAGGATCGAGTTATTGT...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR GCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACCGAGGAATCCCTCTCTaGTCGCAGCACCTACGCATG +
Preference number: 4 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNRGIPL*SQHLRM
Trigger: CATGCGTAGGTGCTGCGAGCAGAGAGGGATTCCTCG...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396043.3
CDS-3UTR GCA 90 bp GGCTGGCTTCTTCTCCTGGAGAAGCAGAAATCTGGTCCTTGTTTACTGAACTTCCTGGTCATTTTGAGATaGTTGCAATTGCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: GWLLLLEKQKSGPCLLNFLVILR*LQLPTR
Trigger: CCGGGTTGGCAATTGCAAGCATCTCAAAATGACCAG...GAAGTTCAGTAAACAAGGACCAGATTTCTGCTTCTCCAGGAGAAGAAGCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp ACTAGAAAGAAACTGGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGAGAGCCAGAGCTTCACTaGATCCGCCTGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: TRKKLVSIWKLWSRERTREPELH*IRLSQC
Trigger: GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTC...TCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACCAGTTTCTTTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp GGTGTCAATATGGAAGCTATGGAGCAGAGAGAGAACAAGATATTCCAAACTCTAGAGCCAGAGCTTCACTaGATCCGCCTGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GVNMEAMEQRENKIFQTLEPELH*IRLSQC
Trigger: GCACTGACTCAGGCGGATGCAGTGAAGCTCTGGCTC...TAGAGTTTGGAATATCTTGTTCTCTCTCTGCTCCATAGCTTCCATATTGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp TTGAGTCCCATCAGCAAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGATCAGACAGACACAGTTaGTTCTTGTCCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: LSPISKVSSWQHTTKSKRSDRHS*FLSKVT
Trigger: TGTCACCTTGGACAAGAAGCAACTGTGTCTGTCTGA...TCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTTGCTGATGGGACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR GCA 90 bp AAAGTTTCTTCCTGGCAGCACACCACGAAAAGCAAGCGACTGAGCCAGAGCTTCTGGAGATTAAAATTCTaGCCTGAGAAGGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: KVSSWQHTTKSKRLSQSFWRLKF*PEKGET
Trigger: AGTTTCCCCCTTCTCAGGGCAGAATTTTAATCTCCA...GAAGCTCTGGCTCAGTCGCTTGCTTTTCGTGGTGTGCTGCCAGGAAGAAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp CTGGGCCATATGAGGATCATCACAGATTTAAAGGCATACAACACCATTCAAAACCGCTCCCCAGTCGCCTaGCTCCTAAGAGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGHMRIITDLKAYNTIQNRSPVA*LLRAFF
Trigger: AAAGAAGGCTCTTAGGAGCCAGGCGACTGGGGAGCG...GTTTTGAATGGTGTTGTATGCCTTTAAATCTGTGATGATCCTCATATGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GAAATCTGGTCCTTGTTTACTGAACTTCTGTGGATCAGCTACTACCTTCAGCTCTGGAACTCCCAAAAGTaGGGCGTACATGCAATCCCC +
Preference number: 4 (lower is better)
Translates to: EIWSLFTELLWISYYLQLWNSQK*GVHAIP
Trigger: GGGGATTGCATGTACGCCCCACTTTTGGGAGTTCCA...GAGCTGAAGGTAGTAGCTGATCCACAGAAGTTCAGTAAACAAGGACCAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp TACGAATTGCCTAATACACAAATAAAGATGGCCACAGGAACCTCAGACAGACACTTTGCATTCGGCCAATaGGGCACAAGGAGTGGGACG +
Preference number: 4 (lower is better)
Translates to: YELPNTQIKMATGTSDRHFAFGQ*GTRSGT
Trigger: CGTCCCACTCCTTGTGCCCCATTGGCCGAATGCAAA...GTGTCTGTCTGAGGTTCCTGTGGCCATCTTTATTTGTGTATTAGGCAATTCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504326.5
ENST00000514029.5
ENST00000613054.2
CDS-3UTR CCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATCACGGTCCATACAACTaGCCTTCTTCGGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDHGPYN*PSSAVK
Trigger: CTTCACAGCCGAAGAAGGCCAGTTGTATGGACCGTG...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp ATGAATGGTAACCACTATTACTTCTACAGCCCGTCCTCACAACATCCCTGTGAGGCAAAACATGGTCCCTaGCAGTCTCCAAACGCATGT +
Preference number: 4 (lower is better)
Translates to: MNGNHYYFYSPSSQHPCEAKHGP*QSPNAC
Trigger: ACATGCGTTTGGAGACTGCCAGGGACCATGTTTTGC...CTCACAGGGATGTTGTGAGGACGGGCTGTAGAAGTAATAGTGGTTACCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504326.5
ENST00000514029.5
CDS-3UTR CCA 90 bp ATGCAGTGTGATGAAATTCAGGCCCACAAAACACTGAAGGGAGGACATAAGGTGGCAAAACATGGTCCCTaGCAGTCTCCAAACGCATGT +
Preference number: 4 (lower is better)
Translates to: MQCDEIQAHKTLKGGHKVAKHGP*QSPNAC
Trigger: ACATGCGTTTGGAGACTGCCAGGGACCATGTTTTGC...CACCTTATGTCCTCCCTTCAGTGTTTTGTGGGCCTGAATTTCATCACACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGTGCTGTAAACAAGCACAACTTGACACTGGGCCATATGAGGATCATCACAGATAGCACACACTACACCTaGCTCAATGGCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SAVNKHNLTLGHMRIITDSTHYT*LNGFQD
Trigger: GTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCT...ATCTGTGATGATCCTCATATGGCCCAGTGTCAAGTTGTGCTTGTTTACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374690.9
ENST00000396043.3
ENST00000612452.5
CDS-3UTR CCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTATGCACAGGAATTCCTaGGGGGTGATTTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSMHRNS*GVIWSH
Trigger: ATGGCTCCAAATCACCCCCCAGGAATTCCTGTGCAT...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp TGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGCATATGAGAAAGCAGACCTaGATCCAAATGGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: CRGVVQSYNRQKTSERGHMRKQT*IQMGPY
Trigger: GTAAGGCCCCATTTGGATCCAGGTCTGCTTTCTCAT...ATGCCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTGACATAAGGTGCTTGTaGCTTCACGGAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSDIRCL*LHGVWQ
Trigger: CTGCCAAACTCCGTGAAGCCACAAGCACCTTATGTC...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCGGAGGGTATCATCTCTaGGGGACAAGGGCAAGACGC +
Preference number: 4 (lower is better)
Translates to: SWQTSKPIFYTMDDISESGGYHL*GTRARR
Trigger: GCGTCTTGCCCTTGTCCCCCAGAGATGATACCCTCC...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGAAAGCAGACCTGGATCCAAATGGGGCCTTACAAAGGGTTAAATCTCTGCTCTTCTTCAACCCTGATCTaGGTAGCCCCTTTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RKQTWIQMGPYKGLNLCSSSTLI*VAPLAA
Trigger: AGCAGCTAAAGGGGCTACCCAGATCAGGGTTGAAGA...AGAGCAGAGATTTAACCCTTTGTAAGGCCCCATTTGGATCCAGGTCTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp GTGTTTCAGGTCACAAGGGCCACCCATTCTAAGGCTTCTCATTTAATTCCCCAGCATGACTTCTGCAGGTaGATATGCTGGGTGACAAGA +
Preference number: 4 (lower is better)
Translates to: VFQVTRATHSKASHLIPQHDFCR*ICWVTR
Trigger: TCTTGTCACCCAGCATATCCACCTGCAGAAGTCATG...CTGGGGAATTAAATGAGAAGCCTTAGAATGGGTGGCCCTTGTGACCTGAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp AGCACACAGACACCCAGTAACAAGAGCACCTCAATCTCAGGTGAGGGAATTTGTCATGACTTCTGCAGGTaGATATGCTGGGTGACAAGA +
Preference number: 4 (lower is better)
Translates to: STQTPSNKSTSISGEGICHDFCR*ICWVTR
Trigger: TCTTGTCACCCAGCATATCCACCTGCAGAAGTCATG...ACAAATTCCCTCACCTGAGATTGAGGTGCTCTTGTTACTGGGTGTCTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374690.9
ENST00000612452.5
CDS-3UTR CCA 90 bp CACTGCAGAGGAGTAGTGCAGAGTTATAACAGGCAGAAGACATCTGAAAGGGGGAGTAAACTCACCAGATaGTGTCCATCTGGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: HCRGVVQSYNRQKTSERGSKLTR*CPSGFR
Trigger: CCTAAAGCCAGATGGACACCATCTGGTGAGTTTACT...CCCCCTTTCAGATGTCTTCTGCCTGTTATAACTCTGCACTACTCCTCTGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp AGCTGGCAGACCAGTAAGCCAATATTTTACACAATGGATGACATTTCTGAAAGCCCTGAAATGCAGCTTTaGTGCAGGGCTGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SWQTSKPIFYTMDDISESPEMQL*CRAGKG
Trigger: CCCCTTCCCAGCCCTGCACCAAAGCTGCATTTCAGG...GCTTTCAGAAATGTCATCCATTGTGTAAAATATTGGCTTACTGGTCTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp AATGTCATGTCTGAGGCACTCCCTAATCAATGTTCCAGTCTAGAGGAAAGCAGATGCTCGGGTAGTTACTaGGCTGTCTGGAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NVMSEALPNQCSSLEESRCSGSY*AVWRES
Trigger: AGACTCTCTCCAGACAGCCCAGTAACTACCCGAGCA...TCTGCTTTCCTCTAGACTGGAACATTGATTAGGGAGTGCCTCAGACATGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374690.9
CDS-3UTR CCA 90 bp GAAAGCAGAGGCAGAGACAGACCCAAAGTCACACATGTAGTCCAACAAACAAGTCACTGGTCAATCACTTaGGTAGGCTTTTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: ESRGRDRPKVTHVVQQTSHWSIT*VGFWPQ
Trigger: TTGGGGCCAAAAGCCTACCCAAGTGATTGACCAGTG...ACTTGTTTGTTGGACTACATGTGTGACTTTGGGTCTGTCTCTGCCTCTGCTTTC
48% GC, longest homopolymer 4 nt, total