RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AQR (Homo sapiens)

Ensembl gene IDs: ENSG00000021776

Ensembl transcript IDs: ENST00000156471.10, ENST00000543879.6, ENST00000558202.1, ENST00000559090.5, ENST00000560117.1

Found 613 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCTCTTCCGGGGCAGATGTGGCATCCTGAGGTGTGTTAGCTTCTaGCGGTGCAGATACAGCTCCTACCACAGTAGGGGTGGTCTCAGA +
Preference number: 1 (lower is better)
Translates to: GLFRGRCGILRCVSF*RCRYSSYHSRGGLR
Trigger: TCTGAGACCACCCCTACTGTGGTAGGAGCTGTATCTGCACCGGCAGAAGCTAACACACCTCAGGATGCCACATCTGCCCCGGAAGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CCA 90 bp GGAAGTGGCTCCTGTCTCACTGGGGGTGGTGTCAGTTTGAAAGGCTaGAGTTTCTTGACGGCAGCTGGTGTCTGTTGGACTGGGTATGAT +
Preference number: 1 (lower is better)
Translates to: GSGSCLTGGGVSLKG*SFLTAAGVCWTGYD
Trigger: ATCATACCCAGTCCAACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTTTCAAACTGACACCACCCCCAGTGAGACAGGAGCCACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CCA 90 bp CAACTGCCACTAGGTGTCCCCTTCTTGATCATTCTTCATGCTGCCTaGATTGGGGCATGGCTAAGCACTCAAGTCAAAGGATTAGTTGGC +
Preference number: 1 (lower is better)
Translates to: QLPLGVPFLIILHAA*IGAWLSTQVKGLVG
Trigger: GCCAACTAATCCTTTGACTTGAGTGCTTAGCCATGCCCCAATCCAGGCAGCATGAAGAATGATCAAGAAGGGGACACCTAGTGGCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CCA 90 bp GTCAGTTTGAAAGGCTGGAGTTTCTTGACGGCAGCTGGTGTCTGTTaGACTGGGTATGATGTCAGCTTGAACAGTCATGGCCTCTTCTTC +
Preference number: 1 (lower is better)
Translates to: VSLKGWSFLTAAGVC*TGYDVSLNSHGLFF
Trigger: GAAGAAGAGGCCATGACTGTTCAAGCTGACATCATACCCAGTCCAACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTTTCAAACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CCA 90 bp TCAGACTTTTTGACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTaGCTACTTGGTCTCTTCCGGGGCAGATGTGGCATCCTGAGGTGT +
Preference number: 1 (lower is better)
Translates to: SDFLTAMSSFRRTTV*LLGLFRGRCGILRC
Trigger: ACACCTCAGGATGCCACATCTGCCCCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGTCAAAAAGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 90 bp AGGCTGGAGTTTCTTGACGGCAGCTGGTGTCTGTTGGACTGGGTATaGTGTCAGCTTGAACAGTCATGGCCTCTTCTTCTGTTTCCAATT +
Preference number: 1 (lower is better)
Translates to: RLEFLDGSWCLLDWV*CQLEQSWPLLLFPI
Trigger: AATTGGAAACAGAAGAAGAGGCCATGACTGTTCAAGCTGACATCATACCCAGTCCAACAGACACCAGCTGCCGTCAAGAAACTCCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR GCA 90 bp AGGTCAACTGCCACTAGGTGTCCCCTTCTTGATCATTCTTCATGCTaGCTGGATTGGGGCATGGCTAAGCACTCAAGTCAAAGGATTAGT +
Preference number: 1 (lower is better)
Translates to: RSTATRCPLLDHSSC*LDWGMAKHSSQRIS
Trigger: ACTAATCCTTTGACTTGAGTGCTTAGCCATGCCCCAATCCAGGCAGCATGAAGAATGATCAAGAAGGGGACACCTAGTGGCAGTTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR GCA 90 bp CAAAGGTCAACTGCCACTAGGTGTCCCCTTCTTGATCATTCTTCATaGTGCCTGGATTGGGGCATGGCTAAGCACTCAAGTCAAAGGATT +
Preference number: 1 (lower is better)
Translates to: QRSTATRCPLLDHSS*CLDWGMAKHSSQRI
Trigger: AATCCTTTGACTTGAGTGCTTAGCCATGCCCCAATCCAGGCAGCATGAAGAATGATCAAGAAGGGGACACCTAGTGGCAGTTGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR GCA 90 bp CCTCTGTTCTGGGAAGTTGTGGTAGATGTTGGATATGATCTGAACTaGCACATCTGTTTTGCCTGTACCAGGTGGGCCCACAACCATAGT +
Preference number: 1 (lower is better)
Translates to: PLFWEVVVDVGYDLN*HICFACTRWAHNHS
Trigger: ACTATGGTTGTGGGCCCACCTGGTACAGGCAAAACAGATGTGGCAGTTCAGATCATATCCAACATCTACCACAACTTCCCAGAACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 90 bp CAATTAGAGTCCTCTGTTCTGGGAAGTTGTGGTAGATGTTGGATATaGTCTGAACTGCCACATCTGTTTTGCCTGTACCAGGTGGGCCCA +
Preference number: 1 (lower is better)
Translates to: QLESSVLGSCGRCWI*SELPHLFCLYQVGP
Trigger: TGGGCCCACCTGGTACAGGCAAAACAGATGTGGCAGTTCAGATCATATCCAACATCTACCACAACTTCCCAGAACAGAGGACTCTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 90 bp GAGCATCAAGGTCAACAGTCGGAACTCCAACGCGAACAAAGCGAGTaGAGAGAGACTGCTCCATGTTTGAGTACTTTTGAAAGGCCATGT +
Preference number: 1 (lower is better)
Translates to: EHQGQQSELQREQSE*RETAPCLSTFERPC
Trigger: ACATGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCTCTCTTCACTCGCTTTGTTCGCGTTGGAGTTCCGACTGTTGACCTTGATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR GCA 90 bp GAAAATTCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTaGCCAGACTCAGGATCCTGCTTCTTGCCCAGATTGATTTGGCAG +
Preference number: 1 (lower is better)
Translates to: ENSTLHTGVKFSDSH*PDSGSCFLPRLIWQ
Trigger: CTGCCAAATCAATCTGGGCAAGAAGCAGGATCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGAATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CCA 90 bp AGATGGTCTCTCTCCATTCTTTCTAGTAGTTGGGAAAGGTTCTGTTaGAATTATATGCAAATGAAGGGGGCGAGCTGTGAGCTGACTGAA +
Preference number: 1 (lower is better)
Translates to: RWSLSILSSSWERFC*NYMQMKGASCELTE
Trigger: TTCAGTCAGCTCACAGCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGAAAGAATGGAGAGAGACCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 90 bp TTCAACCTTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTaGAGGTACTACAAAAATGAGAGTTCTATTACGCTCTCTGAGGTC +
Preference number: 1 (lower is better)
Translates to: FNLSFPTSSNQGSED*RYYKNESSITLSEV
Trigger: GACCTCAGAGAGCGTAATAGAACTCTCATTTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAAGGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR GCA 90 bp TCATTCCTTCAAAATGTCAGGACCAGAAGGATTTCAATGGTAGTGTaGAGTTCTTGCTTGTTTCTTCAAAGATTCCTTGGACATGGCCAG +
Preference number: 1 (lower is better)
Translates to: SFLQNVRTRRISMVV*SSCLFLQRFLGHGQ
Trigger: CTGGCCATGTCCAAGGAATCTTTGAAGAAACAAGCAAGAACTGCACACTACCATTGAAATCCTTCTGGTCCTGACATTTTGAAGGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CCA 90 bp CTCAATAAATTACACTACGACATTTTGTACAAATCACTTCACTTCTaGTTTCCTCTTCGGCTGTTACTTCACCCTCTGGTTACCTGTAGG +
Preference number: 1 (lower is better)
Translates to: LNKLHYDILYKSLHF*FPLRLLLHPLVTCR
Trigger: CCTACAGGTAACCAGAGGGTGAAGTAACAGCCGAAGAGGAAACCAGAAGTGAAGTGATTTGTACAAAATGTCGTAGTGTAATTTATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR TCA 90 bp ATTCCCAAGATTCTACAGTCAACTGCCACTCACTTGCCTTTCCAATaGATAAACCGTTTAAAAGAATTCAAATCCCACCACCTTTACCCT +
Preference number: 1 (lower is better)
Translates to: IPKILQSTATHLPFQ*INRLKEFKSHHLYP
Trigger: AGGGTAAAGGTGGTGGGATTTGAATTCTTTTAAACGGTTTATTCATTGGAAAGGCAAGTGAGTGGCAGTTGACTGTAGAATCTTGGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR TCA 90 bp GGATTCTGTAGAAGAAGAGGGATAAAAGTTTCTATCTCCAGAATCTaGGCAGCCTCTTCCATCAAAATGTTGTCATACTTGAAACCTAGC +
Preference number: 1 (lower is better)
Translates to: GFCRRRGIKVSISRI*AASSIKMLSYLKPS
Trigger: GCTAGGTTTCAAGTATGACAACATTTTGATGGAAGAGGCTGCTCAGATTCTGGAGATAGAAACTTTTATCCCTCTTCTTCTACAGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 90 bp ATCACTTTCATTTCCCCTCATCACCTGACATTGACACAAATGTCCTaGTGCAGTAGGATACATCATAAAATGAGAGTCTGTACCATATTC +
Preference number: 1 (lower is better)
Translates to: ITFISPHHLTLTQMS*CSRIHHKMRVCTIF
Trigger: GAATATGGTACAGACTCTCATTTTATGATGTATCCTACTGCATCAGGACATTTGTGTCAATGTCAGGTGATGAGGGGAAATGAAAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR GCA 90 bp CAAGATAAAAAGGAAATAGCAATTCAAGGCACAAAGCTAAGCACATaGAACAATATAGATGATTTGGGGGTGGGACAGTACAGAATTCAG +
Preference number: 1 (lower is better)
Translates to: QDKKEIAIQGTKLST*NNIDDLGVGQYRIQ
Trigger: CTGAATTCTGTACTGTCCCACCCCCAAATCATCTATATTGTTGCATGTGCTTAGCTTTGTGCCTTGAATTGCTATTTCCTTTTTATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 90 bp TCCTGTCTCACTGGGGGTGGTGTCAGTTTGAAAGGCTGGAGTTTCTaGACGGCAGCTGGTGTCTGTTGGACTGGGTATGATGTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: SCLTGGGVSLKGWSF*TAAGVCWTGYDVSL
Trigger: CAAGCTGACATCATACCCAGTCCAACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTTTCAAACTGACACCACCCCCAGTGAGACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCTTCTGGAGTGGAAGTaGCTCCTGTCTCACTGGGGG +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRLLEWK*LLSHWG
Trigger: CCCCCAGTGAGACAGGAGCCACTTCCACTCCAGAAG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGATAGTCAGCCCAGGCTaGATTCCAGCACGGATGGCT +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRIVSPG*IPARMA
Trigger: AGCCATCCGTGCTGGAATGCAGCCTGGGCTGACTAT...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCATTCTTCATGCTGCCTaGATTGGGGCATGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSILHAA*IGAWLS
Trigger: GCTTAGCCATGCCCCAATCCAGGCAGCATGAAGAAT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR GCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCCCAGACTCAGGATCCTaGTTCTTGCCCAGATTGATT +
Preference number: 2 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSPDSGS*FLPRLI
Trigger: AATCAATCTGGGCAAGAAGCAGGATCCTGAGTCTGG...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 90 bp CTCTCATTGCCCAGACTCAGGATCCTGCTTCTTGCCCAGATTGATTaGGCAGAGTCCTCCTATTTAGCTGATGACAAATCCTGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LSLPRLRILLLAQID*AESSYLADDKSWLS
Trigger: GCTGAGCCAGGATTTGTCATCAGCTAAATAGGAGGACTCTGCCAAATCAATCTGGGCAAGAAGCAGGATCCTGAGTCTGGGCAATGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGAGTTTCACAGGTATATaGGGCATCTCCTGGAACCCC +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRSFTGI*GISWNP
Trigger: GGGGTTCCAGGAGATGCCTCATATACCTGTGAAACT...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTGCTCTGGCTCTCCCTTaGGCATCAAGGTCAACAGTC +
Preference number: 2 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVALALP*ASRSTV
Trigger: GACTGTTGACCTTGATGCTCAAGGGAGAGCCAGAGC...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCCCTCAGATGGCCCACTaGCCTGGTTCGTACCAGAGA +
Preference number: 2 (lower is better)
Translates to: SSSWERFCWNYMQMKGASPQMAH*PGSYQR
Trigger: TCTCTGGTACGAACCAGGGCAGTGGGCCATCTGAGG...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCTGAAGGTCTCCTTGTaGCTGGTTATCCCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHLKVSL*LVIPRK
Trigger: TTTTCTTGGGATAACCAGCCACAAGGAGACCTTCAG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCATGCAACAATATAGATaGTTTGGGGGTGGGACAGTA +
Preference number: 2 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSMQQYR*FGGGTV
Trigger: TACTGTCCCACCCCCAAATCATCTATATTGTTGCAT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTTTTGCCTGTACCAGGTaGGCCCACAACCATAGTCAG +
Preference number: 2 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVFACTR*AHNHSQ
Trigger: CTGACTATGGTTGTGGGCCCACCTGGTACAGGCAAA...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGGGCAAGAGCTGCACATaGGGTAAGTTTCCTAGATTC +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRGKSCT*GKFPRF
Trigger: GAATCTAGGAAACTTACCCCATGTGCAGCTCTTGCC...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAGCAGGGATGGCTTCTaGAGTGGAAGTGGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSRDGF*SGSGSC
Trigger: ACAGGAGCCACTTCCACTCCAGAAGCCATCCCTGCT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 90 bp TCATACTTGAGTAGCAAGGTCCCAGGTACCTCTGCCTTCCCATATTaGAACCACATTTTACCTGAAGGTCTCCTTGTGGCTGGTTATCCC +
Preference number: 2 (lower is better)
Translates to: SYLSSKVPGTSAFPY*NHILPEGLLVAGYP
Trigger: GGGATAACCAGCCACAAGGAGACCTTCAGGTAAAATGTGGTTCAAATATGGGAAGGCAGAGGTACCTGGGACCTTGCTACTCAAGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 90 bp GCGAGCTGTGAGCTGACTGAAAGCTGGAGTCAGTTCAAAACAGTTTaGGAAGAGGGATACTCTGGCGAAGATATAAAGTCCAAGTCTGGC +
Preference number: 2 (lower is better)
Translates to: ASCELTESWSQFKTV*EEGYSGEDIKSKSG
Trigger: GCCAGACTTGGACTTTATATCTTCGCCAGAGTATCCCTCTTCCAAAACTGTTTTGAACTGACTCCAGCTTTCAGTCAGCTCACAGCTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTTTACTCAGACTTTTTaGCTGCCATGTCCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSFTQTF*LPCPPL
Trigger: TAAAGGAGGACATGGCAGTCAAAAAGTCTGAGTAAA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGGGTAGATGTTGGATATaGTCTGAACTGCCACATCTG +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRGRCWI*SELPHL
Trigger: CAGATGTGGCAGTTCAGATCATATCCAACATCTACC...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 90 bp AATGTCAGGACCAGAAGGATTTCAATGGTAGTGTGCAGTTCTTGCTaGTTTCTTCAAAGATTCCTTGGACATGGCCAGGCCCATAGGTGG +
Preference number: 2 (lower is better)
Translates to: NVRTRRISMVVCSSC*FLQRFLGHGQAHRW
Trigger: CCACCTATGGGCCTGGCCATGTCCAAGGAATCTTTGAAGAAACAAGCAAGAACTGCACACTACCATTGAAATCCTTCTGGTCCTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACCTAACCAGCCTTGGCTaGTGCCACTCTGCCAGCAAC +
Preference number: 2 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNLTSLG*CHSASN
Trigger: GTTGCTGGCAGAGTGGCATCAGCCAAGGCTGGTTAG...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGAACCACATTTTACCTaGAGGTCTCCTTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLEPHFT*RSPCGW
Trigger: CCAGCCACAAGGAGACCTTCAGGTAAAATGTGGTTC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTTAAATCCTTGTAACTaGAGAGTATCGGTGGATGAA +
Preference number: 2 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSLNPCN*RVSVDE
Trigger: TTCATCCACCGATACTCTTCAGTTACAAGGATTTAA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCTGTCTCTTTTACCTTaGTCTGGCTCTCCCTTGAGC +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLSLLP*SGSPLS
Trigger: GCTCAAGGGAGAGCCAGAGCAAGGTAAAAGAGACAG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCGGGCATGGCTCTTTTTaGTTTTCTTTACAAAGAGAT +
Preference number: 2 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSGHGSF*FSLQRD
Trigger: ATCTCTTTGTAAAGAAAACCAAAAAGAGCCATGCCC...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGGGGTGGCAATCTGATTaGGCATTTTCGAATAATGTG +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRGWQSD*AFSNNV
Trigger: CACATTATTCGAAAATGCCCAATCAGATTGCCACCC...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTGCTGTACTAAACTCTaGCAAGAGCTGCACATGGGG +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLCCTKL*QELHMG
Trigger: CCCCATGTGCAGCTCTTGCCAGAGTTTAGTACAGCA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGGTTACTTTAACATTATaGCCAGGGAAGCTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRVTLTL*PGKLAF
Trigger: AAAAGCCAGCTTCCCTGGTCATAATGTTAAAGTAAC...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAAGCTCTTCTTCTCCATaGCCAAGACGCAGTAGGTGG +
Preference number: 2 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKSSSSP*PRRSRW
Trigger: CCACCTACTGCGTCTTGGTCATGGAGAAGAAGAGCT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTCTCTTCCATACCTGCTaGAATCTTTCTCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVLFHTC*NLSLSP
Trigger: TGGAGACAGAGAAAGATTTCAGCAGGTATGGAAGAG...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAGAAGGACTACAGTTTaGCTACTTGGTCTCTTCCGG +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLRRTTV*LLGLFR
Trigger: CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCCTTTAAAAATGGGTTaGGGAGCATTTGCAAAGTAT +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRPLKMG*GAFAKY
Trigger: ATACTTTGCAAATGCTCCTCAACCCATTTTTAAAGG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCTCTATCTCCAGAATCTaGGCAGCCTCTTCCATCAAA +
Preference number: 2 (lower is better)
Translates to: SSSWERFCWNYMQMKGASSISRI*AASSIK
Trigger: TTTGATGGAAGAGGCTGCTCAGATTCTGGAGATAGA...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCCGGCTAAATCCATCCTaGGGATTCTGTAGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: SSSWERFCWNYMQMKGASRLNPS*GFCRRR
Trigger: TCTTCTTCTACAGAATCCTCAGGATGGATTTAGCCG...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTAGACTGCTCCATGTTTaGGTACTTTTGAAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVRLLHV*VLLKGH
Trigger: ATGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTCAAGGGTCAGAAGACTaGAGGTACTACAAAAATGAG +
Preference number: 2 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVQGSED*RYYKNE
Trigger: CTCATTTTTGTAGTACCTTCAGTCTTCTGACCCTTG...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGTGCTACTACATATTCTaGCTCTCCAAGATTCTGATA +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRCYYIF*LSKILI
Trigger: TATCAGAATCTTGGAGAGGCAGAATATGTAGTAGCA...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACCTAGAGGAGACATTCTaGGGTAAATGCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNLEETF*GKCSPP
Trigger: GGGAGGGGAGCATTTACCCCAGAATGTCTCCTCTAG...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCTAGTATCGCGTCCTTaGTATTTCACTCCTCTCATC +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLVSRP*YFTPLI
Trigger: GATGAGAGGAGTGAAATACCAAGGACGCGATACTAG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGTTTGCAAAGTATTCATaGAAAGGGAAGAAAGTGGAG +
Preference number: 2 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRFAKYS*KGKKVE
Trigger: CTCCACTTTCTTCCCTTTCCATGAATACTTTGCAAA...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTaGGTATTTCACTCCTCTCATCGTCTCATCACTTTCATTTCCCCT +
Preference number: 2 (lower is better)
Translates to: LTLITNRPGFPSIAS*VFHSSHRLITFISP
Trigger: AGGGGAAATGAAAGTGATGAGACGATGAGAGGAGTGAAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACGCTTCTTGCCCAGATTaGTTTGGCAGAGTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNASCPD*FGRVLL
Trigger: TAGGAGGACTCTGCCAAATCAATCTGGGCAAGAAGC...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCTGCCTTCCCATATTTaGACCACATTTTACCTGAAG +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLPSHI*TTFYLK
Trigger: CTTCAGGTAAAATGTGGTTCAAATATGGGAAGGCAG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTCATCTAGGCAAGAGTaGTGTACATTGCTTGGACAA +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSSRQE*CTLLGQ
Trigger: TTGTCCAAGCAATGTACATCACTCTTGCCTAGATGA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR GCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTCATTTTCGAATAATGTaGACTACTTGGGTCCCCATA +
Preference number: 2 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVHFRIM*TTWVPI
Trigger: TATGGGGACCCAAGTAGTGCACATTATTCGAAAATG...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTACCCCTAGACTCTTTTaGAATCGTTTGACTTCTTCT +
Preference number: 2 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVTPRLF*NRLTSS
Trigger: AGAAGAAGTCAAACGATTGCAAAAGAGTCTAGGGGT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGCTGATGACAAATCCTaGCTCAGCCTAACCAGCCTT +
Preference number: 2 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCADDKS*LSLTSL
Trigger: AAGGCTGGTTAGGCTGAGCCAGGATTTGTCATCAGC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAGCATTCCAGCACGGATaGCTTCTATCTGTGTATGAG +
Preference number: 2 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKAFQHG*LLSVYE
Trigger: CTCATACACAGATAGAAGCCATCCGTGCTGGAATGC...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 90 bp ACAAACTTCAATACGATGTTGATGCTGTTGGTTCACAAATCATACTaGAGTAGCAAGGTCCCAGGTACCTCTGCCTTCCCATATTTGAAC +
Preference number: 2 (lower is better)
Translates to: TNFNTMLMLLVHKSY*SSKVPGTSAFPYLN
Trigger: GTTCAAATATGGGAAGGCAGAGGTACCTGGGACCTTGCTACTCAAGTATGATTTGTGAACCAACAGCATCAACATCGTATTGAAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 90 bp CACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTaGACCTTGAAATCTATCAACAGTTGTCACCTTGTTTGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: HCPGSYQRKKNIVIL*TLKSINSCHLVWSS
Trigger: GGAAGACCAAACAAGGTGACAACTGTTGATAGATTTCAAGGTCAACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTTGACACAAATGTCCTaGTGCAGTAGGATACATCAT +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLTQMS*CSRIHH
Trigger: ATGATGTATCCTACTGCATCAGGACATTTGTGTCAA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTATTTTTCACTTTGCTaGTATACTCTTCCCAGCGAG +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLYFSLC*YTLPSE
Trigger: CTCGCTGGGAAGAGTATATCAGCAAAGTGAAAAATA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAAACTCTGGCAAGAGCTaGACATGGGGTAAGTTTCCT +
Preference number: 2 (lower is better)
Translates to: VSTSSIDDVANKMLLAIINSGKS*TWGKFP
Trigger: AGGAAACTTACCCCATGTGCAGCTCTTGCCAGAGTT...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTCATGCTCATTCTTTTaGGCATGGCTCTTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSCSFF*AWLFLV
Trigger: AACCAAAAAGAGCCATGCCCAAAAGAATGAGCATGA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCCAAGACGCAGTAGGTaGCGCTCATCAATGTCTAAT +
Preference number: 2 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNPRRSR*RSSMSN
Trigger: ATTAGACATTGATGAGCGCCACCTACTGCGTCTTGG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATACTACAAAGTGCCTGTaGATCACCTGGGGACTTTGT +
Preference number: 2 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNTTKCL*ITWGLC
Trigger: ACAAAGTCCCCAGGTGATTCACAGGCACTTTGTAGT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCATGAAAATAATTCTATaGGTGCGATTCCCCATACAG +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLMKIIL*VRFPIQ
Trigger: CTGTATGGGGAATCGCACTCATAGAATTATTTTCAT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGATTCTCCCACTCCTTaGAAATCTTCAACATTAATG +
Preference number: 2 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLDSPTP*KSSTLM
Trigger: CATTAATGTTGAAGATTTTCAAGGAGTGGGAGAATC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCCTAAAATGATATCGTaGAGCCAGTCAGGTACCACA +
Preference number: 2 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNPKMIS*SQSGTT
Trigger: TGTGGTACCTGACTGGCTGCACGATATCATTTTAGG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAGGATATGATCTGAACTaGCACATCTGTTTTGCCTGT +
Preference number: 2 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKGYDLN*HICFAC
Trigger: ACAGGCAAAACAGATGTGGCAGTTCAGATCATATCC...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTAGTTCCTTCCCAATTTaGACACTCAAGGGTATTCGT +
Preference number: 2 (lower is better)
Translates to: LTLITNRPGFPSIASLVFSSFPI*TLKGIR
Trigger: ACGAATACCCTTGAGTGTCCAAATTGGGAAGGAACT...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAAGTTCCTTCCCAATTTaGACACTCAAGGGTATTCGT +
Preference number: 2 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKSSFPI*TLKGIR
Trigger: ACGAATACCCTTGAGTGTCCAAATTGGGAAGGAACT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 90 bp GAGACTTCCGTAACATCTGGCAATGTACTACCTTTATTTTTCACTTaGCTGATATACTCTTCCCAGCGAGACATTACCTGGTATAAGAAG +
Preference number: 2 (lower is better)
Translates to: ETSVTSGNVLPLFFT*LIYSSQRDITWYKK
Trigger: CTTCTTATACCAGGTAATGTCTCGCTGGGAAGAGTATATCAGCAAAGTGAAAAATAAAGGTAGTACATTGCCAGATGTTACGGAAGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAATGTTGGATATGATCTaGACTGCCACATCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKMLDMI*TATSVL
Trigger: CAAAACAGATGTGGCAGTTCAGATCATATCCAACAT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTCGTTTTAAGGCAGCATaGGTACAGGTCATAGCAATA +
Preference number: 2 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSRFKAA*VQVIAI
Trigger: TATTGCTATGACCTGTACTCATGCTGCCTTAAAACG...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTGGCCTGCATCCTTTATaGAGTAAGAATTGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSGLHPL*SKNWCV
Trigger: AACACACCAATTCTTACTTCATAAAGGATGCAGGCC...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTATTCAGTCTGAGGTGTaGCTCAAGAATAAACAGACA +
Preference number: 2 (lower is better)
Translates to: LTLITNRPGFPSIASLVFIQSEV*LKNKQT
Trigger: TGTCTGTTTATTCTTGAGGCACACCTCAGACTGAAT...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR GCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTCGAGTGAAGAGAGACTaGTCCATGTTTGAGTACTTT +
Preference number: 2 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSRVKRD*SMFEYF
Trigger: AAAGTACTCAAACATGGAGCAGTCTCTCTTCACTCG...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTTCCATTCACATCTCTTaGAGAAGTCGACAAAAGTGC +
Preference number: 2 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSSIHIS*RSRQKC
Trigger: GCACTTTTGTCGACTTCTGCAAGAGATGTGAATGGA...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCATGTCGCGAATAAGATaGTTTTGGCCATTATATGTT +
Preference number: 2 (lower is better)
Translates to: SSSWERFCWNYMQMKGASMSRIR*FWPLYV
Trigger: AACATATAATGGCCAAAAGCATCTTATTCGCGACAT...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATATATGACCAGGGAAGCTaGCTTTTAAATGCTCAATGG +
Preference number: 2 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIYDQGS*LLNAQW
Trigger: CCATTGAGCATTTAAAAGCCAGCTTCCCTGGTCATA...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCTTTTCCACTTCTTACTaGAAAAGTTATCCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: SSSWERFCWNYMQMKGASFSTSY*KSYPER
Trigger: CCTTTCAGGATAACTTTTCCAGTAAGAAGTGGAAAA...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATTTTACTCAGACTTTTTaGCTGCCATGTCCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNFTQTF*LPCPPL
Trigger: TAAAGGAGGACATGGCAGTCAAAAAGTCTGAGTAAA...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAAGAGAAATGTATCATTaGAATCAAGGGTGGCAATCT +
Preference number: 2 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKREMYH*NQGWQS
Trigger: AGATTGCCACCCTTGATTTCAATGATACATTTCTCT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 90 bp ACCTTGTTTGGTCTTCCAATCAATGGATTGTTTCCACATCGTCTATaGATGATGTCGCGAATAAGATGCTTTTGGCCATTATATGTTGTT +
Preference number: 2 (lower is better)
Translates to: TLFGLPINGLFPHRL*MMSRIRCFWPLYVV
Trigger: AACAACATATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAACAATCCATTGATTGGAAGACCAAACAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 90 bp AATCTATCAACAGTTGTCACCTTGTTTGGTCTTCCAATCAATGGATaGTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTT +
Preference number: 2 (lower is better)
Translates to: NLSTVVTLFGLPING*FPHRLLMMSRIRCF
Trigger: AAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAACAATCCATTGATTGGAAGACCAAACAAGGTGACAACTGTTGATAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGATGTTATGATGTACTaGTTCAGAGGTCCCAAATCA +
Preference number: 2 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNDVMMY*FRGPKS
Trigger: TGATTTGGGACCTCTGAATCAGTACATCATAACATC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR TCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCTATCTGTGTATGAGTaGACTGAATCGTATTACGTT +
Preference number: 2 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNLSVYE*TESYYV
Trigger: AACGTAATACGATTCAGTTCACTCATACACAGATAG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR TCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATATTCTATTACGCTCTCTaGGGTCAATGCTATCTTTAT +
Preference number: 2 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIFYYAL*GQCYLY
Trigger: ATAAAGATAGCATTGACCTCAGAGAGCGTAATAGAA...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCACTCAAGGGTATTCGTaGTTAAGTCCAGTATATTCT +
Preference number: 2 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCTQGYS*LSPVYS
Trigger: AGAATATACTGGACTTAACCACGAATACCCTTGAGT...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAGACTTCCGTAACATCTaGCAATGTACTACCTTTATT +
Preference number: 2 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIDFRNI*QCTTFI
Trigger: AATAAAGGTAGTACATTGCCAGATGTTACGGAAGTC...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR GCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACGTAATCTTAGTACAGTaGTTCTCAAACTACAAAGTG +
Preference number: 2 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNVILVQ*FSNYKV
Trigger: CACTTTGTAGTTTGAGAAGCACTGTACTAAGATTAC...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR GCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATAAGCTGGCTTTTAAATaGTCAATGGAGAGAAATGTA +
Preference number: 2 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNKLAFK*SMERNV
Trigger: TACATTTCTCTCCATTGAGCATTTAAAAGCCAGCTT...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 90 bp ATCACCTGGGGACTTTGTTGCAATGTAGATTTAGATTTAATAGGTTaGGAGCAGAGCCCAAACTTCTGCATTTCTATAAATAACAAACTT +
Preference number: 2 (lower is better)
Translates to: ITWGLCCNVDLDLIG*EQSPNFCISINNKL
Trigger: AAGTTTGTTATTTATAGAAATGCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACAAAGTCCCCAGGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 90 bp TTTCAAAATCTTTTATCGGAGAAATTACATAACAGGCTATCTGGCTaGATCCTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATC +
Preference number: 2 (lower is better)
Translates to: FQNLLSEKLHNRLSG*ILTLITNRPGFPSI
Trigger: GATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAGGATCAAGCCAGATAGCCTGTTATGTAATTTCTCCGATAAAAGATTTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR GCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATACCTGGGGACTTTGTTaGAATGTAGATTTAGATTTA +
Preference number: 2 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNTWGLC*NVDLDL
Trigger: TAAATCTAAATCTACATTGCAACAAAGTCCCCAGGT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR GCA 72 bp CGGGGCAGATGTGGCATCCTGAGGTGTGTTAGCTTCTaGCGGTGCAGATACAGCTCCTACCACAGTAGGGGT +
Preference number: 3 (lower is better)
Translates to: RGRCGILRCVSF*RCRYSSYHSRG
Trigger: ACCCCTACTGTGGTAGGAGCTGTATCTGCACCGGCAGAAGCTAACACACCTCAGGATGCCACATCTGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CCA 72 bp GGGTGGTCTCAGATAAAGCAGGGATGGCTTCTGGAGTaGAAGTGGCTCCTGTCTCACTGGGGGTGGTGTCAG +
Preference number: 3 (lower is better)
Translates to: GWSQIKQGWLLE*KWLLSHWGWCQ
Trigger: CTGACACCACCCCCAGTGAGACAGGAGCCACTTCCACTCCAGAAGCCATCCCTGCTTTATCTGAGACCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp GGCTACTTGGTCTCTTCCGGGGCAGATGTGGCATCCTaGGGTGTGTTAGCTTCTGCCGGTGCAGATACAGCT +
Preference number: 3 (lower is better)
Translates to: GYLVSSGADVAS*GVLASAGADTA
Trigger: AGCTGTATCTGCACCGGCAGAAGCTAACACACCTCAGGATGCCACATCTGCCCCGGAAGAGACCAAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR GCA 72 bp AGATGTGGCATCCTGAGGTGTGTTAGCTTCTGCCGGTaGAGATACAGCTCCTACCACAGTAGGGGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: RCGILRCVSFCR*RYSSYHSRGGL
Trigger: GAGACCACCCCTACTGTGGTAGGAGCTGTATCTGCACCGGCAGAAGCTAACACACCTCAGGATGCCACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CCA 72 bp TCCTGTCTCACTGGGGGTGGTGTCAGTTTGAAAGGCTaGAGTTTCTTGACGGCAGCTGGTGTCTGTTGGACT +
Preference number: 3 (lower is better)
Translates to: SCLTGGGVSLKG*SFLTAAGVCWT
Trigger: AGTCCAACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTTTCAAACTGACACCACCCCCAGTGAGACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp TGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTaGGTCAAGCTCCAGGAAACTGAGCTAGGGTTTGTC +
Preference number: 3 (lower is better)
Translates to: WHTVSPEYHAAF*VKLQETELGFV
Trigger: GACAAACCCTAGCTCAGTTTCCTGGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR GCA 72 bp CACTACCAAGCGACGGACATCCCTCAGATGGCCCACTaGCCTGGTTCGTACCAGAGAAAGAAGAATATAGTC +
Preference number: 3 (lower is better)
Translates to: HYQATDIPQMAH*PGSYQRKKNIV
Trigger: GACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATCTGAGGGATGTCCGTCGCTTGGTAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTACCTGAAGGTCTCCTaGTGGCTGGTTATCCCAAGA +
Preference number: 3 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSYLKVS*WLVIPR
Trigger: TCTTGGGATAACCAGCCACAAGGAGACCTTCAGGTA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTACTGCCACATCTGTTTaGCCTGTACCAGGTGGGCCC +
Preference number: 3 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVTATSV*PVPGGP
Trigger: GGGCCCACCTGGTACAGGCAAAACAGATGTGGCAGT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGTGCTCTGGCTCTCCCTaGAGCATCAAGGTCAACAGT +
Preference number: 3 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRCSGSP*SIKVNS
Trigger: ACTGTTGACCTTGATGCTCAAGGGAGAGCCAGAGCA...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCCTGTCTCTTTTACCTaGCTCTGGCTCTCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRPVSFT*LWLSLE
Trigger: CTCAAGGGAGAGCCAGAGCAAGGTAAAAGAGACAGG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR GCA 72 bp ACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTaGCCAGACTCAGGATCCTGCTTCTTGCCCAGATTG +
Preference number: 3 (lower is better)
Translates to: TLHTGVKFSDSH*PDSGSCFLPRL
Trigger: CAATCTGGGCAAGAAGCAGGATCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR GCA 72 bp GCCACTAGGTGTCCCCTTCTTGATCATTCTTCATGCTaGCTGGATTGGGGCATGGCTAAGCACTCAAGTCAA +
Preference number: 3 (lower is better)
Translates to: ATRCPLLDHSSC*LDWGMAKHSSQ
Trigger: TTGACTTGAGTGCTTAGCCATGCCCCAATCCAGGCAGCATGAAGAATGATCAAGAAGGGGACACCTAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CCA 72 bp CCAAGCGACGGACATCCCTCAGATGGCCCACTGCCCTaGTTCGTACCAGAGAAAGAAGAATATAGTCATTCT +
Preference number: 3 (lower is better)
Translates to: PSDGHPSDGPLP*FVPEKEEYSHS
Trigger: AGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATCTGAGGGATGTCCGTCGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CCA 72 bp TTGACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTaGCTACTTGGTCTCTTCCGGGGCAGATGTGGCATC +
Preference number: 3 (lower is better)
Translates to: LTAMSSFRRTTV*LLGLFRGRCGI
Trigger: GATGCCACATCTGCCCCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp GTAGCAAGGTCCCAGGTACCTCTGCCTTCCCATATTTaGACCACATTTTACCTGAAGGTCTCCTTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: VARSQVPLPSHI*TTFYLKVSLWL
Trigger: CAGCCACAAGGAGACCTTCAGGTAAAATGTGGTTCAAATATGGGAAGGCAGAGGTACCTGGGACCTTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR TCA 72 bp TTTCTTGACGGCAGCTGGTGTCTGTTGGACTGGGTATaGTGTCAGCTTGAACAGTCATGGCCTCTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: FLDGSWCLLDWV*CQLEQSWPLLL
Trigger: CAGAAGAAGAGGCCATGACTGTTCAAGCTGACATCATACCCAGTCCAACAGACACCAGCTGCCGTCAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR GCA 72 bp AAGTTCTCTGACTCTCATTGCCCAGACTCAGGATCCTaGTTCTTGCCCAGATTGATTTGGCAGAGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: KFSDSHCPDSGS*FLPRLIWQSPP
Trigger: AGGAGGACTCTGCCAAATCAATCTGGGCAAGAAGCAGGATCCTGAGTCTGGGCAATGAGAGTCAGAGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR GCA 72 bp TGGGAAGTTGTGGTAGATGTTGGATATGATCTGAACTaGCACATCTGTTTTGCCTGTACCAGGTGGGCCCAC +
Preference number: 3 (lower is better)
Translates to: WEVVVDVGYDLN*HICFACTRWAH
Trigger: GTGGGCCCACCTGGTACAGGCAAAACAGATGTGGCAGTTCAGATCATATCCAACATCTACCACAACTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCCTTTACTCAGACTTTTaGACTGCCATGTCCTCCTTT +
Preference number: 3 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSLYSDF*TAMSSF
Trigger: AAAGGAGGACATGGCAGTCAAAAAGTCTGAGTAAAG...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAAAGTTCCTTCCCAATTaGGACACTCAAGGGTATTCG +
Preference number: 3 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGKFLPN*DTQGYS
Trigger: CGAATACCCTTGAGTGTCCAAATTGGGAAGGAACTT...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGGAGACTGCTCCATGTTaGAGTACTTTTGAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRETAPC*STFERP
Trigger: TGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCTC...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCTTTACTCAGACTTTTaGACTGCCATGTCCTCCTTT +
Preference number: 3 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRLYSDF*TAMSSF
Trigger: AAAGGAGGACATGGCAGTCAAAAAGTCTGAGTAAAG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTGCTTCTTGCCCAGATaGATTTGGCAGAGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLCFLPR*IWQSPP
Trigger: AGGAGGACTCTGCCAAATCAATCTGGGCAAGAAGCA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCAGTTGTCACCTTGTTaGGTCTTCCAATCAATGGAT +
Preference number: 3 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRQLSPC*VFQSMD
Trigger: ATCCATTGATTGGAAGACCAAACAAGGTGACAACTG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp GACGCAGTAGGTGGCGCTCATCAATGTCTAATGCCATaGTTTTCTCAAACAACTGGTTTAGGGCCTGATTGG +
Preference number: 3 (lower is better)
Translates to: DAVGGAHQCLMP*FSQTTGLGPDW
Trigger: CCAATCAGGCCCTAAACCAGTTGTTTGAGAAAATCATGGCATTAGACATTGATGAGCGCCACCTACTGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp GGTCAACAGTCGGAACTCCAACGCGAACAAAGCGAGTaGAGAGAGACTGCTCCATGTTTGAGTACTTTTGAA +
Preference number: 3 (lower is better)
Translates to: GQQSELQREQSE*RETAPCLSTFE
Trigger: TTCAAAAGTACTCAAACATGGAGCAGTCTCTCTTCACTCGCTTTGTTCGCGTTGGAGTTCCGACTGTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp CAGCTGGTGTCTGTTGGACTGGGTATGATGTCAGCTTaGACAGTCATGGCCTCTTCTTCTGTTTCCAATTCT +
Preference number: 3 (lower is better)
Translates to: QLVSVGLGMMSA*TVMASSSVSNS
Trigger: AGAATTGGAAACAGAAGAAGAGGCCATGACTGTTCAAGCTGACATCATACCCAGTCCAACAGACACCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCGTATTACGTTTGGGTaGATTATAAGGATAAGGACC +
Preference number: 3 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRRITFG*IIRIRT
Trigger: GGTCCTTATCCTTATAATCAACCCAAACGTAATACG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTGTCCATTCACATCTCTaGCAGAAGTCGACAAAAGTG +
Preference number: 3 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVVHSHL*QKSTKV
Trigger: CACTTTTGTCGACTTCTGCAAGAGATGTGAATGGAC...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCTTCCAATCAATGGATaGTTTCCACATCGTCTATTG +
Preference number: 3 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRLPING*FPHRLL
Trigger: CAATAGACGATGTGGAAACAATCCATTGATTGGAAG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp TCCTCTGTTCTGGGAAGTTGTGGTAGATGTTGGATATaGTCTGAACTGCCACATCTGTTTTGCCTGTACCAG +
Preference number: 3 (lower is better)
Translates to: SSVLGSCGRCWI*SELPHLFCLYQ
Trigger: CTGGTACAGGCAAAACAGATGTGGCAGTTCAGATCATATCCAACATCTACCACAACTTCCCAGAACAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR GCA 72 bp AAGCCAGCATTTGCTGTACTAAACTCTGGCAAGAGCTaGACATGGGGTAAGTTTCCTAGATTCTTGTATCGC +
Preference number: 3 (lower is better)
Translates to: KPAFAVLNSGKS*TWGKFPRFLYR
Trigger: GCGATACAAGAATCTAGGAAACTTACCCCATGTGCAGCTCTTGCCAGAGTTTAGTACAGCAAATGCTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CCA 72 bp GCATTTGCTGTACTAAACTCTGGCAAGAGCTGCACATaGGGTAAGTTTCCTAGATTCTTGTATCGCCAGTTG +
Preference number: 3 (lower is better)
Translates to: AFAVLNSGKSCT*GKFPRFLYRQL
Trigger: CAACTGGCGATACAAGAATCTAGGAAACTTACCCCATGTGCAGCTCTTGCCAGAGTTTAGTACAGCAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGTAAGCAGAGGTCCCTaGTCAGAAAACATTAGTCAC +
Preference number: 3 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLVSRGP*SENISH
Trigger: GTGACTAATGTTTTCTGACAAGGGACCTCTGCTTAC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTTGGGTTGAGGAGCATTaGCAAAGTATTCATGGAAAG +
Preference number: 3 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVWVEEH*QSIHGK
Trigger: CTTTCCATGAATACTTTGCAAATGCTCCTCAACCCA...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp AATAATGTGCACTACTTGGGTCCCCATAACCTAAAATaGTATCGTGCAGCCAGTCAGGTACCACACAATCAG +
Preference number: 3 (lower is better)
Translates to: NNVHYLGPHNLK*YRAASQVPHNQ
Trigger: CTGATTGTGTGGTACCTGACTGGCTGCACGATATCATTTTAGGTTATGGGGACCCAAGTAGTGCACATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp TTGGGGGTAACTATGAGATGGGGCCTGCATCCTTTATaGAGTAAGAATTGGTGTGTTCTCCTCTTGTTCACT +
Preference number: 3 (lower is better)
Translates to: LGVTMRWGLHPL*SKNWCVLLLFT
Trigger: AGTGAACAAGAGGAGAACACACCAATTCTTACTTCATAAAGGATGCAGGCCCCATCTCATAGTTACCCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGCCAGCTTATTTTGGTaGCAGGTATCATACCTCATA +
Preference number: 3 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLASLFW*QVSYLI
Trigger: TATGAGGTATGATACCTGCAACCAAAATAAGCTGGC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTTCGACAAAAGTGCTTTaGGATTTATGGATAGCCAAG +
Preference number: 3 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVSTKVL*DLWIAK
Trigger: CTTGGCTATCCATAAATCCAAAAGCACTTTTGTCGA...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp TACCTCTGCCTTCCCATATTTGAACCACATTTTACCTaGAGGTCTCCTTGTGGCTGGTTATCCCAAGAAAAA +
Preference number: 3 (lower is better)
Translates to: YLCLPIFEPHFT*RSPCGWLSQEK
Trigger: TTTTTCTTGGGATAACCAGCCACAAGGAGACCTTCAGGTAAAATGTGGTTCAAATATGGGAAGGCAGAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR TCA 72 bp CGAGTGAAGAGAGACTGCTCCATGTTTGAGTACTTTTaGAAGGCCATGTTCTTAATAACTGGAGGTAACTGG +
Preference number: 3 (lower is better)
Translates to: RVKRDCSMFEYF*KAMFLITGGNW
Trigger: CCAGTTACCTCCAGTTATTAAGAACATGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCTCTCTTCACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp GCGAACAAAGCGAGTGAAGAGAGACTGCTCCATGTTTaGGTACTTTTGAAAGGCCATGTTCTTAATAACTGG +
Preference number: 3 (lower is better)
Translates to: ANKASEERLLHV*VLLKGHVLNNW
Trigger: CCAGTTATTAAGAACATGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCTCTCTTCACTCGCTTTGTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAAAGTTCCTTCCCAATTaGGACACTCAAGGGTATTCG +
Preference number: 3 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKKFLPN*DTQGYS
Trigger: CGAATACCCTTGAGTGTCCAAATTGGGAAGGAACTT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTTCTTCCATCAAAATGTaGTCATACTTGAAACCTAGC +
Preference number: 3 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVSSIKM*SYLKPS
Trigger: GCTAGGTTTCAAGTATGACAACATTTTGATGGAAGA...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTTTCCACATCGTCTATaGATGATGTCGCGAATAAGA +
Preference number: 3 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLFPHRL*MMSRIR
Trigger: TCTTATTCGCGACATCATCAATAGACGATGTGGAAA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp TGTAGAGCAGGGTCTTCTACAGTTACTTTAACATTATaGCCAGGGAAGCTGGCTTTTAAATGCTCAATGGAG +
Preference number: 3 (lower is better)
Translates to: CRAGSSTVTLTL*PGKLAFKCSME
Trigger: CTCCATTGAGCATTTAAAAGCCAGCTTCCCTGGTCATAATGTTAAAGTAACTGTAGAAGACCCTGCTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp GCATTCCAGCACGGATGGCTTCTATCTGTGTATGAGTaGACTGAATCGTATTACGTTTGGGTTGATTATAAG +
Preference number: 3 (lower is better)
Translates to: AFQHGWLLSVYE*TESYYVWVDYK
Trigger: CTTATAATCAACCCAAACGTAATACGATTCAGTTCACTCATACACAGATAGAAGCCATCCGTGCTGGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp CCTAGCTTGACCAAGTCATGTCGTTTTAAGGCAGCATaGGTACAGGTCATAGCAATAATTTTGGCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: PSLTKSCRFKAA*VQVIAIILASF
Trigger: GAAAGAAGCCAAAATTATTGCTATGACCTGTACTCATGCTGCCTTAAAACGACATGACTTGGTCAAGCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp AGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTaGAGGTACTACAAAAATGAGAGTTCTATTACGCTC +
Preference number: 3 (lower is better)
Translates to: SFPTSSNQGSED*RYYKNESSITL
Trigger: GAGCGTAATAGAACTCTCATTTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAACTTCAATACGATGTaGATGCTGTTGGTTCACAAA +
Preference number: 3 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLNFNTM*MLLVHK
Trigger: TTTGTGAACCAACAGCATCAACATCGTATTGAAGTT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATCCTAGTATCGCGTCCTaGGTATTTCACTCCTCTCAT +
Preference number: 3 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNPSIAS*VFHSSH
Trigger: ATGAGAGGAGTGAAATACCAAGGACGCGATACTAGG...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTCCTTTAAAAATGGGTaGAGGAGCATTTGCAAAGTA +
Preference number: 3 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSFKNG*RSICKV
Trigger: TACTTTGCAAATGCTCCTCAACCCATTTTTAAAGGA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATCTTGCCCAGATTGATTaGGCAGAGTCCTCCTATTTA +
Preference number: 3 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNLAQID*AESSYL
Trigger: TAAATAGGAGGACTCTGCCAAATCAATCTGGGCAAG...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTACGATGTTGATGCTGTaGGTTCACAAATCATACTTG +
Preference number: 3 (lower is better)
Translates to: LTLITNRPGFPSIASLVFTMLML*VHKSYL
Trigger: CAAGTATGATTTGTGAACCAACAGCATCAACATCGT...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAATACTTGAAACCTAGCTaGACCAAGTCATGTCGTTTT +
Preference number: 3 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKYLKPS*TKSCRF
Trigger: AAAACGACATGACTTGGTCAAGCTAGGTTTCAAGTA...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp CACAAATGTCCTGATGCAGTAGGATACATCATAAAATaGGAGTCTGTACCATATTCAACACAGCCTGGTAGA +
Preference number: 3 (lower is better)
Translates to: HKCPDAVGYIIK*ESVPYSTQPGR
Trigger: TCTACCAGGCTGTGTTGAATATGGTACAGACTCTCATTTTATGATGTATCCTACTGCATCAGGACATTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR TCA 72 bp ATTTCCCCTCATCACCTGACATTGACACAAATGTCCTaGTGCAGTAGGATACATCATAAAATGAGAGTCTGT +
Preference number: 3 (lower is better)
Translates to: ISPHHLTLTQMS*CSRIHHKMRVC
Trigger: ACAGACTCTCATTTTATGATGTATCCTACTGCATCAGGACATTTGTGTCAATGTCAGGTGATGAGGGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACCACCTGGGGACTTTGTaGCAATGTAGATTTAGATTT +
Preference number: 3 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNHLGTL*QCRFRF
Trigger: AAATCTAAATCTACATTGCAACAAAGTCCCCAGGTG...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAAATAATGTGCACTACTaGGGTCCCCATAACCTAAAA +
Preference number: 3 (lower is better)
Translates to: VSTSSIDDVANKMLLAIINNVHY*GPHNLK
Trigger: TTTTAGGTTATGGGGACCCAAGTAGTGCACATTATT...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp CATCTGGCAATGTACTACCTTTATTTTTCACTTTGCTaGTATACTCTTCCCAGCGAGACATTACCTGGTATA +
Preference number: 3 (lower is better)
Translates to: HLAMYYLYFSLC*YTLPSETLPGI
Trigger: TATACCAGGTAATGTCTCGCTGGGAAGAGTATATCAGCAAAGTGAAAAATAAAGGTAGTACATTGCCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR TCA 72 bp AGAAGAAGAGGGATAAAAGTTTCTATCTCCAGAATCTaGGCAGCCTCTTCCATCAAAATGTTGTCATACTTG +
Preference number: 3 (lower is better)
Translates to: RRRGIKVSISRI*AASSIKMLSYL
Trigger: CAAGTATGACAACATTTTGATGGAAGAGGCTGCTCAGATTCTGGAGATAGAAACTTTTATCCCTCTTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATTCTGCCTTCCCATATTaGAACCACATTTTACCTGAA +
Preference number: 3 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNSAFPY*NHILPE
Trigger: TTCAGGTAAAATGTGGTTCAAATATGGGAAGGCAGA...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATAATCACCTGGGGACTTaGTTGCAATGTAGATTTAGA +
Preference number: 3 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNNHLGT*LQCRFR
Trigger: TCTAAATCTACATTGCAACAAAGTCCCCAGGTGATT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR-3UTR CAA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTAAAATGTTGTCATACTaGAAACCTAGCTTGACCAAG +
Preference number: 3 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSKMLSY*KPSLTK
Trigger: CTTGGTCAAGCTAGGTTTCAAGTATGACAACATTTT...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR GCA 72 bp AATTCCTTCAAAAATTCCCAAGATTCTACAGTCAACTaGCACTCACTTGCCTTTCCAATGAATAAACCGTTT +
Preference number: 3 (lower is better)
Translates to: NSFKNSQDSTVN*HSLAFPMNKPF
Trigger: AAACGGTTTATTCATTGGAAAGGCAAGTGAGTGGCAGTTGACTGTAGAATCTTGGGAATTTTTGAAGGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CCA 72 bp GACCTTTTCTTAGGAGGCTCACATGAAGGAATGTCATaGTACATTGACCAAACTTTTATTCATTTGCATTTT +
Preference number: 3 (lower is better)
Translates to: DLFLGGSHEGMS*YIDQTFIHLHF
Trigger: AAAATGCAAATGAATAAAAGTTTGGTCAATGTACCATGACATTCCTTCATGTGAGCCTCCTAAGAAAAGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCACTAAAGGACCGCTCTaGGCAGCGGCAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSTKGPL*AAATLV
Trigger: GACCAGGGTTGCCGCTGCCCAGAGCGGTCCTTTAGT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCCACTTCAACGACAGTaGAAGCCACAATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTPLQRQ*KPQWAG
Trigger: CCCAGCCCATTGTGGCTTTCACTGTCGTTGAAGTGG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCTAACCAGCCTTGGCTaGTGCCACTCTGCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHLTSLG*CHSASN
Trigger: GTTGCTGGCAGAGTGGCATCAGCCAAGGCTGGTTAG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATGCAGATGTGGCATCCTaGGGTGTGTTAGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHADVAS*GVLASA
Trigger: GGCAGAAGCTAACACACCTCAGGATGCCACATCTGC...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCTGCCACATCTGTTTTaGCTGTACCAGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHLPHLF*LYQVGP
Trigger: TGGGCCCACCTGGTACAGGCAAAACAGATGTGGCAG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGACTAAAGGACCGCTCTaGGCAGCGGCAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRTKGPL*AAATLV
Trigger: GACCAGGGTTGCCGCTGCCCAGAGCGGTCCTTTAGT...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCTTTGCCTGTACCAGGTaGGCCCACAACCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTFACTR*AHNHSQ
Trigger: CTGACTATGGTTGTGGGCCCACCTGGTACAGGCAAA...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATAGCAGGGATGGCTTCTaGAGTGGAAGTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHSRDGF*SGSGSC
Trigger: ACAGGAGCCACTTCCACTCCAGAAGCCATCCCTGCT...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCTAGAGGAGACATTCTaGGGTAAATGCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTLEETF*GKCSPP
Trigger: GGGAGGGGAGCATTTACCCCAGAATGTCTCCTCTAG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCGCGAACAAAGCGAGTaGAGAGAGACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHREQSE*RETAPC
Trigger: ACATGGAGCAGTCTCTCTTCACTCGCTTTGTTCGCG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAATGATCTCGATCTCCTaGCCTCAGGTGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGMISIS*PQVIRP
Trigger: CGGGCGGATCACCTGAGGTCAGGAGATCGAGATCAT...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCGGTCCCAGGTACCTCTaGCTTCCCATATTTGAACCA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTGPRYL*LPIFEP
Trigger: TGGTTCAAATATGGGAAGGCAGAGGTACCTGGGACC...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCGATTCCCCATACAGATaGCCACAGCACCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTDSPYR*PQHLLS
Trigger: TGAAAGCAGGTGCTGTGGGCATCTGTATGGGGAATC...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATAGGACTACAGGTGCCTaGCACCATGGCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHRTTGA*HHGWLI
Trigger: AATTAGCCAGCCATGGTGGCAGGCACCTGTAGTCCT...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGCGCAGGGGCTGCCATaGCAGCACTCTTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLAQGLP*QHSSLH
Trigger: GTGGAGGGAAGAGTGCTGCCATGGCAGCCCCTGCGC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAAAAGCCACAATGGGCTaGGCCATTCGCGCCCAACCA +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGKATMG*AIRAQP
Trigger: TGGTTGGGCGCGAATGGCCCAGCCCATTGTGGCTTT...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCTGCACAAGCTTGCTCTaGCTCTCCCTTGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTCTSLL*LSLEHQ
Trigger: TTGATGCTCAAGGGAGAGCCAGAGCAAGCTTGTGCA...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATGATGGCCCACTGCCCTaGTTCGTACCAGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHDGPLP*FVPEKE
Trigger: TTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCCTGTCTCACTGGGGGTaGTGTCAGTTTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSLSHWG*CQFERL
Trigger: CAGCCTTTCAAACTGACACCACCCCCAGTGAGACAG...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGACTTCTGGAGTGGAAGTaGCTCCTGTCTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGLLEWK*LLSHWG
Trigger: CCCCCAGTGAGACAGGAGCCACTTCCACTCCAGAAG...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCAGATAAAGCAGGGATaGCTTCTGGAGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTQIKQG*LLEWKW
Trigger: CCACTTCCACTCCAGAAGCCATCCCTGCTTTATCTG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTCATGCTGCCTGGATTaGGGCATGGCTAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSSCCLD*GMAKHS
Trigger: TGAGTGCTTAGCCATGCCCCAATCCAGGCAGCATGA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCATTCTTCATGCTGCCTaGATTGGGGCATGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTILHAA*IGAWLS
Trigger: GCTTAGCCATGCCCCAATCCAGGCAGCATGAAGAAT...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp ACTGGGGGTGGTGTCAGTTTGAAAGGCTGGAGTTTCTaGACGGCAGCTGGTGTCTGTTGGACTGGGTATGAT +
Preference number: 4 (lower is better)
Translates to: TGGGVSLKGWSF*TAAGVCWTGYD
Trigger: ATCATACCCAGTCCAACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTTTCAAACTGACACCACCCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCTGTTGGACTGGGTATaGTGTCAGCTTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTLLDWV*CQLEQS
Trigger: TGACTGTTCAAGCTGACATCATACCCAGTCCAACAG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCCAAGACGCAGTAGGTaGCGCTCATCAATGTCTAAT +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTPRRSR*RSSMSN
Trigger: ATTAGACATTGATGAGCGCCACCTACTGCGTCTTGG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCGGCAAGAGCTGCACATaGGGTAAGTTTCCTAGATTC +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTGKSCT*GKFPRF
Trigger: GAATCTAGGAAACTTACCCCATGTGCAGCTCTTGCC...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTTTCTTGACGGCAGCTaGTGTCTGTTGGACTGGGTA +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSFLDGS*CLLDWV
Trigger: TACCCAGTCCAACAGACACCAGCTGCCGTCAAGAAA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGACAACAAGCAGAGGTATaGTGCCACCTGGTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGQQAEV*CHLVEC
Trigger: ACACTCCACCAGGTGGCATCATACCTCTGCTTGTTG...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCGAATTTCACAGCCTCTaGCATAAACCAGGCCAACCT +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSEFHSL*HKPGQP
Trigger: AGGTTGGCCTGGTTTATGTCAGAGGCTGTGAAATTC...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCGGTAGATGTTGGATATaGTCTGAACTGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTGRCWI*SELPHL
Trigger: CAGATGTGGCAGTTCAGATCATATCCAACATCTACC...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTGGGCGAGCTGTGAGCTaGCTGAAAGCTGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVGRAVS*LKAGVS
Trigger: ACTGACTCCAGCTTTCAGTCAGCTCACAGCTCGCCC...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAGCCAGTTGTAGAGGTTaGACAAGCTTGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGASCRG*TSLLWL
Trigger: GAGCCAGAGCAAGCTTGTGCAACCTCTACAACTGGC...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATAACTCTGGCAAGAGCTaGACATGGGGTAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHNSGKS*TWGKFP
Trigger: AGGAAACTTACCCCATGTGCAGCTCTTGCCAGAGTT...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAGGGCCACGATCTTCTTaGGCTGCGCAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKGPRSS*AAQGLP
Trigger: TGGCAGCCCCTGCGCAGCCCAAGAAGATCGTGGCCC...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTAAAGCCACAATGGGCTaGGCCATTCGCGCCCAACCA +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVKATMG*AIRAQP
Trigger: TGGTTGGGCGCGAATGGCCCAGCCCATTGTGGCTTT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGGATGGCCCACTGCCCTaGTTCGTACCAGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRDGPLP*FVPEKE
Trigger: TTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCGGACATCCCTCAGATaGCCCACTGCCCTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLRTSLR*PTALVR
Trigger: ACGAACCAGGGCAGTGGGCCATCTGAGGGATGTCCG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCTAGTATCGCGTCCTTaGTATTTCACTCCTCTCATC +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTLVSRP*YFTPLI
Trigger: GATGAGAGGAGTGAAATACCAAGGACGCGATACTAG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCTGGAAAAGTTATCCTaGAAGGGGGTATTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTLEKLS*KGVFVE
Trigger: CTCTACAAATACCCCCTTTCAGGATAACTTTTCCAG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATTCTATCTCCAGAATCTaGGCAGCCTCTTCCATCAAA +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHSISRI*AASSIK
Trigger: TTTGATGGAAGAGGCTGCTCAGATTCTGGAGATAGA...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTGCAGATGTGGCATCCTaGGGTGTGTTAGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVADVAS*GVLASA
Trigger: GGCAGAAGCTAACACACCTCAGGATGCCACATCTGC...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATAATGTCAGGCAGCCCTaGAATAAACGCAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHNVRQP*NKRKPK
Trigger: TTTTGGCTTGCGTTTATTTCAGGGCTGCCTGACATT...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCCTGCCACATCTGTTTTaGCTGTACCAGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITLPHLF*LYQVGP
Trigger: TGGGCCCACCTGGTACAGGCAAAACAGATGTGGCAG...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCGAGTGAAGAGAGACTaGTCCATGTTTGAGTACTTT +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTRVKRD*SMFEYF
Trigger: AAAGTACTCAAACATGGAGCAGTCTCTCTTCACTCG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCCTCAGATGGCCCACTaGCCTGGTTCGTACCAGAGA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLPQMAH*PGSYQR
Trigger: TCTCTGGTACGAACCAGGGCAGTGGGCCATCTGAGG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR GCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCGATTCTACAGTCAACTaGCACTCACTTGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSDSTVN*HSLAFP
Trigger: TGGAAAGGCAAGTGAGTGGCAGTTGACTGTAGAATC...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGATCCGGAGTACCATGCTaGATTCTGAGTCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGSGVPC*ILSQAP
Trigger: TGGAGCTTGACTCAGAATGCAGCATGGTACTCCGGA...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGGGCCACGATCTTCTTaGGCTGCGCAGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCGPRSS*AAQGLP
Trigger: TGGCAGCCCCTGCGCAGCCCAAGAAGATCGTGGCCC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTAGCAGGGATGGCTTCTaGAGTGGAAGTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVSRDGF*SGSGSC
Trigger: ACAGGAGCCACTTCCACTCCAGAAGCCATCCCTGCT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGATACAGTTTGGCTACTTaGTCTCTTCCGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGYSLAT*SLPGQM
Trigger: CATCTGCCCCGGAAGAGACCAAGTAGCCAAACTGTA...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCAGTTCCTTCCCAATTTaGACACTCAAGGGTATTCGT +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTSSFPI*TLKGIR
Trigger: ACGAATACCCTTGAGTGTCCAAATTGGGAAGGAACT...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCTTCTGGATGAGTTGTaGAAGAAATCTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHLLDEL*KKSPLL
Trigger: CAAGAGAGGAGATTTCTTTCACAACTCATCCAGAAG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCGAAATTCGACGTTCATaGCGAGATACCAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSEIRRS*RDTSNS
Trigger: AGAATTGCTGGTATCTCGTCATGAACGTCGAATTTC...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCCACTCTAAATGTCCTTaGTTCTCCTCTAAGATTGGG +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSHSKCP*FSSKIG
Trigger: CCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTG...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCAGCTCTTCTTCTCCATaGCCAAGACGCAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITSSSSP*PRRSRW
Trigger: CCACCTACTGCGTCTTGGTCATGGAGAAGAAGAGCT...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCGTTTTAAGGCAGCATaGGTACAGGTCATAGCAATA +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHRFKAA*VQVIAI
Trigger: TATTGCTATGACCTGTACTCATGCTGCCTTAAAACG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTCGCGAACAAAGCGAGTaGAGAGAGACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVREQSE*RETAPC
Trigger: ACATGGAGCAGTCTCTCTTCACTCGCTTTGTTCGCG...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCATGGGAACACTAATCTaGAATAGTCACATGGCTAGA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTMGTLI*NSHMAR
Trigger: TCTAGCCATGTGACTATTTCAGATTAGTGTTCCCAT...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCGATGTTATGATGTACTaGTTCAGAGGTCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTDVMMY*FRGPKS
Trigger: TGATTTGGGACCTCTGAATCAGTACATCATAACATC...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATTCACTCTCGATGTTATaGTGTACTGATTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHSLSML*CTDSEV
Trigger: GACCTCTGAATCAGTACATCATAACATCGAGAGTGA...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGAGGTTGCACAAGCTTaGTCTGGCTCTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLEVAQA*SGSPLS
Trigger: GCTCAAGGGAGAGCCAGAGCAAGCTTGTGCAACCTC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGCGCAGGGGCTGCCATaGCAGCACTCTTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNAQGLP*QHSSLH
Trigger: GTGGAGGGAAGAGTGCTGCCATGGCAGCCCCTGCGC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATTATTTACATGCTAACTaGGTCACGAACTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHYLHAN*VTNSAL
Trigger: CAATGCGGAGTTCGTGACCCAGTTAGCATGTAAATA...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATGGGTGGCAATCTGATTaGGCATTTTCGAATAATGTG +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHGWQSD*AFSNNV
Trigger: CACATTATTCGAAAATGCCCAATCAGATTGCCACCC...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTTTGCCTGTACCAGGTaGGCCCACAACCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITFACTR*AHNHSQ
Trigger: CTGACTATGGTTGTGGGCCCACCTGGTACAGGCAAA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCTGGTCTTCCAATCAATaGATTGTTTCCACATCGTCT +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTWSSNQ*IVSTSS
Trigger: AGACGATGTGGAAACAATCCATTGATTGGAAGACCA...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCGGACATCCCTCAGATaGCCCACTGCCCTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFRTSLR*PTALVR
Trigger: ACGAACCAGGGCAGTGGGCCATCTGAGGGATGTCCG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCGCAGCTGGTGTCTGTTaGACTGGGTATGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITAAGVC*TGYDVS
Trigger: GCTGACATCATACCCAGTCCAACAGACACCAGCTGC...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGAGAAGGACTACAGTTTaGCTACTTGGTCTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRRRTTV*LLGLFR
Trigger: CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCT...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCACAGCCAGCTTATTTTaGTTGCAGGTATCATACCTC +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSTASLF*LQVSYL
Trigger: GAGGTATGATACCTGCAACCAAAATAAGCTGGCTGT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATTCTAAGAAGAAAAACTaGAGCGTCCAAAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHSKKKN*SVQSFW
Trigger: CCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGA...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp CCCAGACTCAGGATCCTGCTTCTTGCCCAGATTGATTaGGCAGAGTCCTCCTATTTAGCTGATGACAAATCC +
Preference number: 4 (lower is better)
Translates to: PRLRILLLAQID*AESSYLADDKS
Trigger: GGATTTGTCATCAGCTAAATAGGAGGACTCTGCCAAATCAATCTGGGCAAGAAGCAGGATCCTGAGTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp AGTAGCAAGGTCCCAGGTACCTCTGCCTTCCCATATTaGAACCACATTTTACCTGAAGGTCTCCTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSKVPGTSAFPY*NHILPEGLLVA
Trigger: AGCCACAAGGAGACCTTCAGGTAAAATGTGGTTCAAATATGGGAAGGCAGAGGTACCTGGGACCTTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATTTCAGAAAGTGGGACTaGTTTCAGCACAGAGATAAA +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHFRKWD*FQHRDK
Trigger: TTTATCTCTGTGCTGAAATCAGTCCCACTTTCTGAA...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTCATCCAGCATGCCCTaGATTTCACAGCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITSSSMP*ISQPLT
Trigger: TGTCAGAGGCTGTGAAATTCAGGGCATGCTGGATGA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAGCTCTTCTTCTCCATaGCCAAGACGCAGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSSSSP*PRRSRW
Trigger: CCACCTACTGCGTCTTGGTCATGGAGAAGAAGAGCT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTATTTTTCACTTTGCTaGTATACTCTTCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSYFSLC*YTLPSE
Trigger: CTCGCTGGGAAGAGTATATCAGCAAAGTGAAAAATA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCGGCTAAATCCATCCTaGGGATTCTGTAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRRLNPS*GFCRRR
Trigger: TCTTCTTCTACAGAATCCTCAGGATGGATTTAGCCG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCATGTTGTTAGAATACTaGTTTTGTCAGCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTMLLEY*FCQQGN
Trigger: GTTACCCTGCTGACAAAATCAGTATTCTAACAACAT...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAAGGCTGGAGTTTCTTaGCGGCAGCTGGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLKAGVS*RQLVSV
Trigger: AACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCTTAAATCCTTGTAACTaGAGAGTATCGGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTLNPCN*RVSVDE
Trigger: TTCATCCACCGATACTCTTCAGTTACAAGGATTTAA...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCCTTAAAAATCTCCCATaGAGGCACGTTTTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTLKNLP*RHVFSK
Trigger: TTTAGAGAAAACGTGCCTGCATGGGAGATTTTTAAG...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGATCTCCTCTCTTGATATaGCTGTTCTCTTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGSPLLI*LFSCFW
Trigger: CCAGAAGCAAGAGAACAGGCATATCAAGAGAGGAGA...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCATTTTCGAATAATGTaGACTACTTGGGTCCCCATA +
Preference number: 4 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHHFRIM*TTWVPI
Trigger: TATGGGGACCCAAGTAGTGCACATTATTCGAAAATG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCACCCCTAGACTCTTTTaGAATCGTTTGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSTPRLF*NRLTSS
Trigger: AGAAGAAGTCAAACGATTGCAAAAGAGTCTAGGGGT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGTTAGCTTCTGCCGGTaGAGATACAGCTCCTACCAC +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLVSFCR*RYSSYH
Trigger: GTGGTAGGAGCTGTATCTGCACCGGCAGAAGCTAAC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR GCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTGCTCTTCTGGCTTATaGAAAAGGGTCACTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSCSSGL*KRVTVF
Trigger: AAAAACAGTGACCCTTTTGCATAAGCCAGAAGAGCA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCATTACACAGGCTAACTaGCAAGCATTTTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSITQAN*QAFFTG
Trigger: TCCTGTGAAAAATGCTTGGCAGTTAGCCTGTGTAAT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCATATTCAGATTGCCATaGCTTCATTCTGCTGACACT +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSIFRLP*LHSADT
Trigger: AGTGTCAGCAGAATGAAGCCATGGCAATCTGAATAT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTACAGTTTGGCTACTTaGTCTCTTCCGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITYSLAT*SLPGQM
Trigger: CATCTGCCCCGGAAGAGACCAAGTAGCCAAACTGTA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCGGGCATGGCTCTTTTTaGTTTTCTTTACAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTGHGSF*FSLQRD
Trigger: ATCTCTTTGTAAAGAAAACCAAAAAGAGCCATGCCC...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCTTACAGGAGCACAAATaGCCTATTTATGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTLQEHK*PIYAFS
Trigger: AGAAAAGGCATAAATAGGCCATTTGTGCTCCTGTAA...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAATGGCTTCATTCTGCTaGCACTATCTTCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGMASFC*HYLQCP
Trigger: AGGACATTGAAGATAGTGTCAGCAGAATGAAGCCAT...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTCATCCAGCATGCCCTaGATTTCACAGCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSSSMP*ISQPLT
Trigger: TGTCAGAGGCTGTGAAATTCAGGGCATGCTGGATGA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTTGGTCATATCTTGTTaGTACTGGTTTGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSLVISC*YWFGSK
Trigger: TTTGGATCCAAACCAGTATCAACAAGATATGACCAA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCCCTTTAAAAATGGGTTaGGGAGCATTTGCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSPLKMG*GAFAKY
Trigger: ATACTTTGCAAATGCTCCTCAACCCATTTTTAAAGG...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGCTCTGGCTCTCCCTTaGGCATCAAGGTCAACAGTC +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFALALP*ASRSTV
Trigger: GACTGTTGACCTTGATGCTCAAGGGAGAGCCAGAGC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGGGCGAGCTGTGAGCTaGCTGAAAGCTGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCGRAVS*LKAGVS
Trigger: ACTGACTCCAGCTTTCAGTCAGCTCACAGCTCGCCC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCGGTATGATGTCAGCTTaGACAGTCATGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITGMMSA*TVMASS
Trigger: AGAAGAGGCCATGACTGTTCAAGCTGACATCATACC...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAATGCAACAATATAGATaGTTTGGGGGTGGGACAGTA +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGMQQYR*FGGGTV
Trigger: TACTGTCCCACCCCCAAATCATCTATATTGTTGCAT...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCCCATGTTGGGCCGGATaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCPCWAG*SRSPDL
Trigger: GAGGTCAGGAGATCGAGATCATCCGGCCCAACATGG...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCAAGCTGGCTTTTAAATaGTCAATGGAGAGAAATGTA +
Preference number: 4 (lower is better)
Translates to: ALADATLPATQTLVVWRTKLAFK*SMERNV
Trigger: TACATTTCTCTCCATTGAGCATTTAAAAGCCAGCTT...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAGGATATGATCTGAACTaGCACATCTGTTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGGYDLN*HICFAC
Trigger: ACAGGCAAAACAGATGTGGCAGTTCAGATCATATCC...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGGGATATGATCTGAACTaGCACATCTGTTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRGYDLN*HICFAC
Trigger: ACAGGCAAAACAGATGTGGCAGTTCAGATCATATCC...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATACCTCAGATGGCCCACTaGCCTGGTTCGTACCAGAGA +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIPQMAH*PGSYQR
Trigger: TCTCTGGTACGAACCAGGGCAGTGGGCCATCTGAGG...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTTCTCTGACTCTCATTaGCCAGACTCAGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLFSDSH*PDSGSC
Trigger: GCAGGATCCTGAGTCTGGGCAATGAGAGTCAGAGAA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCCTGTCTCTTTTACCTTaGTCTGGCTCTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASLSLLP*SGSPLS
Trigger: GCTCAAGGGAGAGCCAGAGCAAGGTAAAAGAGACAG...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAGGGCAGCGGCAACCCTaGTCCACTTCCCTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKGQRQP*STSLKL
Trigger: TAACTTAAGGGAAGTGGACCAGGGTTGCCGCTGCCC...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTAACTCCGCATTGATTTaGGACACCGTAGGGGCCACG +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFNSALI*DTVGAT
Trigger: CGTGGCCCCTACGGTGTCCCAAATCAATGCGGAGTT...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGTATTTACATGCTAACTaGGTCACGAACTCCGCATTG +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRYLHAN*VTNSAL
Trigger: CAATGCGGAGTTCGTGACCCAGTTAGCATGTAAATA...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTGCATTCCAGCACGGATaGCTTCTATCTGTGTATGAG +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVAFQHG*LLSVYE
Trigger: CTCATACACAGATAGAAGCCATCCGTGCTGGAATGC...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAGAGCTGACTGAAAGCTaGAGTCAGTTCAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGELTES*SQFKTV
Trigger: AACTGTTTTGAACTGACTCCAGCTTTCAGTCAGCTC...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCTTTCTTGACGGCAGCTaGTGTCTGTTGGACTGGGTA +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASFLDGS*CLLDWV
Trigger: TACCCAGTCCAACAGACACCAGCTGCCGTCAAGAAA...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCTTCTGGAGTGGAAGTaGCTCCTGTCTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNLLEWK*LLSHWG
Trigger: CCCCCAGTGAGACAGGAGCCACTTCCACTCCAGAAG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGATCTGAAATAGTCACATaGCTAGAGTACCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGSEIVT*LEYLCL
Trigger: CAGACACAGGTACTCTAGCCATGTGACTATTTCAGA...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATACCACTTCAACGACAGTaGAAGCCACAATGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIPLQRQ*KPQWAG
Trigger: CCCAGCCCATTGTGGCTTTCACTGTCGTTGAAGTGG...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCCCCATAACCTAAAATaGTATCGTGCAGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLPHNLK*YRAASQ
Trigger: CTGACTGGCTGCACGATATCATTTTAGGTTATGGGG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGTATTTTTCACTTTGCTaGTATACTCTTCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRYFSLC*YTLPSE
Trigger: CTCGCTGGGAAGAGTATATCAGCAAAGTGAAAAATA...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTCTATCTCCAGAATCTaGGCAGCCTCTTCCATCAAA +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITSISRI*AASSIK
Trigger: TTTGATGGAAGAGGCTGCTCAGATTCTGGAGATAGA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAGCTCTGGCTCTCCCTTaGGCATCAAGGTCAACAGTC +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIALALP*ASRSTV
Trigger: GACTGTTGACCTTGATGCTCAAGGGAGAGCCAGAGC...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACATAGTCAGCCCAGGCTaGATTCCAGCACGGATGGCT +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNIVSPG*IPARMA
Trigger: AGCCATCCGTGCTGGAATGCAGCCTGGGCTGACTAT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATATAGTCAGCCCAGGCTaGATTCCAGCACGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNIVSPG*IPARMA
Trigger: AGCCATCCGTGCTGGAATGCAGCCTGGGCTGACTAT...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCGTAATCTTAGTACAGTaGTTCTCAAACTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSVILVQ*FSNYKV
Trigger: CACTTTGTAGTTTGAGAAGCACTGTACTAAGATTAC...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGGGCAGCGGCAACCCTaGTCCACTTCCCTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCGQRQP*STSLKL
Trigger: TAACTTAAGGGAAGTGGACCAGGGTTGCCGCTGCCC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAAACTCCGCATTGATTTaGGACACCGTAGGGGCCACG +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIINSALI*DTVGAT
Trigger: CGTGGCCCCTACGGTGTCCCAAATCAATGCGGAGTT...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAGATTTCTTCTTGATGTaGGGAGCCCAGTATTTACAT +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGDFFLM*GAQYLH
Trigger: ATGTAAATACTGGGCTCCCCACATCAAGAAGAAATC...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTGCACGAACTCGGGTTaGCCAGTTTTCACCTATGTT +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLCTNSG*PVFTYV
Trigger: AACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCCCAAGACGCAGTAGGTaGCGCTCATCAATGTCTAAT +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASPRRSR*RSSMSN
Trigger: ATTAGACATTGATGAGCGCCACCTACTGCGTCTTGG...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGGCAAGAGCTGCACATaGGGTAAGTTTCCTAGATTC +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLGKSCT*GKFPRF
Trigger: GAATCTAGGAAACTTACCCCATGTGCAGCTCTTGCC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCCAGCTTGAACAGTCATaGCCTCTTCTTCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITQLEQS*PLLLFP
Trigger: TGGAAACAGAAGAAGAGGCCATGACTGTTCAAGCTG...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGTCAGTTTGAAAGGCTaGAGTTTCTTGACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLVSLKG*SFLTAA
Trigger: AGCTGCCGTCAAGAAACTCCAGCCTTTCAAACTGAC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGATCATGCTCATTCTTTTaGGCATGGCTCTTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGSCSFF*AWLFLV
Trigger: AACCAAAAAGAGCCATGCCCAAAAGAATGAGCATGA...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp AATACGATGTTGATGCTGTTGGTTCACAAATCATACTaGAGTAGCAAGGTCCCAGGTACCTCTGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: NTMLMLLVHKSY*SSKVPGTSAFP
Trigger: TGGGAAGGCAGAGGTACCTGGGACCTTGCTACTCAAGTATGATTTGTGAACCAACAGCATCAACATCGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp ACCAGAAGGATTTCAATGGTAGTGTGCAGTTCTTGCTaGTTTCTTCAAAGATTCCTTGGACATGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TRRISMVVCSSC*FLQRFLGHGQA
Trigger: GGCCTGGCCATGTCCAAGGAATCTTTGAAGAAACAAGCAAGAACTGCACACTACCATTGAAATCCTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATACAACAAGCAGAGGTATaGTGCCACCTGGTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIQQAEV*CHLVEC
Trigger: ACACTCCACCAGGTGGCATCATACCTCTGCTTGTTG...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTCACTCTAAATGTCCTTaGTTCTCCTCTAAGATTGGG +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVHSKCP*FSSKIG
Trigger: CCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTG...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCGGCTAAATCCATCCTaGGGATTCTGTAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLRLNPS*GFCRRR
Trigger: TCTTCTTCTACAGAATCCTCAGGATGGATTTAGCCG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCAGACTGCTCCATGTTTaGGTACTTTTGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITRLLHV*VLLKGH
Trigger: ATGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCT...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAAAGGCTGGAGTTTCTTaGCGGCAGCTGGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIKAGVS*RQLVSV
Trigger: AACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTT...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGCTTCTTGCCCAGATTaGTTTGGCAGAGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFASCPD*FGRVLL
Trigger: TAGGAGGACTCTGCCAAATCAATCTGGGCAAGAAGC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGAACCACATTTTACCTaGAGGTCTCCTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFEPHFT*RSPCGW
Trigger: CCAGCCACAAGGAGACCTTCAGGTAAAATGTGGTTC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGCTTAAAAATCTCCCATaGAGGCACGTTTTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRLKNLP*RHVFSK
Trigger: TTTAGAGAAAACGTGCCTGCATGGGAGATTTTTAAG...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCATTTATGGTAACATCTaGACGAACTCGGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLIYGNI*TNSGWP
Trigger: TGGCCAACCCGAGTTCGTGCAGATGTTACCATAAAT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR GCA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAAAAAAGCATACATCATaGTTACGAAGACCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGKKHTS*LRRPSH
Trigger: ATGGGAAGGTCTTCGTAAGCATGATGTATGCTTTTT...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGAAAAAGCATACATCATaGTTACGAAGACCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRKKHTS*LRRPSH
Trigger: ATGGGAAGGTCTTCGTAAGCATGATGTATGCTTTTT...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCCGAGTGAAGAGAGACTaGTCCATGTTTGAGTACTTT +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITRVKRD*SMFEYF
Trigger: AAAGTACTCAAACATGGAGCAGTCTCTCTTCACTCG...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACAGGTGTGTTAGCTTCTaGCGGTGCAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNRCVSF*RCRYSS
Trigger: GGAGCTGTATCTGCACCGGCAGAAGCTAACACACCT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTAGGTGTGTTAGCTTCTaGCGGTGCAGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSRCVSF*RCRYSS
Trigger: GGAGCTGTATCTGCACCGGCAGAAGCTAACACACCT...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGATCATTCTTCATGCTaGCTGGATTGGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFDHSSC*LDWGMA
Trigger: AGCCATGCCCCAATCCAGGCAGCATGAAGAATGATC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCAGTCCGGAGTACCATaGTGCATTCTGAGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFQSGVP*CILSQA
Trigger: AGCTTGACTCAGAATGCAGCATGGTACTCCGGACTG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTATGATGCCACCTGGTaGAGTGTGTTTGAACTAAGA +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITYDATW*SVFELR
Trigger: TCTTAGTTCAAACACACTCCACCAGGTGGCATCATA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAGGTATGATGCCACCTaGTGGAGTGTGTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLRYDAT*WSVFEL
Trigger: TAGTTCAAACACACTCCACCAGGTGGCATCATACCT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTATGACCAGGGAAGCTaGCTTTTAAATGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITYDQGS*LLNAQW
Trigger: CCATTGAGCATTTAAAAGCCAGCTTCCCTGGTCATA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGCAGCTGGTGTCTGTTaGACTGGGTATGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCAAGVC*TGYDVS
Trigger: GCTGACATCATACCCAGTCCAACAGACACCAGCTGC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTCTGTCTCACTGGGGGTaGTGTCAGTTTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSLSHWG*CQFERL
Trigger: CAGCCTTTCAAACTGACACCACCCCCAGTGAGACAG...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGCTGATGACAAATCCTaGCTCAGCCTAACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFADDKS*LSLTSL
Trigger: AAGGCTGGTTAGGCTGAGCCAGGATTTGTCATCAGC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCTTCATTTCCATCCTTaGCTCAGTACAGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLHFHP*LSTAPV
Trigger: AACTGGAGCTGTACTGAGCCAAGGATGGAAATGAAG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp CAGGACCAGAAGGATTTCAATGGTAGTGTGCAGTTCTaGCTTGTTTCTTCAAAGATTCCTTGGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: QDQKDFNGSVQF*LVSSKIPWTWP
Trigger: TGGCCATGTCCAAGGAATCTTTGAAGAAACAAGCAAGAACTGCACACTACCATTGAAATCCTTCTGGTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp TTAAGGAGAGAGCACTTAACAGCCAGCTTATTTTGGTaGCAGGTATCATACCTCATATCCCCTAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRREHLTASLFW*QVSYLISPKGE
Trigger: CTCTCCCTTAGGGGATATGAGGTATGATACCTGCAACCAAAATAAGCTGGCTGTTAAGTGCTCTCTCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp GAGCTGACTGAAAGCTGGAGTCAGTTCAAAACAGTTTaGGAAGAGGGATACTCTGGCGAAGATATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: ELTESWSQFKTV*EEGYSGEDIKS
Trigger: GGACTTTATATCTTCGCCAGAGTATCCCTCTTCCAAAACTGTTTTGAACTGACTCCAGCTTTCAGTCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTTTCAGAAAGTGGGACTaGTTTCAGCACAGAGATAAA +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVFRKWD*FQHRDK
Trigger: TTTATCTCTGTGCTGAAATCAGTCCCACTTTCTGAA...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCATGGCTTCATTCTGCTaGCACTATCTTCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASMASFC*HYLQCP
Trigger: AGGACATTGAAGATAGTGTCAGCAGAATGAAGCCAT...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCTGGAAAAGTTATCCTaGAAGGGGGTATTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLEKLS*KGVFVE
Trigger: CTCTACAAATACCCCCTTTCAGGATAACTTTTCCAG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCATGTTGGATATGATCTaGACTGCCACATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITMLDMI*TATSVL
Trigger: CAAAACAGATGTGGCAGTTCAGATCATATCCAACAT...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCAGTTTCACAGGTATATaGGGCATCTCCTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCSFTGI*GISWNP
Trigger: GGGGTTCCAGGAGATGCCTCATATACCTGTGAAACT...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAAGTTTCACAGGTATATaGGGCATCTCCTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIISFTGI*GISWNP
Trigger: GGGGTTCCAGGAGATGCCTCATATACCTGTGAAACT...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTGGAATTATATGCAAATaGAGGGGGCGAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSGIICK*RGRAVS
Trigger: GCTCACAGCTCGCCCCCTTCATTTGCATATAATTCC...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAACTGTTGGACTGGGTATaGTGTCAGCTTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKLLDWV*CQLEQS
Trigger: TGACTGTTCAAGCTGACATCATACCCAGTCCAACAG...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCGGCCTGCATCCTTTATaGAGTAAGAATTGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASGLHPL*SKNWCV
Trigger: AACACACCAATTCTTACTTCATAAAGGATGCAGGCC...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGAAGCTGGCTTTTAAATaGTCAATGGAGAGAAATGTA +
Preference number: 4 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRKLAFK*SMERNV
Trigger: TACATTTCTCTCCATTGAGCATTTAAAAGCCAGCTT...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCACCCCTAGACTCTTTTaGAATCGTTTGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITTPRLF*NRLTSS
Trigger: AGAAGAAGTCAAACGATTGCAAAAGAGTCTAGGGGT...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGTTAGCTTCTGCCGGTaGAGATACAGCTCCTACCAC +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNVSFCR*RYSSYH
Trigger: GTGGTAGGAGCTGTATCTGCACCGGCAGAAGCTAAC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTCCATTCACATCTCTTaGAGAAGTCGACAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSIHIS*RSRQKC
Trigger: GCACTTTTGTCGACTTCTGCAAGAGATGTGAATGGA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCTTCCCTCCACTCCAGTaGAAACTAAAGGACCGCTCT +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCFPPLQ*KLKDRS
Trigger: AGAGCGGTCCTTTAGTTTCCACTGGAGTGGAGGGAA...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTATGATGCCACCTGGTaGAGTGTGTTTGAACTAAGA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLYDATW*SVFELR
Trigger: TCTTAGTTCAAACACACTCCACCAGGTGGCATCATA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTATATTCAGATTGCCATaGCTTCATTCTGCTGACACT +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVIFRLP*LHSADT
Trigger: AGTGTCAGCAGAATGAAGCCATGGCAATCTGAATAT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTTGCACGAACTCGGGTTaGCCAGTTTTCACCTATGTT +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFCTNSG*PVFTYV
Trigger: AACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCA...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTATGACCAGGGAAGCTaGCTTTTAAATGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLYDQGS*LLNAQW
Trigger: CCATTGAGCATTTAAAAGCCAGCTTCCCTGGTCATA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGCATTCCAGCACGGATaGCTTCTATCTGTGTATGAG +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFAFQHG*LLSVYE
Trigger: CTCATACACAGATAGAAGCCATCCGTGCTGGAATGC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACTGCTGTACTAAACTCTaGCAAGAGCTGCACATGGGG +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNCCTKL*QELHMG
Trigger: CCCCATGTGCAGCTCTTGCCAGAGTTTAGTACAGCA...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATTGCTGTACTAAACTCTaGCAAGAGCTGCACATGGGG +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNCCTKL*QELHMG
Trigger: CCCCATGTGCAGCTCTTGCCAGAGTTTAGTACAGCA...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTCAGATAAAGCAGGGATaGCTTCTGGAGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSQIKQG*LLEWKW
Trigger: CCACTTCCACTCCAGAAGCCATCCCTGCTTTATCTG...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGCCTGGATTGGGGCATaGCTAAGCACTCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCAWIGA*LSTQVK
Trigger: TTTGACTTGAGTGCTTAGCCATGCCCCAATCCAGGC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp ATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTaGGTATTTCACTCCTCTCATCGTCTCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: ITNRPGFPSIAS*VFHSSHRLITF
Trigger: GAAAGTGATGAGACGATGAGAGGAGTGAAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATGAATTTCACAGCCTCTaGCATAAACCAGGCCAACCT +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNEFHSL*HKPGQP
Trigger: AGGTTGGCCTGGTTTATGTCAGAGGCTGTGAAATTC...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCAGGTCCATCTTCAATaGCACGTCCTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFQVHLQ*HVLYHP
Trigger: TGGATGATAAAGGACGTGTCATTGAAGATGGACCTG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCGTTACTTTAACATTATaGCCAGGGAAGCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASVTLTL*PGKLAF
Trigger: AAAAGCCAGCTTCCCTGGTCATAATGTTAAAGTAAC...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCATGTTGGATATGATCTaGACTGCCACATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLMLDMI*TATSVL
Trigger: CAAAACAGATGTGGCAGTTCAGATCATATCCAACAT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCTCTTCCATACCTGCTaGAATCTTTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFLFHTC*NLSLSP
Trigger: TGGAGACAGAGAAAGATTTCAGCAGGTATGGAAGAG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCGATTCTCCCACTCCTTaGAAATCTTCAACATTAATG +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITDSPTP*KSSTLM
Trigger: CATTAATGTTGAAGATTTTCAAGGAGTGGGAGAATC...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCATGTTGTTAGAATACTaGTTTTGTCAGCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITMLLEY*FCQQGN
Trigger: GTTACCCTGCTGACAAAATCAGTATTCTAACAACAT...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGGAATTATATGCAAATaGAGGGGGCGAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNGIICK*RGRAVS
Trigger: GCTCACAGCTCGCCCCCTTCATTTGCATATAATTCC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACACTACAAAGTGCCTGTaGATCACCTGGGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNTTKCL*ITWGLC
Trigger: ACAAAGTCCCCAGGTGATTCACAGGCACTTTGTAGT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCTACCATGCTGCATTCTaGGTCAAGCTCCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCYHAAF*VKLQET
Trigger: AGTTTCCTGGAGCTTGACTCAGAATGCAGCATGGTA...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCTTAGGAGGCTCACATaGAGGAATGTCATGGTACAT +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFLRRLT*RNVMVH
Trigger: ATGTACCATGACATTCCTTCATGTGAGCCTCCTAAG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAATCTCCTCTCTTGATATaGCTGTTCTCTTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKSPLLI*LFSCFW
Trigger: CCAGAAGCAAGAGAACAGGCATATCAAGAGAGGAGA...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAACCTAAAATGATATCGTaGAGCCAGTCAGGTACCACA +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKPKMIS*SQSGTT
Trigger: TGTGGTACCTGACTGGCTGCACGATATCATTTTAGG...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCATTTTCGAATAATGTaGACTACTTGGGTCCCCATA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLHFRIM*TTWVPI
Trigger: TATGGGGACCCAAGTAGTGCACATTATTCGAAAATG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR GCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTAACTCTGGCAAGAGCTaGACATGGGGTAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSNSGKS*TWGKFP
Trigger: AGGAAACTTACCCCATGTGCAGCTCTTGCCAGAGTT...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCCCAGACTCAGGATCCTaGTTCTTGCCCAGATTGATT +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCPDSGS*FLPRLI
Trigger: AATCAATCTGGGCAAGAAGCAGGATCCTGAGTCTGG...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCCTTGATCATTCTTCATaGTGCCTGGATTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCLDHSS*CLDWGM
Trigger: CATGCCCCAATCCAGGCAGCATGAAGAATGATCAAG...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCGAATGGGAAGTGGTCTaGCTTCTTCTTAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASEWEVV*LLLKNL
Trigger: GAGATTTTTAAGAAGAAGCCAGACCACTTCCCATTC...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTACTGCAAATTCAATTTaGGAAGAGCAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVTANSI*EEQDNL
Trigger: AAGGTTGTCTTGCTCTTCCCAAATTGAATTTGCAGT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACAGGTGCCTGCCACCATaGCTGGCTAATTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNRCLPP*LANFCL
Trigger: AAGACAAAAATTAGCCAGCCATGGTGGCAGGCACCT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp CATTCACATCTCTTGCAGAAGTCGACAAAAGTGCTTTaGGATTTATGGATAGCCAAGTTCCTGGATAGCCAA +
Preference number: 4 (lower is better)
Translates to: HSHLLQKSTKVL*DLWIAKFLDSQ
Trigger: TTGGCTATCCAGGAACTTGGCTATCCATAAATCCAAAAGCACTTTTGTCGACTTCTGCAAGAGATGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTTGGTCATATCTTGTTaGTACTGGTTTGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLVISC*YWFGSK
Trigger: TTTGGATCCAAACCAGTATCAACAAGATATGACCAA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATCCCCATAACCTAAAATaGTATCGTGCAGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNPHNLK*YRAASQ
Trigger: CTGACTGGCTGCACGATATCATTTTAGGTTATGGGG...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCTATCTGTGTATGAGTaGACTGAATCGTATTACGTT +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLSVYE*TESYYV
Trigger: AACGTAATACGATTCAGTTCACTCATACACAGATAG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAGGTAGATGTTGGATATaGTCTGAACTGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIGRCWI*SELPHL
Trigger: CAGATGTGGCAGTTCAGATCATATCCAACATCTACC...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCAATGTCTAATGCCATaGTTTTCTCAAACAACTGGT +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLQCLMP*FSQTTG
Trigger: ACCAGTTGTTTGAGAAAATCATGGCATTAGACATTG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR TCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCTCTTCCATACCTGCTaGAATCTTTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNLFHTC*NLSLSP
Trigger: TGGAGACAGAGAAAGATTTCAGCAGGTATGGAAGAG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCCCTTTAAAAATGGGTTaGGGAGCATTTGCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASPLKMG*GAFAKY
Trigger: ATACTTTGCAAATGCTCCTCAACCCATTTTTAAAGG...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGGTATGATGTCAGCTTaGACAGTCATGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNGMMSA*TVMASS
Trigger: AGAAGAGGCCATGACTGTTCAAGCTGACATCATACC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCTGCCTTCCCATATTTaGACCACATTTTACCTGAAG +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFLPSHI*TTFYLK
Trigger: CTTCAGGTAAAATGTGGTTCAAATATGGGAAGGCAG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATACAGAGAATGCTCAGTaGCCTTTTCTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNTENAQ*PFLRRL
Trigger: GAGCCTCCTAAGAAAAGGTCACTGAGCATTCTCTGT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAACCATACCATCTTCAATaGCACGTCCTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKPYHLQ*HVLYHP
Trigger: TGGATGATAAAGGACGTGTCATTGAAGATGGTATGG...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCTTCTATTACGCTCTCTaGGGTCAATGCTATCTTTAT +
Preference number: 4 (lower is better)
Translates to: SSSWERFCWNYMQMKGASFYYAL*GQCYLY
Trigger: ATAAAGATAGCATTGACCTCAGAGAGCGTAATAGAA...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAACAAGGGTCAGAAGACTaGAGGTACTACAAAAATGAG +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKQGSED*RYYKNE
Trigger: CTCATTTTTGTAGTACCTTCAGTCTTCTGACCCTTG...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCCCTAAAATGATATCGTaGAGCCAGTCAGGTACCACA +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCPKMIS*SQSGTT
Trigger: TGTGGTACCTGACTGGCTGCACGATATCATTTTAGG...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATAGGTATGATGCCACCTaGTGGAGTGTGTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNRYDAT*WSVFEL
Trigger: TAGTTCAAACACACTCCACCAGGTGGCATCATACCT...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTAGTTCAAAACAGTTTTaGAAGAGGGATACTCTGGCG +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFSSKQF*KRDTLA
Trigger: CGCCAGAGTATCCCTCTTCCAAAACTGTTTTGAACT...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACCAGCTTGAACAGTCATaGCCTCTTCTTCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNQLEQS*PLLLFP
Trigger: TGGAAACAGAAGAAGAGGCCATGACTGTTCAAGCTG...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGTCAGTTTGAAAGGCTaGAGTTTCTTGACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNVSLKG*SFLTAA
Trigger: AGCTGCCGTCAAGAAACTCCAGCCTTTCAAACTGAC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATAGAAGGACTACAGTTTaGCTACTTGGTCTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNRRTTV*LLGLFR
Trigger: CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCCTGAAGGTCTCCTTGTaGCTGGTTATCCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCLKVSL*LVIPRK
Trigger: TTTTCTTGGGATAACCAGCCACAAGGAGACCTTCAG...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATAAGGCACTGCTCTTCTaGCTTATGCAAAAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNKALLF*LMQKGH
Trigger: GTGACCCTTTTGCATAAGCCAGAAGAGCAGTGCCTT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAATAAGCTGCTGTACTTaGCTTCGTATCAAGTCTACT +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKISCCT*LRIKST
Trigger: AGTAGACTTGATACGAAGTCAAGTACAGCAGCTTAT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTAGAAATCTCCTCTCTTaGTATGCCTGTTCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSRNLLS*YACSLA
Trigger: AGCAAGAGAACAGGCATATCAAGAGAGGAGATTTCT...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTGAAATTCGACGTTCATaGCGAGATACCAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSEIRRS*RDTSNS
Trigger: AGAATTGCTGGTATCTCGTCATGAACGTCGAATTTC...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCGTTTTAAGGCAGCATaGGTACAGGTCATAGCAATA +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNRFKAA*VQVIAI
Trigger: TATTGCTATGACCTGTACTCATGCTGCCTTAAAACG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTTTGACACAAATGTCCTaGTGCAGTAGGATACATCAT +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFLTQMS*CSRIHH
Trigger: ATGATGTATCCTACTGCATCAGGACATTTGTGTCAA...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCTCATCTAGGCAAGAGTaGTGTACATTGCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCSSRQE*CTLLGQ
Trigger: TTGTCCAAGCAATGTACATCACTCTTGCCTAGATGA...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCACCTGGGGACTTTGTTaGAATGTAGATTTAGATTTA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLTWGLC*NVDLDL
Trigger: TAAATCTAAATCTACATTGCAACAAAGTCCCCAGGT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAGAATAGTACTCAGTTaGGACAATATTTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLRIVLS*DNIFIP
Trigger: TGGGATGAAAATATTGTCCCAACTGAGTACTATTCT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTAGTTTTCACCTATGTTaGGTTTGGCCACTTCAACGA +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSSFHLC*VWPLQR
Trigger: TCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACT...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAGGGTGGCAATCTGATTaGGCATTTTCGAATAATGTG +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIGWQSD*AFSNNV
Trigger: CACATTATTCGAAAATGCCCAATCAGATTGCCACCC...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAAGTTCAAAACAGTTTTaGAAGAGGGATACTCTGGCG +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIISSKQF*KRDTLA
Trigger: CGCCAGAGTATCCCTCTTCCAAAACTGTTTTGAACT...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTGAGCTGACTGAAAGCTaGAGTCAGTTCAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSELTES*SQFKTV
Trigger: AACTGTTTTGAACTGACTCCAGCTTTCAGTCAGCTC...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 72 bp GGTCTTCCAATCAATGGATTGTTTCCACATCGTCTATaGATGATGTCGCGAATAAGATGCTTTTGGCCATTA +
Preference number: 4 (lower is better)
Translates to: GLPINGLFPHRL*MMSRIRCFWPL
Trigger: TAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAACAATCCATTGATTGGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACATAAGCTGCTGTACTTaGCTTCGTATCAAGTCTACT +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNISCCT*LRIKST
Trigger: AGTAGACTTGATACGAAGTCAAGTACAGCAGCTTAT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATAGAAATCTCCTCTCTTaGTATGCCTGTTCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNRNLLS*YACSLA
Trigger: AGCAAGAGAACAGGCATATCAAGAGAGGAGATTTCT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGTTACTTTAACATTATaGCCAGGGAAGCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCVTLTL*PGKLAF
Trigger: AAAAGCCAGCTTCCCTGGTCATAATGTTAAAGTAAC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATAGACTGCTCCATGTTTaGGTACTTTTGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNRLLHV*VLLKGH
Trigger: ATGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCTTTACTCAGACTTTTTaGCTGCCATGTCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCFTQTF*LPCPPL
Trigger: TAAAGGAGGACATGGCAGTCAAAAAGTCTGAGTAAA...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTTGCTACTACATATTCTaGCTCTCCAAGATTCTGATA +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFCYYIF*LSKILI
Trigger: TATCAGAATCTTGGAGAGGCAGAATATGTAGTAGCA...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCATTCAGTCTGAGGTGTaGCTCAAGAATAAACAGACA +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCIQSEV*LKNKQT
Trigger: TGTCTGTTTATTCTTGAGGCACACCTCAGACTGAAT...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAGATTTCTTCTTGATGTaGGGAGCCCAGTATTTACAT +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIDFFLM*GAQYLH
Trigger: ATGTAAATACTGGGCTCCCCACATCAAGAAGAAATC...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGAATGGGAAGTGGTCTaGCTTCTTCTTAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCEWEVV*LLLKNL
Trigger: GAGATTTTTAAGAAGAAGCCAGACCACTTCCCATTC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATAGTTTTCACCTATGTTaGGTTTGGCCACTTCAACGA +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNSFHLC*VWPLQR
Trigger: TCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATTGGTCTTCCAATCAATaGATTGTTTCCACATCGTCT +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNWSSNQ*IVSTSS
Trigger: AGACGATGTGGAAACAATCCATTGATTGGAAGACCA...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCAGAGAAATGTATCATTaGAATCAAGGGTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCREMYH*NQGWQS
Trigger: AGATTGCCACCCTTGATTTCAATGATACATTTCTCT...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTAGAGAAATGTATCATTaGAATCAAGGGTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSREMYH*NQGWQS
Trigger: AGATTGCCACCCTTGATTTCAATGATACATTTCTCT...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACGATTCTCCCACTCCTTaGAAATCTTCAACATTAATG +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNDSPTP*KSSTLM
Trigger: CATTAATGTTGAAGATTTTCAAGGAGTGGGAGAATC...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACTTCCCTTGCTTGGCCTaGTACCAAATATTTACAAAT +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNFPCLA*YQIFTN
Trigger: ATTTGTAAATATTTGGTATCAGGCCAAGCAAGGGAA...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR TCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACCTCAACTGTTGGCAATaGACTTTCTTAACTCAGAAT +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNLNCWQ*TFLTQN
Trigger: ATTCTGAGTTAAGAAAGTTCATTGCCAACAGTTGAG...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTTGCTACTACATATTCTaGCTCTCCAAGATTCTGATA +
Preference number: 4 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSCYYIF*LSKILI
Trigger: TATCAGAATCTTGGAGAGGCAGAATATGTAGTAGCA...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTATGTCGCGAATAAGATaGTTTTGGCCATTATATGTT +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFMSRIR*FWPLYV
Trigger: AACATATAATGGCCAAAAGCATCTTATTCGCGACAT...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCAATTGCTTCATTTCATaGTCATTCTTTTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCNCFIS*SFFWAW
Trigger: CCATGCCCAAAAGAATGAGCATGAAATGAAGCAATT...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAAGAATAGTACTCAGTTaGGACAATATTTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKRIVLS*DNIFIP
Trigger: TGGGATGAAAATATTGTCCCAACTGAGTACTATTCT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACACTGCAAATTCAATTTaGGAAGAGCAAGACAACCTT +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNTANSI*EEQDNL
Trigger: AAGGTTGTCTTGCTCTTCCCAAATTGAATTTGCAGT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTTTTTCCACTTCTTACTaGAAAAGTTATCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LTLITNRPGFPSIASLVFFSTSY*KSYPER
Trigger: CCTTTCAGGATAACTTTTCCAGTAAGAAGTGGAAAA...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAATTTTCCACTTCTTACTaGAAAAGTTATCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKFSTSY*KSYPER
Trigger: CCTTTCAGGATAACTTTTCCAGTAAGAAGTGGAAAA...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATGACTTCCGTAACATCTaGCAATGTACTACCTTTATT +
Preference number: 4 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNDFRNI*QCTTFI
Trigger: AATAAAGGTAGTACATTGCCAGATGTTACGGAAGTC...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAACTCAAGGGTATTCGTaGTTAAGTCCAGTATATTCT +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIITQGYS*LSPVYS
Trigger: AGAATATACTGGACTTAACCACGAATACCCTTGAGT...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
3UTR CAA 72 bp CTTTTATCGGAGAAATTACATAACAGGCTATCTGGCTaGATCCTTACTCTGATAACAAATAGACCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LLSEKLHNRLSG*ILTLITNRPGF
Trigger: AAACCCAGGTCTATTTGTTATCAGAGTAAGGATCAAGCCAGATAGCCTGTTATGTAATTTCTCCGATAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp TACCACATGACACTCAATAAATTACACTACGACATTTaGTACAAATCACTTCACTTCTGGTTTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: YHMTLNKLHYDI*YKSLHFWFPLR
Trigger: CCGAAGAGGAAACCAGAAGTGAAGTGATTTGTACAAAATGTCGTAGTGTAATTTATTGAGTGTCATGTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp GGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTaGACCTTGAAATCTATCAACAGTTGTCACCTTGTT +
Preference number: 4 (lower is better)
Translates to: GSYQRKKNIVIL*TLKSINSCHLV
Trigger: AACAAGGTGACAACTGTTGATAGATTTCAAGGTCAACAGAATGACTATATTCTTCTTTCTCTGGTACGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR TCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATCAATGTCTAATGCCATaGTTTTCTCAAACAACTGGT +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNQCLMP*FSQTTG
Trigger: ACCAGTTGTTTGAGAAAATCATGGCATTAGACATTG...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAATGTCGCGAATAAGATaGTTTTGGCCATTATATGTT +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIMSRIR*FWPLYV
Trigger: AACATATAATGGCCAAAAGCATCTTATTCGCGACAT...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR GCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACATTTCAATGGTAGTGTaGAGTTCTTGCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNISMVV*SSCLFL
Trigger: AAGAAACAAGCAAGAACTGCACACTACCATTGAAAT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR GCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATCCAGCTTATTTTGGTTaGAGGTATCATACCTCATAT +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNPAYFG*RYHTSY
Trigger: ATATGAGGTATGATACCTGCAACCAAAATAAGCTGG...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACTATCATAGTGAATTGTaGTCATCTCATTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNYHSEL*SSHSLS
Trigger: TGACAGAGAATGAGATGACCACAATTCACTATGATA...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATATATCATAGTGAATTGTaGTCATCTCATTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIYHSEL*SSHSLS
Trigger: TGACAGAGAATGAGATGACCACAATTCACTATGATA...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGACTTCCGTAACATCTaGCAATGTACTACCTTTATT +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNDFRNI*QCTTFI
Trigger: AATAAAGGTAGTACATTGCCAGATGTTACGGAAGTC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATTTTGCAAAGTATTCATaGAAAGGGAAGAAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNFAKYS*KGKKVE
Trigger: CTCCACTTTCTTCCCTTTCCATGAATACTTTGCAAA...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGTGATGTACATTGCTTaGACAATAGTTAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNVMYIA*TIVKER
Trigger: TCTCTCCTTAACTATTGTCCAAGCAATGTACATCAC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACAGTCAAAGGATTAGTTaGCAATATCCTACATTGTCA +
Preference number: 4 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNSQRIS*QYPTLS
Trigger: TGACAATGTAGGATATTGCCAACTAATCCTTTGACT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CCA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATCATGAAGGAATGTCATaGTACATTGACCAAACTTTT +
Preference number: 4 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNHEGMS*YIDQTF
Trigger: AAAAGTTTGGTCAATGTACCATGACATTCCTTCATG...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
3UTR CAA 72 bp ATGAAGGAAATAAATTATTTGGTCCATTCACATCTCTaGCAGAAGTCGACAAAAGTGCTTTTGGATTTATGG +
Preference number: 4 (lower is better)
Translates to: MKEINYLVHSHL*QKSTKVLLDLW
Trigger: CCATAAATCCAAAAGCACTTTTGTCGACTTCTGCAAGAGATGTGAATGGACCAAATAATTTATTTCCTTCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS CCA 90 bp GGCTGCGCAGGGGCTGCCATGGCAGCACTCTTCCCTCCACTCCAGTaGAAACTAAAGGACCGCTCTGGGCAGCGGCAACCCTGGTCCACT +
Preference number: 5 (lower is better)
Translates to: GCAGAAMAALFPPLQ*KLKDRSGQRQPWST
Trigger: AGTGGACCAGGGTTGCCGCTGCCCAGAGCGGTCCTTTAGTTTCCACTGGAGTGGAGGGAAGAGTGCTGCCATGGCAGCCCCTGCGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCGGGGCCACGATCTTCTaGGGCTGCGCAGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ALADATLPATQTLVVWRTGATIF*GCAGAA
Trigger: GGCAGCCCCTGCGCAGCCCAAGAAGATCGTGGCCCC...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS CCA 90 bp CCACTCCAGTGGAAACTAAAGGACCGCTCTGGGCAGCGGCAACCCTaGTCCACTTCCCTTAAGTTACTGCCGGGGCGCTTAACTCCGCGC +
Preference number: 5 (lower is better)
Translates to: PLQWKLKDRSGQRQP*STSLKLLPGRLTPR
Trigger: GCGCGGAGTTAAGCGCCCCGGCAGTAACTTAAGGGAAGTGGACCAGGGTTGCCGCTGCCCAGAGCGGTCCTTTAGTTTCCACTGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CCA 90 bp GCCCAGTATTTACATGCTAACTGGGTCACGAACTCCGCATTGATTTaGGACACCGTAGGGGCCACGATCTTCTTGGGCTGCGCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: AQYLHANWVTNSALI*DTVGATIFLGCAGA
Trigger: AGCCCCTGCGCAGCCCAAGAAGATCGTGGCCCCTACGGTGTCCCAAATCAATGCGGAGTTCGTGACCCAGTTAGCATGTAAATACTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTGGGGCCACGATCTTCTaGGGCTGCGCAGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVGATIF*GCAGAA
Trigger: GGCAGCCCCTGCGCAGCCCAAGAAGATCGTGGCCCC...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCGAACTCCGCATTGATTaGGGACACCGTAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: ALADATLPATQTLVVWRTELRID*GHRRGH
Trigger: GTGGCCCCTACGGTGTCCCAAATCAATGCGGAGTTC...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATGTCACGAACTCCGCATaGATTTGGGACACCGTAGGG +
Preference number: 5 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHVTNSA*IWDTVG
Trigger: CCCTACGGTGTCCCAAATCAATGCGGAGTTCGTGAC...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCAGAGGTTGCACAAGCTaGCTCTGGCTCTCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSRGCTS*LWLSLE
Trigger: CTCAAGGGAGAGCCAGAGCAAGCTTGTGCAACCTCT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS TCA 90 bp TTGGCCAGTTTTCACCTATGTTGGGTTTGGCCACTTCAACGACAGTaGAAGCCACAATGGGCTGGGCCATTCGCGCCCAACCACCAAACA +
Preference number: 5 (lower is better)
Translates to: LASFHLCWVWPLQRQ*KPQWAGPFAPNHQT
Trigger: TGTTTGGTGGTTGGGCGCGAATGGCCCAGCCCATTGTGGCTTTCACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CCA 90 bp ATGTTGGGTTTGGCCACTTCAACGACAGTGAAAGCCACAATGGGCTaGGCCATTCGCGCCCAACCACCAAACACTACACCGCCATATTCA +
Preference number: 5 (lower is better)
Translates to: MLGLATSTTVKATMG*AIRAQPPNTTPPYS
Trigger: TGAATATGGCGGTGTAGTGTTTGGTGGTTGGGCGCGAATGGCCCAGCCCATTGTGGCTTTCACTGTCGTTGAAGTGGCCAAACCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCAAAGGCTGGAGTTTCTaGACGGCAGCTGGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSKGWSF*TAAGVC
Trigger: ACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTTT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCCTACAGTTTGGCTACTaGGTCTCTTCCGGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSLQFGY*VSSGAD
Trigger: ATCTGCCCCGGAAGAGACCAAGTAGCCAAACTGTAG...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCTCAGGATCCTGCTTCTaGCCCAGATTGATTTGGCAG +
Preference number: 5 (lower is better)
Translates to: ALADATLPATQTLVVWRTSGSCF*PRLIWQ
Trigger: CTGCCAAATCAATCTGGGCAAGAAGCAGGATCCTGA...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCCAGTTTTCACCTATGTaGGGTTTGGCCACTTCAACG +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSQFSPM*GLATST
Trigger: CGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTG...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCCCTAGTATCGCGTCCTaGGTATTTCACTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSPSIAS*VFHSSH
Trigger: ATGAGAGGAGTGAAATACCAAGGACGCGATACTAGG...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp GCCTTGGCTGATGCCACTCTGCCAGCAACCCAAACATTAGTGGTGTGGAGAACCAAGAAATCTCCTCTCTaGATATGCCTGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: ALADATLPATQTLVVWRTKKSPL*ICLFSC
Trigger: GCAAGAGAACAGGCATATCAAGAGAGGAGATTTCTT...GGTTCTCCACACCACTAATGTTTGGGTTGCTGGCAGAGTGGCATCAGCCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCAGTTCAAAACAGTTTaGGAAGAGGGATACTCTGGC +
Preference number: 5 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHQFKTV*EEGYSG
Trigger: GCCAGAGTATCCCTCTTCCAAAACTGTTTTGAACTG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTTCATGCTCATTCTTTaGGGCATGGCTCTTTTTGGT +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSFMLIL*GMALFG
Trigger: ACCAAAAAGAGCCATGCCCAAAAGAATGAGCATGAA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGAAAAGGTGATTTCTTCTaGATGTGGGGAGCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGKGDFF*MWGAQY
Trigger: ATACTGGGCTCCCCACATCAAGAAGAAATCACCTTT...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATGACGAATTTCATAAGTaGATTCTAAGCGGAAGAGGT +
Preference number: 5 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHDEFHK*ILSGRG
Trigger: ACCTCTTCCGCTTAGAATCAACTTATGAAATTCGTC...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCTGCACGAACTCGGGTaGGCCAGTTTTCACCTATGT +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLLHELG*ASFHLC
Trigger: ACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCAATAATGTGCACTACTaGGGTCCCCATAACCTAAAA +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSNNVHY*GPHNLK
Trigger: TTTTAGGTTATGGGGACCCAAGTAGTGCACATTATT...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAACTGCCACATCTGTTTaGCCTGTACCAGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKTATSV*PVPGGP
Trigger: GGGCCCACCTGGTACAGGCAAAACAGATGTGGCAGT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGGGGGTGGTGTCAGTTaGAAAGGCTGGAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLGGGVS*KGWSFL
Trigger: CAAGAAACTCCAGCCTTTCAAACTGACACCACCCCC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATCACCTGGGGACTTTGTaGCAATGTAGATTTAGATTT +
Preference number: 5 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHHLGTL*QCRFRF
Trigger: AAATCTAAATCTACATTGCAACAAAGTCCCCAGGTG...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTCGTATCGGCCATCTTaGTACATAAGGTCAAAATGT +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSSYRPS*YIRSKC
Trigger: ACATTTTGACCTTATGTACAAAGATGGCCGATACGA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp AAAGCTGGCACACTGTCAGTCCGGAGTACCATGCTGCATTCTGAGTCAAGCTCCTGCATTTTCAGGATGTaGCGATTAATACCACATGAC +
Preference number: 5 (lower is better)
Translates to: KAGTLSVRSTMLHSESSSCIFRM*RLIPHD
Trigger: GTCATGTGGTATTAATCGCAACATCCTGAAAATGCA...GGAGCTTGACTCAGAATGCAGCATGGTACTCCGGACTGACAGTGTGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCCTGTCTCTTTTACCTaGCTCTGGCTCTCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLPVSFT*LWLSLE
Trigger: CTCAAGGGAGAGCCAGAGCAAGGTAAAAGAGACAGG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS TCA 90 bp TGTTGTTATGTGTGGATATTATACCTGGGAATTCTGTTGCCACTCTaGCCATGTGGAGAACTGGGCTCACATGCTGACATTAGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: CCYVWILYLGILLPL*PCGELGSHADISRA
Trigger: TGCCCTGCTAATGTCAGCATGTGAGCCCAGTTCTCCACATGGTCAGAGTGGCAACAGAATTCCCAGGTATAATATCCACACATAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS-3UTR CAA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAGAACTCCGCATTGATTaGGGACACCGTAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIELRID*GHRRGH
Trigger: GTGGCCCCTACGGTGTCCCAAATCAATGCGGAGTTC...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGAAGAAATCTCCTCTCTaGATATGCCTGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRKKSPL*ICLFSC
Trigger: GCAAGAGAACAGGCATATCAAGAGAGGAGATTTCTT...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TCTGGGCACCATGCCCAGGGACCTTGTAAGCAGAGGTCCCTTGTCAGAAAACATTGTTGTATACAAAGTTaGCCATCTGGGGCATATTTT +
Preference number: 5 (lower is better)
Translates to: SGHHAQGPCKQRSLVRKHCCIQS*PSGAYF
Trigger: AAAATATGCCCCAGATGGCAAACTTTGTATACAACA...ATGTTTTCTGACAAGGGACCTCTGCTTACAAGGTCCCTGGGCATGGTGCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGGGTATGATGTCAGCTaGAACAGTCATGGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLGYDVS*NSHGLF
Trigger: GAAGAGGCCATGACTGTTCAAGCTGACATCATACCC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CCA 90 bp ATCTCTGACATTGAGATTTATGGTAACATCTGCACGAACTCGGGTTaGCCAGTTTTCACCTATGTTGGGTTTGGCCACTTCAACGACAGT +
Preference number: 5 (lower is better)
Translates to: ISDIEIYGNICTNSG*PVFTYVGFGHFNDS
Trigger: ACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTTACCATAAATCTCAATGTCAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAACTGCACGAACTCGGGTaGGCCAGTTTTCACCTATGT +
Preference number: 5 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKLHELG*ASFHLC
Trigger: ACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAG...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATACTGCCACATCTGTTTaGCCTGTACCAGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNTATSV*PVPGGP
Trigger: GGGCCCACCTGGTACAGGCAAAACAGATGTGGCAGT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGTTTCCACATCGTCTATaGATGATGTCGCGAATAAGA +
Preference number: 5 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRFPHRL*MMSRIR
Trigger: TCTTATTCGCGACATCATCAATAGACGATGTGGAAA...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGGAAATCTATCAACAGTaGTCACCTTGTTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFREIYQQ*SPCLVF
Trigger: GAAGACCAAACAAGGTGACAACTGTTGATAGATTTC...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTAAGTTCCTTCCCAATTaGGACACTCAAGGGTATTCG +
Preference number: 5 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVKFLPN*DTQGYS
Trigger: CGAATACCCTTGAGTGTCCAAATTGGGAAGGAACTT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTCTTCATTTCCATCCTaGGCTCAGTACAGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSSFPS*AQYSSS
Trigger: ACTGGAGCTGTACTGAGCCAAGGATGGAAATGAAGA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGTCGACAAAAGTGCTTTaGGATTTATGGATAGCCAAG +
Preference number: 5 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRSTKVL*DLWIAK
Trigger: CTTGGCTATCCATAAATCCAAAAGCACTTTTGTCGA...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS GCA 90 bp ACGTCCTTTGTTGTTATGTGTGGATATTATACCTGGGAATTCTGTTaGCACTCTGACCATGTGGAGAACTGGGCTCACATGCTGACATTA +
Preference number: 5 (lower is better)
Translates to: TSFVVMCGYYTWEFC*HSDHVENWAHMLTL
Trigger: TAATGTCAGCATGTGAGCCCAGTTCTCCACATGGTCAGAGTGGCAACAGAATTCCCAGGTATAATATCCACACATAACAACAAAGGACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTTCACCATACAGCAGATaGACATTAAATAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVSPYSR*TLNRPC
Trigger: GCAAGGCCTATTTAATGTCAATCTGCTGTATGGTGA...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTGATAAGCTGCTGTACTaGACTTCGTATCAAGTCTAC +
Preference number: 5 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVDKLLY*TSYQVY
Trigger: GTAGACTTGATACGAAGTCAAGTACAGCAGCTTATC...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGATTCTCCTCTAAGATaGGGTCTGGGTTCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFDSPLR*GLGSGP
Trigger: TGGACCTGAACCCAGACCCAATCTTAGAGGAGAATC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TCTACCCTGCACACAGGAGTTAAGTTCTCTGACTCTCATTGCCCAGACTCAGGATCCTTTAAAAATGGGTaGAGGAGCATTTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: STLHTGVKFSDSHCPDSGSFKNG*RSICKV
Trigger: TACTTTGCAAATGCTCCTCAACCCATTTTTAAAGGA...TCCTGAGTCTGGGCAATGAGAGTCAGAGAACTTAACTCCTGTGTGCAGGGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGAAAATGTTGTCATACTaGAAACCTAGCTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRKMLSY*KPSLTK
Trigger: CTTGGTCAAGCTAGGTTTCAAGTATGACAACATTTT...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TCTAGTAGTTGGGAAAGGTTCTGTTGGAATTATATGCAAATGAAGGGGGCGAGCGAGACTGCTCCATGTTaGAGTACTTTTGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SSSWERFCWNYMQMKGASETAPC*STFERP
Trigger: TGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCTC...GCTCGCCCCCTTCATTTGCATATAATTCCAACAGAACCTTTCCCAACTACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATATGCTCTGGCTCTCCCTaGAGCATCAAGGTCAACAGT +
Preference number: 5 (lower is better)
Translates to: VSTSSIDDVANKMLLAIICSGSP*SIKVNS
Trigger: ACTGTTGACCTTGATGCTCAAGGGAGAGCCAGAGCA...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp ACTGCCATGTCCTCCTTTAGAAGGACTACAGTTTGGCTACTTGGTCTCTTCCGGTTCCAATTCTGTTTCTaGATTTTGAACTTCCTCACC +
Preference number: 5 (lower is better)
Translates to: TAMSSFRRTTVWLLGLFRFQFCF*ILNFLT
Trigger: GGTGAGGAAGTTCAAAATCAAGAAACAGAATTGGAA...CCGGAAGAGACCAAGTAGCCAAACTGTAGTCCTTCTAAAGGAGGACATGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTAAAGGCTGGAGTTTCTaGACGGCAGCTGGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSKGWSF*TAAGVC
Trigger: ACAGACACCAGCTGCCGTCAAGAAACTCCAGCCTTT...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACGGGGGTGGTGTCAGTTaGAAAGGCTGGAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNGGGVS*KGWSFL
Trigger: CAAGAAACTCCAGCCTTTCAAACTGACACCACCCCC...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCTACAGTTTGGCTACTaGGTCTCTTCCGGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNLQFGY*VSSGAD
Trigger: ATCTGCCCCGGAAGAGACCAAGTAGCCAAACTGTAG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAAGTTCCTTCCCAATTaGGACACTCAAGGGTATTCG +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLKFLPN*DTQGYS
Trigger: CGAATACCCTTGAGTGTCCAAATTGGGAAGGAACTT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS TCA 90 bp GGTTCAGGTCTCTTTCAAAAATATAGGTCACCATACCATCTTCAATaGCACGTCCTTTATCATCCAGCATGCCCTGAATTTCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: GSGLFQKYRSPYHLQ*HVLYHPACPEFHSL
Trigger: GAGGCTGTGAAATTCAGGGCATGCTGGATGATAAAGGACGTGTCATTGAAGATGGTATGGTGACCTATATTTTTGAAAGAGACCTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS GCA 90 bp TTCATCTTTGATGTGATCTCTGACATTGAGATTTATGGTAACATCTaGACGAACTCGGGTTGGCCAGTTTTCACCTATGTTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: FIFDVISDIEIYGNI*TNSGWPVFTYVGFG
Trigger: GCCAAACCCAACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTTACCATAAATCTCAATGTCAGAGATCACATCAAAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGATATGCCTGTTCTCTaGCTTCTGGATCCATCTTTT +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLDMPVL*LLDPSF
Trigger: AAAAGATGGATCCAGAAGCAAGAGAACAGGCATATC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCCAGAATAGTACTCAGTaGGGACAATATTTTCATCCC +
Preference number: 5 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITQNSTQ*GQYFHP
Trigger: GGGATGAAAATATTGTCCCAACTGAGTACTATTCTG...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATTCACCTATGTTGGGTTaGGCCACTTCAACGACAGTG +
Preference number: 5 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNSPMLG*ATSTTV
Trigger: CACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGA...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCAATAATGTGCACTACTaGGGTCCCCATAACCTAAAA +
Preference number: 5 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITNNVHY*GPHNLK
Trigger: TTTTAGGTTATGGGGACCCAAGTAGTGCACATTATT...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCCGTATTACGTTTGGGTaGATTATAAGGATAAGGACC +
Preference number: 5 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITRITFG*IIRIRT
Trigger: GGTCCTTATCCTTATAATCAACCCAAACGTAATACG...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATTGCTCTGGCTCTCCCTaGAGCATCAAGGTCAACAGT +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNCSGSP*SIKVNS
Trigger: ACTGTTGACCTTGATGCTCAAGGGAGAGCCAGAGCA...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCTGCTTCTTGCCCAGATaGATTTGGCAGAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCCFLPR*IWQSPP
Trigger: AGGAGGACTCTGCCAAATCAATCTGGGCAAGAAGCA...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAACAATATAGATGATTaGGGGGTGGGACAGTACAGA +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLNNIDD*GVGQYR
Trigger: TCTGTACTGTCCCACCCCCAAATCATCTATATTGTT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACTTTTTGAAGGAGTTTTaGCTCGTCGCCCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNFLKEF*LVAQAG
Trigger: TCCAGCCTGGGCGACGAGCAAAAACTCCTTCAAAAA...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAGATTCTCCTCTAAGATaGGGTCTGGGTTCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIDSPLR*GLGSGL
Trigger: GAGACCTGAACCCAGACCCAATCTTAGAGGAGAATC...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTTCTATCATAGTGAATaGTGGTCATCTCATTCTCTG +
Preference number: 5 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITFYHSE*WSSHSL
Trigger: CAGAGAATGAGATGACCACAATTCACTATGATAGAA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATTCACCTATGTTGGGTTaGGCCACTTCAACGACAGTG +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNSPMLG*ATSTTV
Trigger: CACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGA...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCAGTTTTCACCTATGTaGGGTTTGGCCACTTCAACG +
Preference number: 5 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNQFSPM*GLATST
Trigger: CGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GATGGCCCACTGCCCTGGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTTAGTATTGGTCATATCTaGTTGATACTGGTTTGGATC +
Preference number: 5 (lower is better)
Translates to: DGPLPWFVPEKEEYSHSVSIGHI*LILVWI
Trigger: GATCCAAACCAGTATCAACAAGATATGACCAATACT...AACAGAATGACTATATTCTTCTTTCTCTGGTACGAACCAGGGCAGTGGGCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCCGTATTACGTTTGGGTaGATTATAAGGATAAGGACC +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLRITFG*IIRIRT
Trigger: GGTCCTTATCCTTATAATCAACCCAAACGTAATACG...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTCCTTTAAAAATGGGTaGAGGAGCATTTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITSFKNG*RSICKV
Trigger: TACTTTGCAAATGCTCCTCAACCCATTTTTAAAGGA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAACAGTTCAAAACAGTTTaGGAAGAGGGATACTCTGGC +
Preference number: 5 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKQFKTV*EEGYSG
Trigger: GCCAGAGTATCCCTCTTCCAAAACTGTTTTGAACTG...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp GGCAATCTGATTGGGCATTTTCGAATAATGTGCACTACTTGGGTCCCCATAACCTGTTGTATACAAAGTTaGCCATCTGGGGCATATTTT +
Preference number: 5 (lower is better)
Translates to: GNLIGHFRIMCTTWVPITCCIQS*PSGAYF
Trigger: AAAATATGCCCCAGATGGCAAACTTTGTATACAACA...GGTTATGGGGACCCAAGTAGTGCACATTATTCGAAAATGCCCAATCAGATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTTCTGTTTCTTGATTTaGAACTTCCTCACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLFCFLI*NFLTLF
Trigger: GAAGAGGGTGAGGAAGTTCAAAATCAAGAAACAGAA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGGGTATGATGTCAGCTaGAACAGTCATGGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNGYDVS*NSHGLF
Trigger: GAAGAGGCCATGACTGTTCAAGCTGACATCATACCC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATTACCTGAAGGTCTCCTaGTGGCTGGTTATCCCAAGA +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNYLKVS*WLVIPR
Trigger: TCTTGGGATAACCAGCCACAAGGAGACCTTCAGGTA...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATAAAGGTGATTTCTTCTaGATGTGGGGAGCCCAGTAT +
Preference number: 5 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNKGDFF*MWGAQY
Trigger: ATACTGGGCTCCCCACATCAAGAAGAAATCACCTTT...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCTACTTCTGCCACATTaGAGAGGGCAAAATCATAGA +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFLLLPH*RGQNHR
Trigger: TCTATGATTTTGCCCTCTCAAATGTGGCAGAAGTAG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCAGTATTGGTCATATCTaGTTGATACTGGTTTGGATC +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSIGHI*LILVWI
Trigger: GATCCAAACCAGTATCAACAAGATATGACCAATACT...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCTCTTCCATCAAAATGTaGTCATACTTGAAACCTAGC +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLSSIKM*SYLKPS
Trigger: GCTAGGTTTCAAGTATGACAACATTTTGATGGAAGA...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACGAGACTGCTCCATGTTaGAGTACTTTTGAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNETAPC*STFERP
Trigger: TGGCCTTTCAAAAGTACTCAAACATGGAGCAGTCTC...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CCCAATTTGGACACTCAAGGGTATTCGTGGTTAAGTCCAGTATATTCTGTCCTCGTCATTCTGTTGACCTaGAAATCTATCAACAGTTGT +
Preference number: 5 (lower is better)
Translates to: PNLDTQGYSWLSPVYSVLVILLT*KSINSC
Trigger: ACAACTGTTGATAGATTTCAAGGTCAACAGAATGAC...GAGGACAGAATATACTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCTTTACTCAGACTTTTaGACTGCCATGTCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFLYSDF*TAMSSF
Trigger: AAAGGAGGACATGGCAGTCAAAAAGTCTGAGTAAAG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAACTTTACTCAGACTTTTaGACTGCCATGTCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKLYSDF*TAMSSF
Trigger: AAAGGAGGACATGGCAGTCAAAAAGTCTGAGTAAAG...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCCTTGCCCAGATTGATTaGGCAGAGTCCTCCTATTTA +
Preference number: 5 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCLAQID*AESSYL
Trigger: TAAATAGGAGGACTCTGCCAAATCAATCTGGGCAAG...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGTAAGCAGAGGTCCCTaGTCAGAAAACATTAGTCAC +
Preference number: 5 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCVSRGP*SENISH
Trigger: GTGACTAATGTTTTCTGACAAGGGACCTCTGCTTAC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGCCAGCTTATTTTGGTaGCAGGTATCATACCTCATA +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFASLFW*QVSYLI
Trigger: TATGAGGTATGATACCTGCAACCAAAATAAGCTGGC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS TCA 90 bp ATCTTGTTGATACTGGTTTGGATCCAAAAACACTCTAAATGTCCTTaGTTCTCCTCTAAGATTGGGTCTGGGTTCAGGTCCATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: ILLILVWIQKHSKCP*FSSKIGSGFRSIFN
Trigger: ATTGAAGATGGACCTGAACCCAGACCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTGTTTTTGGATCCAAACCAGTATCAACAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS GCA 90 bp GGTGATTTCTTCTTGATGTGGGGAGCCCAGTATTTACATGCTAACTaGAAAGTAAACAGTATAAACAGTAAGTCCCAGATTCTTGCCATT +
Preference number: 5 (lower is better)
Translates to: GDFFLMWGAQYLHAN*KVNSINSKSQILAI
Trigger: AATGGCAAGAATCTGGGACTTACTGTTTATACTGTTTACTTTGCAGTTAGCATGTAAATACTGGGCTCCCCACATCAAGAAGAAATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558202.1
ENST00000560117.1
CDS CCA 90 bp ATATCTTCAATAACCTTTATATCAAAAGGTGATTTCTTCTTGATGTaGGGAGCCCAGTATTTACATGCTAACTGGGTCACGAACTCCGCA +
Preference number: 5 (lower is better)
Translates to: ISSITFISKGDFFLM*GAQYLHANWVTNSA
Trigger: TGCGGAGTTCGTGACCCAGTTAGCATGTAAATACTGGGCTCCCCACATCAAGAAGAAATCACCTTTTGATATAAAGGTTATTGAAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS-3UTR CAA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCTCACCATACAGCAGATaGACATTAAATAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCSPYSR*TLNRPC
Trigger: GCAAGGCCTATTTAATGTCAATCTGCTGTATGGTGA...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACGATAAGCTGCTGTACTaGACTTCGTATCAAGTCTAC +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNDKLLY*TSYQVY
Trigger: GTAGACTTGATACGAAGTCAAGTACAGCAGCTTATC...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTGGCTTCTTTCACTAAAAGGTATTTAGATCTGTCCAGTCCACTTCGAAGCAATCTACTTCTGCCACATTaGAGAGGGCAAAATCATAGA +
Preference number: 5 (lower is better)
Translates to: LASFTKRYLDLSSPLRSNLLLPH*RGQNHR
Trigger: TCTATGATTTTGCCCTCTCAAATGTGGCAGAAGTAG...ATTGCTTCGAAGTGGACTGGACAGATCTAAATACCTTTTAGTGAAAGAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCTGGGTTGAGGAGCATTaGCAAAGTATTCATGGAAAG +
Preference number: 5 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCWVEEH*QSIHGK
Trigger: CTTTCCATGAATACTTTGCAAATGCTCCTCAACCCA...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTTACTTGAAACCTAGCTaGACCAAGTCATGTCGTTTT +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFYLKPS*TKSCRF
Trigger: AAAACGACATGACTTGGTCAAGCTAGGTTTCAAGTA...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTCTTCCAATCAATGGATaGTTTCCACATCGTCTATTG +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFLPING*FPHRLL
Trigger: CAATAGACGATGTGGAAACAATCCATTGATTGGAAG...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAATTCTGTTTCTTGATTTaGAACTTCCTCACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKFCFLI*NFLTLF
Trigger: GAAGAGGGTGAGGAAGTTCAAAATCAAGAAACAGAA...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTGGTAGTGTGCAGTTCTaGCTTGTTTCTTCAAAGATT +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFGSVQF*LVSSKI
Trigger: AATCTTTGAAGAAACAAGCAAGAACTGCACACTACC...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACAACAGGCTATCTGGCTaGATCCTTACTCTGATAACA +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNNRLSG*ILTLIT
Trigger: TGTTATCAGAGTAAGGATCAAGCCAGATAGCCTGTT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS TCA 90 bp ATCTTGTTGATACTGGTTTGGATCCAAAAACACTCTAAATGTCCTTaGTTCTCCTCTAAGATTGGGTCTGGGTTCAGGTCTCTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: ILLILVWIQKHSKCP*FSSKIGSGFRSLSK
Trigger: TTTTGAAAGAGACCTGAACCCAGACCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTGTTTTTGGATCCAAACCAGTATCAACAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATGATATGCCTGTTCTCTaGCTTCTGGATCCATCTTTT +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNDMPVL*LLDPSF
Trigger: AAAAGATGGATCCAGAAGCAAGAGAACAGGCATATC...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTTTCTATCATAGTGAATaGTGGTCATCTCATTCTCTG +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFFYHSE*WSSHSL
Trigger: CAGAGAATGAGATGACCACAATTCACTATGATAGAA...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACCAGAATAGTACTCAGTaGGGACAATATTTTCATCCC +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNQNSTQ*GQYFHP
Trigger: GGGATGAAAATATTGTCCCAACTGAGTACTATTCTG...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATAGACGAATTTCATAAGTaGATTCTAAGCGGAAGAGGT +
Preference number: 5 (lower is better)
Translates to: VSTSSIDDVANKMLLAIIDEFHK*ILSGRG
Trigger: ACCTCTTCCGCTTAGAATCAACTTATGAAATTCGTC...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTATTGGTCATATCTTGTaGATACTGGTTTGGATCCAA +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFIGHIL*ILVWIQ
Trigger: TTGGATCCAAACCAGTATCAACAAGATATGACCAAT...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTAGCTTCCCTACTTCAAGTAACCAAGGGTCAGAAGACTGAAGGTACTACAAAAATTGGTCATATCTTGTaGATACTGGTTTGGATCCAA +
Preference number: 5 (lower is better)
Translates to: LASLLQVTKGQKTEGTTKIGHIL*ILVWIQ
Trigger: TTGGATCCAAACCAGTATCAACAAGATATGACCAAT...TTTTGTAGTACCTTCAGTCTTCTGACCCTTGGTTACTTGAAGTAGGGAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp ACATTAATGAGCTGGAAGTCATACAGTAAGCCAGCATTTGCTGTACTAAACTCTTACTTGAAACCTAGCTaGACCAAGTCATGTCGTTTT +
Preference number: 5 (lower is better)
Translates to: TLMSWKSYSKPAFAVLNSYLKPS*TKSCRF
Trigger: AAAACGACATGACTTGGTCAAGCTAGGTTTCAAGTA...AGAGTTTAGTACAGCAAATGCTGGCTTACTGTATGACTTCCAGCTCATTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATCAGTTGTCACCTTGTTaGGTCTTCCAATCAATGGAT +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNQLSPC*VFQSMD
Trigger: ATCCATTGATTGGAAGACCAAACAAGGTGACAACTG...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACTCAACAGTTGTCACCTaGTTTGGTCTTCCAATCAAT +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNSTVVT*FGLPIN
Trigger: ATTGATTGGAAGACCAAACAAGGTGACAACTGTTGA...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATATCAACAGTTGTCACCTaGTTTGGTCTTCCAATCAAT +
Preference number: 5 (lower is better)
Translates to: VSTSSIDDVANKMLLAIISTVVT*FGLPIN
Trigger: ATTGATTGGAAGACCAAACAAGGTGACAACTGTTGA...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCGAAATCTATCAACAGTaGTCACCTTGTTTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCEIYQQ*SPCLVF
Trigger: GAAGACCAAACAAGGTGACAACTGTTGATAGATTTC...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp CTTACTCTGATAACAAATAGACCTGGGTTTCCTAGTATCGCGTCCTTGGTATTTTTCCAATTCTGTTTCTaGATTTTGAACTTCCTCACC +
Preference number: 5 (lower is better)
Translates to: LTLITNRPGFPSIASLVFFQFCF*ILNFLT
Trigger: GGTGAGGAAGTTCAAAATCAAGAAACAGAATTGGAA...AAATACCAAGGACGCGATACTAGGAAACCCAGGTCTATTTGTTATCAGAGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCTTAGATTTAATAGGTTaGGAGCAGAGCCCAAACTTC +
Preference number: 5 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCLDLIG*EQSPNF
Trigger: GAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAA...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACAATCACCTGGGGACTTaGTTGCAATGTAGATTTAGA +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNNHLGT*LQCRFR
Trigger: TCTAAATCTACATTGCAACAAAGTCCCCAGGTGATT...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp GTTTCCACATCGTCTATTGATGATGTCGCGAATAAGATGCTTTTGGCCATTATATCTTCCATCAAAATGTaGTCATACTTGAAACCTAGC +
Preference number: 5 (lower is better)
Translates to: VSTSSIDDVANKMLLAIISSIKM*SYLKPS
Trigger: GCTAGGTTTCAAGTATGACAACATTTTGATGGAAGA...TATAATGGCCAAAAGCATCTTATTCGCGACATCATCAATAGACGATGTGGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS-3UTR CAA 90 bp TATTCAACACAGCCTGGTAGAGCTGAGCAAACACTAGTCACTCAAAAATATAACGTCATTCTGTTGACCTaGAAATCTATCAACAGTTGT +
Preference number: 5 (lower is better)
Translates to: YSTQPGRAEQTLVTQKYNVILLT*KSINSC
Trigger: ACAACTGTTGATAGATTTCAAGGTCAACAGAATGAC...GTTATATTTTTGAGTGACTAGTGTTTGCTCAGCTCTACCAGGCTGTGTTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TGTTGCAATGTAGATTTAGATTTAATAGGTTTGGAGCAGAGCCCAAACTTCTGCCCAACTTTGGGAGTCTaGATGATGTTTAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: CCNVDLDLIGLEQSPNFCPTLGV*MMFKSS
Trigger: AGAAGATTTAAACATCATCAAGACTCCCAAAGTTGG...GCAGAAGTTTGGGCTCTGCTCCAAACCTATTAAATCTAAATCTACATTGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATAAAATGTTGTCATACTaGAAACCTAGCTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNKMLSY*KPSLTK
Trigger: CTTGGTCAAGCTAGGTTTCAAGTATGACAACATTTT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS-3UTR CAA 90 bp TTTGTCTCTAAGAAGAAAAACTGGAGCGTCCAAAGCTTCTGGATTCCATTTAATAACTTCAATACGATGTaGATGCTGTTGGTTCACAAA +
Preference number: 5 (lower is better)
Translates to: FVSKKKNWSVQSFWIPFNNFNTM*MLLVHK
Trigger: TTTGTGAACCAACAGCATCAACATCGTATTGAAGTT...ATTAAATGGAATCCAGAAGCTTTGGACGCTCCAGTTTTTCTTCTTAGAGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS CCA 72 bp GGGGCTGCCATGGCAGCACTCTTCCCTCCACTCCAGTaGAAACTAAAGGACCGCTCTGGGCAGCGGCAACCC +
Preference number: 6 (lower is better)
Translates to: GAAMAALFPPLQ*KLKDRSGQRQP
Trigger: GGGTTGCCGCTGCCCAGAGCGGTCCTTTAGTTTCCACTGGAGTGGAGGGAAGAGTGCTGCCATGGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CAA 90 bp ACGAACTCCGCATTGATTTGGGACACCGTAGGGGCCACGATCTTCTaGGGCTGCGCAGGGGCTGCCATGGCAGCACTCTTCCCTCCACTC +
Preference number: 6 (lower is better)
Translates to: TNSALIWDTVGATIF*GCAGAAMAALFPPL
Trigger: GAGTGGAGGGAAGAGTGCTGCCATGGCAGCCCCTGCGCAGCCCAAGAAGATCGTGGCCCCTACGGTGTCCCAAATCAATGCGGAGTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CCA 72 bp TGGAAACTAAAGGACCGCTCTGGGCAGCGGCAACCCTaGTCCACTTCCCTTAAGTTACTGCCGGGGCGCTTA +
Preference number: 6 (lower is better)
Translates to: WKLKDRSGQRQP*STSLKLLPGRL
Trigger: TAAGCGCCCCGGCAGTAACTTAAGGGAAGTGGACCAGGGTTGCCGCTGCCCAGAGCGGTCCTTTAGTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CCA 72 bp TTGGCCACTTCAACGACAGTGAAAGCCACAATGGGCTaGGCCATTCGCGCCCAACCACCAAACACTACACCG +
Preference number: 6 (lower is better)
Translates to: LATSTTVKATMG*AIRAQPPNTTP
Trigger: CGGTGTAGTGTTTGGTGGTTGGGCGCGAATGGCCCAGCCCATTGTGGCTTTCACTGTCGTTGAAGTGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS TCA 72 bp TTTCACCTATGTTGGGTTTGGCCACTTCAACGACAGTaGAAGCCACAATGGGCTGGGCCATTCGCGCCCAAC +
Preference number: 6 (lower is better)
Translates to: FHLCWVWPLQRQ*KPQWAGPFAPN
Trigger: GTTGGGCGCGAATGGCCCAGCCCATTGTGGCTTTCACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CCA 72 bp TTACATGCTAACTGGGTCACGAACTCCGCATTGATTTaGGACACCGTAGGGGCCACGATCTTCTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LHANWVTNSALI*DTVGATIFLGC
Trigger: GCAGCCCAAGAAGATCGTGGCCCCTACGGTGTCCCAAATCAATGCGGAGTTCGTGACCCAGTTAGCATGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CAA 72 bp GTTGTAGAGGTTGCACAAGCTTGCTCTGGCTCTCCCTaGAGCATCAAGGTCAACAGTCGGAACTCCAACGCG +
Preference number: 6 (lower is better)
Translates to: VVEVAQACSGSP*SIKVNSRNSNA
Trigger: CGCGTTGGAGTTCCGACTGTTGACCTTGATGCTCAAGGGAGAGCCAGAGCAAGCTTGTGCAACCTCTACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS CAA 72 bp CGAACTCGGGTTGGCCAGTTTTCACCTATGTTGGGTTaGGCCACTTCAACGACAGTGAAAGCCACAATGGGC +
Preference number: 6 (lower is better)
Translates to: RTRVGQFSPMLG*ATSTTVKATMG
Trigger: GCCCATTGTGGCTTTCACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTGGCCAACCCGAGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CAA 90 bp ACATCTGCACGAACTCGGGTTGGCCAGTTTTCACCTATGTTGGGTTaGGCCACTTCAACGACAGTGAAAGCCACAATGGGCTGGGCCATT +
Preference number: 6 (lower is better)
Translates to: TSARTRVGQFSPMLG*ATSTTVKATMGWAI
Trigger: AATGGCCCAGCCCATTGTGGCTTTCACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CAA 90 bp ATGGTAACATCTGCACGAACTCGGGTTGGCCAGTTTTCACCTATGTaGGGTTTGGCCACTTCAACGACAGTGAAAGCCACAATGGGCTGG +
Preference number: 6 (lower is better)
Translates to: MVTSARTRVGQFSPM*GLATSTTVKATMGW
Trigger: CCAGCCCATTGTGGCTTTCACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CAA 72 bp TCTGCACGAACTCGGGTTGGCCAGTTTTCACCTATGTaGGGTTTGGCCACTTCAACGACAGTGAAAGCCACA +
Preference number: 6 (lower is better)
Translates to: SARTRVGQFSPM*GLATSTTVKAT
Trigger: TGTGGCTTTCACTGTCGTTGAAGTGGCCAAACCCAACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS TCA 72 bp GTGTGGATATTATACCTGGGAATTCTGTTGCCACTCTaGCCATGTGGAGAACTGGGCTCACATGCTGACATT +
Preference number: 6 (lower is better)
Translates to: VWILYLGILLPL*PCGELGSHADI
Trigger: AATGTCAGCATGTGAGCCCAGTTCTCCACATGGTCAGAGTGGCAACAGAATTCCCAGGTATAATATCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS TCA 72 bp GACCAAGGACTCCCGAGTATCTACTTCTGCCACATTTaGGAGGGCAAAATCATAGAGTTCAGGAAAATGTGC +
Preference number: 6 (lower is better)
Translates to: DQGLPSIYFCHI*EGKIIEFRKMC
Trigger: GCACATTTTCCTGAACTCTATGATTTTGCCCTCTCAAATGTGGCAGAAGTAGATACTCGGGAGTCCTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS GCA 72 bp GTTGTTATGTGTGGATATTATACCTGGGAATTCTGTTaGCACTCTGACCATGTGGAGAACTGGGCTCACATG +
Preference number: 6 (lower is better)
Translates to: VVMCGYYTWEFC*HSDHVENWAHM
Trigger: CATGTGAGCCCAGTTCTCCACATGGTCAGAGTGGCAACAGAATTCCCAGGTATAATATCCACACATAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS CCA 72 bp ATTGAGATTTATGGTAACATCTGCACGAACTCGGGTTaGCCAGTTTTCACCTATGTTGGGTTTGGCCACTTC +
Preference number: 6 (lower is better)
Translates to: IEIYGNICTNSG*PVFTYVGFGHF
Trigger: GAAGTGGCCAAACCCAACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTTACCATAAATCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS TCA 72 bp CCCATCCACATTGGGAGGGAGATAAGCTGCTGTACTTaGCTTCGTATCAAGTCTACTTCCAAACTATTGAAG +
Preference number: 6 (lower is better)
Translates to: PIHIGREISCCT*LRIKSTSKLLK
Trigger: CTTCAATAGTTTGGAAGTAGACTTGATACGAAGTCAAGTACAGCAGCTTATCTCCCTCCCAATGTGGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CAA 72 bp GCCCATCCACATTGGGAGGGAGATAAGCTGCTGTACTaGACTTCGTATCAAGTCTACTTCCAAACTATTGAA +
Preference number: 6 (lower is better)
Translates to: AHPHWEGDKLLY*TSYQVYFQTIE
Trigger: TTCAATAGTTTGGAAGTAGACTTGATACGAAGTCAAGTACAGCAGCTTATCTCCCTCCCAATGTGGATGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS TCA 72 bp CACCGCCATATTCAGATTGCCATGGCTTCATTCTGCTaGCACTATCTTCAATGTCCTGACGAATTTCATAAG +
Preference number: 6 (lower is better)
Translates to: HRHIQIAMASFC*HYLQCPDEFHK
Trigger: CTTATGAAATTCGTCAGGACATTGAAGATAGTGTCAGCAGAATGAAGCCATGGCAATCTGAATATGGCGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS TCA 72 bp ATACTGGTTTGGATCCAAAAACACTCTAAATGTCCTTaGTTCTCCTCTAAGATTGGGTCTGGGTTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: ILVWIQKHSKCP*FSSKIGSGFRS
Trigger: GGACCTGAACCCAGACCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTGTTTTTGGATCCAAACCAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS GCA 72 bp GATGTGATCTCTGACATTGAGATTTATGGTAACATCTaGACGAACTCGGGTTGGCCAGTTTTCACCTATGTT +
Preference number: 6 (lower is better)
Translates to: DVISDIEIYGNI*TNSGWPVFTYV
Trigger: AACATAGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTTACCATAAATCTCAATGTCAGAGATCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CAA 90 bp TTAGCAGGGCAGAATAACATCGTTGAGCTACCCTGTAACCCAACCTaGGAACCACCCTATTTCCATCTTGTTATGAGAGAAAGTAACTTT +
Preference number: 6 (lower is better)
Translates to: LAGQNNIVELPCNPT*EPPYFHLVMRESNF
Trigger: AAAGTTACTTTCTCTCATAACAAGATGGAAATAGGGTGGTTCCAAGGTTGGGTTACAGGGTAGCTCAACGATGTTATTCTGCCCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS TCA 72 bp AACTTTGTCCATAGTGACAGGTTCAGAAAGTGGGACTaGTTTCAGCACAGAGATAAACTTCTGGATGAGTTG +
Preference number: 6 (lower is better)
Translates to: NFVHSDRFRKWD*FQHRDKLLDEL
Trigger: CAACTCATCCAGAAGTTTATCTCTGTGCTGAAATCAGTCCCACTTTCTGAACCTGTCACTATGGACAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS TCA 72 bp ATACTGGTTTGGATCCAAAAACACTCTAAATGTCCTTaGTTCTCCTCTAAGATTGGGTCTGGGTTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: ILVWIQKHSKCP*FSSKIGSGFRS
Trigger: AGACCTGAACCCAGACCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTGTTTTTGGATCCAAACCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS TCA 72 bp ATAAGTAAGTTTCTTAGATTAGCTATGTGGGAGACATaGAGATGGGGTGAGCAAGGCTGTTTTCTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: ISKFLRLAMWET*RWGEQGCFLKA
Trigger: AGCCTTCAGAAAACAGCCTTGCTCACCCCATCTTCATGTCTCCCACATAGCTAATCTAAGAAACTTACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS CAA 72 bp AAAAACACTCTAAATGTCCTTGATTCTCCTCTAAGATaGGGTCTGGGTTCAGGTCCATCTTCAATGACACGT +
Preference number: 6 (lower is better)
Translates to: KNTLNVLDSPLR*GLGSGPSSMTR
Trigger: ACGTGTCATTGAAGATGGACCTGAACCCAGACCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000156471.10
CDS CAA 90 bp CCCCAGCAATGTGTAAACTCTAGAACCCCAGTTCTAGAGTTTCAGTaGTTGTACATCCTTGCCAACATTTGTCATAATGTCAATCTTCAT +
Preference number: 6 (lower is better)
Translates to: PQQCVNSRTPVLEFQ*LYILANICHNVNLH
Trigger: ATGAAGATTGACATTATGACAAATGTTGGCAAGGATGTACAACAACTGAAACTCTAGAACTGGGGTTCTAGAGTTTACACATTGCTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS CCA 72 bp ATAACCTTTATATCAAAAGGTGATTTCTTCTTGATGTaGGGAGCCCAGTATTTACATGCTAACTGGGTCACG +
Preference number: 6 (lower is better)
Translates to: ITFISKGDFFLM*GAQYLHANWVT
Trigger: CGTGACCCAGTTAGCATGTAAATACTGGGCTCCCCACATCAAGAAGAAATCACCTTTTGATATAAAGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CCA 72 bp ACAACTAATGATGGTAAGCACTTTTTCATGACGTATTaGCTACCTGTAGGTCTTCCTTATGTGAAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: TTNDGKHFFMTY*LPVGLPYVKCL
Trigger: CAGACACTTCACATAAGGAAGACCTACAGGTAGCCAATACGTCATGAAAAAGTGCTTACCATCATTAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS TCA 72 bp TCATGCTTACGAAGACCTTCCCATTCATCTTTGATGTaGTCTCTGACATTGAGATTTATGGTAACATCTGCA +
Preference number: 6 (lower is better)
Translates to: SCLRRPSHSSLM*SLTLRFMVTSA
Trigger: TGCAGATGTTACCATAAATCTCAATGTCAGAGATCACATCAAAGATGAATGGGAAGGTCTTCGTAAGCATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS TCA 72 bp CTCTTTCAAAAATATAGGTCACCATACCATCTTCAATaGCACGTCCTTTATCATCCAGCATGCCCTGAATTT +
Preference number: 6 (lower is better)
Translates to: LFQKYRSPYHLQ*HVLYHPACPEF
Trigger: AAATTCAGGGCATGCTGGATGATAAAGGACGTGTCATTGAAGATGGTATGGTGACCTATATTTTTGAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS CAA 72 bp TGTGTAAACTCTAGAACCCCAGTTCTAGAGTTTCAGTaGTTGTACATCCTTGCCAACATTTGTCATAATGTC +
Preference number: 6 (lower is better)
Translates to: CVNSRTPVLEFQ*LYILANICHNV
Trigger: GACATTATGACAAATGTTGGCAAGGATGTACAACAACTGAAACTCTAGAACTGGGGTTCTAGAGTTTACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS CAA 90 bp CAGCAATGTGTAAACTCTAGAACCCCAGTTCTAGAGTTTCAGTTGTaGTACATCCTTGCCAACATTTGTCATAATGTCAATCTTCATCAT +
Preference number: 6 (lower is better)
Translates to: QQCVNSRTPVLEFQL*YILANICHNVNLHH
Trigger: ATGATGAAGATTGACATTATGACAAATGTTGGCAAGGATGTACAACAACTGAAACTCTAGAACTGGGGTTCTAGAGTTTACACATTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS CAA 72 bp TCTTCAATAACCTTTATATCAAAAGGTGATTTCTTCTaGATGTGGGGAGCCCAGTATTTACATGCTAACTGG +
Preference number: 6 (lower is better)
Translates to: SSITFISKGDFF*MWGAQYLHANW
Trigger: CCAGTTAGCATGTAAATACTGGGCTCCCCACATCAAGAAGAAATCACCTTTTGATATAAAGGTTATTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156471.10
ENST00000543879.6
CDS CAA 72 bp AAAAACACTCTAAATGTCCTTGATTCTCCTCTAAGATaGGGTCTGGGTTCAGGTCTCTTTCAAAAATATAGG +
Preference number: 6 (lower is better)
Translates to: KNTLNVLDSPLR*GLGSGLFQKYR
Trigger: CCTATATTTTTGAAAGAGACCTGAACCCAGACCCAATCTTAGAGGAGAATCAAGGACATTTAGAGTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543879.6
CDS CAA 72 bp GTAAACTCTAGAACCCCAGTTCTAGAGTTTCAGTTGTaGTACATCCTTGCCAACATTTGTCATAATGTCAAT +
Preference number: 6 (lower is better)
Translates to: VNSRTPVLEFQL*YILANICHNVN
Trigger: ATTGACATTATGACAAATGTTGGCAAGGATGTACAACAACTGAAACTCTAGAACTGGGGTTCTAGAGTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS CAA 72 bp GGTTCGTACCAGAGAAAGAAGAATATAGTCATTCTGTaGACCTTGAAATCTATCAACAGTTGTCACCTAGAA +
Preference number: 6 (lower is better)
Translates to: GSYQRKKNIVIL*TLKSINSCHLE
Trigger: TTCTAGGTGACAACTGTTGATAGATTTCAAGGTCAACAGAATGACTATATTCTTCTTTCTCTGGTACGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS CAA 72 bp TCTTCAATAACCTTTATATCAAAAGGTGATTTCTTCTaGATGTGGGGAGCCCAGTATTTACATGCTAACTGC +
Preference number: 6 (lower is better)
Translates to: SSITFISKGDFF*MWGAQYLHANC
Trigger: GCAGTTAGCATGTAAATACTGGGCTCCCCACATCAAGAAGAAATCACCTTTTGATATAAAGGTTATTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558202.1
ENST00000560117.1
CDS CAA 90 bp GTGGACATGTTTTCATTGCTCTTGAATAAATATGCAGGAGTGAAATaGCTGAGCTGTACAGTAAGTGCATACTTTATAAGAAACTGTCAA +
Preference number: 6 (lower is better)
Translates to: VDMFSLLLNKYAGVK*LSCTVSAYFIRNCQ
Trigger: TTGACAGTTTCTTATAAAGTATGCACTTACTGTACAGCTCAGCAATTTCACTCCTGCATATTTATTCAAGAGCAATGAAAACATGTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS GCA 72 bp AGGTCTTCCTTATGTGAAGTGTCTGTTCAAGTCATTTaGCCATTTTGTATTGGTCTGCCTTATTTAGTAATA +
Preference number: 6 (lower is better)
Translates to: RSSLCEVSVQVI*PFCIGLPYLVI
Trigger: TATTACTAAATAAGGCAGACCAATACAAAATGGGCAAATGACTTGAACAGACACTTCACATAAGGAAGACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559090.5
CDS CCA 72 bp ATAACCTTTATATCAAAAGGTGATTTCTTCTTGATGTaGGGAGCCCAGTATTTACATGCTAACTGCAAAGTA +
Preference number: 6 (lower is better)
Translates to: ITFISKGDFFLM*GAQYLHANCKV
Trigger: TACTTTGCAGTTAGCATGTAAATACTGGGCTCCCCACATCAAGAAGAAATCACCTTTTGATATAAAGGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558202.1
ENST00000560117.1
CDS CAA 72 bp TTGAGTATTCTTTCACTGAACAAATATACCACAGTTTaGTCCACTCACCTTTTCATGAAAAGTTGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LSILSLNKYTTV*STHLFMKSWPV
Trigger: AACAGGCCAACTTTTCATGAAAAGGTGAGTGGACAAAACTGTGGTATATTTGTTCAGTGAAAGAATACTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559090.5