RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AQP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167580

Ensembl transcript IDs: ENST00000199280.4, ENST00000550862.1, ENST00000551526.5

Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCAGCGCTGCAGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTaGGGCTGGAAATCAAGGCCCTCCCTTCAGCCCTCTCAAAGTGGC +
Preference number: 1 (lower is better)
Translates to: GPALQVGEIFQEEPD*GWKSRPSLQPSQSG
Trigger: GCCACTTTGAGAGGGCTGAAGGGAGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCTGCAGCGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 90 bp TCCCTTCAGCCCTCTCAAAGTGGCCTCCTTCCCTTCCCCTTCTCCTaGGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAAGCGGA +
Preference number: 1 (lower is better)
Translates to: SLQPSQSGLLPFPFS*GGLAPTLIHCRRSG
Trigger: TCCGCTTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGGGAAGGAGGCCACTTTGAGAGGGCTGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 90 bp TTTGTCCTCTCTACCCTGCTGCCCTCGCCAAGGCTCTCCGTCCACTaGAAGACAGTGGGTTGGGCTGGAAAGGCCCAGCCATGTGTTCTG +
Preference number: 1 (lower is better)
Translates to: FVLSTLLPSPRLSVH*KTVGWAGKAQPCVL
Trigger: CAGAACACATGGCTGGGCCTTTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 90 bp AGACGGGGGTCCCGGGCACACACAGCATACACACACGTGAAGGCGTaGGCACTCATATGCCTGCTTCCTCTTTGGAGAGGTTCTCCCTCA +
Preference number: 1 (lower is better)
Translates to: RRGSRAHTAYTHVKA*ALICLLPLWRGSPS
Trigger: TGAGGGAGAACCTCTCCAAAGAGGAAGCAGGCATATGAGTGCGCACGCCTTCACGTGTGTGTATGCTGTGTGTGCCCGGGACCCCCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 90 bp AAAGGGCAGAAACCAGCCCCACATTCTTTGTCCTCTCTACCCTGCTaGCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGG +
Preference number: 1 (lower is better)
Translates to: KGQKPAPHSLSSLPC*PRQGSPSTARQWVG
Trigger: CCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTGGTTTCTGCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 90 bp GCGCTGCAGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTGCGGCTaGAAATCAAGGCCCTCCCTTCAGCCCTCTCAAAGTGGCCTCCTT +
Preference number: 1 (lower is better)
Translates to: ALQVGEIFQEEPDCG*KSRPSLQPSQSGLL
Trigger: AAGGAGGCCACTTTGAGAGGGCTGAAGGGAGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCTGCAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 90 bp CTGGTTGACACCTCTCTACCTCCAGCAATGAGTCTTGGCAAGCCTTaGGGCCCAGCGCTGCAGGTGGGGGAAATTTTCCAGGAGGAGCCA +
Preference number: 1 (lower is better)
Translates to: LVDTSLPPAMSLGKP*GPALQVGEIFQEEP
Trigger: TGGCTCCTCCTGGAAAATTTCCCCCACCTGCAGCGCTGGGCCCCAAGGCTTGCCAAGACTCATTGCTGGAGGTAGAGAGGTGTCAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 90 bp CATGGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGTaGTGGGCAAGAGGGCTCACTTGTGAAACTGAGTGTCTCCTTTCA +
Preference number: 1 (lower is better)
Translates to: HGCMPERLAQPAIGV*WARGLTCETECLLS
Trigger: TGAAAGGAGACACTCAGTTTCACAAGTGAGCCCTCTTGCCCAGCACACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 90 bp GGGATGAGGTGCCTGAGACACATCCATGCTGGGCTCATAGCTCACTaGCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCC +
Preference number: 1 (lower is better)
Translates to: GMRCLRHIHAGLIAH*LAAFEPLEQGHSGA
Trigger: GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGGCACCTCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR GCA 90 bp CTTAAAGGGCAGAAACCAGCCCCACATTCTTTGTCCTCTCTACCCTaGTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTT +
Preference number: 1 (lower is better)
Translates to: LKGQKPAPHSLSSLP*CPRQGSPSTARQWV
Trigger: AACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTGGTTTCTGCCCTTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 90 bp GGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGTGCTaGGCAAGAGGGCTCACTTGTGAAACTGAGTGTCTCCTTTCAAGA +
Preference number: 1 (lower is better)
Translates to: GCMPERLAQPAIGVC*ARGLTCETECLLSR
Trigger: TCTTGAAAGGAGACACTCAGTTTCACAAGTGAGCCCTCTTGCCCAGCACACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 90 bp ACCTGGAGGTCTGTCTACCTGTCTCCATGCTGCCCTGCCTCTGTCTaGTTTGGTGTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTC +
Preference number: 1 (lower is better)
Translates to: TWRSVYLSPCCPASV*FGVCDLCSLTDRVL
Trigger: GAGCACCCGGTCAGTCAGAGAACAGAGATCACACACACCAAACCAGACAGAGGCAGGGCAGCATGGAGACAGGTAGACAGACCTCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 90 bp GCCTGGAGAAGTCATTTCCCTTCTCTGGTCCTGAGAGCAGCAGGCTaGTCTATCCACAATGACTGTCCAGTGGTAGGAGCCAGAAGCAGG +
Preference number: 1 (lower is better)
Translates to: AWRSHFPSLVLRAAG*SIHNDCPVVGARSR
Trigger: CCTGCTTCTGGCTCCTACCACTGGACAGTCATTGTGGATAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGAAATGACTTCTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 90 bp GAAGATCAGATAAGTCCGTGCATGCAAGGCACCCAGCACAGCAGCTaGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCACCCCT +
Preference number: 1 (lower is better)
Translates to: EDQISPCMQGTQHSS*YTRDARNCQFPSTP
Trigger: AGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCCTTGCATGCACGGACTTATCTGATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR TCA 90 bp ATTTCCTTTTTCCAGAGGCCATGTCTAGGGGAGCTGTTCTCTGGTTaGCACCTCTCTACCTCCAGCAATGAGTCTTGGCAAGCCTTGGGG +
Preference number: 1 (lower is better)
Translates to: ISFFQRPCLGELFSG*HLSTSSNESWQALG
Trigger: CCCCAAGGCTTGCCAAGACTCATTGCTGGAGGTAGAGAGGTGTCAACCAGAGAACAGCTCCCCTAGACATGGCCTCTGGAAAAAGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 90 bp CTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTaGGGAAGATCAGATAAGTCCGTGCATGCAAGGCACCCAGCACAG +
Preference number: 1 (lower is better)
Translates to: LHGWGPLSFPNLSEV*GRSDKSVHARHPAQ
Trigger: CTGTGCTGGGTGCCTTGCATGCACGGACTTATCTGATCTTCCTCAAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR GCA 90 bp GGCTCACTTGTGAAACTGAGTGTCTCCTTTCAAGAAGTGTCTAGGTaGAAATCTCCCCTCACCCAAGACAAAGGCCCGGGTCCCACAAAG +
Preference number: 1 (lower is better)
Translates to: GSLVKLSVSFQEVSR*KSPLTQDKGPGPTK
Trigger: CTTTGTGGGACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAGACACTTCTTGAAAGGAGACACTCAGTTTCACAAGTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 90 bp TACACACACGTGAAGGCGTGCGCACTCATATGCCTGCTTCCTCTTTaGAGAGGTTCTCCCTCACCACAGAAAGGAAATCTTTGGCCACCA +
Preference number: 1 (lower is better)
Translates to: YTHVKACALICLLPL*RGSPSPQKGNLWPP
Trigger: TGGTGGCCAAAGATTTCCTTTCTGTGGTGAGGGAGAACCTCTCCAAAGAGGAAGCAGGCATATGAGTGCGCACGCCTTCACGTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 90 bp GACTCTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTaGGCATCAGACTCCTTCTGCATCCTTCCCCCAGGAAGCAGAAAT +
Preference number: 1 (lower is better)
Translates to: DSPLLWPSTKGGKGC*ASDSFCILPPGSRN
Trigger: ATTTCTGCTTCCTGGGGGAAGGATGCAGAAGGAGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 90 bp CATTGTATATATACAACATCACAGCTTAAAGATACAAAACGACATTaGAGCACCATTTGCAGGTGCAAAGTCATTTGGCACAAAGTGGGA +
Preference number: 1 (lower is better)
Translates to: HCIYTTSQLKDTKRH*STICRCKVIWHKVG
Trigger: TCCCACTTTGTGCCAAATGACTTTGCACCTGCAAATGGTGCTTCAATGTCGTTTTGTATCTTTAAGCTGTGATGTTGTATATATACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp TGCTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGGCTGGAACCCTTCCCCTTCTCCTaGGGAGGACTGGCACCCACA +
Preference number: 2 (lower is better)
Translates to: CCPRQGSPSTARQWVGLEPFPFS*GGLAPT
Trigger: TGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGGG...TTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp TGCTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGGCTGGAACCTGGTGCCCATGGTTaGATGCCTGAGCGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: CCPRQGSPSTARQWVGLEPGAHG*MPERLA
Trigger: GGCAAGGCGCTCAGGCATGCAACCATGGGCACCAGG...TTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CCA 90 bp TGCTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGGCTGGAAGCAGCTACTCTGCGCTaGGGGGCCAACTTCAGACCT +
Preference number: 2 (lower is better)
Translates to: CCPRQGSPSTARQWVGLEAATLR*GANFRP
Trigger: AGGTCTGAAGTTGGCCCCCCAGCGCAGAGTAGCTGC...TTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CAA 90 bp GGGCCCAGCGCTGCAGGTGGGGGAAATTTTCCAGGAGGAGCCAGATaGCGGCTGGAAATCAAGGCCCTCCCTTCAGCCCTCTCAAAGTGG +
Preference number: 2 (lower is better)
Translates to: GPSAAGGGNFPGGAR*RLEIKALPSALSKW
Trigger: CCACTTTGAGAGGGCTGAAGGGAGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCTGCAGCGCTGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp TGCTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGGCTGGAATCCCTTCTCTGGTCCTaGGAGCAGCAGGCTGCTCTA +
Preference number: 2 (lower is better)
Translates to: CCPRQGSPSTARQWVGLESLLWS*EQQAAL
Trigger: TAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGA...TTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp GGCTGCTCTATCCACAATGACTGTCCAGTGGTAGGAGCCAGAAGCAGGGGATCATCAGGGCAGGGGACCTaGCAGGCTCAGGGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: GCSIHNDCPVVGARSRGSSGQGT*QAQGSL
Trigger: GAGGGAGCCCTGAGCCTGGCAGGTCCCCTGCCCTGA...TGATCCCCTGCTTCTGGCTCCTACCACTGGACAGTCATTGTGGATAGAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CCA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTGCCTGCTCACAGCACTaGCCTGGGCGCGCACGTCCA +
Preference number: 2 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSACSQH*PGRARP
Trigger: TGGACGTGCGCGCCCAGGCCAGTGCTGTGAGCAGGC...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp CTAGGTGCAAATCTCCCCTCACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTGGGTGCAAGGGGAAGTaGGAAGTCCCCAGCCATGCA +
Preference number: 2 (lower is better)
Translates to: LGANLPSPKTKARVPQRAGCKGK*EVPSHA
Trigger: TGCATGGCTGGGGACTTCTCACTTCCCCTTGCACCC...AGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp GAACGCCATCCAAGAACTGGAAGCAGCCCTTGTCCCCAAAGGGCTTACAGTCTACGGGGTGGGCCCTTCTaGCTCGGGCCTCACAAGCGT +
Preference number: 2 (lower is better)
Translates to: ERHPRTGSSPCPQRAYSLRGGPF*LGPHKR
Trigger: ACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCG...TAGACTGTAAGCCCTTTGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCAGCCTCCTCCCCGCCTaGTCACAGCACTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGASLLPA*SQHWPG
Trigger: CCCAGGCCAGTGCTGTGAGCAGGCGGGGAGGAGGCT...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp TGCTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGGCTGGAACTGCCTTGCTGCCTTTaGACCTCTAGAGCAAGGACA +
Preference number: 2 (lower is better)
Translates to: CCPRQGSPSTARQWVGLELPCCL*TSRART
Trigger: TGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAG...TTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCCTCTTACCACCCACCTaGCTCCCTCCCCAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPLLPPT*LPPQLS
Trigger: ACTGAGCTGGGGAGGGAGGCAGGTGGGTGGTAAGAG...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR-3UTR CCA 90 bp CAGCCCCACATTCTTTGTCCTCTCTACCCTGCTGCCCTCGCCAAGGCTCTCCGTTGGATGGGTATTGCCTaGTGCCCATGGTTGCATGCC +
Preference number: 2 (lower is better)
Translates to: QPHILCPLYPAALAKALRWMGIA*CPWLHA
Trigger: GGCATGCAACCATGGGCACCAGGCAATACCCATCCA...ACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp CCTGGTGCCCATGGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGCAAGAAGTGTCTAGGTaGAAATCTCCCCTCACCCAA +
Preference number: 2 (lower is better)
Translates to: PGAHGCMPERLAQPAIGVQEVSR*KSPLTQ
Trigger: TTGGGTGAGGGGAGATTTGCACCTAGACACTTCTTG...CACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGGGCACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp CCTTCCCCTTCTCCTGAGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAACCAGCCATGCACACTTaGACCAACGTAGGCAAACCT +
Preference number: 2 (lower is better)
Translates to: PSPSPEEDWHPHSSTAGEPAMHT*TNVGKP
Trigger: AGGTTTGCCTACGTTGGTGCAAGTGTGCATGGCTGG...TTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp CAGCCCCACATTCTTTGTCCTCTCTACCCTGCTGCCCTCGCCAAGGCTCTCCGTACTCAGATCTGCCTCTaGCTGGAGAAGTCATTTCCC +
Preference number: 2 (lower is better)
Translates to: QPHILCPLYPAALAKALRTQICL*LEKSFP
Trigger: GGGAAATGACTTCTCCAGGCAGAGGCAGATCTGAGT...ACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp GGTGGGGATGAGGTGCCTGAGACACATCCATGCTGGGCTCATAGCTCACTGCCTAAGTTCCCAGTTCCCTaGAAAAGGCTGGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: GGDEVPETHPCWAHSSLPKFPVP*KRLEKP
Trigger: TGGCTTCTCCAGCCTTTTTCAGGGAACTGGGAACTT...AGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGGCACCTCATCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR-3UTR GCA 90 bp TCTGTCTGGTTTGGTGTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTATCCTCTCTACCCTGCTaGCCTCGCCAAGGCTCTCCG +
Preference number: 2 (lower is better)
Translates to: SVWFGVCDLCSLTDRVLLSSLPC*PRQGSP
Trigger: CGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGA...TAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACACACCAAACCAGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CCA 90 bp GGCTGCTCTATCCACAATGACTGTCCAGTGGTAGGAGCCAGAAGCAGGGGATCAGCCATAGGTGTGTGCTaGGCAAGAGGGCTCACTTGT +
Preference number: 2 (lower is better)
Translates to: GCSIHNDCPVVGARSRGSAIGVC*ARGLTC
Trigger: ACAAGTGAGCCCTCTTGCCCAGCACACACCTATGGC...TGATCCCCTGCTTCTGGCTCCTACCACTGGACAGTCATTGTGGATAGAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTAAGTTCCCAGTTCCCTaGAAAAGGCTGGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSKFPVP*KRLEKP
Trigger: TGGCTTCTCCAGCCTTTTTCAGGGAACTGGGAACTT...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGGCCAACTTCAGACCTaGGGGAGAGGAGGGACGGGG +
Preference number: 2 (lower is better)
Translates to: RDVPYTLSFLDGSRREKEGQLQT*GRGGTG
Trigger: CCCCGTCCCTCCTCTCCCGCAGGTCTGAAGTTGGCC...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCCCCACACTCATCCACTaGAGGAGAAGCGGATTTATT +
Preference number: 2 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPPTLIH*RRSGFI
Trigger: AATAAATCCGCTTCTCCTGCAGTGGATGAGTGTGGG...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTGCGCACTCATATGCCTaGTTCCTCTTTGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSAHSYA*FLFGEV
Trigger: AACCTCTCCAAAGAGGAAGCAGGCATATGAGTGCGC...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp GAACGCCATCCAAGAACTGGAAGCAGCCCTTGTCCCCAAAGGGCTTACAGTCTAGGGCTCATAGCTCACTaGCTTGCTGCCTTTGAACCT +
Preference number: 2 (lower is better)
Translates to: ERHPRTGSSPCPQRAYSLGLIAH*LAAFEP
Trigger: AGGTTCAAAGGCAGCAAGGCAGTGAGCTATGAGCCC...TAGACTGTAAGCCCTTTGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp GAACGCCATCCAAGAACTGGAAGCAGCCCTTGTCCCCAAAGGGCTTACAGTCTACCTGAGACACATCCATaGTGGGCTCATAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ERHPRTGSSPCPQRAYSLPETHP*WAHSSL
Trigger: CAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGG...TAGACTGTAAGCCCTTTGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CCA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGTCTCCTGAGGAGGACTaGCACCCACACTCATCCACT +
Preference number: 2 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQSPEED*HPHSST
Trigger: AGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGA...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CAA 90 bp TGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTTaGGACCTCAAAGAGAGCTTTGGTCAAGGAAGACAGGAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: WESPLHSTYGPGQPF*DLKESFGQGRQERA
Trigger: TGCTCTTTCCTGTCTTCCTTGACCAAAGCTCTCTTTGAGGTCCAAAAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR-3UTR GCA 90 bp CTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTGAGCATCAGACTCACTCAGTACCTGGGTaGAGGCTCTCCAGAGTTTCC +
Preference number: 2 (lower is better)
Translates to: LLCFGHQRKEVRDVEHQTHSVPG*RLSRVS
Trigger: GGAAACTCTGGAGAGCCTGCACCCAGGTACTGAGTG...AGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACGAAGCCACCACTAGCTaGTCACAGCCTCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHEATTS*SQPQGR
Trigger: CCTGCCCTGAGGCTGTGAGCAGCTAGTGGTGGCTTC...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp GAGAAGTCATTTCCCTTCTCTGGTCCTGAGAGCAGCAGGCTGCTCTATCCACAAACTAGTAAAACCAGTTaGATCATTCCCGGAACCCCC +
Preference number: 2 (lower is better)
Translates to: EKSFPFSGPESSRLLYPQTSKTS*IIPGTP
Trigger: GGGGGTTCCGGGAATGATGCAACTGGTTTTACTAGT...TTGTGGATAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGAAATGACTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp CTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTGAGCATCAGACTACACACGTGAAGGCGTaGGCACTCATATGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: LLCFGHQRKEVRDVEHQTTHVKA*ALICLL
Trigger: AAGCAGGCATATGAGTGCGCACGCCTTCACGTGTGT...AGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp GAACGCCATCCAAGAACTGGAAGCAGCCCTTGTCCCCAAAGGGCTTACAGTCTAGGGAAGAACAATATTTaGTCTACCTTTGTCACGGGG +
Preference number: 2 (lower is better)
Translates to: ERHPRTGSSPCPQRAYSLGKNNI*STFVTG
Trigger: CCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCC...TAGACTGTAAGCCCTTTGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGAGGAAAGAGCATAGATaGGAGGGGACACAATTACAG +
Preference number: 2 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQRKEHR*EGTQLQ
Trigger: CTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCT...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp TCTTTGGCCACCAAAGATTTCCTTTTTCCAGAGGCCATGTCTAGGGGAGCTGTTGCACAACTCTGCATGTaGGGACAAAAGAGAACTTGG +
Preference number: 2 (lower is better)
Translates to: SLATKDFLFPEAMSRGAVAQLCM*GQKRTW
Trigger: CCAAGTTCTCTTTTGTCCTCACATGCAGAGTTGTGC...AACAGCTCCCCTAGACATGGCCTCTGGAAAAAGGAAATCTTTGGTGGCCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR TCA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACCTCTACCTCCAGCAATaGGTCTTGGCAAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHLYLQQ*VLASLG
Trigger: CCCAAGGCTTGCCAAGACTCATTGCTGGAGGTAGAG...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CCA 90 bp CTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTGAGCATCAGACTAGATCTGCCTCTGCCTaGAGAAGTCATTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LLCFGHQRKEVRDVEHQTRSASA*RSHFPS
Trigger: AGAAGGGAAATGACTTCTCCAGGCAGAGGCAGATCT...AGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp TTACAGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAGTGATGGATGGGTATTaGCTGGTGCCCATGGTTGCA +
Preference number: 2 (lower is better)
Translates to: LQRCSLYTVFLGWEQKGEVMDGY*LVPMVA
Trigger: TGCAACCATGGGCACCAGGCAATACCCATCCATCAC...TTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CCA 90 bp GACTCCTTCTGCATCCTTCCCCCAGGAAGCAGAAATAATGAAATGATTCTAGTAGAGATGGGTGATGGATaGGTATTGCCTGGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: DSFCILPPGSRNNEMILVEMGDG*VLPGAH
Trigger: ATGGGCACCAGGCAATACCCATCCATCACCCATCTC...TACTAGAATCATTTCATTATTTCTGCTTCCTGGGGGAAGGATGCAGAAGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CCA 90 bp GACTCCTTCTGCATCCTTCCCCCAGGAAGCAGAAATAATGAAATGATTCTAGTACTGGGGAGAGTGAGATaGGTGATGGATGGGTATTGC +
Preference number: 2 (lower is better)
Translates to: DSFCILPPGSRNNEMILVLGRVR*VMDGYC
Trigger: GCAATACCCATCCATCACCCATCTCACTCTCCCCAG...TACTAGAATCATTTCATTATTTCTGCTTCCTGGGGGAAGGATGCAGAAGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CAA 90 bp AGATACAAAACGACATTGAAGCACCATTTGCAGGTGCAAAGTCATTaGGCACAAAGTGGGAGTATGGGACAGCTCAGAACCTTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: RYKTTLKHHLQVQSH*AQSGSMGQLRTFSV
Trigger: GACAGAGAAGGTTCTGAGCTGTCCCATACTCCCACTTTGTGCCAAATGACTTTGCACCTGCAAATGGTGCTTCAATGTCGTTTTGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR GCA 90 bp CTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTGAGCATCAGACTGGGGATGAACACACTTaGACACTAGTAAAACCAGTT +
Preference number: 2 (lower is better)
Translates to: LLCFGHQRKEVRDVEHQTGDEHT*TLVKPV
Trigger: AACTGGTTTTACTAGTGTGCAAGTGTGTTCATCCCC...AGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp AGGCTCAGGGCTCCCTCCGGCAGCCTCCTCCCCGCCTaGTCACAGCACTGGCCTGGGCGCGCACGTCCAGGA +
Preference number: 3 (lower is better)
Translates to: RLRAPSGSLLPA*SQHWPGRARPG
Trigger: TCCTGGACGTGCGCGCCCAGGCCAGTGCTGTGAGCAGGCGGGGAGGAGGCTGCCGGAGGGAGCCCTGAGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 72 bp GGCCAACTTCAGACCTGCGGGAGAGGAGGGACGGGGTaGGCCCTTCTGCCTCGGGCCTCACAAGCGTCCGTC +
Preference number: 3 (lower is better)
Translates to: GQLQTCGRGGTG*ALLPRASQASV
Trigger: GACGGACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCGTCCCTCCTCTCCCGCAGGTCTGAAGTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp TCTACCCTGCTGCCCTCGCCAAGGCTCTCCGTCCACTaGAAGACAGTGGGTTGGGCTGGAAAGGCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: STLLPSPRLSVH*KTVGWAGKAQP
Trigger: TGGCTGGGCCTTTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 72 bp TGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTaGGTTGGGCTGGAAAGGCCCAGCCATGTGTTCTGG +
Preference number: 3 (lower is better)
Translates to: CPRQGSPSTARQ*VGLERPSHVFW
Trigger: CCAGAACACATGGCTGGGCCTTTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 72 bp TGGATGGGTATTGCCTGGTGCCCATGGTTGCATGCCTaGGCGCCTTGCCCAGCCAGCCATAGGTGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: WMGIAWCPWLHA*APCPASHRCVL
Trigger: CAGCACACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGGGCACCAGGCAATACCCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp GGCAGGGGTCTGTACACTCCCCACTCAGTACCTGGGTaGAGGCTCTCCAGAGTTTCCCTCTTACCACCCACC +
Preference number: 3 (lower is better)
Translates to: GRGLYTPHSVPG*RLSRVSLLPPT
Trigger: GGTGGGTGGTAAGAGGGAAACTCTGGAGAGCCTGCACCCAGGTACTGAGTGGGGAGTGTACAGACCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 72 bp GCTGTTCTCTGGTTGACACCTCTCTACCTCCAGCAATaGGTCTTGGCAAGCCTTGGGGCCCAGCGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: AVLWLTPLYLQQ*VLASLGAQRCR
Trigger: CCTGCAGCGCTGGGCCCCAAGGCTTGCCAAGACTCATTGCTGGAGGTAGAGAGGTGTCAACCAGAGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 72 bp CCAAGGCAGGGGTCTGTACACTCCCCACTCAGTACCTaGGTGCAGGCTCTCCAGAGTTTCCCTCTTACCACC +
Preference number: 3 (lower is better)
Translates to: PRQGSVHSPLST*VQALQSFPLTT
Trigger: GGTGGTAAGAGGGAAACTCTGGAGAGCCTGCACCCAGGTACTGAGTGGGGAGTGTACAGACCCCTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 72 bp CCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGTGCTaGGCAAGAGGGCTCACTTGTGAAACTGAGTGTCTC +
Preference number: 3 (lower is better)
Translates to: PERLAQPAIGVC*ARGLTCETECL
Trigger: GAGACACTCAGTTTCACAAGTGAGCCCTCTTGCCCAGCACACACCTATGGCTGGCTGGGCAAGGCGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 72 bp TCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTaGGCTGGAAAGGCCCAGCCATGTGTTCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: SPRLSVHCKTVG*AGKAQPCVLAS
Trigger: AGAAGCCAGAACACATGGCTGGGCCTTTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 72 bp CAGCTCAGAACCTTCTCTGTCCCCAGCTTAGGGACCTaGAGGTCTGTCTACCTGTCTCCATGCTGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: QLRTFSVPSLGT*RSVYLSPCCPA
Trigger: GGCAGGGCAGCATGGAGACAGGTAGACAGACCTCCAGGTCCCTAAGCTGGGGACAGAGAAGGTTCTGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp CTGCAGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTaGGGCTGGAAATCAAGGCCCTCCCTTCAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: LQVGEIFQEEPD*GWKSRPSLQPS
Trigger: AGAGGGCTGAAGGGAGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp ATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGTaGTGGGCAAGAGGGCTCACTTGTGAAACTGAGTGT +
Preference number: 3 (lower is better)
Translates to: MPERLAQPAIGV*WARGLTCETEC
Trigger: ACACTCAGTTTCACAAGTGAGCCCTCTTGCCCAGCACACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp AAACCAGCCCCACATTCTTTGTCCTCTCTACCCTGCTaGCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAG +
Preference number: 3 (lower is better)
Translates to: KPAPHSLSSLPC*PRQGSPSTARQ
Trigger: CTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp GCAAGGGGAAGTGAGAAGTCCCCAGCCATGCACACTTaGACCAACGTAGGCAAACCTGTTCACACTCAGGGG +
Preference number: 3 (lower is better)
Translates to: ARGSEKSPAMHT*TNVGKPVHTQG
Trigger: CCCCTGAGTGTGAACAGGTTTGCCTACGTTGGTGCAAGTGTGCATGGCTGGGGACTTCTCACTTCCCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CAA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTCGGATTTATTGCAGGTaGGGGAGGAAGGGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSRIYCR*GRKGCK
Trigger: CTTGCACCCCTTCCTCCCCAACCTGCAATAAATCCG...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CAA 90 bp GCAAAACCCTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTCCAGGAGGAGCCAGATaGCGGCTGGAAATCAAGGCC +
Preference number: 3 (lower is better)
Translates to: AKPFMAGGLCPSLTYLKFPGGAR*RLEIKA
Trigger: GGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGG...AAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 72 bp CCTCTGCCTGGAGAAGTCATTTCCCTTCTCTGGTCCTaGGAGCAGCAGGCTGCTCTATCCACAATGACTGTC +
Preference number: 3 (lower is better)
Translates to: PLPGEVISLLWS*EQQAALSTMTV
Trigger: GACAGTCATTGTGGATAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGAAATGACTTCTCCAGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp ACAGCATACACACACGTGAAGGCGTGCGCACTCATATaGCTGCTTCCTCTTTGGAGAGGTTCTCCCTCACCA +
Preference number: 3 (lower is better)
Translates to: TAYTHVKACALI*LLPLWRGSPSP
Trigger: TGGTGAGGGAGAACCTCTCCAAAGAGGAAGCAGGCATATGAGTGCGCACGCCTTCACGTGTGTGTATGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp AGTCATTTCCCTTCTCTGGTCCTGAGAGCAGCAGGCTaGTCTATCCACAATGACTGTCCAGTGGTAGGAGCC +
Preference number: 3 (lower is better)
Translates to: SHFPSLVLRAAG*SIHNDCPVVGA
Trigger: GGCTCCTACCACTGGACAGTCATTGTGGATAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGAAATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp TGCCTGAGACACATCCATGCTGGGCTCATAGCTCACTaGCTTGCTGCCTTTGAACCTCTAGAGCAAGGACAC +
Preference number: 3 (lower is better)
Translates to: CLRHIHAGLIAH*LAAFEPLEQGH
Trigger: GTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR GCA 72 bp CAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTaGCAATTTCCCTCCACCCCTGGAGTTCCATCACTT +
Preference number: 3 (lower is better)
Translates to: QHSSWYTRDARN*QFPSTPGVPSL
Trigger: AAGTGATGGAACTCCAGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR CCA 72 bp TCTGTCTACCTGTCTCCATGCTGCCCTGCCTCTGTCTaGTTTGGTGTGTGTGATCTCTGTTCTCTGACTGAC +
Preference number: 3 (lower is better)
Translates to: SVYLSPCCPASV*FGVCDLCSLTD
Trigger: GTCAGTCAGAGAACAGAGATCACACACACCAAACCAGACAGAGGCAGGGCAGCATGGAGACAGGTAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR GCA 72 bp GTGAAACTGAGTGTCTCCTTTCAAGAAGTGTCTAGGTaGAAATCTCCCCTCACCCAAGACAAAGGCCCGGGT +
Preference number: 3 (lower is better)
Translates to: VKLSVSFQEVSR*KSPLTQDKGPG
Trigger: ACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAGACACTTCTTGAAAGGAGACACTCAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CCA 72 bp GTGAAGGCGTGCGCACTCATATGCCTGCTTCCTCTTTaGAGAGGTTCTCCCTCACCACAGAAAGGAAATCTT +
Preference number: 3 (lower is better)
Translates to: VKACALICLLPL*RGSPSPQKGNL
Trigger: AAGATTTCCTTTCTGTGGTGAGGGAGAACCTCTCCAAAGAGGAAGCAGGCATATGAGTGCGCACGCCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 72 bp TGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTaGGGAAGATCAGATAAGTCCGTGCATGCAAGGCAC +
Preference number: 3 (lower is better)
Translates to: WGPLSFPNLSEV*GRSDKSVHARH
Trigger: GTGCCTTGCATGCACGGACTTATCTGATCTTCCTCAAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR GCA 72 bp ACCTATCTGAAGTTTGAGGAAGATCAGATAAGTCCGTaGATGCAAGGCACCCAGCACAGCAGCTGGTACACA +
Preference number: 3 (lower is better)
Translates to: TYLKFEEDQISP*MQGTQHSSWYT
Trigger: TGTGTACCAGCTGCTGTGCTGGGTGCCTTGCATGCACGGACTTATCTGATCTTCCTCAAACTTCAGATAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR-3UTR CAA 90 bp TTACAGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAACCCAGCCATGCACACTaGCACCAACGTAGGCAAACC +
Preference number: 3 (lower is better)
Translates to: LQRCSLYTVFLGWEQKGEPSHAH*HQRRQT
Trigger: GGTTTGCCTACGTTGGTGCAAGTGTGCATGGCTGGG...TTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CAA 90 bp TTACAGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAGGTGATGGATGGGTATaGCCTGGTGCCCATGGTTGC +
Preference number: 3 (lower is better)
Translates to: LQRCSLYTVFLGWEQKGEGDGWV*PGAHGC
Trigger: GCAACCATGGGCACCAGGCAATACCCATCCATCACC...TTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CAA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGACCTCAAAGAGAGCTTaGGTCAAGGAAGACAGGAAA +
Preference number: 3 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQTSKRA*VKEDRK
Trigger: TTTCCTGTCTTCCTTGACCAAAGCTCTCTTTGAGGT...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR-3UTR CAA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTGGAGAAGCGGATTTATaGCAGGTTGGGGAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPGEADL*QVGEEG
Trigger: CCCTTCCTCCCCAACCTGCAATAAATCCGCTTCTCC...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR TCA 72 bp TATACAACATCACAGCTTAAAGATACAAAACGACATTaGAGCACCATTTGCAGGTGCAAAGTCATTTGGCAC +
Preference number: 3 (lower is better)
Translates to: YTTSQLKDTKRH*STICRCKVIWH
Trigger: GTGCCAAATGACTTTGCACCTGCAAATGGTGCTTCAATGTCGTTTTGTATCTTTAAGCTGTGATGTTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp AGGAGGGACGGGGTGGGCCCTTCTGCCTCGGGCCTCACAAGCGTCCGTCGGGGCCTCACAGCACTGGCCTaGGCGCGCACGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRDGVGPSASGLTSVRRGLTALA*ARTSRK
Trigger: CTTCCTGGACGTGCGCGCCCAGGCCAGTGCTGTGAG...GCCCCGACGGACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCGTCCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GCCCATGGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGTGCTGGCCCCGTGGCAGGCTCTaGGGCGAGTGCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AHGCMPERLAQPAIGVCWPRGRL*GECSST
Trigger: GGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGG...CCAGCACACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp AGGAGGGACGGGGTGGGCCCTTCTGCCTCGGGCCTCACAAGCGTCCGTCGGGGCTCCCCACTCAGTACCTaGGTGCAGGCTCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RRDGVGPSASGLTSVRRGSPLST*VQALQS
Trigger: ACTCTGGAGAGCCTGCACCCAGGTACTGAGTGGGGA...GCCCCGACGGACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCGTCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp AGGAGGGACGGGGTGGGCCCTTCTGCCTCGGGCCTCACAAGCGTCCGTCGGGGCGCCATAGGTGTGTGCTaGGCAAGAGGGCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: RRDGVGPSASGLTSVRRGAIGVC*ARGLTC
Trigger: ACAAGTGAGCCCTCTTGCCCAGCACACACCTATGGC...GCCCCGACGGACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCGTCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp CAGCCCCACATTCTTTGTCCTCTCTACCCTGCTGCCCTCGCCAAGGCTCTCCGTAGCCTCCTCCCCGCCTaGTCACAGCACTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QPHILCPLYPAALAKALRSLLPA*SQHWPG
Trigger: CCCAGGCCAGTGCTGTGAGCAGGCGGGGAGGAGGCT...ACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AGGAGGGACGGGGTGGGCCCTTCTGCCTCGGGCCTCACAAGCGTCCGTCGGGGCCTGGTACACAAGAGATaGCAGGAACTGCCAATTTCC +
Preference number: 4 (lower is better)
Translates to: RRDGVGPSASGLTSVRRGLVHKR*QELPIS
Trigger: GGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG...GCCCCGACGGACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCGTCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CAGCCCCACATTCTTTGTCCTCTCTACCCTGCTGCCCTCGCCAAGGCTCTCCGTGCTGGCGTGATCTCATaGAGCAGAGCGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: QPHILCPLYPAALAKALRAGVIS*SRAAPA
Trigger: GGCCGGAGCCGCTCTGCTCCATGAGATCACGCCAGC...ACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GGTGGGGATGAGGTGCCTGAGACACATCCATGCTGGGCTCATAGCTCACTGCCTGCCAGTGACGACAGCTaGAGCCAGGGAGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGDEVPETHPCWAHSSLPASDDS*SQGAGR
Trigger: CCTGCCCGCTCCCTGGCTCCAGCTGTCGTCACTGGC...AGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGGCACCTCATCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp CTAGGTGCAAATCTCCCCTCACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTCAGGCCCTTCAGCACTaGCAGGCGCTCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LGANLPSPKTKARVPQRAQALQH*QALRQA
Trigger: AGCCTGTCGGAGCGCCTGGCAGTGCTGAAGGGCCTG...AGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTGCGGCTGGAAATCAAGGCCCTTGCAGCTCCACCGACTaGCGCCGTCGCACCTCGCGC +
Preference number: 4 (lower is better)
Translates to: RWGKFSRRSQIAAGNQGPCSSTD*RRRTSR
Trigger: GCGCGAGGTGCGACGGCGGCAGTCGGTGGAGCTGCA...AGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp CCTTCCCCTTCTCCTGAGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAAGGCCAACTTCAGACCTaGGGGAGAGGAGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: PSPSPEEDWHPHSSTAGEGQLQT*GRGGTG
Trigger: CCCCGTCCCTCCTCTCCCGCAGGTCTGAAGTTGGCC...TTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TCCAGTGGTAGGAGCCAGAAGCAGGGGATCACGGGCTGTGGAGAGGCAGACAGACCTGGTGCCCATGGTTaGATGCCTGAGCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SSGRSQKQGITGCGEADRPGAHG*MPERLA
Trigger: GGCAAGGCGCTCAGGCATGCAACCATGGGCACCAGG...TCTGTCTGCCTCTCCACAGCCCGTGATCCCCTGCTTCTGGCTCCTACCACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GCCCATGGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGTGCTGGGGGGTGGGGATGAGGTaGCTGAGACACATCCATGCT +
Preference number: 4 (lower is better)
Translates to: AHGCMPERLAQPAIGVCWGVGMR*LRHIHA
Trigger: AGCATGGATGTGTCTCAGGCACCTCATCCCCACCCC...CCAGCACACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCACCCCTGGAGTTCCAGAGCCCTGCGGGGCTaGCCCAGCTGTCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LVHKRCQELPISLHPWSSRALRG*PSCLRA
Trigger: GGCCCTGAGACAGCTGGGCCAGCCCCGCAGGGCTCT...GGAACTCCAGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCGCGGCCCTCAGGCCTTaGTACCCCGTGGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPAALRP*YPVAGS
Trigger: AGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGC...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CCTGGTGCCCATGGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGTGCAAGACAGTGGGTTaGGCTGGAAAGGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGAHGCMPERLAQPAIGVCKTVG*AGKAQP
Trigger: TGGCTGGGCCTTTCCAGCCCAACCCACTGTCTTGCA...CACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGGGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GGTGGGGATGAGGTGCCTGAGACACATCCATGCTGGGCTCATAGCTCACTGCCTCCCTTCCCCTTCTCCTaGGGAGGACTGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: GGDEVPETHPCWAHSSLPPFPFS*GGLAPT
Trigger: TGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGGG...AGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGGCACCTCATCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCCCATGGTTGCATGCCTaGGCGCCTTGCCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPPWLHA*APCPAS
Trigger: GCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGG...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp CTAGGTGCAAATCTCCCCTCACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTGTGCCCATGGTTGCATaGCTGAGCGCCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LGANLPSPKTKARVPQRAVPMVA*LSALPS
Trigger: GCTGGGCAAGGCGCTCAGGCATGCAACCATGGGCAC...AGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TGCTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGGCTGGAAGTCTACCTGTCTCCATaGTGCCCTGCCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: CCPRQGSPSTARQWVGLEVYLSP*CPASVW
Trigger: CCAGACAGAGGCAGGGCAGCATGGAGACAGGTAGAC...TTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AGGAGGGACGGGGTGGGCCCTTCTGCCTCGGGCCTCACAAGCGTCCGTCGGGGCAGCACCATTTGCAGGTaGAAAGTCATTTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: RRDGVGPSASGLTSVRRGSTICR*KVIWHK
Trigger: TTTGTGCCAAATGACTTTGCACCTGCAAATGGTGCT...GCCCCGACGGACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCGTCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCGCCAGTGACGACAGCTaGAGCCAGGGAGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLASDDS*SQGAGR
Trigger: CCTGCCCGCTCCCTGGCTCCAGCTGTCGTCACTGGC...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCGAGGCTGGGCCAGGATaGGGCCAGCCCCAAACCCAT +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPEAGPG*GQPQTH
Trigger: ATGGGTTTGGGGCTGGCCCCATCCTGGCCCAGCCTC...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TCCAGTGGTAGGAGCCAGAAGCAGGGGATCACGGGCTGTGGAGAGGCAGACAGAAAGAGGTTAAGAGGCTaGGCCAGGATGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSGRSQKQGITGCGEADRKRLRG*ARMGPA
Trigger: GGCTGGCCCCATCCTGGCCCAGCCTCTTAACCTCTT...TCTGTCTGCCTCTCCACAGCCCGTGATCCCCTGCTTCTGGCTCCTACCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CAA 72 bp CTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTaGGGCTGGAAAGGCCCAGCCATGTGTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LAKALRPLQDSG*GWKGPAMCSGF
Trigger: GAAGCCAGAACACATGGCTGGGCCTTTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp CTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCACCCCTGGAGTTCCGTCTCAGGGCCAGGATaGTCCGGGCACTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LVHKRCQELPISLHPWSSVSGPG*SGHSLS
Trigger: CGAGAGCGAGTGCCCGGAGCATCCTGGCCCTGAGAC...GGAACTCCAGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCAGCGGAGCTCCCACATaGTGCAGAGCCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGASGAPT*CRALRG
Trigger: GCCCCGCAGGGCTCTGCAGCATGTGGGAGCTCCGCT...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp GAACGCCATCCAAGAACTGGAAGCAGCCCTTGTCCCCAAAGGGCTTACAGTCTATCAGGGCAGGGGACCTaGCAGGCTCAGGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ERHPRTGSSPCPQRAYSLSGQGT*QAQGSL
Trigger: GAGGGAGCCCTGAGCCTGGCAGGTCCCCTGCCCTGA...TAGACTGTAAGCCCTTTGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TCCAGTGGTAGGAGCCAGAAGCAGGGGATCACGGGCTGTGGAGAGGCAGACAGACCAGCCATAGGTGTGTaGTGGGCAAGAGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SSGRSQKQGITGCGEADRPAIGV*WARGLT
Trigger: AGTGAGCCCTCTTGCCCAGCACACACCTATGGCTGG...TCTGTCTGCCTCTCCACAGCCCGTGATCCCCTGCTTCTGGCTCCTACCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TTCTTGGATGGGAGCAGAAGGGAGAAAGAGGCTAGAGACTTAGTGCCTGGGTGCTCAGGGCAGGGGACCTaGCAGGCTCAGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FLDGSRREKEARDLVPGCSGQGT*QAQGSP
Trigger: TGGGGAGCCCTGAGCCTGGCAGGTCCCCTGCCCTGA...GCACCCAGGCACTAAGTCTCTAGCCTCTTTCTCCCTTCTGCTCCCATCCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551526.5
CDS-3UTR CCA 90 bp GTCACTTTGGTTTCTGACTCCACCCTTCTTCTGGTAGTGAGGCCAAGTGGCTGTAGAGCCCTGCGGGGCTaGCCCAGCTGTCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VTLVSDSTLLLVVRPSGCRALRG*PSCLRA
Trigger: GGCCCTGAGACAGCTGGGCCAGCCCCGCAGGGCTCT...ACAGCCACTTGGCCTCACTACCAGAAGAAGGGTGGAGTCAGAAACCAAAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCAGGAGGACAGCTCTGTGGGCCCCGCTTATGTaGCCCAGAGCCTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: AAFEPLEQGHSGARRTALWAPLM*PRACTR
Trigger: CCTGGTACAGGCTCTGGGCCACATAAGCGGGGCCCA...CAGAGCTGTCCTCCTGGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCGCTGGCGTGATCTCATaGAGCAGAGCGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLAGVIS*SRAAPA
Trigger: GGCCGGAGCCGCTCTGCTCCATGAGATCACGCCAGC...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp AGACTTAGTGCCTGGGTGCAGGCTCTCCAGAGTTTCCCTCTTACCACCCACCTGCGCGGCGCTCATCGGTaGAGGCGAAGATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLSAWVQALQSFPLTTHLRGAHR*RRRCRA
Trigger: TGCTCTGCATCTTCGCCTCCACCGATGAGCGCCGCG...CAGGTGGGTGGTAAGAGGGAAACTCTGGAGAGCCTGCACCCAGGCACTAAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551526.5
3UTR CAA 72 bp GCTGCAGGTGGGGGAAATTTTCCAGGAGGAGCCAGATaGCGGCTGGAAATCAAGGCCCTCCCTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AAGGGNFPGGAR*RLEIKALPSAL
Trigger: GAGGGCTGAAGGGAGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCGGATGTCTGCTGGCGTaGTCTCATGGAGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPGCLLA*SHGAER
Trigger: CCGCTCTGCTCCATGAGATCACGCCAGCAGACATCC...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp CCTTCCCCTTCTCCTGAGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAAGGAAAAGCTGCTGCCTaGGGACTGGGGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PSPSPEEDWHPHSSTAGEGKAAA*GLGRVR
Trigger: TCTCACTCTCCCCAGTCCTCAGGCAGCAGCTTTTCC...TTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp CTAGGTGCAAATCTCCCCTCACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTCCCTTCTCTGGTCCTaGGAGCAGCAGGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: LGANLPSPKTKARVPQRASLLWS*EQQAAL
Trigger: TAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGA...AGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AGACTTAGTGCCTGGGTGCAGGCTCTCCAGAGTTTCCCTCTTACCACCCACCTGGAAGCCACCACTAGCTaGTCACAGCCTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLSAWVQALQSFPLTTHLEATTS*SQPQGR
Trigger: CCTGCCCTGAGGCTGTGAGCAGCTAGTGGTGGCTTC...CAGGTGGGTGGTAAGAGGGAAACTCTGGAGAGCCTGCACCCAGGCACTAAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551526.5
CDS-3UTR GCA 90 bp CCTTCCCCTTCTCCTGAGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAAGGGTGGAAAAGCTGCTaGCTGAGGACTGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: PSPSPEEDWHPHSSTAGEGWKSC*LRTGES
Trigger: ACTCTCCCCAGTCCTCAGGCAGCAGCTTTTCCACCC...TTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp CCTTCCCCTTCTCCTGAGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAAGCAAGGACACTCAGGTaGCAGGAGGACAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSPSPEEDWHPHSSTAGEARTLR*QEDSSG
Trigger: TCCAGAGCTGTCCTCCTGGCACCTGAGTGTCCTTGC...TTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTTGGGCCCCGCTTATGTaGCCCAGAGCCTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSWAPLM*PRACTR
Trigger: CCTGGTACAGGCTCTGGGCCACATAAGCGGGGCCCA...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCACCCCTGGAGTTCCTCCACAGTCACCGCCTaGCCAGCCGTCGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LVHKRCQELPISLHPWSSSTVTA*PAVVLL
Trigger: CAACAGCACGACGGCTGGCCAGGCGGTGACTGTGGA...GGAACTCCAGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGGGCCTTGGTACCCCGTaGCAGGCTCTGCGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQGLGTP*QALRRV
Trigger: CACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCC...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCAGTCTTGGCAAGCCTTaGGGCCCAGCGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLSLGKP*GPALQV
Trigger: CACCTGCAGCGCTGGGCCCCAAGGCTTGCCAAGACT...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTGCTAATCTCTGGGTCTaGGGCACCCCTGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSANLWV*GTPGDG
Trigger: CCCGTCTCCAGGGGTGCCCCAGACCCAGAGATTAGC...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCGTCCCCGCGGATGTCTaGTGGCGTGATCTCATGGAG +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLVPADV*WRDLME
Trigger: CTCCATGAGATCACGCCAGCAGACATCCGCGGGGAC...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp AGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTGCGGCTGGAAATCAAGGCCCTGAAGCCACCACTAGCTaGTCACAGCCTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RWGKFSRRSQIAAGNQGPEATTS*SQPQGR
Trigger: CCTGCCCTGAGGCTGTGAGCAGCTAGTGGTGGCTTC...AGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TGCTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGGCTGGAAGCGCACTCATATGCCTaGTTCCTCTTTGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CCPRQGSPSTARQWVGLEAHSYA*FLFGEV
Trigger: AACCTCTCCAAAGAGGAAGCAGGCATATGAGTGCGC...TTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTCCCTGGAGAAGGCTATaGAGCGGAGCTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFPWRRL*SGAPTC
Trigger: GCATGTGGGAGCTCCGCTCCATAGCCTTCTCCAGGG...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp CCTTCCCCTTCTCCTGAGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAACGACAGGCTCTTGGCTaGCGGAAACAGCACGTAGTT +
Preference number: 4 (lower is better)
Translates to: PSPSPEEDWHPHSSTAGERQALG*RKQHVV
Trigger: AACTACGTGCTGTTTCCGCCAGCCAAGAGCCTGTCG...TTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCGCAGCTACTCTGCGCTaGGGGGCCAACTTCAGACCT +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLAATLR*GANFRP
Trigger: AGGTCTGAAGTTGGCCCCCCAGCGCAGAGTAGCTGC...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTTGGGAGGCTAATCTCTaGGTCTGGGGCACCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFWEANL*VWGTPG
Trigger: TCCAGGGGTGCCCCAGACCCAGAGATTAGCCTCCCA...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CTAGGTGCAAATCTCCCCTCACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTCAGAGATTCCTGGGGTaGAAAAGCTGCTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGANLPSPKTKARVPQRAQRFLG*KSCCLR
Trigger: CCTCAGGCAGCAGCTTTTCCACCCCAGGAATCTCTG...AGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CAGCCCCACATTCTTTGTCCTCTCTACCCTGCTGCCCTCGCCAAGGCTCTCCGTGGTAGTGAGGCCAAGTaGCTGTCACTAGCTATTGGG +
Preference number: 4 (lower is better)
Translates to: QPHILCPLYPAALAKALRGSEAK*LSLAIG
Trigger: CCCAATAGCTAGTGACAGCCACTTGGCCTCACTACC...ACGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GGTGGGGATGAGGTGCCTGAGACACATCCATGCTGGGCTCATAGCTCACTGCCTACGCCATCCAAGAACTaGAAGCAGCCCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GGDEVPETHPCWAHSSLPTPSKN*KQPLSP
Trigger: TGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGT...AGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGGCACCTCATCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GTCACTTTGGTTTCTGACTCCACCCTTCTTCTGGTAGTGAGGCCAAGTGGCTGTTCCTCTCTACCCTGCTaGCCTCGCCAAGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VTLVSDSTLLLVVRPSGCSSLPC*PRQGSP
Trigger: CGGAGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGA...ACAGCCACTTGGCCTCACTACCAGAAGAAGGGTGGAGTCAGAAACCAAAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GAGAAGTCATTTCCCTTCTCTGGTCCTGAGAGCAGCAGGCTGCTCTATCCACAACGCGGCGCTCATCGGTaGAGGCGAAGATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EKSFPFSGPESSRLLYPQRGAHR*RRRCRA
Trigger: TGCTCTGCATCTTCGCCTCCACCGATGAGCGCCGCG...TTGTGGATAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGAAATGACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TCTTTGGCCACCAAAGATTTCCTTTTTCCAGAGGCCATGTCTAGGGGAGCTGTTGCCTGCTCACAGCACTaGCCTGGGCGCGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: SLATKDFLFPEAMSRGAVACSQH*PGRARP
Trigger: TGGACGTGCGCGCCCAGGCCAGTGCTGTGAGCAGGC...AACAGCTCCCCTAGACATGGCCTCTGGAAAAAGGAAATCTTTGGTGGCCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCAGGAGGACAGCTCTGTCTCCTGAGGAGGACTaGCACCCACACTCATCCACT +
Preference number: 4 (lower is better)
Translates to: AAFEPLEQGHSGARRTALSPEED*HPHSST
Trigger: AGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGA...CAGAGCTGTCCTCCTGGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCCATCTCCTTCTGCCTaGATCTTGTGGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLPSPSA*ILWAPR
Trigger: CCTGGGAGCCCACAAGATCCAGGCAGAAGGAGATGG...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GGTGGGGATGAGGTGCCTGAGACACATCCATGCTGGGCTCATAGCTCACTGCCTGCTGTCACTAGCTATTaGGGGTTTGGGAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GGDEVPETHPCWAHSSLPAVTSY*GFGRVL
Trigger: GAGGACTCTCCCAAACCCCCAATAGCTAGTGACAGC...AGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGGCACCTCATCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp TCCAGTGGTAGGAGCCAGAAGCAGGGGATCACGGGCTGTGGAGAGGCAGACAGACTCTGGAGGTCACTTTaGTTTCTGACTCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: SSGRSQKQGITGCGEADRLWRSL*FLTPPF
Trigger: GAAGGGTGGAGTCAGAAACCAAAGTGACCTCCAGAG...TCTGTCTGCCTCTCCACAGCCCGTGATCCCCTGCTTCTGGCTCCTACCACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCTAGAGGAGTTTGTTaGGGTGAGGTGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPSRGVC*GEVGWG
Trigger: TCCCCACCCCACCTCACCCCAACAAACTCCTCTAGA...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp AGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTGCGGCTGGAAATCAAGGCCCTTCCACTGCAAGACAGTaGGTTGGGCTGGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RWGKFSRRSQIAAGNQGPSTARQ*VGLERP
Trigger: GGGCCTTTCCAGCCCAACCCACTGTCTTGCAGTGGA...AGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CCTGGTGCCCATGGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGAGGTGCAAAGTCATTTaGCACAAAGTGGGAGTATGG +
Preference number: 4 (lower is better)
Translates to: PGAHGCMPERLAQPAIGVRCKVI*HKVGVW
Trigger: CCATACTCCCACTTTGTGCCAAATGACTTTGCACCT...CACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGGGCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CAA 72 bp CACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTaGTTTTCTGCGCCGAAGTGGGAGGCTAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: HPRQRPGSHKGL*FSAPKWEANLW
Trigger: CCAGAGATTAGCCTCCCACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CAA 72 bp GGTGCTCTTAAAGGGCAGAAACCAGCCCCACATTCTTaGTCCTCTCTACCCTGCTGCCCTCGCCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GALKGQKPAPHS*SSLPCCPRQGS
Trigger: AGAGCCTTGGCGAGGGCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTGGTTTCTGCCCTTTAAGAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp CTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCACCCCTGGAGTTCCCATCAAATTTGCCAGTaGCGACAGCTGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVHKRCQELPISLHPWSSHQICQ*RQLEPG
Trigger: CCCTGGCTCCAGCTGTCGTCACTGGCAAATTTGATG...GGAACTCCAGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCCTGCCTTGCTGCCTTTaGACCTCTAGAGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPLPCCL*TSRART
Trigger: TGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAG...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp CAAGAGGGCTCACTTGTGAAACTGAGTGTCTCCTTTCAAGAAGTGTCTAGGTGCGTCTCAGGGCCAGGATaGTCCGGGCACTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: QEGSLVKLSVSFQEVSRCVSGPG*SGHSLS
Trigger: CGAGAGCGAGTGCCCGGAGCATCCTGGCCCTGAGAC...GCACCTAGACACTTCTTGAAAGGAGACACTCAGTTTCACAAGTGAGCCCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTTGTGGCCAGGAACTCTaGGAACACAGCCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFCGQEL*EHSPGE
Trigger: TTCTCCAGGGCTGTGTTCGCAGAGTTCCTGGCCACA...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCGAGCCTGTACCAGGGTaGCAATACCCAAGCCAAACG +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLEPVPG*QYPSQT
Trigger: CGTTTGGCTTGGGTATTGGCACCCTGGTACAGGCTC...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGGTCCCCGCGGATGTCTaGTGGCGTGATCTCATGGAG +
Preference number: 4 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQVPADV*WRDLME
Trigger: CTCCATGAGATCACGCCAGCAGACATCCGCGGGGAC...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTCACTCAGTACCTGGGTaGAGGCTCTCCAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSHSVPG*RLSRVS
Trigger: GGAAACTCTGGAGAGCCTGCACCCAGGTACTGAGTG...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCCCAAGCCAAACGCCATaGCAATCTGTAGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPPSQTP*QSVAQR
Trigger: CCTCTGTGCTACAGATTGCCATGGCGTTTGGCTTGG...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GTCACTTTGGTTTCTGACTCCACCCTTCTTCTGGTAGTGAGGCCAAGTGGCTGTCCCGCGGATGTCTGCTaGCGTGATCTCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VTLVSDSTLLLVVRPSGCPADVC*RDLMEQ
Trigger: CTGCTCCATGAGATCACGCCAGCAGACATCCGCGGG...ACAGCCACTTGGCCTCACTACCAGAAGAAGGGTGGAGTCAGAAACCAAAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCAGGAGGACAGCTCTGGAGATGGGTGATGGATaGGTATTGCCTGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: AAFEPLEQGHSGARRTALEMGDG*VLPGAH
Trigger: ATGGGCACCAGGCAATACCCATCCATCACCCATCTC...CAGAGCTGTCCTCCTGGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TCCAGTGGTAGGAGCCAGAAGCAGGGGATCACGGGCTGTGGAGAGGCAGACAGAAGATCTGCCTCTGCCTaGAGAAGTCATTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSGRSQKQGITGCGEADRRSASA*RSHFPS
Trigger: AGAAGGGAAATGACTTCTCCAGGCAGAGGCAGATCT...TCTGTCTGCCTCTCCACAGCCCGTGATCCCCTGCTTCTGGCTCCTACCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GGTGGGGATGAGGTGCCTGAGACACATCCATGCTGGGCTCATAGCTCACTGCCTCTCTGGAGGTCACTTTaGTTTCTGACTCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: GGDEVPETHPCWAHSSLPLWRSL*FLTPPF
Trigger: GAAGGGTGGAGTCAGAAACCAAAGTGACCTCCAGAG...AGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGGCACCTCATCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCACCCAGCACAGCAGCTaGTACACAAGAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLTQHSS*YTRDAR
Trigger: CCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGT...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp CTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCACCCCTGGAGTTCCCCCAGCTTAGGGACCTaGAGGTCTGTCTACCTGTCT +
Preference number: 4 (lower is better)
Translates to: LVHKRCQELPISLHPWSSPSLGT*RSVYLS
Trigger: AGACAGGTAGACAGACCTCCAGGTCCCTAAGCTGGG...GGAACTCCAGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
3UTR CAA 72 bp GATAGGAGAACGCCATCCAAGAACTGGAAGCAGCCCTaGTCCCCAAAGGGCTTACAGTCTAGCTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DRRTPSKNWKQP*SPKGLQSSWEA
Trigger: TGCCTCCCAGCTAGACTGTAAGCCCTTTGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGTTCTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GCAAAACCCTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTGGGTGCAAGGGGAAGTaGGAAGTCCCCAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: AKPFMAGGLCPSLTYLKFGCKGK*EVPSHA
Trigger: TGCATGGCTGGGGACTTCTCACTTCCCCTTGCACCC...AAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp CCTTCCCCTTCTCCTGAGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAAGTGCTTGGTGCAGTGTaGGATAGATACAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: PSPSPEEDWHPHSSTAGEVLGAV*DRYRQK
Trigger: CTTCTGTCTGTATCTATCTCACACTGCACCAAGCAC...TTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGAGCGGAGCTCCCACATaGTGCAGAGCCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RDVPYTLSFLDGSRREKESGAPT*CRALRG
Trigger: GCCCCGCAGGGCTCTGCAGCATGTGGGAGCTCCGCT...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGAGGCTCTGCGGCGAGTaGAGCTCCACCGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: RDVPYTLSFLDGSRREKERLCGE*SSTDCR
Trigger: GCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCT...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GCAAAACCCTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTCTCTTACCACCCACCTaGCTCCCTCCCCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: AKPFMAGGLCPSLTYLKFLLPPT*LPPQLS
Trigger: ACTGAGCTGGGGAGGGAGGCAGGTGGGTGGTAAGAG...AAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp GGCTGCTCTATCCACAATGACTGTCCAGTGGTAGGAGCCAGAAGCAGGGGATCAGTGATGGATGGGTATTaGCTGGTGCCCATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GCSIHNDCPVVGARSRGSVMDGY*LVPMVA
Trigger: TGCAACCATGGGCACCAGGCAATACCCATCCATCAC...TGATCCCCTGCTTCTGGCTCCTACCACTGGACAGTCATTGTGGATAGAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GTCACTTTGGTTTCTGACTCCACCCTTCTTCTGGTAGTGAGGCCAAGTGGCTGTGCAAGGACACTCAGGTaGCAGGAGGACAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VTLVSDSTLLLVVRPSGCARTLR*QEDSSG
Trigger: TCCAGAGCTGTCCTCCTGGCACCTGAGTGTCCTTGC...ACAGCCACTTGGCCTCACTACCAGAAGAAGGGTGGAGTCAGAAACCAAAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCCTGAGACACATCCATaGTGGGCTCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLPETHP*WAHSSL
Trigger: CAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGG...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp AGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTGCGGCTGGAAATCAAGGCCCTTACCTGTCTCCATGCTaGCCTGCCTCTGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RWGKFSRRSQIAAGNQGPYLSPC*PASVWF
Trigger: AAACCAGACAGAGGCAGGGCAGCATGGAGACAGGTA...AGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTCCAAGCCAAACGCCATaGCAATCTGTAGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSPSQTP*QSVAQR
Trigger: CCTCTGTGCTACAGATTGCCATGGCGTTTGGCTTGG...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GACTCCTTCTGCATCCTTCCCCCAGGAAGCAGAAATAATGAAATGATTCTAGTAGGCCGTAGAGGCCGCTaGCGGCCCTCAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: DSFCILPPGSRNNEMILVGRRGR*RPSGLG
Trigger: ACCAAGGCCTGAGGGCCGCCAGCGGCCTCTACGGCC...TACTAGAATCATTTCATTATTTCTGCTTCCTGGGGGAAGGATGCAGAAGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp AGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTGCGGCTGGAAATCAAGGCCCTGGATTTATTGCAGGTTaGGGAGGAAGGGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: RWGKFSRRSQIAAGNQGPGFIAG*GGRGAR
Trigger: CCTTGCACCCCTTCCTCCCCAACCTGCAATAAATCC...AGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp AGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTGCGGCTGGAAATCAAGGCCCTAGGGGAGCTGTTCTCTaGTTGACACCTCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: RWGKFSRRSQIAAGNQGPRGAVL*LTPLYL
Trigger: GAGGTAGAGAGGTGTCAACCAGAGAACAGCTCCCCT...AGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CCTGGTGCCCATGGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGAGAAATTTAGAAGCCTaGGTTCTAGACTCAGATCTG +
Preference number: 4 (lower is better)
Translates to: PGAHGCMPERLAQPAIGVRNLEA*VLDSDL
Trigger: CAGATCTGAGTCTAGAACCCAGGCTTCTAAATTTCT...CACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGGGCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GGCTGCTCTATCCACAATGACTGTCCAGTGGTAGGAGCCAGAAGCAGGGGATCAGAGACACATCCATGCTaGGCTCATAGCTCACTGCCT +
Preference number: 4 (lower is better)
Translates to: GCSIHNDCPVVGARSRGSETHPC*AHSSLP
Trigger: AGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTC...TGATCCCCTGCTTCTGGCTCCTACCACTGGACAGTCATTGTGGATAGAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCGAGACACATCCATGCTaGGCTCATAGCTCACTGCCT +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLETHPC*AHSSLP
Trigger: AGGCAGTGAGCTATGAGCCCAGCATGGATGTGTCTC...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTAAAACCCTTCATGGCTaGGGGCCTTTGTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFKTLHG*GPLSFP
Trigger: AGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTT...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GAGAAGTCATTTCCCTTCTCTGGTCCTGAGAGCAGCAGGCTGCTCTATCCACAAGACAGTGGGTTGGGCTaGAAAGGCCCAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: EKSFPFSGPESSRLLYPQDSGLG*KGPAMC
Trigger: ACACATGGCTGGGCCTTTCCAGCCCAACCCACTGTC...TTGTGGATAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGAAATGACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTCTGAGAGCAGCAGGCTaGTCTATCCACAATGACTGT +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFLRAAG*SIHNDC
Trigger: ACAGTCATTGTGGATAGAGCAGCCTGCTGCTCTCAG...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp CTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCACCCCTGGAGTTCCACTCAGATCTGCCTCTaGCTGGAGAAGTCATTTCCC +
Preference number: 4 (lower is better)
Translates to: LVHKRCQELPISLHPWSSTQICL*LEKSFP
Trigger: GGGAAATGACTTCTCCAGGCAGAGGCAGATCTGAGT...GGAACTCCAGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCCCTGAGACACATCCATaGTGGGCTCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGAPETHP*WAHSSL
Trigger: CAGTGAGCTATGAGCCCAGCATGGATGTGTCTCAGG...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp CCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGCTAGAGACATGTGTTCTGGCTTCTaGCAGGGCCTCCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PYTLSFLDGSRREKEARDMCSGF*QGLPGA
Trigger: GGCTCCTGGGAGGCCCTGGCAGAAGCCAGAACACAT...GTCTCTAGCCTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TCTGTCTGGTTTGGTGTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAGGCTCTCCGTCCACTaGAAGACAGTGGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SVWFGVCDLCSLTDRVLLRLSVH*KTVGWA
Trigger: AGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCT...TAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACACACCAAACCAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTGAGCATCAGACTCCCTGGAGAAGGCTATaGAGCGGAGCTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: LLCFGHQRKEVRDVEHQTPWRRL*SGAPTC
Trigger: GCATGTGGGAGCTCCGCTCCATAGCCTTCTCCAGGG...AGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TCTTTGGCCACCAAAGATTTCCTTTTTCCAGAGGCCATGTCTAGGGGAGCTGTTCCCGCGGATGTCTGCTaGCGTGATCTCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLATKDFLFPEAMSRGAVPADVC*RDLMEQ
Trigger: CTGCTCCATGAGATCACGCCAGCAGACATCCGCGGG...AACAGCTCCCCTAGACATGGCCTCTGGAAAAAGGAAATCTTTGGTGGCCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TCTTTGGCCACCAAAGATTTCCTTTTTCCAGAGGCCATGTCTAGGGGAGCTGTTTGGATCCCAAGGAGGTaGCCCAGGGCCACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLATKDFLFPEAMSRGAVWIPRR*PRATEK
Trigger: CTTCTCTGTGGCCCTGGGCCACCTCCTTGGGATCCA...AACAGCTCCCCTAGACATGGCCTCTGGAAAAAGGAAATCTTTGGTGGCCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGGAGCCAGATTGCGGCTaGAAATCAAGGCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQEPDCG*KSRPSL
Trigger: AAGGGAGGGCCTTGATTTCCAGCCGCAATCTGGCTC...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CAAGAGGGCTCACTTGTGAAACTGAGTGTCTCCTTTCAAGAAGTGTCTAGGTGCGCCCAGCGCTGCAGGTaGGGGAAATTTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QEGSLVKLSVSFQEVSRCAQRCR*GKFSRR
Trigger: CCTCCTGGAAAATTTCCCCCACCTGCAGCGCTGGGC...GCACCTAGACACTTCTTGAAAGGAGACACTCAGTTTCACAAGTGAGCCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCCTGGGGAGAGTGAGATaGGTGATGGATGGGTATTGC +
Preference number: 4 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGALGRVR*VMDGYC
Trigger: GCAATACCCATCCATCACCCATCTCACTCTCCCCAG...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CCTTCCCCTTCTCCTGAGGAGGACTGGCACCCACACTCATCCACTGCAGGAGAACCTCAAAGAGAGCTTTaGTCAAGGAAGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PSPSPEEDWHPHSSTAGEPQREL*SRKTGK
Trigger: CTTTCCTGTCTTCCTTGACCAAAGCTCTCTTTGAGG...TTCTCCTGCAGTGGATGAGTGTGGGTGCCAGTCCTCCTCAGGAGAAGGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCGGTAGTGAGGCCAAGTaGCTGTCACTAGCTATTGGG +
Preference number: 4 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGAGSEAK*LSLAIG
Trigger: CCCAATAGCTAGTGACAGCCACTTGGCCTCACTACC...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCAGGAGGACAGCTCTGATTTCCCTCCACCCCTaGAGTTCCATCACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: AAFEPLEQGHSGARRTALISLHP*SSITWN
Trigger: ATTCCAAGTGATGGAACTCCAGGGGTGGAGGGAAAT...CAGAGCTGTCCTCCTGGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GAACGCCATCCAAGAACTGGAAGCAGCCCTTGTCCCCAAAGGGCTTACAGTCTATGCCCTGCCTCTGTCTaGTTTGGTGTGTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: ERHPRTGSSPCPQRAYSLCPASV*FGVCDL
Trigger: GAGATCACACACACCAAACCAGACAGAGGCAGGGCA...TAGACTGTAAGCCCTTTGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCAGGAGGACAGCTCTGCACAAAGTGGGAGTATaGGACAGCTCAGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: AAFEPLEQGHSGARRTALHKVGV*DSSEPS
Trigger: AGAAGGTTCTGAGCTGTCCCATACTCCCACTTTGTG...CAGAGCTGTCCTCCTGGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp ACAGGAAAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACAGGGCCTGTGGCCAGTTaGGGGCAGAGCCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: TGKSIDERGHNYRDVPYTGPVAS*GQSRGQ
Trigger: TTGGCCTCGGCTCTGCCCTCAACTGGCCACAGGCCC...TGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp AAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACACTGTCTGGGCCTGTGGCCAGTTaGGGGCAGAGCCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: KSIDERGHNYRDVPYTLSGPVAS*GQSRGQ
Trigger: TTGGCCTCGGCTCTGCCCTCAACTGGCCACAGGCCC...AGACAGTGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp GAACGCCATCCAAGAACTGGAAGCAGCCCTTGTCCCCAAAGGGCTTACAGTCTAAAGTTCCCAGTTCCCTaGAAAAGGCTGGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ERHPRTGSSPCPQRAYSLKFPVP*KRLEKP
Trigger: TGGCTTCTCCAGCCTTTTTCAGGGAACTGGGAACTT...TAGACTGTAAGCCCTTTGGGGACAAGGGCTGCTTCCAGTTCTTGGATGGCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTGCACAACTCTGCATGTaGGGACAAAAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSAQLCM*GQKRTW
Trigger: CCAAGTTCTCTTTTGTCCTCACATGCAGAGTTGTGC...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGGGAGGTAAGGGATGTTaGGCATCAGACTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQGGKGC*ASDSFC
Trigger: GCAGAAGGAGTCTGATGCTCAACATCCCTTACCTCC...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GAGAAGTCATTTCCCTTCTCTGGTCCTGAGAGCAGCAGGCTGCTCTATCCACAATCTCTGTTCTCTGACTaGCCGGGTGCTCTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: EKSFPFSGPESSRLLYPQSLFSD*PGALKG
Trigger: CCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGA...TTGTGGATAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGAAATGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp ACAGGAAAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACACGGGGTGGGCCCTTCTaGCTCGGGCCTCACAAGCGT +
Preference number: 4 (lower is better)
Translates to: TGKSIDERGHNYRDVPYTRGGPF*LGPHKR
Trigger: ACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCG...TGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTCAAGAAGTGTCTAGGTaGAAATCTCCCCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFQEVSR*KSPLTQ
Trigger: TTGGGTGAGGGGAGATTTGCACCTAGACACTTCTTG...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GAGAAGTCATTTCCCTTCTCTGGTCCTGAGAGCAGCAGGCTGCTCTATCCACAAAGAGATGCCAGGAACTaGCAATTTCCCTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: EKSFPFSGPESSRLLYPQRDARN*QFPSTP
Trigger: AGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCT...TTGTGGATAGAGCAGCCTGCTGCTCTCAGGACCAGAGAAGGGAAATGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGGATCAGATAAGTCCGTaGATGCAAGGCACCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQDQISP*MQGTQH
Trigger: GTGCTGGGTGCCTTGCATGCACGGACTTATCTGATC...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCGGGAAGAACAATATTTaGTCTACCTTTGTCACGGGG +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPGKNNI*STFVTG
Trigger: CCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCC...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp GCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCAGGAGGACAGCTCTGGGGAAGAACAATATTTaGTCTACCTTTGTCACGGGG +
Preference number: 4 (lower is better)
Translates to: AAFEPLEQGHSGARRTALGKNNI*STFVTG
Trigger: CCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCC...CAGAGCTGTCCTCCTGGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp CAAGAGGGCTCACTTGTGAAACTGAGTGTCTCCTTTCAAGAAGTGTCTAGGTGCTCCAGCAATGAGTCTTaGCAAGCCTTGGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QEGSLVKLSVSFQEVSRCSSNES*QALGPS
Trigger: GCTGGGCCCCAAGGCTTGCCAAGACTCATTGCTGGA...GCACCTAGACACTTCTTGAAAGGAGACACTCAGTTTCACAAGTGAGCCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GTCACTTTGGTTTCTGACTCCACCCTTCTTCTGGTAGTGAGGCCAAGTGGCTGTTTTTCTGCGCCGAAGTaGGAGGCTAATCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VTLVSDSTLLLVVRPSGCFSAPK*EANLWV
Trigger: GACCCAGAGATTAGCCTCCCACTTCGGCGCAGAAAA...ACAGCCACTTGGCCTCACTACCAGAAGAAGGGTGGAGTCAGAAACCAAAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GCAAAACCCTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTTGGATGGGTATTGCCTaGTGCCCATGGTTGCATGCC +
Preference number: 4 (lower is better)
Translates to: AKPFMAGGLCPSLTYLKFWMGIA*CPWLHA
Trigger: GGCATGCAACCATGGGCACCAGGCAATACCCATCCA...AAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTACTTATACAGCAGGCTaGAGAGGGAAGGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFTYTAG*RGKERM
Trigger: CATTCTCTCCTTCCCTCTCCAGCCTGCTGTATAAGT...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GTCACTTTGGTTTCTGACTCCACCCTTCTTCTGGTAGTGAGGCCAAGTGGCTGTCCAGGAGGACAGCTCTaGAGGTCACTTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VTLVSDSTLLLVVRPSGCPGGQL*RSLWFL
Trigger: CAGAAACCAAAGTGACCTCCAGAGCTGTCCTCCTGG...ACAGCCACTTGGCCTCACTACCAGAAGAAGGGTGGAGTCAGAAACCAAAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCCCTCTGACTCCAATCTaGGCAATAGAGGCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPPLTPI*AIEARN
Trigger: ATTTCTAGCCTCTATTGCCCAGATTGGAGTCAGAGG...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTATTTCCCTCCACCCCTaGAGTTCCATCACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFISLHP*SSITWN
Trigger: ATTCCAAGTGATGGAACTCCAGGGGTGGAGGGAAAT...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GCAAAACCCTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTACCCAGCACAGCAGCTaGTACACAAGAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: AKPFMAGGLCPSLTYLKFTQHSS*YTRDAR
Trigger: CCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGT...AAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp CTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCACCCCTGGAGTTCCAAGAGAACTTGGGGATaGACACACTTGCACACTAGT +
Preference number: 4 (lower is better)
Translates to: LVHKRCQELPISLHPWSSKRTWG*THLHTS
Trigger: ACTAGTGTGCAAGTGTGTTCATCCCCAAGTTCTCTT...GGAACTCCAGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTATATGCAGAGCAGTTaGAGGAAGGTAGATAGGAGA +
Preference number: 4 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPYMQSS*RKVDRR
Trigger: TCTCCTATCTACCTTCCTTCAACTGCTCTGCATATA...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGCTCTTACCACCCACCTaGCTCCCTCCCCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: RDVPYTLSFLDGSRREKELLPPT*LPPQLS
Trigger: ACTGAGCTGGGGAGGGAGGCAGGTGGGTGGTAAGAG...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp CTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTGAGCATCAGACTGCATCAGACTCCTTCTaGATCCTTCCCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLCFGHQRKEVRDVEHQTASDSF*ILPPGS
Trigger: GCTTCCTGGGGGAAGGATGCAGAAGGAGTCTGATGC...AGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GCAAAACCCTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTGGGCTCATAGCTCACTaGCTTGCTGCCTTTGAACCT +
Preference number: 4 (lower is better)
Translates to: AKPFMAGGLCPSLTYLKFGLIAH*LAAFEP
Trigger: AGGTTCAAAGGCAGCAAGGCAGTGAGCTATGAGCCC...AAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACTCCACAGTCACCGCCTaGCCAGCCGTCGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHSTVTA*PAVVLL
Trigger: CAACAGCACGACGGCTGGCCAGGCGGTGACTGTGGA...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGTGGATCCCAAGGAGGTaGCCCAGGGCCACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RDVPYTLSFLDGSRREKEWIPRR*PRATEK
Trigger: CTTCTCTGTGGCCCTGGGCCACCTCCTTGGGATCCA...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp TCTGTCTGGTTTGGTGTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAGGAACAGAGATTCCTaGGGTGGAAAAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVWFGVCDLCSLTDRVLLRNRDS*GGKAAA
Trigger: GGCAGCAGCTTTTCCACCCCAGGAATCTCTGTTCCT...TAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACACACCAAACCAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGGGGATCACGGGCTGTaGAGAGGCAGACAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RDVPYTLSFLDGSRREKEGDHGL*RGRQRR
Trigger: CCTTCTCTGTCTGCCTCTCCACAGCCCGTGATCCCC...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp TCTTTGGCCACCAAAGATTTCCTTTTTCCAGAGGCCATGTCTAGGGGAGCTGTTGAGGGAAGGAGAGAATaGATAGGGCTGGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SLATKDFLFPEAMSRGAVEGRRE*IGLGGR
Trigger: CCTACCACCCAGCCCTATCCATTCTCTCCTTCCCTC...AACAGCTCCCCTAGACATGGCCTCTGGAAAAAGGAAATCTTTGGTGGCCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp CACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCCTCAAAGAGAGCTTTaGTCAAGGAAGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HPAQQLVHKRCQELPISLPQREL*SRKTGK
Trigger: CTTTCCTGTCTTCCTTGACCAAAGCTCTCTTTGAGG...GAGGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTCCTCTGACTCCAATCTaGGCAATAGAGGCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFPLTPI*AIEARN
Trigger: ATTTCTAGCCTCTATTGCCCAGATTGGAGTCAGAGG...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp AGGTGGGGGAAATTTTCCAGGAGGAGCCAGATTGCGGCTGGAAATCAAGGCCCTTTGTGTAAAAAGGTCTaGGTTCAAGTGTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RWGKFSRRSQIAAGNQGPLCKKV*VQVLAP
Trigger: TGGAGCCAACACTTGAACTCAGACCTTTTTACACAA...AGGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGGAAAATTTCCCCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp CAAGAGGGCTCACTTGTGAAACTGAGTGTCTCCTTTCAAGAAGTGTCTAGGTGCGGGCTCATAGCTCACTaGCTTGCTGCCTTTGAACCT +
Preference number: 4 (lower is better)
Translates to: QEGSLVKLSVSFQEVSRCGLIAH*LAAFEP
Trigger: AGGTTCAAAGGCAGCAAGGCAGTGAGCTATGAGCCC...GCACCTAGACACTTCTTGAAAGGAGACACTCAGTTTCACAAGTGAGCCCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGGGGTGGGGATGAGGTaGCTGAGACACATCCATGCT +
Preference number: 4 (lower is better)
Translates to: RDVPYTLSFLDGSRREKEGVGMR*LRHIHA
Trigger: AGCATGGATGTGTCTCAGGCACCTCATCCCCACCCC...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp TTGGGGGTTTGGGAGAGTCCTCTCCATAGCACATATGGCCCAGGGCAGCCTTTTTCTGAGTTCAAGTGTTaGCTCCACCATATACTACCT +
Preference number: 4 (lower is better)
Translates to: LGVWESPLHSTYGPGQPFSEFKC*LHHILP
Trigger: AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGA...AAAAGGCTGCCCTGGGCCATATGTGCTATGGAGAGGACTCTCCCAAACCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGTCATTTGGCACAAAGTaGGAGTATGGGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQSFGTK*EYGTAQ
Trigger: CTGAGCTGTCCCATACTCCCACTTTGTGCCAAATGA...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTGGATGTCTGCTGGCGTaGTCTCATGGAGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPGCLLA*SHGAER
Trigger: CCGCTCTGCTCCATGAGATCACGCCAGCAGACATCC...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp CCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGCTAGAGACAAGTTCCCAGTTCCCTaGAAAAGGCTGGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PYTLSFLDGSRREKEARDKFPVP*KRLEKP
Trigger: TGGCTTCTCCAGCCTTTTTCAGGGAACTGGGAACTT...GTCTCTAGCCTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp GTCACTTTGGTTTCTGACTCCACCCTTCTTCTGGTAGTGAGGCCAAGTGGCTGTAGGAAAGAGCATAGATaGGAGGGGACACAATTACAG +
Preference number: 4 (lower is better)
Translates to: VTLVSDSTLLLVVRPSGCRKEHR*EGTQLQ
Trigger: CTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCT...ACAGCCACTTGGCCTCACTACCAGAAGAAGGGTGGAGTCAGAAACCAAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp TTCTTGGATGGGAGCAGAAGGGAGAAAGAGGCTAGAGACTTAGTGCCTGGGTGCTTGTGTAAAAAGGTCTaGGTTCAAGTGTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FLDGSRREKEARDLVPGCLCKKV*VQVLAP
Trigger: TGGAGCCAACACTTGAACTCAGACCTTTTTACACAA...GCACCCAGGCACTAAGTCTCTAGCCTCTTTCTCCCTTCTGCTCCCATCCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551526.5
CDS-3UTR GCA 90 bp TCTGTCTGGTTTGGTGTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTACCCACACTCATCCACTaGAGGAGAAGCGGATTTATT +
Preference number: 4 (lower is better)
Translates to: SVWFGVCDLCSLTDRVLLPTLIH*RRSGFI
Trigger: AATAAATCCGCTTCTCCTGCAGTGGATGAGTGTGGG...TAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACACACCAAACCAGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GACTCCTTCTGCATCCTTCCCCCAGGAAGCAGAAATAATGAAATGATTCTAGTACAGGAGGAGCCAGATTaGGGCTGGAAATCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: DSFCILPPGSRNNEMILVQEEPD*GWKSRP
Trigger: GGGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTG...TACTAGAATCATTTCATTATTTCTGCTTCCTGGGGGAAGGATGCAGAAGGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTGCTCCGACAGGCTCTTaGCTGGCGGAAACAGCACGT +
Preference number: 4 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPAPTGS*LAETAR
Trigger: ACGTGCTGTTTCCGCCAGCCAAGAGCCTGTCGGAGC...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCTCTGAGTTCAAGTGTTaGCTCCACCATATACTACCT +
Preference number: 4 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGASEFKC*LHHILP
Trigger: AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGA...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
3UTR CAA 72 bp ACGACATTGAAGCACCATTTGCAGGTGCAAAGTCATTaGGCACAAAGTGGGAGTATGGGACAGCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: TTLKHHLQVQSH*AQSGSMGQLRT
Trigger: GGTTCTGAGCTGTCCCATACTCCCACTTTGTGCCAAATGACTTTGCACCTGCAAATGGTGCTTCAATGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GCAAAACCCTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTGATACAAAACGACATTaGAGCACCATTTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AKPFMAGGLCPSLTYLKFDTKRH*STICRC
Trigger: GCACCTGCAAATGGTGCTTCAATGTCGTTTTGTATC...AAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGAGAGATGCCAGGAACTaGCAATTTCCCTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: RDVPYTLSFLDGSRREKERDARN*QFPSTP
Trigger: AGGGGTGGAGGGAAATTGGCAGTTCCTGGCATCTCT...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp AAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACACTGTCTCTGCGAACACAGCCCTaGAGAAGGCTATGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: KSIDERGHNYRDVPYTLSLRTQP*RRLWSG
Trigger: TCCGCTCCATAGCCTTCTCCAGGGCTGTGTTCGCAG...AGACAGTGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp CTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTGAGCATCAGACTGACTCTCCTTTGCTTTaGCCATCAACGAAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLCFGHQRKEVRDVEHQTDSPLL*PSTKGG
Trigger: ACCTCCTTTCGTTGATGGCCAAAGCAAAGGAGAGTC...AGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTCTCTACCTCCAGCAATaGGTCTTGGCAAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPLYLQQ*VLASLG
Trigger: CCCAAGGCTTGCCAAGACTCATTGCTGGAGGTAGAG...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTGAGCCTGTACCAGGGTaGCAATACCCAAGCCAAACG +
Preference number: 4 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPEPVPG*QYPSQT
Trigger: CGTTTGGCTTGGGTATTGGCACCCTGGTACAGGCTC...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACGCGTGCGCACTCATATaGCTGCTTCCTCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHACALI*LLPLWR
Trigger: TCTCCAAAGAGGAAGCAGGCATATGAGTGCGCACGC...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TTACAGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAACACACGTGAAGGCGTaGGCACTCATATGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQRCSLYTVFLGWEQKGETHVKA*ALICLL
Trigger: AAGCAGGCATATGAGTGCGCACGCCTTCACGTGTGT...TTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACAAACCCATCTCCTTCTaGCTGGATCTTGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHKPISF*LDLVGS
Trigger: GGAGCCCACAAGATCCAGGCAGAAGGAGATGGGTTT...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp TTACAGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAGATCAGATAAGTCCGTaGATGCAAGGCACCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LQRCSLYTVFLGWEQKGEDQISP*MQGTQH
Trigger: GTGCTGGGTGCCTTGCATGCACGGACTTATCTGATC...TTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp ACAGGAAAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACATCTAGAGGAGTTTGTTaGGGTGAGGTGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TGKSIDERGHNYRDVPYTSRGVC*GEVGWG
Trigger: TCCCCACCCCACCTCACCCCAACAAACTCCTCTAGA...TGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR TCA 90 bp ACAGGAAAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACACTGCCTTGCTGCCTTTaGACCTCTAGAGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: TGKSIDERGHNYRDVPYTLPCCL*TSRART
Trigger: TGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAG...TGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTCCAGCCATGCACACTTaGACCAACGTAGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPPAMHT*TNVGKP
Trigger: AGGTTTGCCTACGTTGGTGCAAGTGTGCATGGCTGG...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTCTGGTGCACAGTGGGTaGTTGGTGCAGTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPLVHSG*LVQCEI
Trigger: TATCTCACACTGCACCAAGCACCCACTGTGCACCAG...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CCA 90 bp ACAGGAAAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACAGCTGTCACTAGCTATTaGGGGTTTGGGAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGKSIDERGHNYRDVPYTAVTSY*GFGRVL
Trigger: GAGGACTCTCCCAAACCCCCAATAGCTAGTGACAGC...TGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTCCAGGAGGACAGCTCTaGAGGTCACTTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPPGGQL*RSLWFL
Trigger: CAGAAACCAAAGTGACCTCCAGAGCTGTCCTCCTGG...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CCA 90 bp CCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGCTAGAGACGGCTTACAGTCTAGCTaGGAGGCATTGTATATATAC +
Preference number: 4 (lower is better)
Translates to: PYTLSFLDGSRREKEARDGLQSS*EALYIY
Trigger: GTATATATACAATGCCTCCCAGCTAGACTGTAAGCC...GTCTCTAGCCTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR TCA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACAGGAAAGAGCATAGATaGGAGGGGACACAATTACAG +
Preference number: 4 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHRKEHR*EGTQLQ
Trigger: CTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCT...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp AAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACACTGTCTACTAGTAAAACCAGTTaGATCATTCCCGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: KSIDERGHNYRDVPYTLSTSKTS*IIPGTP
Trigger: GGGGGTTCCGGGAATGATGCAACTGGTTTTACTAGT...AGACAGTGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR GCA 90 bp ACAGGAAAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACACTGGTACACAAGAGATaGCAGGAACTGCCAATTTCC +
Preference number: 4 (lower is better)
Translates to: TGKSIDERGHNYRDVPYTLVHKR*QELPIS
Trigger: GGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAG...TGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR GCA 90 bp TTACAGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAGGGGATGAACACACTTaGACACTAGTAAAACCAGTT +
Preference number: 4 (lower is better)
Translates to: LQRCSLYTVFLGWEQKGEGDEHT*TLVKPV
Trigger: AACTGGTTTTACTAGTGTGCAAGTGTGTTCATCCCC...TTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS GCA 90 bp GAGGCCGCTGGCGGCCCTCAGGCCTTGGTACCCCGTGGCAGGCTCTaGGGCGAGTGCAGCTCCACCGACTGCCGCCGTCGCACCTCGCGC +
Preference number: 5 (lower is better)
Translates to: EAAGGPQALVPRGRL*GECSSTDCRRRTSR
Trigger: GCGCGAGGTGCGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCCAGCGGCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 90 bp CGGGGCCGTAGAGGCCGCTGGCGGCCCTCAGGCCTTGGTACCCCGTaGCAGGCTCTGCGGCGAGTGCAGCTCCACCGACTGCCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: RGRRGRWRPSGLGTP*QALRRVQLHRLPPS
Trigger: CGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCCAGCGGCCTCTACGGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS GCA 90 bp GGCGGCCCTCAGGCCTTGGTACCCCGTGGCAGGCTCTGCGGCGAGTaGAGCTCCACCGACTGCCGCCGTCGCACCTCGCGCTCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: GGPQALVPRGRLCGE*SSTDCRRRTSRSSQ
Trigger: TTGGGAGGAGCGCGAGGTGCGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 90 bp TCTGCCTCGGGCCTCACAAGCGTCCGTCGGGGCCGTAGAGGCCGCTaGCGGCCCTCAGGCCTTGGTACCCCGTGGCAGGCTCTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: SASGLTSVRRGRRGR*RPSGLGTPWQALRR
Trigger: TCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCCAGCGGCCTCTACGGCCCCGACGGACGCTTGTGAGGCCCGAGGCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS GCA 90 bp TTGGTACCCCGTGGCAGGCTCTGCGGCGAGTGCAGCTCCACCGACTaGCGCCGTCGCACCTCGCGCTCCTCCCAATCGGTGTCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LVPRGRLCGECSSTD*RRRTSRSSQSVSGS
Trigger: GGAGCCGGACACCGATTGGGAGGAGCGCGAGGTGCGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS GCA 90 bp CTCGCGCTCCTCCCAATCGGTGTCCGGCTCCAGGCCCTTCAGCACTaGCAGGCGCTCCGACAGGCTCTTGGCTGGCGGAAACAGCACGTA +
Preference number: 5 (lower is better)
Translates to: LALLPIGVRLQALQH*QALRQALGWRKQHV
Trigger: TACGTGCTGTTTCCGCCAGCCAAGAGCCTGTCGGAGCGCCTGGCAGTGCTGAAGGGCCTGGAGCCGGACACCGATTGGGAGGAGCGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS GCA 90 bp CGTGCTGTTGCTGAGAGCATTGACAGCCAGGTCCCCGCGGATGTCTaGTGGCGTGATCTCATGGAGCAGAGCGGCTCCGGCCACAGCCCC +
Preference number: 5 (lower is better)
Translates to: RAVAESIDSQVPADV*WRDLMEQSGSGHSP
Trigger: GGGGCTGTGGCCGGAGCCGCTCTGCTCCATGAGATCACGCCAGCAGACATCCGCGGGGACCTGGCTGTCAATGCTCTCAGCAACAGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000199280.4
ENST00000550862.1
ENST00000551526.5
CDS CCA 90 bp GCTGTTGCTGAGAGCATTGACAGCCAGGTCCCCGCGGATGTCTGCTaGCGTGATCTCATGGAGCAGAGCGGCTCCGGCCACAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: AVAESIDSQVPADVC*RDLMEQSGSGHSPQ
Trigger: CTGGGGGCTGTGGCCGGAGCCGCTCTGCTCCATGAGATCACGCCAGCAGACATCCGCGGGGACCTGGCTGTCAATGCTCTCAGCAACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000199280.4
ENST00000550862.1
ENST00000551526.5
CDS CCA 90 bp CCGGCTCCAGGCCCTTCAGCACTGCCAGGCGCTCCGACAGGCTCTTaGCTGGCGGAAACAGCACGTAGTTGTAGAGGAGGGAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PAPGPSALPGAPTGS*LAETARSCRGGSPG
Trigger: TCCTGGGCTCCCTCCTCTACAACTACGTGCTGTTTCCGCCAGCCAAGAGCCTGTCGGAGCGCCTGGCAGTGCTGAAGGGCCTGGAGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 90 bp CTCCAGGCCCTTCAGCACTGCCAGGCGCTCCGACAGGCTCTTGGCTaGCGGAAACAGCACGTAGTTGTAGAGGAGGGAGCCCAGGATGGC +
Preference number: 5 (lower is better)
Translates to: LQALQHCQALRQALG*RKQHVVVEEGAQDG
Trigger: GCCATCCTGGGCTCCCTCCTCTACAACTACGTGCTGTTTCCGCCAGCCAAGAGCCTGTCGGAGCGCCTGGCAGTGCTGAAGGGCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp AGGAGGGACGGGGTGGGCCCTTCTGCCTCGGGCCTCACAAGCGTCCGTCGGGGCCAGTGGTCATCAAATTaGCCAGTGACGACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: RRDGVGPSASGLTSVRRGQWSSN*PVTTAG
Trigger: TCCAGCTGTCGTCACTGGCAAATTTGATGACCACTG...GCCCCGACGGACGCTTGTGAGGCCCGAGGCAGAAGGGCCCACCCCGTCCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp GCCCATGGTTGCATGCCTGAGCGCCTTGCCCAGCCAGCCATAGGTGTGTGCTGGCTGCAAGACAGTGGGTaGGGCTGGAAAGGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: AHGCMPERLAQPAIGVCWLQDSG*GWKGPA
Trigger: GGCTGGGCCTTTCCAGCCCAACCCACTGTCTTGCAG...CCAGCACACACCTATGGCTGGCTGGGCAAGGCGCTCAGGCATGCAACCATGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp CTAGGTGCAAATCTCCCCTCACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTCGCTCCGACAGGCTCTaGGCTGGCGGAAACAGCACG +
Preference number: 5 (lower is better)
Translates to: LGANLPSPKTKARVPQRARSDRL*AGGNST
Trigger: CGTGCTGTTTCCGCCAGCCAAGAGCCTGTCGGAGCG...AGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 90 bp TGGCTGGCGGAAACAGCACGTAGTTGTAGAGGAGGGAGCCCAGGATaGCGCCCACCAGGGGTCCGATCCAGAAGACCCAGTGGTCATCAA +
Preference number: 5 (lower is better)
Translates to: WLAETARSCRGGSPG*RPPGVRSRRPSGHQ
Trigger: TTGATGACCACTGGGTCTTCTGGATCGGACCCCTGGTGGGCGCCATCCTGGGCTCCCTCCTCTACAACTACGTGCTGTTTCCGCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCCCAGCCGTCGTGCTGTaGCTGAGAGCATTGACAGCC +
Preference number: 5 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPPAVVL*LRALTA
Trigger: GGCTGTCAATGCTCTCAGCAACAGCACGACGGCTGG...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp TCCAGTGGTAGGAGCCAGAAGCAGGGGATCACGGGCTGTGGAGAGGCAGACAGAGGAGAAGCGGATTTATaGCAGGTTGGGGAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SSGRSQKQGITGCGEADRGEADL*QVGEEG
Trigger: CCCTTCCTCCCCAACCTGCAATAAATCCGCTTCTCC...TCTGTCTGCCTCTCCACAGCCCGTGATCCCCTGCTTCTGGCTCCTACCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp CTAGGTGCAAATCTCCCCTCACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTGGTGATGGATGGGTATaGCCTGGTGCCCATGGTTGC +
Preference number: 5 (lower is better)
Translates to: LGANLPSPKTKARVPQRAGDGWV*PGAHGC
Trigger: GCAACCATGGGCACCAGGCAATACCCATCCATCACC...AGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGTGAGGGGAGATTTGCACCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 90 bp TCTGTGTATGTGTCCCTCTTGGGGTCTCTGTGTCTGTCTCTGGAGTaGTCTGTGTGTCTGTTCCTCCAGGGAGGCTGGAACCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: SVYVSLLGSLCLSLE*SVCLFLQGGWNPWP
Trigger: TGGCCATGGGTTCCAGCCTCCCTGGAGGAACAGACACACAGACCACTCCAGAGACAGACACAGAGACCCCAAGAGGGACACATACACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550862.1
CDS-3UTR CAA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCCCAGGAGGAGCCAGATaGCGGCTGGAAATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGAPGGAR*RLEIKA
Trigger: GGCCTTGATTTCCAGCCGCAATCTGGCTCCTCCTGG...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTCCAGCCCCACATTCTTaGTCCTCTCTACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSPAPHS*SSLPCC
Trigger: GCAGCAGGGTAGAGAGGACAAAGAATGTGGGGCTGG...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp TCTGTCTGGTTTGGTGTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTACTGTTGCTGAGAGCATaGACAGCCAGGTCCCCGCGG +
Preference number: 5 (lower is better)
Translates to: SVWFGVCDLCSLTDRVLLLLLRA*TARSPR
Trigger: CCGCGGGGACCTGGCTGTCAATGCTCTCAGCAACAG...TAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACACACCAAACCAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTCCCACAAAGGGCTTTaGTTTTCTGCGCCGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPSHKGL*FSAPKW
Trigger: CCACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGA...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCGTGCACAGTGGGTGCTaGGTGCAGTGTGAGATAGAT +
Preference number: 5 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPVHSGC*VQCEID
Trigger: ATCTATCTCACACTGCACCAAGCACCCACTGTGCAC...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp TGCTGCCCTCGCCAAGGCTCTCCGTCCACTGCAAGACAGTGGGTTGGGCTGGAAACCTCAAAGAGAGCTTaGGTCAAGGAAGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: CCPRQGSPSTARQWVGLETSKRA*VKEDRK
Trigger: TTTCCTGTCTTCCTTGACCAAAGCTCTCTTTGAGGT...TTCCAGCCCAACCCACTGTCTTGCAGTGGACGGAGAGCCTTGGCGAGGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCGCTCTGGAGGTCACTTaGGTTTCTGACTCCACCCTT +
Preference number: 5 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPALEVT*VSDSTL
Trigger: AAGGGTGGAGTCAGAAACCAAAGTGACCTCCAGAGC...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp AAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACACTGTCTGGCGGCCCTCAGGCCTaGGTACCCCGTGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: KSIDERGHNYRDVPYTLSGGPQA*VPRGRL
Trigger: GAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCC...AGACAGTGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp ACCCAAGACAAAGGCCCGGGTCCCACAAAGGGCTTTTGTTTTCTGCGCCGAAGTGCTCTGGAGGTCACTTaGGTTTCTGACTCCACCCTT +
Preference number: 5 (lower is better)
Translates to: TQDKGPGPTKGFCFLRRSALEVT*VSDSTL
Trigger: AAGGGTGGAGTCAGAAACCAAAGTGACCTCCAGAGC...ACTTCGGCGCAGAAAACAAAAGCCCTTTGTGGGACCCGGGCCTTTGTCTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCCATGGCTGGGGGCCTTaGTCCTTCCCTAACCTATCT +
Preference number: 5 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGAHGWGP*SFPNLS
Trigger: AGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATG...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS CCA 90 bp CTGGGGTGTCTGTTCCTCTTGAGAGTTCTGTGTATGTGTCCCTCTTaGGGTCTCTGTGTCTGTCTCTGGAGTGGTCTGTGTGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LGCLFLLRVLCMCPS*GLCVCLWSGLCVCS
Trigger: GGAACAGACACACAGACCACTCCAGAGACAGACACAGAGACCCCAAGAGGGACACATACACAGAACTCTCAAGAGGAACAGACACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550862.1
CDS-3UTR CAA 90 bp CTCCTTTGCTTTGGCCATCAACGAAAGGAGGTAAGGGATGTTGAGCATCAGACTCCAGCCGTCGTGCTGTaGCTGAGAGCATTGACAGCC +
Preference number: 5 (lower is better)
Translates to: LLCFGHQRKEVRDVEHQTPAVVL*LRALTA
Trigger: GGCTGTCAATGCTCTCAGCAACAGCACGACGGCTGG...AGTCTGATGCTCAACATCCCTTACCTCCTTTCGTTGATGGCCAAAGCAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp GCAAAACCCTTCATGGCTGGGGGCCTTTGTCCTTCCCTAACCTATCTGAAGTTTCCCAGCCATGCACACTaGCACCAACGTAGGCAAACC +
Preference number: 5 (lower is better)
Translates to: AKPFMAGGLCPSLTYLKFPSHAH*HQRRQT
Trigger: GGTTTGCCTACGTTGGTGCAAGTGTGCATGGCTGGG...AAACTTCAGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATGAAGGGTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCGGACTCTCCTTTGCTTaGGCCATCAACGAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGAGLSFA*AINERR
Trigger: CCTCCTTTCGTTGATGGCCAAAGCAAAGGAGAGTCC...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp GGCACCCAGCACAGCAGCTGGTACACAAGAGATGCCAGGAACTGCCAATTTCCCTATACACTGTCTTTCTaGGATGGGAGCAGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: GTQHSSWYTRDARNCQFPYTLSF*DGSRRE
Trigger: CTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATA...GGGAAATTGGCAGTTCCTGGCATCTCTTGTGTACCAGCTGCTGTGCTGGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACCTGTTGCTGAGAGCATaGACAGCCAGGTCCCCGCGG +
Preference number: 5 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHLLLRA*TARSPR
Trigger: CCGCGGGGACCTGGCTGTCAATGCTCTCAGCAACAG...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp AAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACACTGTCTGAGTCTTGGCAAGCCTaGGGGCCCAGCGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: KSIDERGHNYRDVPYTLSESWQA*GPSAAG
Trigger: ACCTGCAGCGCTGGGCCCCAAGGCTTGCCAAGACTC...AGACAGTGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp GTGTGTGATCTCTGTTCTCTGACTGACCGGGTGCTCTTAAAGGGCAGAAACCAGTCCCAGGACTCTCCTTaGCTTTGGCCATCAACGAAA +
Preference number: 5 (lower is better)
Translates to: VCDLCSLTDRVLLKGRNQSQDSP*LWPSTK
Trigger: TTTCGTTGATGGCCAAAGCAAAGGAGAGTCCTGGGA...CTGGTTTCTGCCCTTTAAGAGCACCCGGTCAGTCAGAGAACAGAGATCACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACCCTTCTGCCTGGATCTaGTGGGCTCCCAGGACTCTC +
Preference number: 5 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHPSAWI*WAPRTL
Trigger: GAGAGTCCTGGGAGCCCACAAGATCCAGGCAGAAGG...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCACCTCAAAGAGAGCTTaGGTCAAGGAAGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGATSKRA*VKEDRK
Trigger: TTTCCTGTCTTCCTTGACCAAAGCTCTCTTTGAGGT...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp ATAGCTCACTGCCTTGCTGCCTTTGAACCTCTAGAGCAAGGACACTCAGGTGCCTGGGAAGAACAATATTaGCTCTACCTTTGTCACGGG +
Preference number: 5 (lower is better)
Translates to: IAHCLAAFEPLEQGHSGAWEEQY*LYLCHG
Trigger: CCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCA...GGCACCTGAGTGTCCTTGCTCTAGAGGTTCAAAGGCAGCAAGGCAGTGAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp CCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGCTAGAGACATACAGACAGAAGTCTaGAAGGCATGGAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: PYTLSFLDGSRREKEARDIQTEV*KAWRPQ
Trigger: CTGTGGCCTCCATGCCTTCAAGACTTCTGTCTGTAT...GTCTCTAGCCTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp AGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGCATGGCTGGGGGCCTTaGTCCTTCCCTAACCTATCT +
Preference number: 5 (lower is better)
Translates to: RDVPYTLSFLDGSRREKEHGWGP*SFPNLS
Trigger: AGATAGGTTAGGGAAGGACAAAGGCCCCCAGCCATG...CTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp CCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGCTAGAGACTGGGAAGAACAATATTaGCTCTACCTTTGTCACGGG +
Preference number: 5 (lower is better)
Translates to: PYTLSFLDGSRREKEARDWEEQY*LYLCHG
Trigger: CCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCA...GTCTCTAGCCTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp CCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAAGAGGCTAGAGACACCAGTCCCTTAGCCTaGGTTTCTGAATCTGTAAAA +
Preference number: 5 (lower is better)
Translates to: PYTLSFLDGSRREKEARDTSPLA*VSESVK
Trigger: TTTTACAGATTCAGAAACCAAGGCTAAGGGACTGGT...GTCTCTAGCCTCTTTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp AATGGGAAGAACAATATTTGCTCTACCTTTGTCACGGGGTTGGGAGATAATCACCTGCCTCTGTCTGGTTaGGTGTGTGTGATCTCTGTT +
Preference number: 5 (lower is better)
Translates to: NGKNNICSTFVTGLGDNHLPLSG*VCVISV
Trigger: AACAGAGATCACACACACCAAACCAGACAGAGGCAG...GTGATTATCTCCCAACCCCGTGACAAAGGTAGAGCAAATATTGTTCTTCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp ACAGGAAAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACATATACACTGTCTTTCTaGGATGGGAGCAGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: TGKSIDERGHNYRDVPYTYTLSF*DGSRRE
Trigger: CTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATA...TGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS-3UTR CAA 90 bp GGATTTTGTGTAAAAAGGTCTGAGTTCAAGTGTTGGCTCCACCATATACTACCTCAGGTGCAAAGTCATTaGGCACAAAGTGGGAGTATG +
Preference number: 5 (lower is better)
Translates to: GFCVKRSEFKCWLHHILPQVQSH*AQSGSM
Trigger: CATACTCCCACTTTGTGCCAAATGACTTTGCACCTG...AGGTAGTATATGGTGGAGCCAACACTTGAACTCAGACCTTTTTACACAAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp ACAGGAAAGAGCATAGATGAGAGGGGACACAATTACAGAGATGTTCCTTATACAAGGACAAAAGAGAACTaGGGGATGAACACACTTGCA +
Preference number: 5 (lower is better)
Translates to: TGKSIDERGHNYRDVPYTRTKEN*GMNTLA
Trigger: TGCAAGTGTGTTCATCCCCAAGTTCTCTTTTGTCCT...TGTATAAGGAACATCTCTGTAATTGTGTCCCCTCTCATCTATGCTCTTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS-3UTR CAA 90 bp TTACAGAGATGTTCCTTATACACTGTCTTTCTTGGATGGGAGCAGAAGGGAGAAACCAGTCCCTTAGCCTaGGTTTCTGAATCTGTAAAA +
Preference number: 5 (lower is better)
Translates to: LQRCSLYTVFLGWEQKGETSPLA*VSESVK
Trigger: TTTTACAGATTCAGAAACCAAGGCTAAGGGACTGGT...TTCTCCCTTCTGCTCCCATCCAAGAAAGACAGTGTATAAGGAACATCTCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199280.4
ENST00000551526.5
CDS GCA 72 bp GGCGGCCCTCAGGCCTTGGTACCCCGTGGCAGGCTCTaGGGCGAGTGCAGCTCCACCGACTGCCGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: GGPQALVPRGRL*GECSSTDCRRR
Trigger: GCGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CAA 72 bp GTCGGGGCCGTAGAGGCCGCTGGCGGCCCTCAGGCCTaGGTACCCCGTGGCAGGCTCTGCGGCGAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: VGAVEAAGGPQA*VPRGRLCGECS
Trigger: GCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCCAGCGGCCTCTACGGCCCCGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS GCA 72 bp CAGGCCTTGGTACCCCGTGGCAGGCTCTGCGGCGAGTaGAGCTCCACCGACTGCCGCCGTCGCACCTCGCGC +
Preference number: 6 (lower is better)
Translates to: QALVPRGRLCGE*SSTDCRRRTSR
Trigger: GCGCGAGGTGCGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 72 bp GGCCTCACAAGCGTCCGTCGGGGCCGTAGAGGCCGCTaGCGGCCCTCAGGCCTTGGTACCCCGTGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: GLTSVRRGRRGR*RPSGLGTPWQA
Trigger: AGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCCAGCGGCCTCTACGGCCCCGACGGACGCTTGTGAGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CAA 90 bp CAAGCGTCCGTCGGGGCCGTAGAGGCCGCTGGCGGCCCTCAGGCCTaGGTACCCCGTGGCAGGCTCTGCGGCGAGTGCAGCTCCACCGAC +
Preference number: 6 (lower is better)
Translates to: QASVGAVEAAGGPQA*VPRGRLCGECSSTD
Trigger: GTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCCAGCGGCCTCTACGGCCCCGACGGACGCTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS GCA 72 bp CGTGGCAGGCTCTGCGGCGAGTGCAGCTCCACCGACTaGCGCCGTCGCACCTCGCGCTCCTCCCAATCGGTG +
Preference number: 6 (lower is better)
Translates to: RGRLCGECSSTD*RRRTSRSSQSV
Trigger: CACCGATTGGGAGGAGCGCGAGGTGCGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 72 bp AGAGGCCGCTGGCGGCCCTCAGGCCTTGGTACCCCGTaGCAGGCTCTGCGGCGAGTGCAGCTCCACCGACTG +
Preference number: 6 (lower is better)
Translates to: RGRWRPSGLGTP*QALRRVQLHRL
Trigger: CAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTGAGGGCCGCCAGCGGCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 72 bp GCCAGGTCCCCGCGGATGTCTGCTGGCGTGATCTCATaGAGCAGAGCGGCTCCGGCCACAGCCCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ARSPRMSAGVIS*SRAAPATAPSS
Trigger: GCTGCTGGGGGCTGTGGCCGGAGCCGCTCTGCTCCATGAGATCACGCCAGCAGACATCCGCGGGGACCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000199280.4
ENST00000550862.1
ENST00000551526.5
CDS GCA 72 bp CTCCCAATCGGTGTCCGGCTCCAGGCCCTTCAGCACTaGCAGGCGCTCCGACAGGCTCTTGGCTGGCGGAAA +
Preference number: 6 (lower is better)
Translates to: LPIGVRLQALQH*QALRQALGWRK
Trigger: TTTCCGCCAGCCAAGAGCCTGTCGGAGCGCCTGGCAGTGCTGAAGGGCCTGGAGCCGGACACCGATTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS GCA 72 bp GCTGAGAGCATTGACAGCCAGGTCCCCGCGGATGTCTaGTGGCGTGATCTCATGGAGCAGAGCGGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: AESIDSQVPADV*WRDLMEQSGSG
Trigger: GCCGGAGCCGCTCTGCTCCATGAGATCACGCCAGCAGACATCCGCGGGGACCTGGCTGTCAATGCTCTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000199280.4
ENST00000550862.1
ENST00000551526.5
CDS CCA 72 bp GAGAGCATTGACAGCCAGGTCCCCGCGGATGTCTGCTaGCGTGATCTCATGGAGCAGAGCGGCTCCGGCCAC +
Preference number: 6 (lower is better)
Translates to: ESIDSQVPADVC*RDLMEQSGSGH
Trigger: GTGGCCGGAGCCGCTCTGCTCCATGAGATCACGCCAGCAGACATCCGCGGGGACCTGGCTGTCAATGCTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000199280.4
ENST00000550862.1
ENST00000551526.5
CDS CCA 72 bp GGCCCTTCAGCACTGCCAGGCGCTCCGACAGGCTCTTaGCTGGCGGAAACAGCACGTAGTTGTAGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: GPSALPGAPTGS*LAETARSCRGG
Trigger: CCCTCCTCTACAACTACGTGCTGTTTCCGCCAGCCAAGAGCCTGTCGGAGCGCCTGGCAGTGCTGAAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 72 bp CTTCAGCACTGCCAGGCGCTCCGACAGGCTCTTGGCTaGCGGAAACAGCACGTAGTTGTAGAGGAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: LQHCQALRQALG*RKQHVVVEEGA
Trigger: GGCTCCCTCCTCTACAACTACGTGCTGTTTCCGCCAGCCAAGAGCCTGTCGGAGCGCCTGGCAGTGCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199280.4
CDS CCA 72 bp AGCTGCAGTGTCAGGAAGAGCTCCACAGTCACCGCCTaGCCAGCCGTCGTGCTGTTGCTGAGAGCATTGACA +
Preference number: 6 (lower is better)
Translates to: SCSVRKSSTVTA*PAVVLLLRALT
Trigger: TGTCAATGCTCTCAGCAACAGCACGACGGCTGGCCAGGCGGTGACTGTGGAGCTCTTCCTGACACTGCAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000199280.4
ENST00000550862.1
ENST00000551526.5
CDS CAA 90 bp TCTGGGGTGTCTGTTCCTCTTGAGAGTTCTGTGTATGTGTCCCTCTaGGGGTCTCTGTGTCTGTCTCTGGAGTGGTCTGTGTGTCTGTTC +
Preference number: 6 (lower is better)
Translates to: SGVSVPLESSVYVSL*GSLCLSLEWSVCLF
Trigger: GAACAGACACACAGACCACTCCAGAGACAGACACAGAGACCCCAAGAGGGACACATACACAGAACTCTCAAGAGGAACAGACACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550862.1