Pregenerated sensors for AQP11 (Homo sapiens)
Ensembl gene IDs: ENSG00000178301Ensembl transcript IDs: ENST00000313578.4, ENST00000528638.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCATATaGGGTGATAAAATCTTTATCACATCCAGCTGGACTGTCCTGTAT | + |
|
Preference number: 1 (lower is better) Translates to: RKLTLMNPVQPVFSI*GDKIFITSSWTVLY Trigger: ATACAGGACAGTCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| 3UTR TCA 90 bp | ATTCTACTTCTAAAAGCAACTTTCCTGTTGAAAGATGACACTGCTTaGTGGTATCATTTTGTGAGGTGGTGGCTGAAAGTATCCTCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: ILLLKATFLLKDDTA*WYHFVRWWLKVSSP Trigger: GGGAGAGGATACTTTCAGCCACCACCTCACAAAATGATACCATCAAGCAGTGTCATCTTTCAACAGGAAAGTTGCTTTTAGAAGTAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| 3UTR TCA 90 bp | GTGAATATATATTCTACTTCTAAAAGCAACTTTCCTGTTGAAAGATaGCACTGCTTGATGGTATCATTTTGTGAGGTGGTGGCTGAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: VNIYSTSKSNFPVER*HCLMVSFCEVVAES Trigger: ACTTTCAGCCACCACCTCACAAAATGATACCATCAAGCAGTGTCATCTTTCAACAGGAAAGTTGCTTTTAGAAGTAGAATATATATTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| 3UTR TCA 90 bp | TTAAAAATTCTGTTCATTTGGGTGACACTTGATACACAAATTCGTTaGTCTTACTATCACCTTTACTTCCCTTCTCATCCTGTACTCGTT | + |
|
Preference number: 1 (lower is better) Translates to: LKILFIWVTLDTQIR*SYYHLYFPSHPVLV Trigger: AACGAGTACAGGATGAGAAGGGAAGTAAAGGTGATAGTAAGATCAACGAATTTGTGTATCAAGTGTCACCCAAATGAACAGAATTTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| 3UTR-3UTR CCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTTTTATCACATCCAGCTaGACTGTCCTGTATGTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: SPLLPFSSCTRFSSKLTIFITSS*TVLYVS Trigger: ACTAACATACAGGACAGTCCAGCTGGATGTGATAAA...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| 3UTR TCA 72 bp | ACACTGATGAATCCAGTGCAGCCGGTGTTTTCCATATaGGGTGATAAAATCTTTATCACATCCAGCTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: TLMNPVQPVFSI*GDKIFITSSWT Trigger: AGTCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCACTGGATTCATCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCGGCCTGTGCAGCTGCTaGCGGGCGACTACGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSGLCSC*RATTRA Trigger: GGCCCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCC...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | ACTATAAGGCAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGCCAGCAGCGGCGACATaGCTCCGTCGCCGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TIRQLPQRKLTLMNPVQPPAAAT*LRRRLS Trigger: GCTCAGGCGGCGACGGAGCCATGTCGCCGCTGCTGG...CGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTGCCTTATAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | ACTATAAGGCAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGAGGTGCAGGTGTCCTaGAGCTCGGACCGGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TIRQLPQRKLTLMNPVQPEVQVS*SSDRSP Trigger: GGGGCTCCGGTCCGAGCTGCAGGACACCTGCACCTC...CGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTGCCTTATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | ACTATAAGGCAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGAGCGTCCAGGTGGGGTaGGCGGGGTGCTGTTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIRQLPQRKLTLMNPVQPSVQVG*AGCCSL Trigger: GAGCGAACAGCACCCCGCGCACCCCACCTGGACGCT...CGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTGCCTTATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | ACTATAAGGCAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGCCGTCTCGGGGGACATaGCCCCCAGCATCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TIRQLPQRKLTLMNPVQPPSRGT*PPASSA Trigger: TGCAGATGATGCTGGGGGGCATGTCCCCCGAGACGG...CGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTGCCTTATAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TGGCTGAAAGTATCCTCTCCCCAGTTCTGTAAGTTGACGCCTTGTACTTTTATAGTGGGGTGCGCGGGGTaGTGTTCGCTCAGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLKVSSPQFCKLTPCTFIVGCAG*CSLSSC Trigger: GCAACTGCTGAGCGAACAGCACCCCGCGCACCCCAC...TATAAAAGTACAAGGCGTCAACTTACAGAACTGGGGAGAGGATACTTTCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGATCACGCCGCACGGGTTaGTGGACGTGCCCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGSRRTG*WTCPPE Trigger: CTCTGGTGGGCACGTCCAGCAACCCGTGCGGCGTGA...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCTCCACAAGGCGCTTGTaGAGTACCTGCTGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSSTRRL*STCCTG Trigger: CCCTGTGCAGCAGGTACTGCACAAGCGCCTTGTGGA...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCAGTGCAGCCAGCAGGTaGATACGAAGCTTGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSSAASR*IRSLVR Trigger: CCGAACCAAGCTTCGTATCCACCTGCTGGCTGCACT...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTCGCGGGCCAGCCCCATaGGCAGCACCACCGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFSSCTRFSSKLTIRGPAP*AAPPTA Trigger: TGCTGTCGGTGGTGCTGCTCATGGGGCTGGCCCGCG...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTACCGGCCTGTGCAGCTaGTGCCGGGCGACTACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFSSCTRFSSKLTITGLCS*CRATTR Trigger: CCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCCGGT...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCTGGGCCACCGGCCTGTaGAGCTGCTGCCGGGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLLPFSSCTRFSSKLTIIWATGL*SCCRAT Trigger: AGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCA...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGAAGCAGTTGCAGCTCGTaGGTGCAGCAGCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGSSCSS*VQQQSW Trigger: CCAGCTCTGCTGCTGCACCCACGAGCTGCAACTGCT...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGAAGGGCACTAACCAGCTaGGCCAATAGCCTCACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGRALTS*ANSLTA Trigger: TGCGGTGAGGCTATTGGCTCAGCTGGTTAGTGCCCT...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGACGAAGCTCCTCTCGCTaGCGTGATACTGGGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGRSSSR*RDTGSD Trigger: GTCTGACCCAGTATCACGTCAGCGAGAGGAGCTTCG...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGATGTTCGCTCAGCAGTTaGAGCTCGTGGGTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGCSLSS*SSWVQQ Trigger: CTGCTGCACCCACGAGCTGCAACTGCTGAGCGAACA...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGACGGACTTCCTGGAAGTaGAGCAGAGCGCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGRTSWK*SRALWK Trigger: CTTCCACAGCGCTCTGCTGCACTTCCAGGAAGTCCG...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTTCCAGGACGAAGGCGTaGGCCACCGGCCTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFSSCTRFSSKLTISRTKA*ATGLCS Trigger: GCTGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGA...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | ACTATAAGGCAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGCAAGTCGACTCGGATaGGATTCTTGCAAGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TIRQLPQRKLTLMNPVQPASRLG*DSCKRS Trigger: GCTTCGCTTGCAAGAATCCCATCCGAGTCGACTTGC...CGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTGCCTTATAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCGTATTTGGCTCTATGTaGTCTAAGCCAGGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSVFGSM*SKPGQQ Trigger: TTGCTGCCCTGGCTTAGATCACATAGAGCCAAATAC...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TGGCTGAAAGTATCCTCTCCCCAGTTCTGTAAGTTGACGCCTTGTACTTTTATACTCGGATGGGATTCTTaGAAGCGAAGCTCCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WLKVSSPQFCKLTPCTFILGWDS*KRSSSR Trigger: GCGAGAGGAGCTTCGCTTGCAAGAATCCCATCCGAG...TATAAAAGTACAAGGCGTCAACTTACAGAACTGGGGAGAGGATACTTTCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCCGCCGCACGGGTTGCTaGACGTGCCCACCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLPFSSCTRFSSKLTIIRRTGC*TCPPES Trigger: TGACTCTGGTGGGCACGTCCAGCAACCCGTGCGGCG...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAAAGTATCCTCTCCCCAGTTCTGTAAGTTGACGCCTTGTACTTTTATATTGGTTCGGACTTCCTaGAAGTGCAGCAGAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLKVSSPQFCKLTPCTFILVRTS*KCSRAL Trigger: CAGCGCTCTGCTGCACTTCCAGGAAGTCCGAACCAA...TATAAAAGTACAAGGCGTCAACTTACAGAACTGGGGAGAGGATACTTTCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTTCAGTCCCAGCGAGGTaGAGGTGTCCTGCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFSSCTRFSSKLTISVPAR*RCPAAR Trigger: CCGAGCTGCAGGACACCTGCACCTCGCTGGGACTGA...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAAAGTATCCTCTCCCCAGTTCTGTAAGTTGACGCCTTGTACTTTTATAAGCAGAGCTGGAAGGTaGCTAGAAACTCCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: WLKVSSPQFCKLTPCTFISRAGR*LETPGR Trigger: TCGTCCTGGAGTTTCTAGCCACCTTCCAGCTCTGCT...TATAAAAGTACAAGGCGTCAACTTACAGAACTGGGGAGAGGATACTTTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTGTTGCAGCTCGTGGGTaGAGCAGCAGAGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFSSCTRFSSKLTIVAARG*SSRAGR Trigger: CCTTCCAGCTCTGCTGCTGCACCCACGAGCTGCAAC...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCACGGGTTGCTGGACGTaGCCACCAGAGTCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLPFSSCTRFSSKLTIITGCWT*PPESGH Trigger: ATGGCCTGACTCTGGTGGGCACGTCCAGCAACCCGT...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTCTCCTCTCGCTGACGTaGTACTGGGTCAGACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFSSCTRFSSKLTILLSLT*YWVRPK Trigger: CTTGGGTCTGACCCAGTATCACGTCAGCGAGAGGAG...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCTTTATCACATCCAGCTaGACTGTCCTGTATGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSFITSS*TVLYVS Trigger: ACTAACATACAGGACAGTCCAGCTGGATGTGATAAA...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCAAGGTAGCTAGCTGTTaGTTCAAAGGAGAATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSKVASC*FKGECE Trigger: TTCACATTCTCCTTTGAACCAACAGCTAGCTACCTT...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCTCCTGTATGTTAGTCTaGGTCTTTGGAACAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSSCMLV*VFGTVI Trigger: AATAACTGTTCCAAAGACTCAGACTAACATACAGGA...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGACGAAAGTGCCAAAGCTaGATTAAATACAGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGRKCQS*IKYSSC Trigger: ACAGGAGCTGTATTTAATCCAGCTTTGGCACTTTCG...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGACATTTGGGTGACACTTaGTACACAAATTCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGHLGDT*YTNSLI Trigger: GATCAACGAATTTGTGTATCAAGTGTCACCCAAATG...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGAAAGCAACTTTCCTGTTaGAAGATGACACTGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGKQLSC*KMTLLD Trigger: ATCAAGCAGTGTCATCTTTCAACAGGAAAGTTGCTT...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTGGTGGATACGAAGCTTaGTTCGGACTTCCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFSSCTRFSSKLTIGGYEA*FGLPGS Trigger: ACTTCCAGGAAGTCCGAACCAAGCTTCGTATCCACC...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGATATCATTTTGTGAGGTaGTGGCTGAAAGTATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGYHFVR*WLKVSS Trigger: AGAGGATACTTTCAGCCACCACCTCACAAAATGATA...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | TGGCTGAAAGTATCCTCTCCCCAGTTCTGTAAGTTGACGCCTTGTACTTTTATAAGAACAAGTCTTAACTaGGAAGTACAGAATACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLKVSSPQFCKLTPCTFIRTSLN*EVQNTS Trigger: TGAGGTATTCTGTACTTCTCAGTTAAGACTTGTTCT...TATAAAAGTACAAGGCGTCAACTTACAGAACTGGGGAGAGGATACTTTCAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | TGGCTGAAAGTATCCTCTCCCCAGTTCTGTAAGTTGACGCCTTGTACTTTTATATTCTGTTCATTTGGGTaGCACTTGATACACAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: WLKVSSPQFCKLTPCTFIFCSFG*HLIHKF Trigger: GAATTTGTGTATCAAGTGTCACCCAAATGAACAGAA...TATAAAAGTACAAGGCGTCAACTTACAGAACTGGGGAGAGGATACTTTCAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TGGCTGAAAGTATCCTCTCCCCAGTTCTGTAAGTTGACGCCTTGTACTTTTATAATTGTATGGTTGTTATaGAGCCATGGAAGGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLKVSSPQFCKLTPCTFIIVWLL*SHGRKK Trigger: CTTTTTCCTTCCATGGCTGCATAACAACCATACAAT...TATAAAAGTACAAGGCGTCAACTTACAGAACTGGGGAGAGGATACTTTCAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCTTTCCTGTTGAAAGATaGCACTGCTTGATGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLPFSSCTRFSSKLTIIFPVER*HCLMVS Trigger: TGATACCATCAAGCAGTGTCATCTTTCAACAGGAAA...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CCA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCGTTGTTATGCAGCCATaGAAGGAAAAAGCTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLPFSSCTRFSSKLTIIVVMQP*KEKAEH Trigger: ATGTTCAGCTTTTTCCTTCCATGGCTGCATAACAAC...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR TCA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCGAAAAGCTTAAATCCTaGCTTTGTATGGGTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLPFSSCTRFSSKLTIIEKLKS*LCMGVL Trigger: CAAAACACCCATACAAAGTCAGGATTTAAGCTTTTC...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR GCA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTGAGATTAAAAATACATaGCCTCCCTACTTCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLPFSSCTRFSSKLTIEIKNT*PPYFIR Trigger: CCTTATGAAGTAGGGAGGGCATGTATTTTTAATCTC...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 90 bp | GGCGCGGTCGACGCAGCGCTCTTGGTGCCCACTGCGCACGCGTGCTaGGGCCCTTGCGCCCCTGCGGGCGGTGACACCCGGACCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAVDAALLVPTAHAC*GPCAPAGGDTRTTG Trigger: CCCCGTGGTCCGGGTGTCACCGCCCGCAGGGGCGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTCGACCGCGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 90 bp | CGCGGCGCGGTCGACGCAGCGCTCTTGGTGCCCACTGCGCACGCGTaGTGCGGCCCTTGCGCCCCTGCGGGCGGTGACACCCGGACCACG | + |
|
Preference number: 5 (lower is better) Translates to: RGAVDAALLVPTAHA*CGPCAPAGGDTRTT Trigger: CGTGGTCCGGGTGTCACCGCCCGCAGGGGCGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTCGACCGCGCCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 90 bp | GACGCAGCGCTCTTGGTGCCCACTGCGCACGCGTGCTGCGGCCCTTaGGCCCCTGCGGGCGGTGACACCCGGACCACGGGGCGGAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DAALLVPTAHACCGP*APAGGDTRTTGRRG Trigger: TCCTCTCCGCCCCGTGGTCCGGGTGTCACCGCCCGCAGGGGCGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 90 bp | AGAAACTCCAGGACGAAGGCGTGGGCCACCGGCCTGTGCAGCTGCTaGCGGGCGACTACGCGGGCCAGCCCCATGAGCAGCACCACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: RNSRTKAWATGLCSC*RATTRASPMSSTTD Trigger: GTCGGTGGTGCTGCTCATGGGGCTGGCCCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGAGTTTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 90 bp | GCTAGAAACTCCAGGACGAAGGCGTGGGCCACCGGCCTGTGCAGCTaGTGCCGGGCGACTACGCGGGCCAGCCCCATGAGCAGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: ARNSRTKAWATGLCS*CRATTRASPMSSTT Trigger: GGTGGTGCTGCTCATGGGGCTGGCCCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGAGTTTCTAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 90 bp | AAGGTGGCTAGAAACTCCAGGACGAAGGCGTGGGCCACCGGCCTGTaGAGCTGCTGCCGGGCGACTACGCGGGCCAGCCCCATGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KVARNSRTKAWATGL*SCCRATTRASPMSS Trigger: GCTGCTCATGGGGCTGGCCCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGAGTTTCTAGCCACCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 90 bp | CAGCAGCAGAGCTGGAAGGTGGCTAGAAACTCCAGGACGAAGGCGTaGGCCACCGGCCTGTGCAGCTGCTGCCGGGCGACTACGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QQQSWKVARNSRTKA*ATGLCSCCRATTRA Trigger: GGCCCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGAGTTTCTAGCCACCTTCCAGCTCTGCTGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 90 bp | GTCAGCGTCCAGGTGGGGTGCGCGGGGTGCTGTTCGCTCAGCAGTTaGAGCTCGTGGGTGCAGCAGCAGAGCTGGAAGGTGGCTAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSVQVGCAGCCSLSS*SSWVQQQSWKVARN Trigger: GTTTCTAGCCACCTTCCAGCTCTGCTGCTGCACCCACGAGCTGCAACTGCTGAGCGAACAGCACCCCGCGCACCCCACCTGGACGCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 90 bp | CGCTCAGCAGTTGCAGCTCGTGGGTGCAGCAGCAGAGCTGGAAGGTaGCTAGAAACTCCAGGACGAAGGCGTGGGCCACCGGCCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSAVAARGCSSRAGR*LETPGRRRGPPACA Trigger: TGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGAGTTTCTAGCCACCTTCCAGCTCTGCTGCTGCACCCACGAGCTGCAACTGCTGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 90 bp | CAGGTGGGGTGCGCGGGGTGCTGTTCGCTCAGCAGTTGCAGCTCGTaGGTGCAGCAGCAGAGCTGGAAGGTGGCTAGAAACTCCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: QVGCAGCCSLSSCSS*VQQQSWKVARNSRT Trigger: CGTCCTGGAGTTTCTAGCCACCTTCCAGCTCTGCTGCTGCACCCACGAGCTGCAACTGCTGAGCGAACAGCACCCCGCGCACCCCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 90 bp | GGCCATGCACAAGCGAGAAGAAGTAGACGAGCGTCAGCGTCCAGGTaGGGTGCGCGGGGTGCTGTTCGCTCAGCAGTTGCAGCTCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GHAQARRSRRASASR*GARGAVRSAVAARG Trigger: CCCACGAGCTGCAACTGCTGAGCGAACAGCACCCCGCGCACCCCACCTGGACGCTGACGCTCGTCTACTTCTTCTCGCTTGTGCATGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 90 bp | TGGGGTGCGCGGGGTGCTGTTCGCTCAGCAGTTGCAGCTCGTGGGTaGAGCAGCAGAGCTGGAAGGTGGCTAGAAACTCCAGGACGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGARGAVRSAVAARG*SSRAGRWLETPGRR Trigger: CCTTCGTCCTGGAGTTTCTAGCCACCTTCCAGCTCTGCTGCTGCACCCACGAGCTGCAACTGCTGAGCGAACAGCACCCCGCGCACCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 90 bp | CCCCCAGCATCATCTGCATCATCACGCCGCACGGGTTGCTGGACGTaGCCACCAGAGTCAGGCCATGCACAAGCGAGAAGAAGTAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: PPASSASSRRTGCWT*PPESGHAQARRSRR Trigger: TCGTCTACTTCTTCTCGCTTGTGCATGGCCTGACTCTGGTGGGCACGTCCAGCAACCCGTGCGGCGTGATGATGCAGATGATGCTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 90 bp | GCAGCCAGCAGGTGGATACGAAGCTTGGTTCGGACTTCCTGGAAGTaGAGCAGAGCGCTGTGGAAGAGAAAGGAGCAGACGGCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AASRWIRSLVRTSWK*SRALWKRKEQTASV Trigger: CACAGAGGCCGTCTGCTCCTTTCTCTTCCACAGCGCTCTGCTGCACTTCCAGGAAGTCCGAACCAAGCTTCGTATCCACCTGCTGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS TCA 90 bp | GCAAGTCGACTCGGATGGGATTCTTGCAAGCGAAGCTCCTCTCGCTaGCGTGATACTGGGTCAGACCCAAGCTCCACAAGGCGCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASRLGWDSCKRSSSR*RDTGSDPSSTRRLC Trigger: GCACAAGCGCCTTGTGGAGCTTGGGTCTGACCCAGTATCACGTCAGCGAGAGGAGCTTCGCTTGCAAGAATCCCATCCGAGTCGACTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS TCA 90 bp | TCGACTCGGATGGGATTCTTGCAAGCGAAGCTCCTCTCGCTGACGTaGTACTGGGTCAGACCCAAGCTCCACAAGGCGCTTGTGCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: STRMGFLQAKLLSLT*YWVRPKLHKALVQY Trigger: GTACTGCACAAGCGCCTTGTGGAGCTTGGGTCTGACCCAGTATCACGTCAGCGAGAGGAGCTTCGCTTGCAAGAATCCCATCCGAGTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCACTCGGATGGGATTCTaGCAAGCGAAGCTCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSTRMGF*QAKLLS Trigger: CGAGAGGAGCTTCGCTTGCAAGAATCCCATCCGAGT...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCCTCAAAGGAAGTTAACACTGATGAATCCAGTGCAGCCGGTGTTTTCCTCTGTGATGACCGCTTaGAGCAAGTCGACTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QLPQRKLTLMNPVQPVFSSVMTA*SKSTRM Trigger: CATCCGAGTCGACTTGCTCAAAGCGGTCATCACAGA...GGAAAACACCGGCTGCACTGGATTCATCAGTGTTAACTTCCTTTGAGGAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CAA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGAAGCTCCACAAGGCGCTaGTGCAGTACCTGCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGSSTRR*CSTCCT Trigger: TGTGCAGCAGGTACTGCACAAGCGCCTTGTGGAGCT...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CAA 90 bp | TCACCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCACGCCGCACGGGTaGCTGGACGTGCCCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPLLPFSSCTRFSSKLTIITPHG*LDVPTR Trigger: TCTGGTGGGCACGTCCAGCAACCCGTGCGGCGTGAT...AATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CAA 90 bp | TGCAGCCGGTGTTTTCCATATGAGGTGATAAAATCTTTATCACATCCAGCTGGAAGGTGGATACGAAGCTaGGTTCGGACTTCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSRCFPYEVIKSLSHPAGRWIRS*VRTSWK Trigger: CTTCCAGGAAGTCCGAACCAAGCTTCGTATCCACCT...TCCAGCTGGATGTGATAAAGATTTTATCACCTCATATGGAAAACACCGGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CAA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCCTGTTCGCTCAGCAGTaGCAGCTCGTGGGTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLPFSSCTRFSSKLTIILFAQQ*QLVGAA Trigger: TGCTGCACCCACGAGCTGCAACTGCTGAGCGAACAG...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CAA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCCCCCAGTTCTGTAAGTaGACGCCTTGTACTTTTATA | + |
|
Preference number: 5 (lower is better) Translates to: PLLPFSSCTRFSSKLTIIPQFCK*TPCTFI Trigger: TATAAAAGTACAAGGCGTCAACTTACAGAACTGGGG...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS-3UTR CAA 90 bp | CCTTTACTTCCCTTCTCATCCTGTACTCGTTTTTCATCAAAGTTAACAATTATCTTAAAGAATAACCACTaGGCTGGAGCTAGTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: PLLPFSSCTRFSSKLTIILKNNH*AGASEI Trigger: AATCTCACTAGCTCCAGCCAAGTGGTTATTCTTTAA...GATAATTGTTAACTTTGATGAAAAACGAGTACAGGATGAGAAGGGAAGTAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS TCA 72 bp | GCACGCGTGCTGCGGCCCTTGCGCCCCTGCGGGCGGTaGCACCCGGACCACGGGGCGGAGAGGAGCGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: ARVLRPLRPCGR*HPDHGAERSGT Trigger: CGTGCCGCTCCTCTCCGCCCCGTGGTCCGGGTGTCACCGCCCGCAGGGGCGCAAGGGCCGCAGCACGCGTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 72 bp | GCGCGGCGCGGTCGACGCAGCGCTCTTGGTGCCCACTaGGCACGCGTGCTGCGGCCCTTGCGCCCCTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARRGRRSALGAH*ARVLRPLRPCG Trigger: CCCGCAGGGGCGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTCGACCGCGCCGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 72 bp | AGGGCCGGCGCGGCGCGGTCGACGCAGCGCTCTTGGTaGCCACTGCGCACGCGTGCTGCGGCCCTTGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RAGAARSTQRSW*PLRTRAAALAP Trigger: GGGCGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTCGACCGCGCCGCGCCGGCCCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS CCA 72 bp | CGGAGGGCCGGCGCGGCGCGGTCGACGCAGCGCTCTTaGTGCCCACTGCGCACGCGTGCTGCGGCCCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRAGAARSTQRS*CPLRTRAAALA Trigger: CGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTCGACCGCGCCGCGCCGGCCCTCCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS CAA 72 bp | GCGGAGGGCCGGCGCGGCGCGGTCGACGCAGCGCTCTaGGTGCCCACTGCGCACGCGTGCTGCGGCCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AEGRRGAVDAAL*VPTAHACCGPC Trigger: GCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTCGACCGCGCCGCGCCGGCCCTCCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 72 bp | CTCTTGGTGCCCACTGCGCACGCGTGCTGCGGCCCTTaGGCCCCTGCGGGCGGTGACACCCGGACCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLVPTAHACCGP*APAGGDTRTTG Trigger: CCCCGTGGTCCGGGTGTCACCGCCCGCAGGGGCGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 72 bp | GACGCAGCGCTCTTGGTGCCCACTGCGCACGCGTGCTaGGGCCCTTGCGCCCCTGCGGGCGGTGACACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: DAALLVPTAHAC*GPCAPAGGDTR Trigger: CCGGGTGTCACCGCCCGCAGGGGCGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS CCA 72 bp | CCTGCAGCTCGGACCGGAGCCCCAGCAGCGGCGACATaGCTCCGTCGCCGCCTGAGCGGGTTGCGGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PAARTGAPAAAT*LRRRLSGLRAP Trigger: CGGAGCCCGCAACCCGCTCAGGCGGCGACGGAGCCATGTCGCCGCTGCTGGGGCTCCGGTCCGAGCTGCAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 72 bp | GTCGACGCAGCGCTCTTGGTGCCCACTGCGCACGCGTaGTGCGGCCCTTGCGCCCCTGCGGGCGGTGACACC | + |
|
Preference number: 6 (lower is better) Translates to: VDAALLVPTAHA*CGPCAPAGGDT Trigger: GGTGTCACCGCCCGCAGGGGCGCAAGGGCCGCAGCACGCGTGCGCAGTGGGCACCAAGAGCGCTGCGTCGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 72 bp | AGGACGAAGGCGTGGGCCACCGGCCTGTGCAGCTGCTaGCGGGCGACTACGCGGGCCAGCCCCATGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RTKAWATGLCSC*RATTRASPMSS Trigger: GCTGCTCATGGGGCTGGCCCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 72 bp | TCCAGGACGAAGGCGTGGGCCACCGGCCTGTGCAGCTaGTGCCGGGCGACTACGCGGGCCAGCCCCATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRTKAWATGLCS*CRATTRASPMS Trigger: GCTCATGGGGCTGGCCCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 72 bp | AGAAACTCCAGGACGAAGGCGTGGGCCACCGGCCTGTaGAGCTGCTGCCGGGCGACTACGCGGGCCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RNSRTKAWATGL*SCCRATTRASP Trigger: GGGGCTGGCCCGCGTAGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGAGTTTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS TCA 72 bp | GCAGCTGCTGCCGGGCGACTACGCGGGCCAGCCCCATaGGCAGCACCACCGACAGCATCAGTCCCAGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAGRLRGPAP*AAPPTASVPAR Trigger: CCTCGCTGGGACTGATGCTGTCGGTGGTGCTGCTCATGGGGCTGGCCCGCGTAGTCGCCCGGCAGCAGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 72 bp | CAGGTGGGGTGCGCGGGGTGCTGTTCGCTCAGCAGTTaGAGCTCGTGGGTGCAGCAGCAGAGCTGGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVGCAGCCSLSS*SSWVQQQSWKV Trigger: CACCTTCCAGCTCTGCTGCTGCACCCACGAGCTGCAACTGCTGAGCGAACAGCACCCCGCGCACCCCACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 72 bp | AGCTGGAAGGTGGCTAGAAACTCCAGGACGAAGGCGTaGGCCACCGGCCTGTGCAGCTGCTGCCGGGCGACT | + |
|
Preference number: 6 (lower is better) Translates to: SWKVARNSRTKA*ATGLCSCCRAT Trigger: AGTCGCCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTCCTGGAGTTTCTAGCCACCTTCCAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CAA 72 bp | CCAGGTGGGGTGCGCGGGGTGCTGTTCGCTCAGCAGTaGCAGCTCGTGGGTGCAGCAGCAGAGCTGGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGGVRGVLFAQQ*QLVGAAAELEG Trigger: ACCTTCCAGCTCTGCTGCTGCACCCACGAGCTGCAACTGCTGAGCGAACAGCACCCCGCGCACCCCACCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS TCA 72 bp | CTTGTGCAGTACCTGCTGCACAGGGCACTAACCAGCTaGGCCAATAGCCTCACCGCACCCGTCTCGGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVQYLLHRALTS*ANSLTAPVSGD Trigger: GTCCCCCGAGACGGGTGCGGTGAGGCTATTGGCTCAGCTGGTTAGTGCCCTGTGCAGCAGGTACTGCACAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 72 bp | CCCCCAGCATCATCTGCATCATCACGCCGCACGGGTTaGTGGACGTGCCCACCAGAGTCAGGCCATGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: PPASSASSRRTG*WTCPPESGHAQ Trigger: TTGTGCATGGCCTGACTCTGGTGGGCACGTCCAGCAACCCGTGCGGCGTGATGATGCAGATGATGCTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 72 bp | CAAGCGAGAAGAAGTAGACGAGCGTCAGCGTCCAGGTaGGGTGCGCGGGGTGCTGTTCGCTCAGCAGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QARRSRRASASR*GARGAVRSAVA Trigger: TGCAACTGCTGAGCGAACAGCACCCCGCGCACCCCACCTGGACGCTGACGCTCGTCTACTTCTTCTCGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 72 bp | CCAGCATCATCTGCATCATCACGCCGCACGGGTTGCTaGACGTGCCCACCAGAGTCAGGCCATGCACAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PASSASSRRTGC*TCPPESGHAQA Trigger: CGCTTGTGCATGGCCTGACTCTGGTGGGCACGTCCAGCAACCCGTGCGGCGTGATGATGCAGATGATGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS GCA 72 bp | CGGGGTGCTGTTCGCTCAGCAGTTGCAGCTCGTGGGTaGAGCAGCAGAGCTGGAAGGTGGCTAGAAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RGAVRSAVAARG*SSRAGRWLETP Trigger: TGGAGTTTCTAGCCACCTTCCAGCTCTGCTGCTGCACCCACGAGCTGCAACTGCTGAGCGAACAGCACCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 72 bp | GCCAGCAGGTGGATACGAAGCTTGGTTCGGACTTCCTaGAAGTGCAGCAGAGCGCCTCCGCAGTCTCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASRWIRSLVRTS*KCSRAPPQSPS Trigger: TGAGGGAGACTGCGGAGGCGCTCTGCTGCACTTCCAGGAAGTCCGAACCAAGCTTCGTATCCACCTGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528638.1 |
||
| CDS GCA 72 bp | TCATCTGCATCATCACGCCGCACGGGTTGCTGGACGTaGCCACCAGAGTCAGGCCATGCACAAGCGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSASSRRTGCWT*PPESGHAQARR Trigger: TCTTCTCGCTTGTGCATGGCCTGACTCTGGTGGGCACGTCCAGCAACCCGTGCGGCGTGATGATGCAGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CAA 90 bp | GCGCTGTGGAAGAGAAAGGAGCAGACGGCCTCTGTGATGACCGCTTaGAGCAAGTCGACTCGGATGGGATTCTTGCAAGCGAAGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALWKRKEQTASVMTA*SKSTRMGFLQAKLL Trigger: GAGGAGCTTCGCTTGCAAGAATCCCATCCGAGTCGACTTGCTCAAAGCGGTCATCACAGAGGCCGTCTGCTCCTTTCTCTTCCACAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS TCA 72 bp | CTCGGATGGGATTCTTGCAAGCGAAGCTCCTCTCGCTaGCGTGATACTGGGTCAGACCCAAGCTCCACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGWDSCKRSSSR*RDTGSDPSSTR Trigger: CCTTGTGGAGCTTGGGTCTGACCCAGTATCACGTCAGCGAGAGGAGCTTCGCTTGCAAGAATCCCATCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CCA 72 bp | TTGGTTCGGACTTCCTGGAAGTGCAGCAGAGCGCTGTaGAAGAGAAAGGAGCAGACGGCCTCTGTGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: LVRTSWKCSRAL*KRKEQTASVMT Trigger: GGTCATCACAGAGGCCGTCTGCTCCTTTCTCTTCCACAGCGCTCTGCTGCACTTCCAGGAAGTCCGAACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS TCA 72 bp | ATGGGATTCTTGCAAGCGAAGCTCCTCTCGCTGACGTaGTACTGGGTCAGACCCAAGCTCCACAAGGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: MGFLQAKLLSLT*YWVRPKLHKAL Trigger: AAGCGCCTTGTGGAGCTTGGGTCTGACCCAGTATCACGTCAGCGAGAGGAGCTTCGCTTGCAAGAATCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CAA 72 bp | AAGAGAAAGGAGCAGACGGCCTCTGTGATGACCGCTTaGAGCAAGTCGACTCGGATGGGATTCTTGCAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: KRKEQTASVMTA*SKSTRMGFLQA Trigger: CGCTTGCAAGAATCCCATCCGAGTCGACTTGCTCAAAGCGGTCATCACAGAGGCCGTCTGCTCCTTTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313578.4 |
||
| CDS CAA 72 bp | CTTTGGAACAGTTATTCCTTTTTATTAATTGTATGGTaGTTATGCAGCCATGGAAGGAAAAAGCTGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: LWNSYSFLLIVW*LCSHGRKKLNI Trigger: GATGTTCAGCTTTTTCCTTCCATGGCTGCATAACAACCATACAATTAATAAAAAGGAATAACTGTTCCAAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000313578.4 ENST00000528638.1 |
||