RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AQP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000240583

Ensembl transcript IDs: ENST00000311813.11, ENST00000409611.1, ENST00000409899.5, ENST00000441328.7, ENST00000482461.1, ENST00000651610.1, ENST00000652692.1, ENST00000652696.1

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCAGCTGAGGGCTTGGAAAACCCCCAGGCCCAGCAAGGGCATCTaGCTCCATGGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGC +
Preference number: 1 (lower is better)
Translates to: DQLRAWKTPRPSKGI*LHGLTCIRVFLSSG
Trigger: GCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCATGGAGGCAGATGCCCTTGCTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 90 bp GAGGGCTTGGAAAACCCCCAGGCCCAGCAAGGGCATCTGCCTCCATaGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCT +
Preference number: 1 (lower is better)
Translates to: EGLENPQAQQGHLPP*ADLHQGLSVLRLWA
Trigger: AGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCATGGAGGCAGATGCCCTTGCTGGGCCTGGGGGTTTTCCAAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 90 bp GGACGATTCCAAGGTCAGGCAGTAAGTCCGAGCGGGTCAGGGGCTTaGGAGCAAGCAGAACTGAAGGAGCAAAGCTTGCCCCCTCCACTG +
Preference number: 1 (lower is better)
Translates to: GRFQGQAVSPSGSGA*EQAELKEQSLPPPL
Trigger: CAGTGGAGGGGGCAAGCTTTGCTCCTTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCTCGGACTTACTGCCTGACCTTGGAATCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 90 bp GCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTaGAAAGAGCAGCCCTGGTCTAGACCACGTCTTCTGGACCCATGC +
Preference number: 1 (lower is better)
Translates to: ACGDSHAPGERTQGK*KEQPWSRPRLLDPC
Trigger: GCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR TCA 90 bp CAACTCTCCCCACTCCTGGCCCCTGGCCATTGCCCAGGCAGAAACTaGGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGT +
Preference number: 1 (lower is better)
Translates to: QLSPLLAPGHCPGRN*EAGNERNQPRGPGS
Trigger: ACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTCTGCCTGGGCAATGGCCAGGGGCCAGGAGTGGGGAGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
3UTR GCA 90 bp CTAGACCACGTCTTCTGGACCCATGCTGTGTTTGCACTTAGGGGCTaGAGGCCTGTAGAGCTCTGCCGGTCCCTGCCACTTTGCAGAAGG +
Preference number: 1 (lower is better)
Translates to: LDHVFWTHAVFALRG*RPVELCRSLPLCRR
Trigger: CCTTCTGCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCTGCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 90 bp AAAACCCCCAGGCCCAGCAAGGGCATCTGCCTCCATGGGCTGACCTaGATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCT +
Preference number: 1 (lower is better)
Translates to: KTPRPSKGICLHGLT*IRVFLSSGFGLQTA
Trigger: AGCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCATGGAGGCAGATGCCCTTGCTGGGCCTGGGGGTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 90 bp TGTCTGCTCTGCACACATGTACACAGAGGCGTGTGGCGACAGTCATaGCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: CLLCTHVHRGVWRQS*PWGKNTGQVERAAL
Trigger: CAGGGCTGCTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATGTGTGCAGAGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 90 bp CACAGGGCAAGTGGAAAGAGCAGCCCTGGTCTAGACCACGTCTTCTaGACCCATGCTGTGTTTGCACTTAGGGGCTGCAGGCCTGTAGAG +
Preference number: 1 (lower is better)
Translates to: HRASGKSSPGLDHVF*THAVFALRGCRPVE
Trigger: CTCTACAGGCCTGCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACTTGCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 90 bp TCAAGGCTGACCTCTCCCCTCCAGGTCAATGCAGAGGGAAGGCTGTaGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCT +
Preference number: 1 (lower is better)
Translates to: SRLTSPLQVNAEGRL*PGVIQQACAGYSAA
Trigger: AGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCCTTCCCTCTGCATTGACCTGGAGGGGAGAGGTCAGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 90 bp ACTACCTGGCTGTCTGTCGATCTCTGCTTTGTAGCCTGTCTGCTCTaGACACATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTGG +
Preference number: 1 (lower is better)
Translates to: TTWLSVDLCFVACLL*THVHRGVWRQSCPW
Trigger: CCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATGTGTGCAGAGCAGACAGGCTACAAAGCAGAGATCGACAGACAGCCAGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 90 bp TGCTTTGTAGCCTGTCTGCTCTGCACACATGTACACAGAGGCGTGTaGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAA +
Preference number: 1 (lower is better)
Translates to: CFVACLLCTHVHRGV*RQSCPWGKNTGQVE
Trigger: TTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATGTGTGCAGAGCAGACAGGCTACAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR TCA 90 bp TGTGCAGGTTATTCAGCTGCTCAAATGCCTCTGATCAGGAGCTCATaGGCAAGGGAAGAGCTTGCTCCATCCTGGTCAGGACCAGCTGAG +
Preference number: 1 (lower is better)
Translates to: CAGYSAAQMPLIRSS*AREELAPSWSGPAE
Trigger: CTCAGCTGGTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCTCATGAGCTCCTGATCAGAGGCATTTGAGCAGCTGAATAACCTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 90 bp GCACCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTaGCCAAAGGCACAAAGCAATTACGGTAGAATCCCAGGCACTTGC +
Preference number: 1 (lower is better)
Translates to: APLGARCMLGKEGGP*PKAQSNYGRIPGTC
Trigger: GCAAGTGCCTGGGATTCTACCGTAATTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 90 bp AATGAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATaGAGGGCCTTGGTGTGCAGCAGCCTAGAACCAGGCAGGGGGTGG +
Preference number: 1 (lower is better)
Translates to: NEIPTPKRHICRADR*RALVCSSLEPGRGW
Trigger: CCACCCCCTGCCTGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
3UTR TCA 90 bp CCCATAAGAGGCTTGACCATGCAGGTCTGGCAGATCTTGGGGAAGTaGCTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACC +
Preference number: 1 (lower is better)
Translates to: PIRGLTMQVWQILGK*LWPACQSVYSMDFT
Trigger: GGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACCTGCATGGTCAAGCCTCTTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
3UTR TCA 90 bp TCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAATGCCTCTaGTCAGGAGCTCATGAGCAAGGGAAGAGCTTGCTCCATCCTGGT +
Preference number: 1 (lower is better)
Translates to: SYSKPVQVIQLLKCL*SGAHEQGKSLLHPG
Trigger: ACCAGGATGGAGCAAGCTCTTCCCTTGCTCATGAGCTCCTGATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 90 bp CATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTaGTTTGTAGCCTGTCTGCTCTGCACACATGTACACAGAGGCGTG +
Preference number: 1 (lower is better)
Translates to: HREQKVPTTWLSVDL*FVACLLCTHVHRGV
Trigger: CACGCCTCTGTGTACATGTGTGCAGAGCAGACAGGCTACAAAGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 90 bp ATCCAGCCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTaGAACTATAGCTACCTCATTAGGTCAAGGCTGACCTCTCCCCTC +
Preference number: 1 (lower is better)
Translates to: IQPSKLILISELSLG*NYSYLIRSRLTSPL
Trigger: GAGGGGAGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 90 bp TCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTaGTTTCTGTTGCCATCATGGCTAAGTGCACAGTGGTGGAGCTGC +
Preference number: 1 (lower is better)
Translates to: SGCPSASKYLRNCVS*FLLPSWLSAQWWSC
Trigger: GCAGCTCCACCACTGTGCACTTAGCCATGATGGCAACAGAAACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
3UTR GCA 90 bp TCTTGGTTTCTGTTGCCATCATGGCTAAGTGCACAGTGGTGGAGCTaGTCTGGCCCTGGTGGAATTGAAAGGACTTATGTAGATAGAATC +
Preference number: 1 (lower is better)
Translates to: SWFLLPSWLSAQWWS*SGPGGIERTYVDRI
Trigger: GATTCTATCTACATAAGTCCTTTCAATTCCACCAGGGCCAGAGCAGCTCCACCACTGTGCACTTAGCCATGATGGCAACAGAAACCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp ACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCCCCCTGCCCCCTACGTaGATGCCCGGGCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: TLASLSECLQYGFHPSPPPLPPT*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACGTAGGGGGCAGGGG...GGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
3UTR-3UTR CCA 90 bp TGCAGGTCTGGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTCCCCTGCCCCCTACGTaGATGCCCGGGCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: CRSGRSWGSDFGQLVRVSPLPPT*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACGTAGGGGGCAGGGG...AGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
3UTR-3UTR CCA 90 bp ACACATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGTCCCCAGGAAGCTGTaGATGCCCGGGCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: THVHRGVWRQSCPWGKNTVPRKL*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACAGCTTCCTGGGGAC...TGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652696.1
3UTR CAA 90 bp GGGACGATTCCAAGGTCAGGCAGTAAGTCCGAGCGGGTCAGGGGCTaGGGAGCAAGCAGAACTGAAGGAGCAAAGCTTGCCCCCTCCACT +
Preference number: 2 (lower is better)
Translates to: GTIPRSGSKSERVRG*GASRTEGAKLAPST
Trigger: AGTGGAGGGGGCAAGCTTTGCTCCTTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCTCGGACTTACTGCCTGACCTTGGAATCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp GGAGCTCATGAGCAAGGGAAGAGCTTGCTCCATCCTGGTCAGGACCAGCTGAGGGTGTGGCGACAGTCATaGCCCTGGGGAAAGAACACA +
Preference number: 2 (lower is better)
Translates to: GAHEQGKSLLHPGQDQLRVWRQS*PWGKNT
Trigger: TGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACAC...CCTCAGCTGGTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCTCATGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp TCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCTCAAGTGCTCTTTGATAAACCCCCTGCCCCCTACGTaGATGCCCGGGCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: SFCPQALGFRQLKCSLINPLPPT*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACGTAGGGGGCAGGGG...GTTTATCAAAGAGCACTTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311813.11
3UTR-3UTR CCA 90 bp AGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGCTTCTAGAGCTGCTCTGGCCGTaGATGCCCGGGCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: RCDALVIVKGLLVVPLLLELLWP*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACGGCCAGAGCAGCTC...TAGAAGCAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652692.1
3UTR-3UTR GCA 90 bp GGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAAAGCTCTGCCGGTCCCTaGCACTTTGCAGAAGGAGGT +
Preference number: 2 (lower is better)
Translates to: GCGQGSYSKPVQVIQLLKSSAGP*HFAEGG
Trigger: ACCTCCTTCTGCAAAGTGGCAGGGACCGGCAGAGCT...TTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp TCCTTGGGCTGCAACTATAGCTACCTCATTAGGTCAAGGCTGACCTCTCCCCTCAGGCCTGTAGAGCTCTaGCGGTCCCTGCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: SLGCNYSYLIRSRLTSPLRPVEL*RSLPLC
Trigger: GCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCT...GAGGGGAGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp GGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAAAGCGGGTCAGGGGCTTaGGAGCAAGCAGAACTGAAG +
Preference number: 2 (lower is better)
Translates to: GCGQGSYSKPVQVIQLLKSGSGA*EQAELK
Trigger: CTTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCT...TTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp ACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGCACAGTGGTGGAGCTaGTCTGGCCCTGGTGGAATT +
Preference number: 2 (lower is better)
Translates to: TEKLEMRGISLVVQGVARAQWWS*SGPGGI
Trigger: AATTCCACCAGGGCCAGAGCAGCTCCACCACTGTGC...TCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp CTCTCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTAGGCCTGTAGAGCTCTaGCGGTCCCTGCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: LSIGNRKFQLPGCLSISARPVEL*RSLPLC
Trigger: GCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCT...AGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTCCCAGCAAGGGCATCTaGCTCCATGGGCTGACCTGC +
Preference number: 2 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGPSKGI*LHGLTC
Trigger: GCAGGTCAGCCCATGGAGGCAGATGCCCTTGCTGGG...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCCTAAGTGCACAGTGGTaGAGCTGCTCTGGCCGTGGA +
Preference number: 2 (lower is better)
Translates to: TPKRHICRADRCRALVCSLSAQW*SCSGRG
Trigger: TCCACGGCCAGAGCAGCTCCACCACTGTGCACTTAG...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652692.1
3UTR-3UTR GCA 90 bp TGGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCCCATTGGGAGCAAGGTaGATGTTAGGAAAAGAAGGA +
Preference number: 2 (lower is better)
Translates to: WADLHQGLSVLRLWASDSPLGAR*MLGKEG
Trigger: TCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGG...GCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp AACTATAGCTACCTCATTAGGTCAAGGCTGACCTCTCCCCTCCAGGTCAATGCATTTGCACTTAGGGGCTaGAGGCCTGTAGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: NYSYLIRSRLTSPLQVNAFALRG*RPVELC
Trigger: GCAGAGCTCTACAGGCCTGCAGCCCCTAAGTGCAAA...TGCATTGACCTGGAGGGGAGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTGCACAGTGGTGGAGCTaGTCTGGCCCTGGTGGAATT +
Preference number: 2 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGAQWWS*SGPGGI
Trigger: AATTCCACCAGGGCCAGAGCAGCTCCACCACTGTGC...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp TCCTTGGGCTGCAACTATAGCTACCTCATTAGGTCAAGGCTGACCTCTCCCCTCCTAGACCACGTCTTCTaGACCCATGCTGTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: SLGCNYSYLIRSRLTSPLLDHVF*THAVFA
Trigger: TGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAG...GAGGGGAGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp AAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGAAAGTTCCAACTACCTaGCTGTCTGTCGATCTCTGC +
Preference number: 2 (lower is better)
Translates to: KLEMRGISLVVQGVARDRKVPTT*LSVDLC
Trigger: GCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTT...CCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CAA 90 bp CCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTTTCTGTaGCCATCATGGCTAAGTGCACAGTGGTGGAGCTGCTCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: PSASKYLRNCVSWFL*PSWLSAQWWSCSGP
Trigger: AGGGCCAGAGCAGCTCCACCACTGTGCACTTAGCCATGATGGCAACAGAAACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CAA 90 bp CCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTTTCTGTaGCCATCATGGCTAAGTGCACAGTGGTGGAGCTGCTCTGGCCGT +
Preference number: 2 (lower is better)
Translates to: PSASKYLRNCVSWFL*PSWLSAQWWSCSGR
Trigger: ACGGCCAGAGCAGCTCCACCACTGTGCACTTAGCCATGATGGCAACAGAAACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652692.1
3UTR-3UTR TCA 90 bp AATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTGAGGGAGTAGAGAACTaGAGAATGAGCAAGATAATG +
Preference number: 2 (lower is better)
Translates to: NERNQPRGPGSSQRQGLGEGVEN*RMSKIM
Trigger: CATTATCTTGCTCATTCTTCAGTTCTCTACTCCCTC...ACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp CTCTCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTGTAGCCTGTCTGCTCTaGACACATGTACACAGAGGC +
Preference number: 2 (lower is better)
Translates to: LSIGNRKFQLPGCLSISAVACLL*THVHRG
Trigger: GCCTCTGTGTACATGTGTGCAGAGCAGACAGGCTAC...AGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp ATCCAGCCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATCGACAGTCATGCCCCTaGGGAAAGAACACAGGGCAA +
Preference number: 2 (lower is better)
Translates to: IQPSKLILISELSLGCNYRQSCP*GKNTGQ
Trigger: TTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCG...ATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR TCA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCCTTCAAGGGAGTGGGTaGATTGGTAAATCTTGGTCC +
Preference number: 2 (lower is better)
Translates to: TPKRHICRADRCRALVCSLQGSG*IGKSWS
Trigger: GGACCAAGATTTACCAATTCACCCACTCCCTTGAAG...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR TCA 90 bp CCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATAGCTACAGGTCACTCAGGCCCTaGTATAGGGACGATTCCAAG +
Preference number: 2 (lower is better)
Translates to: PSKLILISELSLGCNYSYRSLRP*YRDDSK
Trigger: CTTGGAATCGTCCCTATATCAGGGCCTGAGTGACCT...GTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp CTCTCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTAGAGTGTCTACAGTATaGATTTCACCCCTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LSIGNRKFQLPGCLSISARVSTV*ISPLPS
Trigger: GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCT...AGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311813.11
3UTR CAA 90 bp GATAGAATCCAGCCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTaGGGCTGCAACTATAGCTACCTCATTAGGTCAAGGCTGACCTCT +
Preference number: 2 (lower is better)
Translates to: DRIQPSKLILISELS*GCNYSYLIRSRLTS
Trigger: AGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGGCTGGATTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CCA 90 bp AATGAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTGGAAAGAGCAGCCCTaGTCTAGACCACGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: NEIPTPKRHICRADRCRAWKEQP*SRPRLL
Trigger: CAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCA...GGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp CCTCAGGCTTTGGGCTTCAGACAGCTCAAGTGCTCTTTGATAAACATACACCAGCCATTGGGAGCAAGGTaGATGTTAGGAAAAGAAGGA +
Preference number: 2 (lower is better)
Translates to: PQALGFRQLKCSLINIHQPLGAR*MLGKEG
Trigger: TCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGG...CTGGTGTATGTTTATCAAAGAGCACTTGAGCTGTCTGAAGCCCAAAGCCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR GCA 90 bp ATTGAAAGGACTTATGTAGATAGAATCCAGCCTTCAAAGCTGATCCTGATCTCTCTGTCTGTCGATCTCTaGTTTGTAGCCTGTCTGCTC +
Preference number: 2 (lower is better)
Translates to: IERTYVDRIQPSKLILISLSVDL*FVACLL
Trigger: GAGCAGACAGGCTACAAAGCAGAGATCGACAGACAG...AGAGATCAGGATCAGCTTTGAAGGCTGGATTCTATCTACATAAGTCCTTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR TCA 72 bp GTCCGAGCGGGTCAGGGGCTTGGGAGCAAGCAGAACTaGAGGAGCAAAGCTTGCCCCCTCCACTGCACCTCC +
Preference number: 3 (lower is better)
Translates to: VRAGQGLGSKQN*RSKACPLHCTS
Trigger: GGAGGTGCAGTGGAGGGGGCAAGCTTTGCTCCTTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCTCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp GTGTTTGCACTTAGGGGCTGCAGGCCTGTAGAGCTCTaGCGGTCCCTGCCACTTTGCAGAAGGAGGTCACTC +
Preference number: 3 (lower is better)
Translates to: VFALRGCRPVEL*RSLPLCRRRSL
Trigger: GAGTGACCTCCTTCTGCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCTGCAGCCCCTAAGTGCAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp GTCTTCTGGACCCATGCTGTGTTTGCACTTAGGGGCTaGAGGCCTGTAGAGCTCTGCCGGTCCCTGCCACTT +
Preference number: 3 (lower is better)
Translates to: VFWTHAVFALRG*RPVELCRSLPL
Trigger: AAGTGGCAGGGACCGGCAGAGCTCTACAGGCCTGCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp AGGCCCAGCAAGGGCATCTGCCTCCATGGGCTGACCTaGATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: RPSKGICLHGLT*IRVFLSSGFGL
Trigger: AAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCATGGAGGCAGATGCCCTTGCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 72 bp CAAGGTCAGGCAGTAAGTCCGAGCGGGTCAGGGGCTTaGGAGCAAGCAGAACTGAAGGAGCAAAGCTTGCCC +
Preference number: 3 (lower is better)
Translates to: QGQAVSPSGSGA*EQAELKEQSLP
Trigger: GGGCAAGCTTTGCTCCTTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCTCGGACTTACTGCCTGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CAA 90 bp TGGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCGAGCGGGTCAGGGGCTaGGGAGCAAGCAGAACTGAA +
Preference number: 3 (lower is better)
Translates to: WADLHQGLSVLRLWASDSERVRG*GASRTE
Trigger: TTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCTC...GCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CAA 90 bp AAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGGACCCATGCTGTGTTaGCACTTAGGGGCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: KLEMRGISLVVQGVARDRGPMLC*HLGAAG
Trigger: GCCTGCAGCCCCTAAGTGCAAACACAGCATGGGTCC...CCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 72 bp CATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTaGGGAAAGAACACAGGGCAAGTGGAAAGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: HVHRGVWRQSCP*GKNTGQVERAA
Trigger: GGCTGCTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CAA 90 bp CTGGCACACCTCCCATCATGCTCTGAGGGGCGACTAGCAGGTGGGTCCCTTTCTAAGGGAGTGGGTGAATaGGTAAATCTTGGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: LAHLPSCSEGRLAGGSLSKGVGE*VNLGPQ
Trigger: CTGGGGACCAAGATTTACCAATTCACCCACTCCCTT...AGAAAGGGACCCACCTGCTAGTCGCCCCTCAGAGCATGATGGGAGGTGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000652696.1
3UTR CCA 72 bp AGTGGAAAGAGCAGCCCTGGTCTAGACCACGTCTTCTaGACCCATGCTGTGTTTGCACTTAGGGGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: SGKSSPGLDHVF*THAVFALRGCR
Trigger: CCTGCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CAA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTGGACCAGCTGAGGGCTaGGAAAACCCCCAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGGPAEG*ENPQAQ
Trigger: CTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTCC...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR TCA 72 bp TGGGCTGCAACTATAGCTACCTCATTAGGTCAAGGCTaGCCTCTCCCCTCCAGGTCAATGCAGAGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: WAATIATSLGQG*PLPSRSMQREG
Trigger: GCCTTCCCTCTGCATTGACCTGGAGGGGAGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp GATCTCTTCCCCCTCCAAGCACCATTGGGAGCAAGGTaGATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAG +
Preference number: 3 (lower is better)
Translates to: DLFPLQAPLGAR*MLGKEGGPCPK
Trigger: CTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGTGCTTGGAGGGGGAAGAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp GGGAAGGCTGTGGCCAGGGGTCATACAGCAAGCCTGTaGAGGTTATTCAGCTGCTCAAATGCCTCTGATCAG +
Preference number: 3 (lower is better)
Translates to: GKAVARGHTASL*RLFSCSNASDQ
Trigger: CTGATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 72 bp GGGGAAAGAACACAGGGCAAGTGGAAAGAGCAGCCCTaGTCTAGACCACGTCTTCTGGACCCATGCTGTGTT +
Preference number: 3 (lower is better)
Translates to: GERTQGKWKEQP*SRPRLLDPCCV
Trigger: AACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACTTGCCCTGTGTTCTTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp CTGTCTGTCGATCTCTGCTTTGTAGCCTGTCTGCTCTaGACACATGTACACAGAGGCGTGTGGCGACAGTCA +
Preference number: 3 (lower is better)
Translates to: LSVDLCFVACLL*THVHRGVWRQS
Trigger: TGACTGTCGCCACACGCCTCTGTGTACATGTGTGCAGAGCAGACAGGCTACAAAGCAGAGATCGACAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp CCAACTCCAAAGAGACATATATGCAGAGCAGACAGATaGAGGGCCTTGGTGTGCAGCAGCCTAGAACCAGGC +
Preference number: 3 (lower is better)
Translates to: PTPKRHICRADR*RALVCSSLEPG
Trigger: GCCTGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
3UTR-3UTR CAA 90 bp CCTCAGGCTTTGGGCTTCAGACAGCTCAAGTGCTCTTTGATAAACATACACCAGACCCCCATAAGAGGCTaGACCATGCAGGTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: PQALGFRQLKCSLINIHQTPIRG*TMQVWQ
Trigger: CTGCCAGACCTGCATGGTCAAGCCTCTTATGGGGGT...CTGGTGTATGTTTATCAAAGAGCACTTGAGCTGTCTGAAGCCCAAAGCCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311813.11
3UTR-3UTR CAA 90 bp ACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGTGACTTTGGCCAGCTaGTCAGAGTGTCTACAGTAT +
Preference number: 3 (lower is better)
Translates to: TEKLEMRGISLVVQGVARVTLAS*SECLQY
Trigger: ATACTGTAGACACTCTGACAAGCTGGCCAAAGTCAC...TCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311813.11
3UTR-3UTR CAA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTCCCCTCCAAGCACCATaGGGAGCAAGGTGCATGTTA +
Preference number: 3 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGPLQAP*GARCML
Trigger: TAACATGCACCTTGCTCCCAATGGTGCTTGGAGGGG...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR TCA 72 bp AAGCCTGTGCAGGTTATTCAGCTGCTCAAATGCCTCTaGTCAGGAGCTCATGAGCAAGGGAAGAGCTTGCTC +
Preference number: 3 (lower is better)
Translates to: KPVQVIQLLKCL*SGAHEQGKSLL
Trigger: GAGCAAGCTCTTCCCTTGCTCATGAGCTCCTGATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp GGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTaGCCAAAGGCACAAAGCAATTACGGTAGAATCCCA +
Preference number: 3 (lower is better)
Translates to: GARCMLGKEGGP*PKAQSNYGRIP
Trigger: TGGGATTCTACCGTAATTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp AGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTaGTCAAATGCCTCTGATCAGGAGCTCATGAGCAAG +
Preference number: 3 (lower is better)
Translates to: RGHTASLCRLFS*SNASDQELMSK
Trigger: CTTGCTCATGAGCTCCTGATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp CTGTTGCCATCATGGCTAAGTGCACAGTGGTGGAGCTaGTCTGGCCCTGGTGGAATTGAAAGGACTTATGTA +
Preference number: 3 (lower is better)
Translates to: LLPSWLSAQWWS*SGPGGIERTYV
Trigger: TACATAAGTCCTTTCAATTCCACCAGGGCCAGAGCAGCTCCACCACTGTGCACTTAGCCATGATGGCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR-3UTR CAA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCAGTGACTTTGGCCAGCTaGTCAGAGTGTCTACAGTAT +
Preference number: 3 (lower is better)
Translates to: FKGVGELVNLGPQEALRPVTLAS*SECLQY
Trigger: ATACTGTAGACACTCTGACAAGCTGGCCAAAGTCAC...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
3UTR GCA 72 bp CAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTaGTTTGTAGCCTGTCTGCTCTGCACACATGTACAC +
Preference number: 3 (lower is better)
Translates to: QKVPTTWLSVDL*FVACLLCTHVH
Trigger: GTGTACATGTGTGCAGAGCAGACAGGCTACAAAGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 72 bp AAGCCTCTCCATAGGGAACAGAAAGTTCCAACTACCTaGCTGTCTGTCGATCTCTGCTTTGTAGCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: KPLHREQKVPTT*LSVDLCFVACL
Trigger: CAGACAGGCTACAAAGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGAGAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR GCA 72 bp TCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTaGAACTATAGCTACCTCATTAGGTCAAGGCTGACC +
Preference number: 3 (lower is better)
Translates to: SKLILISELSLG*NYSYLIRSRLT
Trigger: GGTCAGCCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
3UTR CCA 72 bp CCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTaGTTTCTGTTGCCATCATGGCTAAGTGCACAGTGG +
Preference number: 3 (lower is better)
Translates to: PSASKYLRNCVS*FLLPSWLSAQW
Trigger: CCACTGTGCACTTAGCCATGATGGCAACAGAAACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
3UTR TCA 72 bp CCTTGGTTACTAGGCCTGGCCAAATCATTGTCTAGCTaGAACCGTGGGCCTCAGTTTCTTTATCTGTTAAAT +
Preference number: 3 (lower is better)
Translates to: PWLLGLAKSLSS*NRGPQFLYLLN
Trigger: ATTTAACAGATAAAGAAACTGAGGCCCACGGTTTCAGCTAGACAATGATTTGGCCAGGCCTAGTAACCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR GCA 90 bp CTAAGTGCACAGTGGTGGAGCTGCTCTGGCCGTGGATGCCCGGGCCAGACCCCTTGCTCTGGCCGTGGATaGCCGGGCCAGACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSAQWWSCSGRGCPGQTPCSGRG*PGQTPS
Trigger: AGAAGGGGTCTGGCCCGGGCATCCACGGCCAGAGCA...AGGGGTCTGGCCCGGGCATCCACGGCCAGAGCAGCTCCACCACTGTGCACTTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS-3UTR CCA 90 bp TTGCTCCATCCTGGTCAGGACCAGCTGAGGGCTTGGAAAACCCCCAGGCCCAGCTGGGCGCCGCTGATGTaGCCCACACTCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLHPGQDQLRAWKTPRPSWAPLM*PTLCAS
Trigger: GCTGGCGCAGAGTGTGGGCCACATCAGCGGCGCCCA...GCTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTCCTGACCAGGATGGAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TTGCCATCATGGCTAAGTGCACAGTGGTGGAGCTGCTCTGGCCGTGGATGCCCGTGGCGGTGGCGACGATaGCCCCCACGCACTGGGCGA +
Preference number: 4 (lower is better)
Translates to: LPSWLSAQWWSCSGRGCPWRWRR*PPRTGR
Trigger: TCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCA...CGGGCATCCACGGCCAGAGCAGCTCCACCACTGTGCACTTAGCCATGATGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS-3UTR CCA 90 bp CTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCTGGCCAAACAGCCGGGTTGAGGTaGGCGCCGCTGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVVQGVARDRALVTRPGQTAGLR*APLMWP
Trigger: GGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGT...TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp CTGGCACACCTCCCATCATGCTCTGAGGGGCGACTAGCAGGTGGGTCCCTTTCTGCTGGAGGGTCCCGATaGTCTCGATGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LAHLPSCSEGRLAGGSLSAGGSR*SRCPGP
Trigger: AGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGC...AGAAAGGGACCCACCTGCTAGTCGCCCCTCAGAGCATGATGGGAGGTGTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000652696.1
CDS-3UTR CCA 90 bp CTAAGTGCACAGTGGTGGAGCTGCTCTGGCCGTGGATGCCCGGGCCAGACCCCTACGCATAGCACCAGCTaGAGGGTCCCGATGATCTCG +
Preference number: 4 (lower is better)
Translates to: LSAQWWSCSGRGCPGQTPTHSTS*RVPMIS
Trigger: CGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGT...AGGGGTCTGGCCCGGGCATCCACGGCCAGAGCAGCTCCACCACTGTGCACTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS-3UTR CCA 90 bp GGGACGATTCCAAGGTCAGGCAGTAAGTCCGAGCGGGTCAGGGGCTTGGGAGCAGACCAGCTGAGGGCTTaGAAAACCCCCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GTIPRSGSKSERVRGLGADQLRA*KTPRPS
Trigger: GCTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTC...TGCTCCCAAGCCCCTGACCCGCTCGGACTTACTGCCTGACCTTGGAATCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp ATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCAGGCAGGCTGGAGGGTCCCGATaGTCTCGATGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: MQSRQMQGLGVQQPRTRQAGGSR*SRCPGP
Trigger: AGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGC...CTGCCTGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp AAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGTGCTGGCAGGGGGCTTaGCCTGAGACCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: KLEMRGISLVVQGVARDRCWQGA*PETAAG
Trigger: CCCGGCAGCGGTCTCAGGCCAAGCCCCCTGCCAGCA...CCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CCTGGTCAGGACCAGCTGAGGGCTTGGAAAACCCCCAGGCCCAGCAAGGGCATCGGGGCGACTAGCAGGTaGGTCCCTTTCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: PGQDQLRAWKTPRPSKGIGATSR*VPFFHL
Trigger: GAGGTGAAAGAAAGGGACCCACCTGCTAGTCGCCCC...GATGCCCTTGCTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTCCTGACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGGCAGGGGGCTTGGCCTaGGACCGCTGCCGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWAGGLA*DRCRVL
Trigger: GAGCACCCGGCAGCGGTCTCAGGCCAAGCCCCCTGC...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR TCA 90 bp GCCGGTCCCTGCCACTTTGCAGAAGGAGGTCACTCAGGCCCTGATATAGGGACGTCCCCACCGGGTATTTaGAGCCCAGGGCAGAACCGA +
Preference number: 4 (lower is better)
Translates to: AGPCHFAEGGHSGPDIGTSPPGI*SPGQNR
Trigger: TCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGA...CGTCCCTATATCAGGGCCTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp AATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTCCTTCACGCGGTCTGTaGGGTCACTGCTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: NERNQPRGPGSSQRQGLGPSRGL*GHCCVG
Trigger: CCCCACGCAGCAGTGACCTCACAGACCGCGTGAAGG...ACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR GCA 90 bp GGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCCAGCAAGGGCATCTaGCTCCATGGGCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: GISLVVQGVARDRALVTRPSKGI*LHGLTC
Trigger: GCAGGTCAGCCCATGGAGGCAGATGCCCTTGCTGGG...CCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCATGCTGGCAGGGGGCTTaGCCTGAGACCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: HICRADRCRALVCSSLEPCWQGA*PETAAG
Trigger: CCCGGCAGCGGTCTCAGGCCAAGCCCCCTGCCAGCA...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGCAGCACTCTGCGCCAGCGTaGCGATGCTCAGCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: CGDSHAPGERTQGKWKEQHSAPA*RCSARR
Trigger: CCTTCGGGCTGAGCATCGCCACGCTGGCGCAGAGTG...CTGCTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAGCCGGGTTGAGGTaGGCGCCGCTGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TIGSKVHVRKRRRAVPKGTAGLR*APLMWP
Trigger: GGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGT...GCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCTGGCGGTGGCGACGATaGCCCCCACGCACTGGGCGA +
Preference number: 4 (lower is better)
Translates to: FGQLVRVSTVWISPLPSLWRWRR*PPRTGR
Trigger: TCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCA...GAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CCA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCATGGCGGTGGCGACGATaGCCCCCACGCACTGGGCGA +
Preference number: 4 (lower is better)
Translates to: HICRADRCRALVCSSLEPWRWRR*PPRTGR
Trigger: TCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCA...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp GGGACGATTCCAAGGTCAGGCAGTAAGTCCGAGCGGGTCAGGGGCTTGGGAGCAACGCATAGCACCAGCTaGAGGGTCCCGATGATCTCG +
Preference number: 4 (lower is better)
Translates to: GTIPRSGSKSERVRGLGATHSTS*RVPMIS
Trigger: CGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGT...TGCTCCCAAGCCCCTGACCCGCTCGGACTTACTGCCTGACCTTGGAATCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGCCCCTGCCCCCTACGTaGATGCCCGGGCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWPLPPT*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACGTAGGGGGCAGGGG...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp GGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGGTCCCCAGGAAGCTGTaGATGCCCGGGCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: GSKVHVRKRRRAVPKGTKVPRKL*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACAGCTTCCTGGGGAC...CTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652696.1
CDS-3UTR TCA 90 bp GGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCCCTTCACGCGGTCTGTaGGGTCACTGCTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GARCMLGKEGGPCPKAQSPSRGL*GHCCVG
Trigger: CCCCACGCAGCAGTGACCTCACAGACCGCGTGAAGG...GCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR TCA 90 bp GAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACCCTTCACGCGGTCTGTaGGGTCACTGCTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EKLEMRGISLVVQGVARDPSRGL*GHCCVG
Trigger: CCCCACGCAGCAGTGACCTCACAGACCGCGTGAAGG...GTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR GCA 90 bp CCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGTTTGCACTTAGGGGCTGCATGTGGCCCACACTCTaGGCCAGCGTGGCGATGCTC +
Preference number: 4 (lower is better)
Translates to: PGLDHVFWTHAVFALRGCMWPTL*ASVAML
Trigger: GAGCATCGCCACGCTGGCGCAGAGTGTGGGCCACAT...GCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACTCGCTGGCCATGCTaGCAGGGGGCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TIGSKVHVRKRRRAVPKGTRWPC*QGAWPE
Trigger: CTCAGGCCAAGCCCCCTGCCAGCATGGCCAGCGAGT...GCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp AACTTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCCCTGCCCCCTACGTaGATGCCCGGGCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: NFKGVGELVNLGPQEALRPLPPT*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACGTAGGGGGCAGGGG...CCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp TTGCTCCATCCTGGTCAGGACCAGCTGAGGGCTTGGAAAACCCCCAGGCCCAGCCGACAGTCATGCCCCTaGGGAAAGAACACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LLHPGQDQLRAWKTPRPSRQSCP*GKNTGQ
Trigger: TTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCG...GCTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTCCTGACCAGGATGGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TTCCAAGGTCAGGCAGTAAGTCCGAGCGGGTCAGGGGCTTGGGAGCAAGCAGAAGGGCATCTGCCTCCATaGGCTGACCTGCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: FQGQAVSPSGSGAWEQAEGHLPP*ADLHQG
Trigger: ACCCTGATGCAGGTCAGCCCATGGAGGCAGATGCCC...TTCTGCTTGCTCCCAAGCCCCTGACCCGCTCGGACTTACTGCCTGACCTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp ATCTGCCTCCATGGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGTCCCCACCGGGTATTTaGAGCCCAGGGCAGAACCGA +
Preference number: 4 (lower is better)
Translates to: ICLHGLTCIRVFLSSGFGSPPGI*SPGQNR
Trigger: TCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGA...CCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCATGGAGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp ACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGCTGGAGGGTCCCGATaGTCTCGATGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TEKLEMRGISLVVQGVARAGGSR*SRCPGP
Trigger: AGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGC...TCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR TCA 90 bp TTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCCCTTCACGCGGTCTGTaGGGTCACTGCTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: FGQLVRVSTVWISPLPSLPSRGL*GHCCVG
Trigger: CCCCACGCAGCAGTGACCTCACAGACCGCGTGAAGG...GAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR GCA 90 bp ATCTGCCTCCATGGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGGAGACCGCTGCCGGGTaGTCAATTCCCTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: ICLHGLTCIRVFLSSGFGETAAG*SIPSES
Trigger: GCTCTCAGAGGGAATTGAGCACCCGGCAGCGGTCTC...CCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCATGGAGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCATGTGGCCCACACTCTaGGCCAGCGTGGCGATGCTC +
Preference number: 4 (lower is better)
Translates to: GARCMLGKEGGPCPKAQSMWPTL*ASVAML
Trigger: GAGCATCGCCACGCTGGCGCAGAGTGTGGGCCACAT...GCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCGGTCCCTGCCACTTTaGAGAAGGAGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: GISLVVQGVARDRALVTRRSLPL*RRRSLR
Trigger: CCTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCG...CCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GCAAGCAGAACTGAAGGAGCAAAGCTTGCCCCCTCCACTGCACCTCCTGGGATCCGGTCCCTGCCACTTTaGAGAAGGAGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: ASRTEGAKLAPSTAPPGIRSLPL*RRRSLR
Trigger: CCTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCG...GATCCCAGGAGGTGCAGTGGAGGGGGCAAGCTTTGCTCCTTCAGTTCTGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGGCACAGTGGTGGAGCTaGTCTGGCCCTGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: ACGDSHAPGERTQGKWKEAQWWS*SGPGGI
Trigger: AATTCCACCAGGGCCAGAGCAGCTCCACCACTGTGC...CTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGTGCAGAGCAGACAGATaGAGGGCCTTGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HVHRGVWRQSCPWGKNTGCRADR*RALVCS
Trigger: GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCA...CCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCACTCGCTGGCCATGCTaGCAGGGGGCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TLASLSECLQYGFHPSPPTRWPC*QGAWPE
Trigger: CTCAGGCCAAGCCCCCTGCCAGCATGGCCAGCGAGT...GGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CCA 90 bp CCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGTTTGCACTTAGGGGCTGCTCCTGGACCGCCGTCTaGTTGTTCCCCACCGGGTAT +
Preference number: 4 (lower is better)
Translates to: PGLDHVFWTHAVFALRGCSWTAV*LFPTGY
Trigger: ATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGA...GCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCTGGCCAAACCTTCACGTTGTCCTaGACCGCCGTCTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LVVQGVARDRALVTRPGQTFTLS*TAVWLF
Trigger: GAACAACCAGACGGCGGTCCAGGACAACGTGAAGGT...TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCTCAACACTCTGCGCCAGCGTaGCGATGCTCAGCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LTCIRVFLSSGFGLQTAQHSAPA*RCSARR
Trigger: CCTTCGGGCTGAGCATCGCCACGCTGGCGCAGAGTG...TTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGAGCTCATGAGCAAGGGAAGAGCTTGCTCCATCCTGGTCAGGACCAGCTGAGGACGCATAGCACCAGCTaGAGGGTCCCGATGATCTCG +
Preference number: 4 (lower is better)
Translates to: GAHEQGKSLLHPGQDQLRTHSTS*RVPMIS
Trigger: CGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGT...CCTCAGCTGGTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCTCATGAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATAGCTACCCCCTGCCCCCTACGTaGATGCCCGGGCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: PSKLILISELSLGCNYSYPLPPT*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACGTAGGGGGCAGGGG...GTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR TCA 90 bp GAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGCAGGGGGCTTGGCCTaGGACCGCTGCCGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: EIPTPKRHICRADRCRALAGGLA*DRCRVL
Trigger: GAGCACCCGGCAGCGGTCTCAGGCCAAGCCCCCTGC...CAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGGGAGGAGGTGATGCCTaGGAGGATGGCGGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWGGGDA*EDGGGD
Trigger: GTCGCCACCGCCATCCTCTCAGGCATCACCTCCTCC...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR TCA 90 bp GCAAGTGGAAAGAGCAGCCCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGTCTCCACCCTGGAGTTaGTGTCGTCGGCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: ASGKSSPGLDHVFWTHAVSPPWS*CRRHPG
Trigger: ACCTGGATGCCGACGACATCAACTCCAGGGTGGAGA...CACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp ATCTGCCTCCATGGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGGGGAGCAAGCAGAACTaGAGGAGCAAAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ICLHGLTCIRVFLSSGFGGSKQN*RSKACP
Trigger: GGGGCAAGCTTTGCTCCTTCAGTTCTGCTTGCTCCC...CCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCATGGAGGCAGAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp AGGCCTGTAGAGCTCTGCCGGTCCCTGCCACTTTGCAGAAGGAGGTCACTCAGGCTGATCAGGAGCTCATaGGCAAGGGAAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: RPVELCRSLPLCRRRSLRLIRSS*AREELA
Trigger: AGCAAGCTCTTCCCTTGCTCATGAGCTCCTGATCAG...CCTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp CTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCTGGCCAACTGAGAAGCTGGAAATaGGAGGAATCAGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LVVQGVARDRALVTRPGQLRSWK*EESASW
Trigger: CCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAG...TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR GCA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCTGCCCCCTACGTGGATaGCCGGGCCAGACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TPKRHICRADRCRALVCSCPLRG*PGQTPS
Trigger: AGAAGGGGTCTGGCCCGGGCATCCACGTAGGGGGCA...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR GCA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCATGCCCCCTACGTGGATaGCCGGGCCAGACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FKGVGELVNLGPQEALRPCPLRG*PGQTPS
Trigger: AGAAGGGGTCTGGCCCGGGCATCCACGTAGGGGGCA...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR GCA 90 bp GGAAGGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTAGCTCTGCCGGTCCCTaGCACTTTGCAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GRLWPGVIQQACAGYSAASSAGP*HFAEGG
Trigger: ACCTCCTTCTGCAAAGTGGCAGGGACCGGCAGAGCT...AGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGTCCCCTCCAGGTCAATaGAGAGGGAAGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GSKVHVRKRRRAVPKGTKSPPGQ*RGKAVA
Trigger: GGCCACAGCCTTCCCTCTGCATTGACCTGGAGGGGA...CTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGAGCTCATGAGCAAGGGAAGAGCTTGCTCCATCCTGGTCAGGACCAGCTGAGGACCTTCACGTTGTCCTaGACCGCCGTCTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GAHEQGKSLLHPGQDQLRTFTLS*TAVWLF
Trigger: GAACAACCAGACGGCGGTCCAGGACAACGTGAAGGT...CCTCAGCTGGTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCTCATGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCCGGAAGATGCTGATCTaGCAGCTGAGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TIGSKVHVRKRRRAVPKGRKMLI*QLSSSP
Trigger: GGGGCTGCTGCTCAGCTGCCAGATCAGCATCTTCCG...GCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCCGGAAGATGCTGATCTaGCAGCTGAGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GARCMLGKEGGPCPKAQSRKMLI*QLSSSP
Trigger: GGGGCTGCTGCTCAGCTGCCAGATCAGCATCTTCCG...GCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGAAGGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTGAGGTCACTGCTGCGTaGGGCCAGGATGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: GRLWPGVIQQACAGYSAAEVTAA*GQDEVV
Trigger: TACGACTTCATCCTGGCCCCACGCAGCAGTGACCTC...AGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TGCTCTGAGGGGCGACTAGCAGGTGGGTCCCTTTCTTTCACCTCCTCCACAACTTCATACTCCTCCACCTaGCCGCTGGTCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: CSEGRLAGGSLSFTSSTTSYSST*PLVHTF
Trigger: GAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGA...AGTTGTGGAGGAGGTGAAAGAAAGGGACCCACCTGCTAGTCGCCCCTCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000652696.1
CDS-3UTR CCA 90 bp GCAAGTGGAAAGAGCAGCCCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGAGCGGGTCAGGGGCTTaGGAGCAAGCAGAACTGAAG +
Preference number: 4 (lower is better)
Translates to: ASGKSSPGLDHVFWTHAVSGSGA*EQAELK
Trigger: CTTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCT...CACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGTTTGCACTTAGGGGCTGCAGCGGGTCAGGGGCTTaGGAGCAAGCAGAACTGAAG +
Preference number: 4 (lower is better)
Translates to: PGLDHVFWTHAVFALRGCSGSGA*EQAELK
Trigger: CTTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCT...GCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAGACCAGCTGAGGGCTTaGAAAACCCCCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IGSKVHVRKRRRAVPKGTDQLRA*KTPRPS
Trigger: GCTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTC...TGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCCGCAGGCCAGGGTATTCTaGGGTACCAAGACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: WPACQSVYSMDFTPPLPPQARVF*GTKTRG
Trigger: GCCTCTGGTCTTGGTACCCCAGAATACCCTGGCCTG...CGGAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409611.1
CDS-3UTR CCA 90 bp AATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTCTAAGTGCACAGTGGTaGAGCTGCTCTGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: NERNQPRGPGSSQRQGLGLSAQW*SCSGRG
Trigger: TCCACGGCCAGAGCAGCTCCACCACTGTGCACTTAG...ACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS-3UTR TCA 90 bp AACTTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCTTCACGCGGTCTGTaGGGTCACTGCTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: NFKGVGELVNLGPQEALRPSRGL*GHCCVG
Trigger: CCCCACGCAGCAGTGACCTCACAGACCGCGTGAAGG...CCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp GCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGGCTGATCCTGATCTCTaGACTGTCCTTGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: ACGDSHAPGERTQGKWKEADPDL*TVLGLQ
Trigger: TTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGC...CTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp GCAAGCAGAACTGAAGGAGCAAAGCTTGCCCCCTCCACTGCACCTCCTGGGATCGCTGATCCTGATCTCTaGACTGTCCTTGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: ASRTEGAKLAPSTAPPGIADPDL*TVLGLQ
Trigger: TTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGC...GATCCCAGGAGGTGCAGTGGAGGGGGCAAGCTTTGCTCCTTCAGTTCTGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp ACCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCGGAAGCTCCTGGAGTTaGTGTCGTCGGCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: TIGSKVHVRKRRRAVPKGGSSWS*CRRHPG
Trigger: ACCTGGATGCCGACGACATCAACTCCAGGAGCTTCC...GCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651610.1
CDS-3UTR GCA 90 bp ACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGAGACCGCTGCCGGGTaGTCAATTCCCTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: TEKLEMRGISLVVQGVARETAAG*SIPSES
Trigger: GCTCTCAGAGGGAATTGAGCACCCGGCAGCGGTCTC...TCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp ACACATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAAGCTCTGCCGGTCCCTaGCACTTTGCAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: THVHRGVWRQSCPWGKNTSSAGP*HFAEGG
Trigger: ACCTCCTTCTGCAAAGTGGCAGGGACCGGCAGAGCT...TGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCA +
Preference number: 4 (lower is better)
Translates to: TLASLSECLQYGFHPSPPSMPRP*PEFTPS
Trigger: TGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGA...GGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp GGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGGAGGTCACTGCTGCGTaGGGCCAGGATGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: GSKVHVRKRRRAVPKGTKEVTAA*GQDEVV
Trigger: TACGACTTCATCCTGGCCCCACGCAGCAGTGACCTC...CTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR CCA 90 bp GCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGCAGACCCCTTCTATTTaGGCTTCATCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: ACGDSHAPGERTQGKWKEQTPSI*ASSPPW
Trigger: CCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTG...CTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCCTCCACTGCACCTCCTaGGATCTCTTCCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TIGSKVHVRKRRRAVPKGLHCTS*DLFPLQ
Trigger: TTGGAGGGGGAAGAGATCCCAGGAGGTGCAGTGGAG...GCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GAAACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCGTACACAGAGGCGTGTaGCGACAGTCATGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ETEKLEMRGISLVVQGVAVHRGV*RQSCPW
Trigger: CCAGGGGCATGACTGTCGCCACACGCCTCTGTGTAC...GGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTGCTGGAGGGTCCCGATaGTCTCGATGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGAGGSR*SRCPGP
Trigger: AGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGC...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR TCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACGCTGGAGGGTCCCGATaGTCTCGATGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHAGGSR*SRCPGP
Trigger: AGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGC...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp ACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGATCTCCACCCTGGAGTTaGTGTCGTCGGCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: TEKLEMRGISLVVQGVARSPPWS*CRRHPG
Trigger: ACCTGGATGCCGACGACATCAACTCCAGGGTGGAGA...TCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR TCA 90 bp GGCAAGTGGAAAGAGCAGCCCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTCAGATCTTGGGGAAGTaGCTTTGGCCAGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GKWKEQPWSRPRLLDPCCQILGK*LWPACQ
Trigger: CTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTG...ACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR TCA 90 bp TGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCCGCAGATCTTGGGGAAGTaGCTTTGGCCAGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: WPACQSVYSMDFTPPLPPQILGK*LWPACQ
Trigger: CTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTG...CGGAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp GAAACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCGGGAGCAAGCAGAACTaGAGGAGCAAAGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ETEKLEMRGISLVVQGVAGSKQN*RSKACP
Trigger: GGGGCAAGCTTTGCTCCTTCAGTTCTGCTTGCTCCC...GGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp GCAAGTGGAAAGAGCAGCCCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGCTGAGAAGCTGGAAATaGGAGGAATCAGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: ASGKSSPGLDHVFWTHAVLRSWK*EESASW
Trigger: CCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAG...CACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCATCAGCCAGGTCATTaGGGCCAAGCGAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: DFGQLVRVSTVWISPLPSHQPGH*GQASSQ
Trigger: CTGGGAACTCGCTTGGCCGCAATGACCTGGCTGATG...GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR GCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACTGCCCCCTACGTGGATaGCCGGGCCAGACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHCPLRG*PGQTPS
Trigger: AGAAGGGGTCTGGCCCGGGCATCCACGTAGGGGGCA...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR GCA 90 bp GTGTGCAGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGAGGCCTGTAGAGCTCTaGCGGTCCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: VCRCDALVIVKGLLVVPLRPVEL*RSLPLC
Trigger: GCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCT...CAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCTGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCTGCAGGGCCTTGGTGTaGAGCAGCCTAGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: TPKRHICRADRCRALVCSCRALV*SSLEPG
Trigger: GCCTGGTTCTAGGCTGCTGCACACCAAGGCCCTGCA...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR GCA 90 bp AGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAATGCAGGGCCTTGGTGTaGAGCAGCCTAGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: SKVHVRKRRRAVPKGTKQCRALV*SSLEPG
Trigger: GCCTGGTTCTAGGCTGCTGCACACCAAGGCCCTGCA...TTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCATGCAGAGCAGACAGATaGAGGGCCTTGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HICRADRCRALVCSSLEPCRADR*RALVCS
Trigger: GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCA...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp GAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGTGGGCGCCGCTGATGTaGCCCACACTCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: EIPTPKRHICRADRCRALWAPLM*PTLCAS
Trigger: GCTGGCGCAGAGTGTGGGCCACATCAGCGGCGCCCA...CAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCA +
Preference number: 4 (lower is better)
Translates to: TPKRHICRADRCRALVCSSMPRP*PEFTPS
Trigger: TGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGA...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCATCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCA +
Preference number: 4 (lower is better)
Translates to: FKGVGELVNLGPQEALRPSMPRP*PEFTPS
Trigger: TGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGA...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp TGCAGGTCTGGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACGCATAGCACCAGCTaGAGGGTCCCGATGATCTCG +
Preference number: 4 (lower is better)
Translates to: CRSGRSWGSDFGQLVRVSTHSTS*RVPMIS
Trigger: CGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGT...AGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp TGCAGGTCTGGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTGAGGTCACTGCTGCGTaGGGCCAGGATGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: CRSGRSWGSDFGQLVRVSEVTAA*GQDEVV
Trigger: TACGACTTCATCCTGGCCCCACGCAGCAGTGACCTC...AGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp TTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCTCATACTCCTCCACCTaGCCGCTGGTCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: FGQLVRVSTVWISPLPSLSYSST*PLVHTF
Trigger: GAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGA...GAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp GAAACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCTCATACTCCTCCACCTaGCCGCTGGTCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: ETEKLEMRGISLVVQGVASYSST*PLVHTF
Trigger: GAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGA...GGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp ATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACATCATACTCCTCCACCTaGCCGCTGGTCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: IGSKVHVRKRRRAVPKGTSYSST*PLVHTF
Trigger: GAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGA...TGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR CCA 90 bp ACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGGGGCGACTAGCAGGTaGGTCCCTTTCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: TEKLEMRGISLVVQGVARGATSR*VPFFHL
Trigger: GAGGTGAAAGAAAGGGACCCACCTGCTAGTCGCCCC...TCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCGGGGCGACTAGCAGGTaGGTCCCTTTCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: FGQLVRVSTVWISPLPSLGATSR*VPFFHL
Trigger: GAGGTGAAAGAAAGGGACCCACCTGCTAGTCGCCCC...GAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp ATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACACTCCACTGCACCTCCTaGGATCTCTTCCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: IGSKVHVRKRRRAVPKGTLHCTS*DLFPLQ
Trigger: TTGGAGGGGGAAGAGATCCCAGGAGGTGCAGTGGAG...TGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGACTAAGTGCACAGTGGTaGAGCTGCTCTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TEKLEMRGISLVVQGVARLSAQW*SCSGPG
Trigger: ACCAGGGCCAGAGCAGCTCCACCACTGTGCACTTAG...TCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp GTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAATTACGGTCTCCACCCTGGAGTTaGTGTCGTCGGCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: VHVRKRRRAVPKGTKQLRSPPWS*CRRHPG
Trigger: ACCTGGATGCCGACGACATCAACTCCAGGGTGGAGA...CCGTAATTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp CCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGTTTGCACTTAGGGGCTGCGACCTGTGTCTACACTaGCAAGAGGGAGTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PGLDHVFWTHAVFALRGCDLCLH*QEGVEN
Trigger: GTTCTCTACTCCCTCTTGTCAGTGTAGACACAGGTC...GCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp CCCCCTCCAAGCACCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGACCTGTGTCTACACTaGCAAGAGGGAGTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PPPSTIGSKVHVRKRRRADLCLH*QEGVEN
Trigger: GTTCTCTACTCCCTCTTGTCAGTGTAGACACAGGTC...GGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGTGCTTGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp CTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCTCAATCATTAGGTCAAGGCTaGCCTCTCCCCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LTCIRVFLSSGFGLQTAQSLGQG*PLPSRS
Trigger: TGACCTGGAGGGGAGAGGTCAGCCTTGACCTAATGA...TTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp AGCTCTGCCGGTCCCTGCCACTTTGCAGAAGGAGGTCACTCAGGCCCTGATATAAAAGAAGGAGGGCCGTaGCCAAAGGCACAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SSAGPCHFAEGGHSGPDIKEGGP*PKAQSN
Trigger: ATTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTT...TATATCAGGGCCTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCGGCAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CACAACTTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTGTGAGGCCTGTAGAGCTCTaGCGGTCCCTGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: HNFKGVGELVNLGPQEAVRPVEL*RSLPLC
Trigger: GCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCT...CACAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAAGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652696.1
CDS-3UTR GCA 90 bp ACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGATTTGCACTTAGGGGCTaGAGGCCTGTAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TEKLEMRGISLVVQGVARFALRG*RPVELC
Trigger: GCAGAGCTCTACAGGCCTGCAGCCCCTAAGTGCAAA...TCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp TCCTTGGGCTGCAACTATAGCTACCTCATTAGGTCAAGGCTGACCTCTCCCCTCGTGTGGCGACAGTCATaGCCCTGGGGAAAGAACACA +
Preference number: 4 (lower is better)
Translates to: SLGCNYSYLIRSRLTSPLVWRQS*PWGKNT
Trigger: TGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACAC...GAGGGGAGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAAGTAGCCTGTCTGCTCTaGACACATGTACACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GCGQGSYSKPVQVIQLLKVACLL*THVHRG
Trigger: GCCTCTGTGTACATGTGTGCAGAGCAGACAGGCTAC...TTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp AATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTCTGTCTGTCGATCTCTaGTTTGTAGCCTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NERNQPRGPGSSQRQGLGLSVDL*FVACLL
Trigger: GAGCAGACAGGCTACAAAGCAGAGATCGACAGACAG...ACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCAGCAAGGGCATCTaGCTCCATGGGCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHPSKGI*LHGLTC
Trigger: GCAGGTCAGCCCATGGAGGCAGATGCCCTTGCTGGG...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR GCA 90 bp CTCTCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTTCCCCTCCAGGTCAATaGAGAGGGAAGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LSIGNRKFQLPGCLSISASPPGQ*RGKAVA
Trigger: GGCCACAGCCTTCCCTCTGCATTGACCTGGAGGGGA...AGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp AGGCCTGTAGAGCTCTGCCGGTCCCTGCCACTTTGCAGAAGGAGGTCACTCAGGGAACTGTCCTTGGGCTaGAACTATAGCTACCTCATT +
Preference number: 4 (lower is better)
Translates to: RPVELCRSLPLCRRRSLRELSLG*NYSYLI
Trigger: AATGAGGTAGCTATAGTTGCAGCCCAAGGACAGTTC...CCTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGCACAGTGGTGGAGCTaGTCTGGCCGTGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: EIPTPKRHICRADRCRALAQWWS*SGRGCP
Trigger: CGGGCATCCACGGCCAGAGCAGCTCCACCACTGTGC...CAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS-3UTR CCA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCAACGCATAGCACCAGCTaGAGGGTCCCGATGATCTCG +
Preference number: 4 (lower is better)
Translates to: FKGVGELVNLGPQEALRPTHSTS*RVPMIS
Trigger: CGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGT...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp AAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTGAGGTCACTGCTGCGTaGGGCCAGGATGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: KETYMQSRQMQGLGVQQPEVTAA*GQDEVV
Trigger: TACGACTTCATCCTGGCCCCACGCAGCAGTGACCTC...AGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp AGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAATCATACTCCTCCACCTaGCCGCTGGTCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: SKVHVRKRRRAVPKGTKQSYSST*PLVHTF
Trigger: GAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGA...TTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR CCA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGGGGGCGACTAGCAGGTaGGTCCCTTTCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWGATSR*VPFFHL
Trigger: GAGGTGAAAGAAAGGGACCCACCTGCTAGTCGCCCC...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp AGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAAGGGGCGACTAGCAGGTaGGTCCCTTTCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: SKVHVRKRRRAVPKGTKQGATSR*VPFFHL
Trigger: GAGGTGAAAGAAAGGGACCCACCTGCTAGTCGCCCC...TTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR CCA 90 bp AATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTCTAGACCACGTCTTCTaGACCCATGCTGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: NERNQPRGPGSSQRQGLGLDHVF*THAVFA
Trigger: TGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAG...ACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGTGGAAAGAGCAGCCCTaGTCTAGACCACGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSKVHVRKRRRAVPKGTKWKEQP*SRPRLL
Trigger: CAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCA...CTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCGACAGTCATGCCCCTaGGGAAAGAACACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DFGQLVRVSTVWISPLPSRQSCP*GKNTGQ
Trigger: TTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCG...GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CCA 90 bp AGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAATGCCTCTGATGTACACAGAGGCGTGTaGCGACAGTCATGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RGHTASLCRLFSCSNASDVHRGV*RQSCPW
Trigger: CCAGGGGCATGACTGTCGCCACACGCCTCTGTGTAC...ATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCCCAGAGACAGGGCCTTaGTTACTAGGCCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: TLASLSECLQYGFHPSPPPETGP*LLGLAK
Trigger: TTTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGG...GGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACAGGCCTGGGGTGAGCTaGGGCCTTTGCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHRPGVS*GLCIQL
Trigger: CAGCTGGATGCAAAGGCCCCAGCTCACCCCAGGCCT...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409611.1
CDS-3UTR CCA 90 bp AATGAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCGTGGTGGAGCTGCTCTaGCCGTGGATGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NEIPTPKRHICRADRCRAVVELL*PWMPGP
Trigger: TGGCCCGGGCATCCACGGCCAGAGCAGCTCCACCAC...GGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS-3UTR TCA 90 bp AACTTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGTCTCCACCCTGGAGTTaGTGTCGTCGGCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: NFKGVGELVNLGPQEALRSPPWS*CRRHPG
Trigger: ACCTGGATGCCGACGACATCAACTCCAGGGTGGAGA...CCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp GAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCTCTCCACCCTGGAGTTaGTGTCGTCGGCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVTLASLSECLQYGFHPSSPPWS*CRRHPG
Trigger: ACCTGGATGCCGACGACATCAACTCCAGGGTGGAGA...GGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp GGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCCTGCTCAAATGCCTCTaGTCAGGAGCTCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: GARCMLGKEGGPCPKAQSLLKCL*SGAHEQ
Trigger: TTGCTCATGAGCTCCTGATCAGAGGCATTTGAGCAG...GCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp CCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACTGCTCAAATGCCTCTaGTCAGGAGCTCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: PLGARCMLGKEGGPCPKALLKCL*SGAHEQ
Trigger: TTGCTCATGAGCTCCTGATCAGAGGCATTTGAGCAG...TGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp TCCTTGGGCTGCAACTATAGCTACCTCATTAGGTCAAGGCTGACCTCTCCCCTCCTGAGAAGCTGGAAATaGGAGGAATCAGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SLGCNYSYLIRSRLTSPLLRSWK*EESASW
Trigger: CCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAG...GAGGGGAGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCGTAGCCTGTCTGCTCTaGACACATGTACACAGAGGC +
Preference number: 4 (lower is better)
Translates to: DFGQLVRVSTVWISPLPSVACLL*THVHRG
Trigger: GCCTCTGTGTACATGTGTGCAGAGCAGACAGGCTAC...GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR GCA 90 bp GCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGTGCAGGTTATTCAGCTaGTCAAATGCCTCTGATCAG +
Preference number: 4 (lower is better)
Translates to: ACGDSHAPGERTQGKWKECRLFS*SNASDQ
Trigger: CTGATCAGAGGCATTTGAGCAGCTGAATAACCTGCA...CTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGGAACTGTCCTTGGGCTaGAACTATAGCTACCTCATT +
Preference number: 4 (lower is better)
Translates to: HVHRGVWRQSCPWGKNTGELSLG*NYSYLI
Trigger: AATGAGGTAGCTATAGTTGCAGCCCAAGGACAGTTC...CCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp AGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAATGCCTCTGATTGCAGAGCAGACAGATaGAGGGCCTTGGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RGHTASLCRLFSCSNASDCRADR*RALVCS
Trigger: GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCA...ATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp TGCTCTGAGGGGCGACTAGCAGGTGGGTCCCTTTCTTTCACCTCCTCCACAACTGAACATTCCACCCCATaGCCGACTGCATCTAAATTC +
Preference number: 4 (lower is better)
Translates to: CSEGRLAGGSLSFTSSTTEHSTP*PTASKF
Trigger: GAATTTAGATGCAGTCGGGCATGGGGTGGAATGTTC...AGTTGTGGAGGAGGTGAAAGAAAGGGACCCACCTGCTAGTCGCCCCTCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409611.1
ENST00000409899.5
CDS-3UTR GCA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCAGCCTTTGCATCCAGCTaGATCCAGGCCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: FKGVGELVNLGPQEALRPAFASS*IQARVF
Trigger: GAATACCCTGGCCTGGATGCAGCTGGATGCAAAGGC...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409611.1
CDS-3UTR GCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACGTGAGCTGGGGCCTTTaGATCCAGCTGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHVSWGL*IQLHPG
Trigger: GCCTGGATGCAGCTGGATGCAAAGGCCCCAGCTCAC...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409611.1
CDS-3UTR CCA 90 bp TCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTTTGTCCTGGACCGCCGTCTaGTTGTTCCCCACCGGGTAT +
Preference number: 4 (lower is better)
Translates to: SIGNRKFQLPGCLSISALSWTAV*LFPTGY
Trigger: ATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGA...CAAAGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp AGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGCTTCTACGGAAGATGCTGATCTaGCAGCTGAGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RCDALVIVKGLLVVPLLLRKMLI*QLSSSP
Trigger: GGGGCTGCTGCTCAGCTGCCAGATCAGCATCTTCCG...TAGAAGCAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp AACTTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGTCATACTCCTCCACCTaGCCGCTGGTCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: NFKGVGELVNLGPQEALRSYSST*PLVHTF
Trigger: GAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGA...CCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp CTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCTCAACAGACCCCTTCTATTTaGGCTTCATCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: LTCIRVFLSSGFGLQTAQQTPSI*ASSPPW
Trigger: CCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTG...TTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCCAGAGTGTCTACAGTATaGATTTCACCCCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LASLSECLQYGFHPSPPSRVSTV*ISPLPS
Trigger: GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCT...GGAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCATGGAAAGAGCAGCCCTaGTCTAGACCACGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HICRADRCRALVCSSLEPWKEQP*SRPRLL
Trigger: CAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCA...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCCCGTCTCTTTCCTTaGTCCAAGGCCTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: EVTLASLSECLQYGFHPSPRLFP*SKACLP
Trigger: TGGGAGACAGGCCTTGGACCAAGGAAAGAGACGGGG...GGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409899.5
3UTR CAA 72 bp GGTCTGGCAGATCTTGGGGAAGTGACTTTGGCCAGCTaGTCAGAGTGTCTACAGTATGGATTTCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLADLGEVTLAS*SECLQYGFHPS
Trigger: GGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp TGCTCAAATGCCTCTGATCAGGAGCTCATGAGCAAGGGAAGAGCTTGCTCCATCAGGTCACTCAGGCCCTaGTATAGGGACGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: CSNASDQELMSKGRACSIRSLRP*YRDDSK
Trigger: CTTGGAATCGTCCCTATATCAGGGCCTGAGTGACCT...GATGGAGCAAGCTCTTCCCTTGCTCATGAGCTCCTGATCAGAGGCATTTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp ATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAAGAAGGAGGGCCGTaGCCAAAGGCACAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: IGSKVHVRKRRRAVPKGTKEGGP*PKAQSN
Trigger: ATTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTT...TGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR GCA 90 bp AGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAATGCCTCTGATTTTGCACTTAGGGGCTaGAGGCCTGTAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGHTASLCRLFSCSNASDFALRG*RPVELC
Trigger: GCAGAGCTCTACAGGCCTGCAGCCCCTAAGTGCAAA...ATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp TGCTCTGAGGGGCGACTAGCAGGTGGGTCCCTTTCTTTCACCTCCTCCACAACTTGCAGGTTATTCAGCTaGTCAAATGCCTCTGATCAG +
Preference number: 4 (lower is better)
Translates to: CSEGRLAGGSLSFTSSTTCRLFS*SNASDQ
Trigger: CTGATCAGAGGCATTTGAGCAGCTGAATAACCTGCA...AGTTGTGGAGGAGGTGAAAGAAAGGGACCCACCTGCTAGTCGCCCCTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCCATACAGCAAGCCTGTaGAGGTTATTCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GARCMLGKEGGPCPKAQSHTASL*RLFSCS
Trigger: TGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATG...GCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp TCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATAGCTACCTCGCACAGTGGTGGAGCTaGTCTGGCCCTGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: SKLILISELSLGCNYSYLAQWWS*SGPGGI
Trigger: AATTCCACCAGGGCCAGAGCAGCTCCACCACTGTGC...GAGGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp AATGAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCCCAGGAAGCTGTGGATaGCCGGGCCAGACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NEIPTPKRHICRADRCRAPGSCG*PGQTPS
Trigger: AGAAGGGGTCTGGCCCGGGCATCCACAGCTTCCTGG...GGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652696.1
CDS-3UTR CCA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTAGACAAAGAGGGTCGTaGCCAGGAACTCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGRQRGS*PGTRPP
Trigger: TGGTGGCCGAGTTCCTGGCCACGACCCTCTTTGTCT...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTATGGCCCCCACGCACTaGGCGATGATGTACATGAGG +
Preference number: 4 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGMAPTH*AMMYMR
Trigger: CCTCATGTACATCATCGCCCAGTGCGTGGGGGCCAT...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp TCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCTCAAGTGCTCTTTGATAAACTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCA +
Preference number: 4 (lower is better)
Translates to: SFCPQALGFRQLKCSLINSMPRP*PEFTPS
Trigger: TGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGA...GTTTATCAAAGAGCACTTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GATATAGGGACGATTCCAAGGTCAGGCAGTAAGTCCGAGCGGGTCAGGGGCTTGACCCAGAAAATCCAGTaGTTGCTGAAGTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DIGTIPRSGSKSERVRGLTQKIQ*LLKLCV
Trigger: CACACACAACTTCAGCAACCACTGGATTTTCTGGGT...CAAGCCCCTGACCCGCTCGGACTTACTGCCTGACCTTGGAATCGTCCCTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACGAGGTCACTGCTGCGTaGGGCCAGGATGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHEVTAA*GQDEVV
Trigger: TACGACTTCATCCTGGCCCCACGCAGCAGTGACCTC...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp TCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTTTGGAGGTCACTGCTGCGTaGGGCCAGGATGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: SIGNRKFQLPGCLSISALEVTAA*GQDEVV
Trigger: TACGACTTCATCCTGGCCCCACGCAGCAGTGACCTC...CAAAGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGCAGACCCCTTCTATTTaGGCTTCATCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWQTPSI*ASSPPW
Trigger: CCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTG...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp TGCAGGTCTGGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTAGAGTGTCTACAGTATaGATTTCACCCCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CRSGRSWGSDFGQLVRVSRVSTV*ISPLPS
Trigger: GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCT...AGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp TTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCAGAGTGTCTACAGTATaGATTTCACCCCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: FGQLVRVSTVWISPLPSLRVSTV*ISPLPS
Trigger: GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCT...GAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp GCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGCCTTCACCCTCTAAATaGCTTCATTCTGCAATAGCA +
Preference number: 4 (lower is better)
Translates to: ACGDSHAPGERTQGKWKEPSPSK*LHSAIA
Trigger: TGCTATTGCAGAATGAAGCCATTTAGAGGGTGAAGG...CTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp AACTTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGAGAGATGCAAAAAGGTaGGAAGGCCCAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NFKGVGELVNLGPQEALRRDAKR*EGPAGD
Trigger: GTCCCCTGCTGGGCCTTCCCACCTTTTTGCATCTCT...CCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409611.1
CDS-3UTR CCA 90 bp CAGTTTCTTTATCTGTTAAATGAGCTAGAAGTTCCTGCTAGGGAATGGAGAAGAGAGCTGCTCTGGCCGTaGATGCCCGGGCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: QFLYLLNELEVPAREWRRELLWP*MPGPDP
Trigger: GGGGTCTGGCCCGGGCATCCACGGCCAGAGCAGCTC...TCTTCTCCATTCCCTAGCAGGAACTTCTAGCTCATTTAACAGATAAAGAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS-3UTR TCA 90 bp GAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCAGATCTTGGGGAAGTaGCTTTGGCCAGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: EVTLASLSECLQYGFHPSQILGK*LWPACQ
Trigger: CTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTG...GGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp ATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACACTTCAAGGGAGTGGGTaGATTGGTAAATCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: IGSKVHVRKRRRAVPKGTLQGSG*IGKSWS
Trigger: GGACCAAGATTTACCAATTCACCCACTCCCTTGAAG...TGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR TCA 90 bp GGAAGGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTGAGGGAGTAGAGAACTaGAGAATGAGCAAGATAATG +
Preference number: 4 (lower is better)
Translates to: GRLWPGVIQQACAGYSAAEGVEN*RMSKIM
Trigger: CATTATCTTGCTCATTCTTCAGTTCTCTACTCCCTC...AGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp CCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATAGCTACTCATTAGGTCAAGGCTaGCCTCTCCCCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PSKLILISELSLGCNYSYSLGQG*PLPSRS
Trigger: TGACCTGGAGGGGAGAGGTCAGCCTTGACCTAATGA...GTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACCATTGGGAGCAAGGTaGATGTTAGGAAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PLGARCMLGKEGGPCPKAPLGAR*MLGKEG
Trigger: TCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGG...TGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR GCA 90 bp AGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAACTGTCTGTCGATCTCTaGTTTGTAGCCTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SKVHVRKRRRAVPKGTKQLSVDL*FVACLL
Trigger: GAGCAGACAGGCTACAAAGCAGAGATCGACAGACAG...TTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp ATCCAGCCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATAGCAAGGGAAGAGCTTaGTCCATCCTGGTCAGGACC +
Preference number: 4 (lower is better)
Translates to: IQPSKLILISELSLGCNYSKGRA*SILVRT
Trigger: GGTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCT...ATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCTGCTTCTAAATACCTaGGTAATTGTGTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HVHRGVWRQSCPWGKNTGLLLNT*VIVSLG
Trigger: ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAG...CCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGATGGCCCCCACGCACTaGGCGATGATGTACATGAGG +
Preference number: 4 (lower is better)
Translates to: EIPTPKRHICRADRCRALMAPTH*AMMYMR
Trigger: CCTCATGTACATCATCGCCCAGTGCGTGGGGGCCAT...CAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp GGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGACCCAGAAAATCCAGTaGTTGCTGAAGTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GSKVHVRKRRRAVPKGTKTQKIQ*LLKLCV
Trigger: CACACACAACTTCAGCAACCACTGGATTTTCTGGGT...CTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR TCA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGCTTCAAGGGAGTGGGTaGATTGGTAAATCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWLQGSG*IGKSWS
Trigger: GGACCAAGATTTACCAATTCACCCACTCCCTTGAAG...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp AAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGAGGGAGTAGAGAACTaGAGAATGAGCAAGATAATG +
Preference number: 4 (lower is better)
Translates to: KLEMRGISLVVQGVARDREGVEN*RMSKIM
Trigger: CATTATCTTGCTCATTCTTCAGTTCTCTACTCCCTC...CCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp TCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATAGCTACCTCCTGATCAGGAGCTCATaGGCAAGGGAAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SKLILISELSLGCNYSYLLIRSS*AREELA
Trigger: AGCAAGCTCTTCCCTTGCTCATGAGCTCCTGATCAG...GAGGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp AATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTCTGCTTCTAAATACCTaGGTAATTGTGTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: NERNQPRGPGSSQRQGLGLLLNT*VIVSLG
Trigger: ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAG...ACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp TTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCACCCAGAAAATCCAGTaGTTGCTGAAGTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FGQLVRVSTVWISPLPSLTQKIQ*LLKLCV
Trigger: CACACACAACTTCAGCAACCACTGGATTTTCTGGGT...GAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp ACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCACCCAGAAAATCCAGTaGTTGCTGAAGTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TLASLSECLQYGFHPSPPTQKIQ*LLKLCV
Trigger: CACACACAACTTCAGCAACCACTGGATTTTCTGGGT...GGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCAGACCCCTTCTATTTaGGCTTCATCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHQTPSI*ASSPPW
Trigger: CCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTG...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp AGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGCTTCTACAGACCCCTTCTATTTaGGCTTCATCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: RCDALVIVKGLLVVPLLLQTPSI*ASSPPW
Trigger: CCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTG...TAGAAGCAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACAGGTCTGGCAGATCTTaGGGAAGTGACTTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHRSGRS*GSDFGQ
Trigger: CTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACCT...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp AACTATAGCTACCTCATTAGGTCAAGGCTGACCTCTCCCCTCCAGGTCAATGCACTAGACCACGTCTTCTaGACCCATGCTGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: NYSYLIRSRLTSPLQVNALDHVF*THAVFA
Trigger: TGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAG...TGCATTGACCTGGAGGGGAGAGGTCAGCCTTGACCTAATGAGGTAGCTATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TGCAGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGCTTTCTGTCCTCAGGCTTTaGGCTTCAGACAGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: CRCDALVIVKGLLVVPLLSVLRL*ASDSSS
Trigger: ACTTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGA...AAGCAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp AGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAATCTCTGAACTGTCCTTaGGCTGCAACTATAGCTACC +
Preference number: 4 (lower is better)
Translates to: SKVHVRKRRRAVPKGTKQSLNCP*AATIAT
Trigger: GGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGA...TTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp AATGAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCCTAAGTGCACAGTGGTaGAGCTGCTCTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: NEIPTPKRHICRADRCRALSAQW*SCSGPG
Trigger: ACCAGGGCCAGAGCAGCTCCACCACTGTGCACTTAG...GGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAACGTAATTGTGTCTCTTaGTTTCTGTTGCCATCATGG +
Preference number: 4 (lower is better)
Translates to: GCGQGSYSKPVQVIQLLKRNCVS*FLLPSW
Trigger: CCATGATGGCAACAGAAACCAAGAGACACAATTACG...TTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGCCAGAGACAGGGCCTTaGTTACTAGGCCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: EIPTPKRHICRADRCRALPETGP*LLGLAK
Trigger: TTTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGG...CAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR TCA 90 bp GAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCTTCAAGGGAGTGGGTaGATTGGTAAATCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: EVTLASLSECLQYGFHPSLQGSG*IGKSWS
Trigger: GGACCAAGATTTACCAATTCACCCACTCCCTTGAAG...GGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp CTCTCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTCTTCAAGGGAGTGGGTaGATTGGTAAATCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSIGNRKFQLPGCLSISALQGSG*IGKSWS
Trigger: GGACCAAGATTTACCAATTCACCCACTCCCTTGAAG...AGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAATTACGGCCATTGGGAGCAAGGTaGATGTTAGGAAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: VHVRKRRRAVPKGTKQLRPLGAR*MLGKEG
Trigger: TCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGG...CCGTAATTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTTTCTGTTGCCATCAGTGTGGCGACAGTCATaGCCCTGGGGAAAGAACACA +
Preference number: 4 (lower is better)
Translates to: PSASKYLRNCVSWFLLPSVWRQS*PWGKNT
Trigger: TGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACAC...TGATGGCAACAGAAACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGACCCAGAAAATCCAGTaGTTGCTGAAGTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWTQKIQ*LLKLCV
Trigger: CACACACAACTTCAGCAACCACTGGATTTTCTGGGT...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCACCCAGAAAATCCAGTaGTTGCTGAAGTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TPKRHICRADRCRALVCSTQKIQ*LLKLCV
Trigger: CACACACAACTTCAGCAACCACTGGATTTTCTGGGT...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp GAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGAGGTCTGGCAGATCTTaGGGAAGTGACTTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EIPTPKRHICRADRCRALRSGRS*GSDFGQ
Trigger: CTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACCT...CAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CCA 90 bp AGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAATGCCTCTGATAAAGTTCCAACTACCTaGCTGTCTGTCGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGHTASLCRLFSCSNASDKVPTT*LSVDLC
Trigger: GCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTT...ATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp AGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGCTTCTATCTGTCCTCAGGCTTTaGGCTTCAGACAGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: RCDALVIVKGLLVVPLLLSVLRL*ASDSSS
Trigger: ACTTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGA...TAGAAGCAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp AATGAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCCCAGAGACAGGGCCTTaGTTACTAGGCCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: NEIPTPKRHICRADRCRAPETGP*LLGLAK
Trigger: TTTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGG...GGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
3UTR CAA 72 bp CAGCCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTaGGGCTGCAACTATAGCTACCTCATTAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: QPSKLILISELS*GCNYSYLIRSR
Trigger: CCTTGACCTAATGAGGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR TCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCTTCAAGGGAGTGGGTaGATTGGTAAATCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHLQGSG*IGKSWS
Trigger: GGACCAAGATTTACCAATTCACCCACTCCCTTGAAG...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR TCA 90 bp AATGAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCAGGTCACTCAGGCCCTaGTATAGGGACGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: NEIPTPKRHICRADRCRARSLRP*YRDDSK
Trigger: CTTGGAATCGTCCCTATATCAGGGCCTGAGTGACCT...GGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp ATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACACTGCTTCTAAATACCTaGGTAATTGTGTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: IGSKVHVRKRRRAVPKGTLLLNT*VIVSLG
Trigger: ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAG...TGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp ATTGAAAGGACTTATGTAGATAGAATCCAGCCTTCAAAGCTGATCCTGATCTCTTGCAGGGCCTTGGTGTaGAGCAGCCTAGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: IERTYVDRIQPSKLILISCRALV*SSLEPG
Trigger: GCCTGGTTCTAGGCTGCTGCACACCAAGGCCCTGCA...AGAGATCAGGATCAGCTTTGAAGGCTGGATTCTATCTACATAAGTCCTTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACGAACATTCCACCCCATaGCCGACTGCATCTAAATTC +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHEHSTP*PTASKF
Trigger: GAATTTAGATGCAGTCGGGCATGGGGTGGAATGTTC...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CCA 90 bp CAGTTTCTTTATCTGTTAAATGAGCTAGAAGTTCCTGCTAGGGAATGGAGAAGATCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCA +
Preference number: 4 (lower is better)
Translates to: QFLYLLNELEVPAREWRRSMPRP*PEFTPS
Trigger: TGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGA...TCTTCTCCATTCCCTAGCAGGAACTTCTAGCTCATTTAACAGATAAAGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACAAAGTTCCAACTACCTaGCTGTCTGTCGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LGEVTLASLSECLQYGFHKVPTT*LSVDLC
Trigger: GCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTT...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CCA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCCCTTCACCCTCTAAATaGCTTCATTCTGCAATAGCA +
Preference number: 4 (lower is better)
Translates to: TPKRHICRADRCRALVCSPSPSK*LHSAIA
Trigger: TGCTATTGCAGAATGAAGCCATTTAGAGGGTGAAGG...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp ATTGAAAGGACTTATGTAGATAGAATCCAGCCTTCAAAGCTGATCCTGATCTCTGGGCATCTGCCTCCATaGGCTGACCTGCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: IERTYVDRIQPSKLILISGHLPP*ADLHQG
Trigger: ACCCTGATGCAGGTCAGCCCATGGAGGCAGATGCCC...AGAGATCAGGATCAGCTTTGAAGGCTGGATTCTATCTACATAAGTCCTTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCATTCAGACAGCTCAAGTaGTCTTTGATAAACATACAC +
Preference number: 4 (lower is better)
Translates to: HICRADRCRALVCSSLEPFRQLK*SLINIH
Trigger: GTGTATGTTTATCAAAGAGCACTTGAGCTGTCTGAA...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CAGTTTCTTTATCTGTTAAATGAGCTAGAAGTTCCTGCTAGGGAATGGAGAAGAATGGCCCCCACGCACTaGGCGATGATGTACATGAGG +
Preference number: 4 (lower is better)
Translates to: QFLYLLNELEVPAREWRRMAPTH*AMMYMR
Trigger: CCTCATGTACATCATCGCCCAGTGCGTGGGGGCCAT...TCTTCTCCATTCCCTAGCAGGAACTTCTAGCTCATTTAACAGATAAAGAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CCA 90 bp GAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGTCTCTGAACTGTCCTTaGGCTGCAACTATAGCTACC +
Preference number: 4 (lower is better)
Translates to: EIPTPKRHICRADRCRALSLNCP*AATIAT
Trigger: GGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGA...CAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp TGCAGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGCTTCGTAATTGTGTCTCTTaGTTTCTGTTGCCATCATGG +
Preference number: 4 (lower is better)
Translates to: CRCDALVIVKGLLVVPLLRNCVS*FLLPSW
Trigger: CCATGATGGCAACAGAAACCAAGAGACACAATTACG...AAGCAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
3UTR CAA 72 bp CCTCAGGCTTTGGGCTTCAGACAGCTCAAGTGCTCTTaGATAAACATACACCAGCATAATGGTGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: PQALGFRQLKCS*INIHQHNGDLC
Trigger: ACACAGGTCACCATTATGCTGGTGTATGTTTATCAAAGAGCACTTGAGCTGTCTGAAGCCCAAAGCCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp GAAATTCCAACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGCCATTGGGAGCAAGGTaGATGTTAGGAAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: EIPTPKRHICRADRCRALPLGAR*MLGKEG
Trigger: TCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGG...CAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGTTGGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp ATTGAAAGGACTTATGTAGATAGAATCCAGCCTTCAAAGCTGATCCTGATCTCTAGCAAGGGAAGAGCTTaGTCCATCCTGGTCAGGACC +
Preference number: 4 (lower is better)
Translates to: IERTYVDRIQPSKLILISSKGRA*SILVRT
Trigger: GGTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCT...AGAGATCAGGATCAGCTTTGAAGGCTGGATTCTATCTACATAAGTCCTTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp CAGTTTCTTTATCTGTTAAATGAGCTAGAAGTTCCTGCTAGGGAATGGAGAAGAAAAGAAGGAGGGCCGTaGCCAAAGGCACAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: QFLYLLNELEVPAREWRRKEGGP*PKAQSN
Trigger: ATTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTT...TCTTCTCCATTCCCTAGCAGGAACTTCTAGCTCATTTAACAGATAAAGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR GCA 90 bp TCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATAGCTACCTCTTCAGACAGCTCAAGTaGTCTTTGATAAACATACAC +
Preference number: 4 (lower is better)
Translates to: SKLILISELSLGCNYSYLFRQLK*SLINIH
Trigger: GTGTATGTTTATCAAAGAGCACTTGAGCTGTCTGAA...GAGGTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CCA 90 bp CAGTTTCTTTATCTGTTAAATGAGCTAGAAGTTCCTGCTAGGGAATGGAGAAGACGTAATTGTGTCTCTTaGTTTCTGTTGCCATCATGG +
Preference number: 4 (lower is better)
Translates to: QFLYLLNELEVPAREWRRRNCVS*FLLPSW
Trigger: CCATGATGGCAACAGAAACCAAGAGACACAATTACG...TCTTCTCCATTCCCTAGCAGGAACTTCTAGCTCATTTAACAGATAAAGAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS CCA 90 bp AGCAGCCCCAGTGTGACAGCCGGGTTGAGGTGGGCGCCGCTGATGTaGCCCACACTCTGCGCCAGCGTGGCGATGCTCAGCCCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SSPSVTAGLRWAPLM*PTLCASVAMLSPKA
Trigger: GGCCTTCGGGCTGAGCATCGCCACGCTGGCGCAGAGTGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGTCACACTGGGGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000441328.7
ENST00000652696.1
CDS CCA 90 bp TCACGGCGCCTCCGGTCGGTAGTAGCCAGCACGCATAGCACCAGCTaGAGGGTCCCGATGATCTCGATGCCCAGGCCCTGGCCCGAGTTC +
Preference number: 5 (lower is better)
Translates to: SRRLRSVVASTHSTS*RVPMISMPRPWPEF
Trigger: GAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGTGCTGGCTACTACCGACCGGAGGCGCCGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000652692.1
ENST00000652696.1
CDS TCA 90 bp GTCATTGCGGCCAAGCGAGTTCCCAGTCAGGGAGGAGGTGATGCCTaGGAGGATGGCGGTGGCGACGATGGCCCCCACGCACTGGGCGAT +
Preference number: 5 (lower is better)
Translates to: VIAAKRVPSQGGGDA*EDGGGDDGPHALGD
Trigger: ATCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCAGGCATCACCTCCTCCCTGACTGGGAACTCGCTTGGCCGCAATGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS TCA 90 bp CAGCCAGGTCATTGCGGCCAAGCGAGTTCCCAGTCAGGGAGGAGGTaGTGCCTGAGAGGATGGCGGTGGCGACGATGGCCCCCACGCACT +
Preference number: 5 (lower is better)
Translates to: QPGHCGQASSQSGRR*CLRGWRWRRWPPRT
Trigger: AGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCAGGCATCACCTCCTCCCTGACTGGGAACTCGCTTGGCCGCAATGACCTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS CCA 90 bp CATAGCACCAGCTGGAGGGTCCCGATGATCTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCAGCCAGCTGCCTAGACCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: HSTSWRVPMISMPRP*PEFTPSASCLDPGP
Trigger: GGGGCCTGGGTCTAGGCAGCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409611.1
CDS TCA 90 bp TGGCCAGGAACTCGGCCACCACTGCCCTCCAGAAGAGCTTCTTCTTaGACTCGCTGGCCATGCTGGCAGGGGGCTTGGCCTGAGACCGCT +
Preference number: 5 (lower is better)
Translates to: WPGTRPPLPSRRASS*TRWPCWQGAWPETA
Trigger: AGCGGTCTCAGGCCAAGCCCCCTGCCAGCATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 90 bp GTGGCGATGCTCAGCCCGAAGGCCAGCGACACCTTCACGTTGTCCTaGACCGCCGTCTGGTTGTTCCCCACCGGGTATTTGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VAMLSPKASDTFTLS*TAVWLFPTGYLKPR
Trigger: CCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCTGAGCATCGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 90 bp CATAGCACCAGCTGGAGGGTCCCGATGATCTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCAGCCAGGTCATTGCGGCCAAGCGAG +
Preference number: 5 (lower is better)
Translates to: HSTSWRVPMISMPRP*PEFTPSARSLRPSE
Trigger: CTCGCTTGGCCGCAATGACCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp CTGGCACACCTCCCATCATGCTCTGAGGGGCGACTAGCAGGTGGGTCCCTTTCTAGTGTGACAGCCGGGTaGAGGTGGGCGCCGCTGATG +
Preference number: 5 (lower is better)
Translates to: LAHLPSCSEGRLAGGSLSSVTAG*RWAPLM
Trigger: CATCAGCGGCGCCCACCTCAACCCGGCTGTCACACT...AGAAAGGGACCCACCTGCTAGTCGCCCCTCAGAGCATGATGGGAGGTGTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS GCA 90 bp TCGGTGAGGTCCTGGCTCCCTCCACCCCTCTTTCTCCTCTGTGCCTaGCTCCCTATTGTCTCCACCCTCTCTCTCTCCTTCTCCACCCCG +
Preference number: 5 (lower is better)
Translates to: SVRSWLPPPLFLLCA*LPIVSTLSLSFSTP
Trigger: CGGGGTGGAGAAGGAGAGAGAGAGGGTGGAGACAATAGGGAGGCAGGCACAGAGGAGAAAGAGGGGTGGAGGGAGCCAGGACCTCACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409899.5
CDS CCA 90 bp AGCCCGAAGGCCAGCGACACCTTCACGTTGTCCTGGACCGCCGTCTaGTTGTTCCCCACCGGGTATTTGAAGCCCAGGGCAGAACCGATG +
Preference number: 5 (lower is better)
Translates to: SPKASDTFTLSWTAV*LFPTGYLKPRAEPM
Trigger: CATCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 90 bp GTGATGCCTGAGAGGATGGCGGTGGCGACGATGGCCCCCACGCACTaGGCGATGATGTACATGAGGGCACGGAAGATGCTGATCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VMPERMAVATMAPTH*AMMYMRARKMLIWQ
Trigger: CTGCCAGATCAGCATCTTCCGTGCCCTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCAGGCATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS CCA 90 bp TCACCTCCTGAGAGGATGGCGGTGGCGACGATGGCCCCCACGCACTaGGCGATGATGTACATGAGGGCACGGAAGATGCTGATCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SPPERMAVATMAPTH*AMMYMRARKMLIWQ
Trigger: CTGCCAGATCAGCATCTTCCGTGCCCTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCAGGAGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441328.7
CDS-3UTR CAA 90 bp AGGCCTGTAGAGCTCTGCCGGTCCCTGCCACTTTGCAGAAGGAGGTCACTCAGGAGCGACACCTTCACGTaGTCCTGGACCGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RPVELCRSLPLCRRRSLRSDTFT*SWTAVW
Trigger: CCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCT...CCTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCGGCAGAGCTCTACAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS TCA 90 bp CCGGGCCAGACCCCTTCTATTTGGGCTTCATCTCCACCCTGGAGTTaGTGTCGTCGGCATCCAGGTCATACTCCTCCACCTGGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PGQTPSIWASSPPWS*CRRHPGHTPPPGRW
Trigger: CCAGCGGCCAGGTGGAGGAGTATGACCTGGATGCCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000652692.1
ENST00000652696.1
CDS GCA 90 bp GCCTTCGGTGAGGTCCTGGCTCCCTCCACCCCTCTTTCTCCTCTGTaGCTGCCTCCCTATTGTCTCCACCCTCTCTCTCTCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: AFGEVLAPSTPLSPL*LPPYCLHPLSLLLH
Trigger: GTGGAGAAGGAGAGAGAGAGGGTGGAGACAATAGGGAGGCAGGCACAGAGGAGAAAGAGGGGTGGAGGGAGCCAGGACCTCACCGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409899.5
CDS CCA 90 bp ACCCTGGAGTTGATGTCGTCGGCATCCAGGTCATACTCCTCCACCTaGCCGCTGGTCCACACCTTCACGCGGTCTGTGAGGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: TLELMSSASRSYSST*PLVHTFTRSVRSLL
Trigger: CAGCAGTGACCTCACAGACCGCGTGAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGACCTGGATGCCGACGACATCAACTCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000652692.1
ENST00000652696.1
CDS CCA 90 bp CTCCTGGAGTTGATGTCGTCGGCATCCAGGTCATACTCCTCCACCTaGCCGCTGGTCCACACCTTCACGCGGTCTGTGAGGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: LLELMSSASRSYSST*PLVHTFTRSVRSLL
Trigger: CAGCAGTGACCTCACAGACCGCGTGAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGACCTGGATGCCGACGACATCAACTCCAGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651610.1
CDS-3UTR CAA 90 bp CATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGAGCGACACCTTCACGTaGTCCTGGACCGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: HVHRGVWRQSCPWGKNTGSDTFT*SWTAVW
Trigger: CCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCT...CCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTTACTAGGCCTGGCCAACCATCAGCCAGGTCATaGCGGCCAAGCGAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: LVVQGVARDRALVTRPGQPSARS*RPSEFP
Trigger: TGGGAACTCGCTTGGCCGCAATGACCTGGCTGATGG...TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp CTGGCACACCTCCCATCATGCTCTGAGGGGCGACTAGCAGGTGGGTCCCTTTCTACCCCCATAAGAGGCTaGACCATGCAGGTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LAHLPSCSEGRLAGGSLSTPIRG*TMQVWQ
Trigger: CTGCCAGACCTGCATGGTCAAGCCTCTTATGGGGGT...AGAAAGGGACCCACCTGCTAGTCGCCCCTCAGAGCATGATGGGAGGTGTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp TTGCTCCATCCTGGTCAGGACCAGCTGAGGGCTTGGAAAACCCCCAGGCCCAGCCCCCTCCAAGCACCATaGGGAGCAAGGTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: LLHPGQDQLRAWKTPRPSPLQAP*GARCML
Trigger: TAACATGCACCTTGCTCCCAATGGTGCTTGGAGGGG...GCTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTCCTGACCAGGATGGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGGCCAGAGACAGGGCCTaGGTTACTAGGCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: ACGDSHAPGERTQGKWKEARDRA*VTRPGQ
Trigger: TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGC...CTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 90 bp CATAGCACCAGCTGGAGGGTCCCGATGATCTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCAGCCAGCCAAAAGTCCAGAACATTC +
Preference number: 5 (lower is better)
Translates to: HSTSWRVPMISMPRP*PEFTPSASQKSRTF
Trigger: GAATGTTCTGGACTTTTGGCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409899.5
CDS-3UTR CAA 90 bp AATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTCCATCAGCCAGGTCATaGCGGCCAAGCGAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: NERNQPRGPGSSQRQGLGPSARS*RPSEFP
Trigger: TGGGAACTCGCTTGGCCGCAATGACCTGGCTGATGG...ACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp ATCTGCCTCCATGGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCCATCAGCCAGGTCATaGCGGCCAAGCGAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: ICLHGLTCIRVFLSSGFGPSARS*RPSEFP
Trigger: TGGGAACTCGCTTGGCCGCAATGACCTGGCTGATGG...CCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCATGGAGGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGTTTGCACTTAGGGGCTGCGGACCCATGCTGTGTTaGCACTTAGGGGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: PGLDHVFWTHAVFALRGCGPMLC*HLGAAG
Trigger: GCCTGCAGCCCCTAAGTGCAAACACAGCATGGGTCC...GCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGGAGCAAGGGAAGAGCTaGCTCCATCCTGGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: ACGDSHAPGERTQGKWKEEQGKS*LHPGQD
Trigger: GTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCTC...CTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGTTTGCACTTAGGGGCTGCATCTCCACCCTGGAGTaGATGTCGTCGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: PGLDHVFWTHAVFALRGCISTLE*MSSASR
Trigger: CCTGGATGCCGACGACATCAACTCCAGGGTGGAGAT...GCAGCCCCTAAGTGCAAACACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GGAGCTCATGAGCAAGGGAAGAGCTTGCTCCATCCTGGTCAGGACCAGCTGAGGCCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTG +
Preference number: 5 (lower is better)
Translates to: GAHEQGKSLLHPGQDQLRPDPFY*GFISTL
Trigger: CAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGG...CCTCAGCTGGTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCTCATGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAACCGGTCCCTGCCACTTaGCAGAAGGAGGTCACTCAG +
Preference number: 5 (lower is better)
Translates to: GCGQGSYSKPVQVIQLLKPVPAT*QKEVTQ
Trigger: CTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCGG...TTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCGGACCAGCTGAGGGCTaGGAAAACCCCCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TPKRHICRADRCRALVCSGPAEG*ENPQAQ
Trigger: CTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTCC...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp TTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAATTCCCCACCGGGTATTaGAAGCCCAGGGCAGAACCG +
Preference number: 5 (lower is better)
Translates to: LGARCMLGKEGGPCPKAQFPTGY*KPRAEP
Trigger: CGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAA...TTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp AATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACAGGGCCTTGGTCAGTGGTTGCTGAAGTaGTGTGTGATCACCGCGGAG +
Preference number: 5 (lower is better)
Translates to: NERNQPRGPGSSQRQGLGQWLLK*CVITAE
Trigger: CTCCGCGGTGATCACACACAACTTCAGCAACCACTG...ACCAAGGCCCTGTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp TGTGGCGACAGTCATGCCCCTGGGGAAAGAACACAGGGCAAGTGGAAAGAGCAGCAGTGGTTGCTGAAGTaGTGTGTGATCACCGCGGAG +
Preference number: 5 (lower is better)
Translates to: CGDSHAPGERTQGKWKEQQWLLK*CVITAE
Trigger: CTCCGCGGTGATCACACACAACTTCAGCAACCACTG...CTGCTCTTTCCACTTGCCCTGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GGCTGTGGCCAGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAAATCTCCACCCTGGAGTaGATGTCGTCGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: GCGQGSYSKPVQVIQLLKISTLE*MSSASR
Trigger: CCTGGATGCCGACGACATCAACTCCAGGGTGGAGAT...TTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCTGGCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCAGAGCGGGTCAGGGGCTaGGGAGCAAGCAGAACTGAA +
Preference number: 5 (lower is better)
Translates to: HICRADRCRALVCSSLEPERVRG*GASRTE
Trigger: TTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCTC...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCTCAAGGACCCATGCTGTGTTaGCACTTAGGGGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LTCIRVFLSSGFGLQTAQGPMLC*HLGAAG
Trigger: GCCTGCAGCCCCTAAGTGCAAACACAGCATGGGTCC...TTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCAGCCAGAGACAGGGCCTaGGTTACTAGGCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: HICRADRCRALVCSSLEPARDRA*VTRPGQ
Trigger: TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGC...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp GGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGAGGAAGCTCCTGGAGTaGATGTCGTCGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: GSKVHVRKRRRAVPKGTKRKLLE*MSSASR
Trigger: CCTGGATGCCGACGACATCAACTCCAGGAGCTTCCT...CTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651610.1
CDS-3UTR CAA 90 bp GCAAGTGGAAAGAGCAGCCCTGGTCTAGACCACGTCTTCTGGACCCATGCTGTGCAGAAGAGCTTCTTCTaGAACTCGCTGGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: ASGKSSPGLDHVFWTHAVQKSFF*NSLAML
Trigger: CAGCATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTG...CACAGCATGGGTCCAGAAGACGTGGTCTAGACCAGGGCTGCTCTTTCCACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACAGTGTGACAGCCGGGTaGAGGTGGGCGCCGCTGATG +
Preference number: 5 (lower is better)
Translates to: LGEVTLASLSECLQYGFHSVTAG*RWAPLM
Trigger: CATCAGCGGCGCCCACCTCAACCCGGCTGTCACACT...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CAA 90 bp GGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAGTGGTTGCTGAAGTaGTGTGTGATCACCGCGGAG +
Preference number: 5 (lower is better)
Translates to: GSKVHVRKRRRAVPKGTKQWLLK*CVITAE
Trigger: CTCCGCGGTGATCACACACAACTTCAGCAACCACTG...CTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR CAA 90 bp ACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCATCTCCACCCTGGAGTaGATGTCGTCGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: TLASLSECLQYGFHPSPPISTLE*MSSASR
Trigger: CCTGGATGCCGACGACATCAACTCCAGGGTGGAGAT...GGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp TTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCCCCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTG +
Preference number: 5 (lower is better)
Translates to: LASLSECLQYGFHPSPPSPDPFY*GFISTL
Trigger: CAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGG...GGAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp GAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCAGAGACCCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTG +
Preference number: 5 (lower is better)
Translates to: EKLEMRGISLVVQGVARDPDPFY*GFISTL
Trigger: CAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGG...GTCTCTGGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCAACCCCCATAAGAGGCTaGACCATGCAGGTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: HICRADRCRALVCSSLEPTPIRG*TMQVWQ
Trigger: CTGCCAGACCTGCATGGTCAAGCCTCTTATGGGGGT...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CAA 90 bp CCCCCTCCAAGCACCATTGGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCTTCTGTCCTCAGGCTTaGGGCTTCAGACAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: PPPSTIGSKVHVRKRRRAFCPQA*GFRQLK
Trigger: CTTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAA...GGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCCAATGGTGCTTGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGACCCCGTCTCTTTCCTaGGTCCAAGGCCTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWTPSLS*VQGLSP
Trigger: GGGAGACAGGCCTTGGACCAAGGAAAGAGACGGGGT...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409899.5
CDS-3UTR CAA 90 bp ACACATGTACACAGAGGCGTGTGGCGACAGTCATGCCCCTGGGGAAAGAACACACAGAAGAGCTTCTTCTaGAACTCGCTGGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: THVHRGVWRQSCPWGKNTQKSFF*NSLAML
Trigger: CAGCATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTG...TGTGTTCTTTCCCCAGGGGCATGACTGTCGCCACACGCCTCTGTGTACATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCAGTGGTTGCTGAAGTaGTGTGTGATCACCGCGGAG +
Preference number: 5 (lower is better)
Translates to: DFGQLVRVSTVWISPLPSQWLLK*CVITAE
Trigger: CTCCGCGGTGATCACACACAACTTCAGCAACCACTG...GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp ACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCCAGTGGTTGCTGAAGTaGTGTGTGATCACCGCGGAG +
Preference number: 5 (lower is better)
Translates to: TLASLSECLQYGFHPSPPQWLLK*CVITAE
Trigger: CTCCGCGGTGATCACACACAACTTCAGCAACCACTG...GGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp GGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATCTCCACCCTGGAGTaGATGTCGTCGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: GRSWGSDFGQLVRVSTVWISTLE*MSSASR
Trigger: CCTGGATGCCGACGACATCAACTCCAGGGTGGAGAT...CCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp CATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCAGCCTAGAACCACCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTG +
Preference number: 5 (lower is better)
Translates to: HICRADRCRALVCSSLEPPDPFY*GFISTL
Trigger: CAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGG...TGGTTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp TGCAGGTCTGGCAGATCTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTCCCCTCCAAGCACCATaGGGAGCAAGGTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: CRSGRSWGSDFGQLVRVSPLQAP*GARCML
Trigger: TAACATGCACCTTGCTCCCAATGGTGCTTGGAGGGG...AGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAGATCTGCCAGACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CAA 90 bp AGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAATGCCTCTGATCCGGTCCCTGCCACTTaGCAGAAGGAGGTCACTCAG +
Preference number: 5 (lower is better)
Translates to: RGHTASLCRLFSCSNASDPVPAT*QKEVTQ
Trigger: CTGAGTGACCTCCTTCTGCAAAGTGGCAGGGACCGG...ATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCGCCAGAGACAGGGCCTaGGTTACTAGGCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: EVTLASLSECLQYGFHPSARDRA*VTRPGQ
Trigger: TTGGCCAGGCCTAGTAACCAAGGCCCTGTCTCTGGC...GGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CAA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCGACAGATGCAGGGCCTaGGTGTGCAGCAGCCTAGAA +
Preference number: 5 (lower is better)
Translates to: TPKRHICRADRCRALVCSDRCRA*VCSSLE
Trigger: TTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTC...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp GTGTGCAGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGGACAGATGCAGGGCCTaGGTGTGCAGCAGCCTAGAA +
Preference number: 5 (lower is better)
Translates to: VCRCDALVIVKGLLVVPLDRCRA*VCSSLE
Trigger: TTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTC...CAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCTGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp AGATGTGATGCACTGGTGATAGTTAAGGGCCTTCTGGTTGTCCCTCTGCTTCTATTCCCCACCGGGTATTaGAAGCCCAGGGCAGAACCG +
Preference number: 5 (lower is better)
Translates to: RCDALVIVKGLLVVPLLLFPTGY*KPRAEP
Trigger: CGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAA...TAGAAGCAGAGGGACAACCAGAAGGCCCTTAACTATCACCAGTGCATCACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTTGGACCGCCGTCTGGTaGTTCCCCACCGGGTATTTG +
Preference number: 5 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGWTAVW*FPTGYL
Trigger: CAAATACCCGGTGGGGAACAACCAGACGGCGGTCCA...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp ACTCCAAAGAGACATATATGCAGAGCAGACAGATGCAGGGCCTTGGTGTGCAGCCAGTGGTTGCTGAAGTaGTGTGTGATCACCGCGGAG +
Preference number: 5 (lower is better)
Translates to: TPKRHICRADRCRALVCSQWLLK*CVITAE
Trigger: CTCCGCGGTGATCACACACAACTTCAGCAACCACTG...GCTGCACACCAAGGCCCTGCATCTGTCTGCTCTGCATATATGTCTCTTTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCACCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTG +
Preference number: 5 (lower is better)
Translates to: FKGVGELVNLGPQEALRPPDPFY*GFISTL
Trigger: CAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGG...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp TGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCCGGTGACTTTGGCCAGCTaGTCAGAGTGTCTACAGTAT +
Preference number: 5 (lower is better)
Translates to: WPACQSVYSMDFTPPLPPVTLAS*SECLQY
Trigger: ATACTGTAGACACTCTGACAAGCTGGCCAAAGTCAC...CGGAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp TTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCCTTGGGGAAGTGACTTaGGCCAGCTTGTCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: FGQLVRVSTVWISPLPSLLGEVT*ASLSEC
Trigger: ACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG...GAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp ATCCAGCCTTCAAAGCTGATCCTGATCTCTGAACTGTCCTTGGGCTGCAACTATGAGCGGGTCAGGGGCTaGGGAGCAAGCAGAACTGAA +
Preference number: 5 (lower is better)
Translates to: IQPSKLILISELSLGCNYERVRG*GASRTE
Trigger: TTCAGTTCTGCTTGCTCCCAAGCCCCTGACCCGCTC...ATAGTTGCAGCCCAAGGACAGTTCAGAGATCAGGATCAGCTTTGAAGGCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CTCTCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTGAGCAAGGGAAGAGCTaGCTCCATCCTGGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LSIGNRKFQLPGCLSISAEQGKS*LHPGQD
Trigger: GTCCTGACCAGGATGGAGCAAGCTCTTCCCTTGCTC...AGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GGCCTTCTGGTTGTCCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTATCTCCACCCTGGAGTaGATGTCGTCGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: GLLVVPLLLNTCVIVSLGISTLE*MSSASR
Trigger: CCTGGATGCCGACGACATCAACTCCAGGGTGGAGAT...ACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGGACAACCAGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCACTTGGGGAAGTGACTTaGGCCAGCTTGTCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: FKGVGELVNLGPQEALRPLGEVT*ASLSEC
Trigger: ACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACACCCCCATAAGAGGCTaGACCATGCAGGTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LGEVTLASLSECLQYGFHTPIRG*TMQVWQ
Trigger: CTGCCAGACCTGCATGGTCAAGCCTCTTATGGGGGT...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp GACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCAAGGGAGTGGGTGAATaGGTAAATCTTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: DFGQLVRVSTVWISPLPSKGVGE*VNLGPQ
Trigger: CTGGGGACCAAGATTTACCAATTCACCCACTCCCTT...GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp TTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCCTCCCAGAAAATCCAGTGGTaGCTGAAGTTGTGTGTGATC +
Preference number: 5 (lower is better)
Translates to: LASLSECLQYGFHPSPPSQKIQW*LKLCVI
Trigger: GATCACACACAACTTCAGCAACCACTGGATTTTCTG...GGAGGGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp GGGAGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAGAAAATCCAGTGGTaGCTGAAGTTGTGTGTGATC +
Preference number: 5 (lower is better)
Translates to: GSKVHVRKRRRAVPKGTKQKIQW*LKLCVI
Trigger: GATCACACACAACTTCAGCAACCACTGGATTTTCTG...CTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR CAA 90 bp GACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCCCTCCGTGACTTTGGCCAGCTaGTCAGAGTGTCTACAGTAT +
Preference number: 5 (lower is better)
Translates to: DFGQLVRVSTVWISPLPSVTLAS*SECLQY
Trigger: ATACTGTAGACACTCTGACAAGCTGGCCAAAGTCAC...GGAGGGGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCAAAGGGAGTGGGTGAATaGGTAAATCTTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: FKGVGELVNLGPQEALRPKGVGE*VNLGPQ
Trigger: CTGGGGACCAAGATTTACCAATTCACCCACTCCCTT...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp AGCAAGGTGCATGTTAGGAAAAGAAGGAGGGCCGTGCCCAAAGGCACAAAGCAAAAGGGAGTGGGTGAATaGGTAAATCTTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SKVHVRKRRRAVPKGTKQKGVGE*VNLGPQ
Trigger: CTGGGGACCAAGATTTACCAATTCACCCACTCCCTT...TTGCTTTGTGCCTTTGGGCACGGCCCTCCTTCTTTTCCTAACATGCACCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000651610.1
ENST00000652696.1
CDS-3UTR CAA 90 bp TGGGCTGACCTGCATCAGGGTCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCCAGCTCAAGTGCTCTTaGATAAACATACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: WADLHQGLSVLRLWASDSQLKCS*INIHQH
Trigger: ATGCTGGTGTATGTTTATCAAAGAGCACTTGAGCTG...GCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGACCCTGATGCAGGTCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp GAAACTGAGAAGCTGGAAATGAGAGGAATCAGCCTCGTGGTCCAGGGAGTAGCCCAGAAAATCCAGTGGTaGCTGAAGTTGTGTGTGATC +
Preference number: 5 (lower is better)
Translates to: ETEKLEMRGISLVVQGVAQKIQW*LKLCVI
Trigger: GATCACACACAACTTCAGCAACCACTGGATTTTCTG...GGCTACTCCCTGGACCACGAGGCTGATTCCTCTCATTTCCAGCTTCTCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCTTGGGGAAGTGACTTaGGCCAGCTTGTCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: LGEVTLASLSECLQYGFHLGEVT*ASLSEC
Trigger: ACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp GAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACCCCTCCAAGGGAGTGGGTGAATaGGTAAATCTTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: EVTLASLSECLQYGFHPSKGVGE*VNLGPQ
Trigger: CTGGGGACCAAGATTTACCAATTCACCCACTCCCTT...GGAGGGGTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp ATTGAAAGGACTTATGTAGATAGAATCCAGCCTTCAAAGCTGATCCTGATCTCTGGACCAGCTGAGGGCTaGGAAAACCCCCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: IERTYVDRIQPSKLILISGPAEG*ENPQAQ
Trigger: CTGGGCCTGGGGGTTTTCCAAGCCCTCAGCTGGTCC...AGAGATCAGGATCAGCTTTGAAGGCTGGATTCTATCTACATAAGTCCTTTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTTTCTGTTGCCATCAGACAGATGCAGGGCCTaGGTGTGCAGCAGCCTAGAA +
Preference number: 5 (lower is better)
Translates to: PSASKYLRNCVSWFLLPSDRCRA*VCSSLE
Trigger: TTCTAGGCTGCTGCACACCAAGGCCCTGCATCTGTC...TGATGGCAACAGAAACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS-3UTR CAA 90 bp TTCAAGGGAGTGGGTGAATTGGTAAATCTTGGTCCCCAGGAAGCTCTGAGGCCACAGAAAATCCAGTGGTaGCTGAAGTTGTGTGTGATC +
Preference number: 5 (lower is better)
Translates to: FKGVGELVNLGPQEALRPQKIQW*LKLCVI
Trigger: GATCACACACAACTTCAGCAACCACTGGATTTTCTG...TGGCCTCAGAGCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
CDS-3UTR CAA 90 bp AGGGGTCATACAGCAAGCCTGTGCAGGTTATTCAGCTGCTCAAATGCCTCTGATATCTCTGAACTGTCCTaGGGCTGCAACTATAGCTAC +
Preference number: 5 (lower is better)
Translates to: RGHTASLCRLFSCSNASDISELS*GCNYSY
Trigger: GTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGAT...ATCAGAGGCATTTGAGCAGCTGAATAACCTGCACAGGCTTGCTGTATGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CTCTCCATAGGGAACAGAAAGTTCCAACTACCTGGCTGTCTGTCGATCTCTGCTCAGAAAATCCAGTGGTaGCTGAAGTTGTGTGTGATC +
Preference number: 5 (lower is better)
Translates to: LSIGNRKFQLPGCLSISAQKIQW*LKLCVI
Trigger: GATCACACACAACTTCAGCAACCACTGGATTTTCTG...AGCAGAGATCGACAGACAGCCAGGTAGTTGGAACTTTCTGTTCCCTATGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp TCTTTCTGTCCTCAGGCTTTGGGCTTCAGACAGCTCAAGTGCTCTTTGATAAACAAGGGAGTGGGTGAATaGGTAAATCTTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SFCPQALGFRQLKCSLINKGVGE*VNLGPQ
Trigger: CTGGGGACCAAGATTTACCAATTCACCCACTCCCTT...GTTTATCAAAGAGCACTTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CCCTCTGCTTCTAAATACCTGCGTAATTGTGTCTCTTGGTTTCTGTTGCCATCATTCTGTCCTCAGGCTTaGGGCTTCAGACAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: PSASKYLRNCVSWFLLPSFCPQA*GFRQLK
Trigger: CTTGAGCTGTCTGAAGCCCAAAGCCTGAGGACAGAA...TGATGGCAACAGAAACCAAGAGACACAATTACGCAGGTATTTAGAAGCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CTTGGGGAAGTGACTTTGGCCAGCTTGTCAGAGTGTCTACAGTATGGATTTCACATCTCTGAACTGTCCTaGGGCTGCAACTATAGCTAC +
Preference number: 5 (lower is better)
Translates to: LGEVTLASLSECLQYGFHISELS*GCNYSY
Trigger: GTAGCTATAGTTGCAGCCCAAGGACAGTTCAGAGAT...GTGAAATCCATACTGTAGACACTCTGACAAGCTGGCCAAAGTCACTTCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311813.11
CDS-3UTR CAA 90 bp ATTGAAAGGACTTATGTAGATAGAATCCAGCCTTCAAAGCTGATCCTGATCTCTCAGAAAATCCAGTGGTaGCTGAAGTTGTGTGTGATC +
Preference number: 5 (lower is better)
Translates to: IERTYVDRIQPSKLILISQKIQW*LKLCVI
Trigger: GATCACACACAACTTCAGCAACCACTGGATTTTCTG...AGAGATCAGGATCAGCTTTGAAGGCTGGATTCTATCTACATAAGTCCTTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS-3UTR CAA 90 bp CAGTTTCTTTATCTGTTAAATGAGCTAGAAGTTCCTGCTAGGGAATGGAGAAGACAGCTCAAGTGCTCTTaGATAAACATACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: QFLYLLNELEVPAREWRRQLKCS*INIHQH
Trigger: ATGCTGGTGTATGTTTATCAAAGAGCACTTGAGCTG...TCTTCTCCATTCCCTAGCAGGAACTTCTAGCTCATTTAACAGATAAAGAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 72 bp AGTGTGACAGCCGGGTTGAGGTGGGCGCCGCTGATGTaGCCCACACTCTGCGCCAGCGTGGCGATGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SVTAGLRWAPLM*PTLCASVAMLS
Trigger: GCTGAGCATCGCCACGCTGGCGCAGAGTGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGTCACACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000441328.7
ENST00000652696.1
CDS CAA 72 bp GCGATGCTCAGCCCGAAGGCCAGCGACACCTTCACGTaGTCCTGGACCGCCGTCTGGTTGTTCCCCACCGGG +
Preference number: 6 (lower is better)
Translates to: AMLSPKASDTFT*SWTAVWLFPTG
Trigger: CCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCTGAGCATCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 72 bp CTCCGGTCGGTAGTAGCCAGCACGCATAGCACCAGCTaGAGGGTCCCGATGATCTCGATGCCCAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LRSVVASTHSTS*RVPMISMPRPW
Trigger: CCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGTGCTGGCTACTACCGACCGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000652692.1
ENST00000652696.1
CDS CCA 72 bp GAGAGGATGGCGGTGGCGACGATGGCCCCCACGCACTaGGCGATGATGTACATGAGGGCACGGAAGATGCTG +
Preference number: 6 (lower is better)
Translates to: ERMAVATMAPTH*AMMYMRARKML
Trigger: CAGCATCTTCCGTGCCCTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311813.11
ENST00000441328.7
ENST00000652692.1
ENST00000652696.1
CDS CCA 72 bp AGCTGGAGGGTCCCGATGATCTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCAGCCAGGTCATTGCGG +
Preference number: 6 (lower is better)
Translates to: SWRVPMISMPRP*PEFTPSARSLR
Trigger: CCGCAATGACCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311813.11
ENST00000652692.1
ENST00000652696.1
CDS CCA 72 bp AGCTGGAGGGTCCCGATGATCTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCAGCCAGCTGCCTAGAC +
Preference number: 6 (lower is better)
Translates to: SWRVPMISMPRP*PEFTPSASCLD
Trigger: GTCTAGGCAGCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409611.1
CDS CAA 90 bp GCCAGCGTGGCGATGCTCAGCCCGAAGGCCAGCGACACCTTCACGTaGTCCTGGACCGCCGTCTGGTTGTTCCCCACCGGGTATTTGAAG +
Preference number: 6 (lower is better)
Translates to: ASVAMLSPKASDTFT*SWTAVWLFPTGYLK
Trigger: CTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCTGAGCATCGCCACGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CAA 90 bp CCGAAGGCCAGCGACACCTTCACGTTGTCCTGGACCGCCGTCTGGTaGTTCCCCACCGGGTATTTGAAGCCCAGGGCAGAACCGATGCTG +
Preference number: 6 (lower is better)
Translates to: PKASDTFTLSWTAVW*FPTGYLKPRAEPML
Trigger: CAGCATCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CAA 90 bp GTGGAGCTGCTCTGGCCGTGGATGCCCGGGCCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTGGAGTTGATGTCGTCGGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: VELLWPWMPGPDPFY*GFISTLELMSSASR
Trigger: CCTGGATGCCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGGCCCGGGCATCCACGGCCAGAGCAGCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS TCA 72 bp ACTCGGCCACCACTGCCCTCCAGAAGAGCTTCTTCTTaGACTCGCTGGCCATGCTGGCAGGGGGCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: TRPPLPSRRASS*TRWPCWQGAWP
Trigger: AGGCCAAGCCCCCTGCCAGCATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 72 bp GCCAGCGACACCTTCACGTTGTCCTGGACCGCCGTCTaGTTGTTCCCCACCGGGTATTTGAAGCCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: ASDTFTLSWTAV*LFPTGYLKPRA
Trigger: TGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 72 bp CTCAGCCCGAAGGCCAGCGACACCTTCACGTTGTCCTaGACCGCCGTCTGGTTGTTCCCCACCGGGTATTTG +
Preference number: 6 (lower is better)
Translates to: LSPKASDTFTLS*TAVWLFPTGYL
Trigger: CAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CCA 72 bp AGCTGGAGGGTCCCGATGATCTCGATGCCCAGGCCCTaGCCCGAGTTCACACCATCAGCCAGCCAAAAGTCC +
Preference number: 6 (lower is better)
Translates to: SWRVPMISMPRP*PEFTPSASQKS
Trigger: GGACTTTTGGCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409899.5
CDS CAA 90 bp CCCGGGCCAGACCCCTTCTATTTGGGCTTCATCTCCACCCTGGAGTaGATGTCGTCGGCATCCAGGTCATACTCCTCCACCTGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: PGPDPFYLGFISTLE*MSSASRSYSSTWPL
Trigger: CAGCGGCCAGGTGGAGGAGTATGACCTGGATGCCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000652692.1
ENST00000652696.1
CDS CCA 72 bp TTGATGTCGTCGGCATCCAGGTCATACTCCTCCACCTaGCCGCTGGTCCACACCTTCACGCGGTCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: LMSSASRSYSST*PLVHTFTRSVR
Trigger: CCTCACAGACCGCGTGAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGACCTGGATGCCGACGACATCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000651610.1
ENST00000652692.1
ENST00000652696.1
CDS CAA 72 bp CCCCCTACGTGGATGCCCGGGCCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTGGAGTTGATGTCGTCG +
Preference number: 6 (lower is better)
Translates to: PPTWMPGPDPFY*GFISTLELMSS
Trigger: CGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGGCCCGGGCATCCACGTAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
CDS CAA 72 bp CTCTGGCCGTGGATGCCCGGGCCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTGGAGTTGATGTCGTCG +
Preference number: 6 (lower is better)
Translates to: LWPWMPGPDPFY*GFISTLELMSS
Trigger: CGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGGCCCGGGCATCCACGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652692.1
CDS CAA 90 bp TTGGTCCCCAGGAAGCTGTGGATGCCCGGGCCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTGGAGTTGATGTCGTCGGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: LVPRKLWMPGPDPFY*GFISTLELMSSASR
Trigger: CCTGGATGCCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGGCCCGGGCATCCACAGCTTCCTGGGGACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652696.1
CDS CAA 72 bp AGCGACACCTTCACGTTGTCCTGGACCGCCGTCTGGTaGTTCCCCACCGGGTATTTGAAGCCCAGGGCAGAA +
Preference number: 6 (lower is better)
Translates to: SDTFTLSWTAVW*FPTGYLKPRAE
Trigger: TTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAAGGTGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CAA 72 bp TCCTGGACCGCCGTCTGGTTGTTCCCCACCGGGTATTaGAAGCCCAGGGCAGAACCGATGCTGATGAAGACA +
Preference number: 6 (lower is better)
Translates to: SWTAVWLFPTGY*KPRAEPMLMKT
Trigger: TGTCTTCATCAGCATCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CAA 72 bp AGGAAGCTGTGGATGCCCGGGCCAGACCCCTTCTATTaGGGCTTCATCTCCACCCTGGAGTTGATGTCGTCG +
Preference number: 6 (lower is better)
Translates to: RKLWMPGPDPFY*GFISTLELMSS
Trigger: CGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTCTGGCCCGGGCATCCACAGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652696.1
CDS CAA 90 bp TTCACGTTGTCCTGGACCGCCGTCTGGTTGTTCCCCACCGGGTATTaGAAGCCCAGGGCAGAACCGATGCTGATGAAGACAAAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: FTLSWTAVWLFPTGY*KPRAEPMLMKTKRV
Trigger: GACCCTCTTTGTCTTCATCAGCATCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGACAACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311813.11
ENST00000652696.1
CDS CAA 72 bp AATGGCCCCACCCAGAAAATCCAGTGGTTGCTGAAGTaGTGTGTGATCACCGCGGAGCCAAAGGACCGAGCA +
Preference number: 6 (lower is better)
Translates to: NGPTQKIQWLLK*CVITAEPKDRA
Trigger: TGCTCGGTCCTTTGGCTCCGCGGTGATCACACACAACTTCAGCAACCACTGGATTTTCTGGGTGGGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000651610.1
ENST00000652692.1
ENST00000652696.1
CDS CAA 72 bp GACCCCTTCTATTTGGGCTTCATCTCCACCCTGGAGTaGATGTCGTCGGCATCCAGGTCATACTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: DPFYLGFISTLE*MSSASRSYSST
Trigger: GGTGGAGGAGTATGACCTGGATGCCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000652692.1
ENST00000652696.1
CDS TCA 72 bp ACCCCTTCTATTTGGGCTTCATCTCCACCCTGGAGTTaGTGTCGTCGGCATCCAGGTCATACTCCTCCACCT +
Preference number: 6 (lower is better)
Translates to: TPSIWASSPPWS*CRRHPGHTPPP
Trigger: AGGTGGAGGAGTATGACCTGGATGCCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311813.11
ENST00000409611.1
ENST00000409899.5
ENST00000482461.1
ENST00000652692.1
ENST00000652696.1