Pregenerated sensors for APTR (Homo sapiens)
Ensembl gene IDs: ENSG00000214293Ensembl transcript IDs: ENST00000398043.3, ENST00000416650.5, ENST00000430801.6, ENST00000440088.5, ENST00000447009.1, ENST00000654794.1, ENST00000659053.1, ENST00000663454.1, ENST00000663654.1, ENST00000664660.1, ENST00000665948.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGTACCTGGTGAAGCCGGGCACGCGAGTTCACGCCAGCGACAGTaGAAAGCCCTCCCCTCGCAGCGCGCTCCGCCACTAGCCGCACCC | + |
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Preference number: 5 (lower is better) Translates to: AVPGEAGHASSRQRQ*KALPSQRAPPLAAP Trigger: GGGTGCGGCTAGTGGCGGAGCGCGCTGCGAGGGGAGGGCTTTCCACTGTCGCTGGCGTGAACTCGCGTGCCCGGCTTCACCAGGTACTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416650.5 ENST00000430801.6 ENST00000663454.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS CCA 90 bp | TCTTCCCTGATACCCACCGGGCACGCGAGTTCACGCCAGCGACAGTaGAAAGCCCTCCCCTCGCAGCGCGCTCCGCCACTAGCCGCACCC | + |
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Preference number: 5 (lower is better) Translates to: SSLIPTGHASSRQRQ*KALPSQRAPPLAAP Trigger: GGGTGCGGCTAGTGGCGGAGCGCGCTGCGAGGGGAGGGCTTTCCACTGTCGCTGGCGTGAACTCGCGTGCCCGGTGGGTATCAGGGAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000398043.3 ENST00000440088.5 ENST00000447009.1 ENST00000654794.1 ENST00000659053.1 ENST00000665948.1 |
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| CDS CCA 90 bp | AGTCAGCTTAAGCCTTCCCAGCTTCCGGGGCTCAGCTGGCGCTGCTaGGGCAGGTGCTGCAGAGACTTGTGTTGCTGGGTGGAAGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: SQLKPSQLPGLSWRC*GRCCRDLCCWVEVA Trigger: CGCGACTTCCACCCAGCAACACAAGTCTCTGCAGCACCTGCCCCAGCAGCGCCAGCTGAGCCCCGGAAGCTGGGAAGGCTTAAGCTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS GCA 90 bp | GGGGCAGGTGCTGCAGAGACTTGTGTTGCTGGGTGGAAGTCGCGCTaGCTTCTGGAGAGGGCCACAGAGAAACTTTCCAGAATGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GAGAAETCVAGWKSR*LLERATEKLSRMGF Trigger: GAAGCCCATTCTGGAAAGTTTCTCTGTGGCCCTCTCCAGAAGGCAGCGCGACTTCCACCCAGCAACACAAGTCTCTGCAGCACCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS TCA 90 bp | AGCTCCCAGAACTCCCACATGTGGTGGGAGGGACCCGGTGGGAACTaGATCATGGGGACGCTTTCCCCATACTGTTCTCATGGTAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: SSQNSHMWWEGPGGN*IMGTLSPYCSHGSE Trigger: TTCACTACCATGAGAACAGTATGGGGAAAGCGTCCCCATGATTCAGTTCCCACCGGGTCCCTCCCACCACATGTGGGAGTTCTGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS TCA 90 bp | ACAGTTCCTGAGGCTACAAGTCCAAGATCAAGGTGTCAGCGGGACTaGTTCCTTCTGAGGGCTGTGAGGAGAATCTGTCCCAGGACCCTC | + |
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Preference number: 5 (lower is better) Translates to: TVPEATSPRSRCQRD*FLLRAVRRICPRTL Trigger: GAGGGTCCTGGGACAGATTCTCCTCACAGCCCTCAGAAGGAATCAGTCCCGCTGACACCTTGATCTTGGACTTGTAGCCTCAGGAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS CCA 90 bp | CAGGAAAAATGGAAGGGAAAGTGGTACAAGTTAAAACAGTCTTCGTaGCCGCAGAGACGATCGCTACCTCGGCCATGGCAGATCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: QEKWKGKWYKLKQSS*PQRRSLPRPWQIWG Trigger: CCCCCAGATCTGCCATGGCCGAGGTAGCGATCGTCTCTGCGGCCACGAAGACTGTTTTAACTTGTACCACTTTCCCTTCCATTTTTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000398043.3 ENST00000440088.5 ENST00000447009.1 ENST00000654794.1 ENST00000659053.1 ENST00000665948.1 |
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| CDS TCA 90 bp | CTGAGCATTCCCGAAATCCAGCTTGCTGAACGCGCAGATGCAGGGTaGGAGGCACCCCAGGAAAAATGGAAGGGAAAGTGGTACAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: LSIPEIQLAERADAG*EAPQEKWKGKWYKL Trigger: TAACTTGTACCACTTTCCCTTCCATTTTTCCTGGGGTGCCTCTCACCCTGCATCTGCGCGTTCAGCAAGCTGGATTTCGGGAATGCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000398043.3 ENST00000440088.5 ENST00000447009.1 ENST00000654794.1 ENST00000659053.1 ENST00000665948.1 |
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| CDS CCA 90 bp | AGAACTCCCACATGTGGTGGGAGGGACCCGGTGGGAACTGAATCATaGGGACGCTTTCCCCATACTGTTCTCATGGTAGTGAATAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: RTPTCGGRDPVGTES*GRFPHTVLMVVNKS Trigger: AGACTTATTCACTACCATGAGAACAGTATGGGGAAAGCGTCCCCATGATTCAGTTCCCACCGGGTCCCTCCCACCACATGTGGGAGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 90 bp | GCGCTAGGCTCTTTCTTCATCAGCATCTCTATGCATGCTGTCTCCTaGTACTGGAATGCCCTCATTCTCGTTGCTTCCTGTGAACACGTG | + |
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Preference number: 5 (lower is better) Translates to: ALGSFFISISMHAVS*YWNALILVASCEHV Trigger: CACGTGTTCACAGGAAGCAACGAGAATGAGGGCATTCCAGTAGCAGGAGACAGCATGCATAGAGATGCTGATGAAGAAAGAGCCTAGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398043.3 ENST00000416650.5 |
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| CDS GCA 90 bp | TTTCCCACGTGCGCTAGGCTCTTTCTTCATCAGCATCTCTATGCATaGTGTCTCCTGCTACTGGAATGCCCTCATTCTCGTTGCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FPTCARLFLHQHLYA*CLLLLECPHSRCFL Trigger: CAGGAAGCAACGAGAATGAGGGCATTCCAGTAGCAGGAGACAGCATGCATAGAGATGCTGATGAAGAAAGAGCCTAGCGCACGTGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS GCA 90 bp | GGAGCCTTCACTGACTGCCCTGGGCAGCATGAAGCATTTTGTCAGTaGCCCGTAGCACCGTGGTCATATCTTTATTATTGCAAATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GAFTDCPGQHEAFCQ*PVAPWSYLYYCKFL Trigger: CAGAAATTTGCAATAATAAAGATATGACCACGGTGCTACGGGGCACTGACAAAATGCTTCATGCTGCCCAGGGCAGTCAGTGAAGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398043.3 |
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| CDS CCA 90 bp | GGCTCTTTCTTCATCAGCATCTCTATGCATGCTGTCTCCTGCTACTaGAATGCCCTCATTCTCGTTGCTTCCTGTGAACACGTGGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: GSFFISISMHAVSCY*NALILVASCEHVVN Trigger: GTTTACCACGTGTTCACAGGAAGCAACGAGAATGAGGGCATTCCAGTAGCAGGAGACAGCATGCATAGAGATGCTGATGAAGAAAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398043.3 ENST00000416650.5 |
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| CDS CCA 90 bp | CCTCGCCTAGCTTCTGACAGTTTGCTGGCTACCTTCGGAGTTCCTTaGCTTGTAAAAGCATTACCCCAATGTCCGCCTTTACCTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: PRLASDSLLATFGVP*LVKALPQCPPLPSK Trigger: TTTTGAAGGTAAAGGCGGACATTGGGGTAATGCTTTTACAAGCCAAGGAACTCCGAAGGTAGCCAGCAAACTGTCAGAAGCTAGGCGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS TCA 90 bp | CTTTTCCAGGCCGACTTCTTGTATCCTCACATGGCAGAAAGGGAGTaGGCTAGCTCTATGGACTCTTCTTATATGGCACTAATCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: LFQADFLYPHMAERE*ASSMDSSYMALIPS Trigger: GGATGGGATTAGTGCCATATAAGAAGAGTCCATAGAGCTAGCTCACTCCCTTTCTGCCATGTGAGGATACAAGAAGTCGGCCTGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 90 bp | CATTTCCAGCATTCCAACCAGTCTGAACTTTTGCAGTTTCCCACGTaGGCTAGGCTCTTTCTTCATCAGCATCTCTATGCATGCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: HFQHSNQSELLQFPT*ARLFLHQHLYACCL Trigger: GAGACAGCATGCATAGAGATGCTGATGAAGAAAGAGCCTAGCGCACGTGGGAAACTGCAAAAGTTCAGACTGGTTGGAATGCTGGAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS GCA 90 bp | GCGCTAGGCTCTTTCTTCATCAGCATCTCTATGCATGCTGTCTCCTaGTACTGGAATGCCCTCATTCTCGTTGCTTCCTGTTTTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ALGSFFISISMHAVS*YWNALILVASCFEE Trigger: TTCTTCAAAACAGGAAGCAACGAGAATGAGGGCATTCCAGTAGCAGGAGACAGCATGCATAGAGATGCTGATGAAGAAAGAGCCTAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS TCA 90 bp | TCTTCTTATATGGCACTAATCCCATCCACGAGGGTTCCACTCTCATaGCCTATTACCTCCCAAAGACCCCATCTCCAAAACCCATCACAT | + |
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Preference number: 5 (lower is better) Translates to: SSYMALIPSTRVPLS*PITSQRPHLQNPSH Trigger: ATGTGATGGGTTTTGGAGATGGGGTCTTTGGGAGGTAATAGGTCATGAGAGTGGAACCCTCGTGGATGGGATTAGTGCCATATAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 90 bp | CCTGTCATTCACAACATTTCCAGCATTCCAACCAGTCTGAACTTTTaGAGTTTCCCACGTGCGCTAGGCTCTTTCTTCATCAGCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVIHNISSIPTSLNF*SFPRALGSFFISIS Trigger: AGAGATGCTGATGAAGAAAGAGCCTAGCGCACGTGGGAAACTGCAAAAGTTCAGACTGGTTGGAATGCTGGAAATGTTGTGAATGACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS CCA 90 bp | GGCTCTTTCTTCATCAGCATCTCTATGCATGCTGTCTCCTGCTACTaGAATGCCCTCATTCTCGTTGCTTCCTGTTTTGAAGAAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GSFFISISMHAVSCY*NALILVASCFEEKL Trigger: CAGCTTTTCTTCAAAACAGGAAGCAACGAGAATGAGGGCATTCCAGTAGCAGGAGACAGCATGCATAGAGATGCTGATGAAGAAAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS TCA 90 bp | GGGCTGAACTTCTGTGAATCCATGGGAACAAGAGCCAGTGGAATTTaGATCGTTCATGTTACTCTCCTTTTGTACCCACAGACTGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: GLNFCESMGTRASGI*IVHVTLLLYPQTGD Trigger: ATCACCAGTCTGTGGGTACAAAAGGAGAGTAACATGAACGATTCAAATTCCACTGGCTCTTGTTCCCATGGATTCACAGAAGTTCAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS TCA 90 bp | CACAAACTGGATAGTTTAAACAACAGACATTTGCCTCACAGTTCCTaGGGCTACAAGTCCAAGATCAAGGTGTCAGCGGGACTGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: HKLDSLNNRHLPHSS*GYKSKIKVSAGLIP Trigger: AGGAATCAGTCCCGCTGACACCTTGATCTTGGACTTGTAGCCTCAGGAACTGTGAGGCAAATGTCTGTTGTTTAAACTATCCAGTTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 90 bp | TTCATCTGTAGTCCCCAAGAACTGGAGAAGGTCCAGGGAAGGAGATaGATGGAGTGTAAATTGCATCAATTAGGGCAAGAGACTCAATCT | + |
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Preference number: 5 (lower is better) Translates to: FICSPQELEKVQGRR*MECKLHQLGQETQS Trigger: AGATTGAGTCTCTTGCCCTAATTGATGCAATTTACACTCCATGCATCTCCTTCCCTGGACCTTCTCCAGTTCTTGGGGACTACAGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS TCA 90 bp | CAGAATGGGCTTCCCAGAAGCAAATGTGAAGTTTTGAAATGGGGCTaGACTTCTGTGAATCCATGGGAACAAGAGCCAGTGGAATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: QNGLPRSKCEVLKWG*TSVNPWEQEPVEFE Trigger: TTCAAATTCCACTGGCTCTTGTTCCCATGGATTCACAGAAGTTCAGCCCCATTTCAAAACTTCACATTTGCTTCTGGGAAGCCCATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS CCA 90 bp | AGGTATTCTTCCCGTTTGTGTGTCTCTGTTCAAATTTTCTGTTCTTaGAAGGACATTAGTCATACTGGATTAGGGATTGGGGGCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: RYSSRLCVSVQIFCS*KDISHTGLGIGGPP Trigger: AGGTGGGCCCCCAATCCCTAATCCAGTATGACTAATGTCCTTCCAAGAACAGAAAATTTGAACAGAGACACACAAACGGGAAGAATACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 90 bp | GCATTTTGTCAGTGCCCCGTAGCACCGTGGTCATATCTTTATTATTaGAAATTTCTGTTTCCACATATAATGTCAGGTGGAACCGATAGC | + |
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Preference number: 5 (lower is better) Translates to: AFCQCPVAPWSYLYY*KFLFPHIMSGGTDS Trigger: GCTATCGGTTCCACCTGACATTATATGTGGAAACAGAAATTTGCAATAATAAAGATATGACCACGGTGCTACGGGGCACTGACAAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398043.3 |
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| CDS TCA 90 bp | AATTTGAATCGTTCATGTTACTCTCCTTTTGTACCCACAGACTGGTaGTACCTTGTCACCACATCGAATGATTTTGAACACTTCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: NLNRSCYSPFVPTDW*YLVTTSNDFEHFPS Trigger: TGATGGGAAGTGTTCAAAATCATTCGATGTGGTGACAAGGTATCACCAGTCTGTGGGTACAAAAGGAGAGTAACATGAACGATTCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440088.5 |
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| CDS CCA 72 bp | GGTGAAGCCGGGCACGCGAGTTCACGCCAGCGACAGTaGAAAGCCCTCCCCTCGCAGCGCGCTCCGCCACTA | + |
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Preference number: 6 (lower is better) Translates to: GEAGHASSRQRQ*KALPSQRAPPL Trigger: TAGTGGCGGAGCGCGCTGCGAGGGGAGGGCTTTCCACTGTCGCTGGCGTGAACTCGCGTGCCCGGCTTCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416650.5 ENST00000430801.6 ENST00000663454.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS CCA 72 bp | ATACCCACCGGGCACGCGAGTTCACGCCAGCGACAGTaGAAAGCCCTCCCCTCGCAGCGCGCTCCGCCACTA | + |
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Preference number: 6 (lower is better) Translates to: IPTGHASSRQRQ*KALPSQRAPPL Trigger: TAGTGGCGGAGCGCGCTGCGAGGGGAGGGCTTTCCACTGTCGCTGGCGTGAACTCGCGTGCCCGGTGGGTAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000398043.3 ENST00000440088.5 ENST00000447009.1 ENST00000654794.1 ENST00000659053.1 ENST00000665948.1 |
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| CDS GCA 72 bp | TGGCGCTGCTGGGGCAGGTGCTGCAGAGACTTGTGTTaGTGGGTGGAAGTCGCGCTGCCTTCTGGAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: WRCWGRCCRDLC*WVEVALPSGEG Trigger: GCCCTCTCCAGAAGGCAGCGCGACTTCCACCCAGCAACACAAGTCTCTGCAGCACCTGCCCCAGCAGCGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS CCA 72 bp | CGCTGCTGGGGCAGGTGCTGCAGAGACTTGTGTTGCTaGGTGGAAGTCGCGCTGCCTTCTGGAGAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RCWGRCCRDLCC*VEVALPSGEGH Trigger: GTGGCCCTCTCCAGAAGGCAGCGCGACTTCCACCCAGCAACACAAGTCTCTGCAGCACCTGCCCCAGCAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS CCA 72 bp | CTCCCAGAACTCCCACATGTGGTGGGAGGGACCCGGTaGGAACTGAATCATGGGGACGCTTTCCCCATACTG | + |
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Preference number: 6 (lower is better) Translates to: LPELPHVVGGTR*ELNHGDAFPIL Trigger: CAGTATGGGGAAAGCGTCCCCATGATTCAGTTCCCACCGGGTCCCTCCCACCACATGTGGGAGTTCTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS TCA 72 bp | CCCGAAATCCAGCTTGCTGAACGCGCAGATGCAGGGTaGGAGGCACCCCAGGAAAAATGGAAGGGAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PEIQLAERADAG*EAPQEKWKGKW Trigger: CCACTTTCCCTTCCATTTTTCCTGGGGTGCCTCTCACCCTGCATCTGCGCGTTCAGCAAGCTGGATTTCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000398043.3 ENST00000440088.5 ENST00000447009.1 ENST00000654794.1 ENST00000659053.1 ENST00000665948.1 |
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| CDS TCA 72 bp | TGCCGCCACCTAAGACATGCCTTTCACCTTCCGCCATaGTTGAGGCCTCTCCAGCCACATGGAACCGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: CRHLRHAFHLPP*LRPLQPHGTVS Trigger: ACTCACGGTTCCATGTGGCTGGAGAGGCCTCAATCATGGCGGAAGGTGAAAGGCATGTCTTAGGTGGCGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 72 bp | GCTGCAGAGACTTGTGTTGCTGGGTGGAAGTCGCGCTaGCTTCTGGAGAGGGCCACAGAGAAACTTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: AAETCVAGWKSR*LLERATEKLSR Trigger: TCTGGAAAGTTTCTCTGTGGCCCTCTCCAGAAGGCAGCGCGACTTCCACCCAGCAACACAAGTCTCTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS TCA 72 bp | AACTCCCACATGTGGTGGGAGGGACCCGGTGGGAACTaGATCATGGGGACGCTTTCCCCATACTGTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: NSHMWWEGPGGN*IMGTLSPYCSH Trigger: ATGAGAACAGTATGGGGAAAGCGTCCCCATGATTCAGTTCCCACCGGGTCCCTCCCACCACATGTGGGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS CCA 72 bp | AGACTTGTGTTGCTGGGTGGAAGTCGCGCTGCCTTCTaGAGAGGGCCACAGAGAAACTTTCCAGAATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RLVLLGGSRAAF*RGPQRNFPEWA Trigger: AGCCCATTCTGGAAAGTTTCTCTGTGGCCCTCTCCAGAAGGCAGCGCGACTTCCACCCAGCAACACAAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS CCA 72 bp | ACATGTGGTGGGAGGGACCCGGTGGGAACTGAATCATaGGGACGCTTTCCCCATACTGTTCTCATGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: TCGGRDPVGTES*GRFPHTVLMVV Trigger: CACTACCATGAGAACAGTATGGGGAAAGCGTCCCCATGATTCAGTTCCCACCGGGTCCCTCCCACCACATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS TCA 72 bp | GAGGCTACAAGTCCAAGATCAAGGTGTCAGCGGGACTaGTTCCTTCTGAGGGCTGTGAGGAGAATCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: EATSPRSRCQRD*FLLRAVRRICP Trigger: GGGACAGATTCTCCTCACAGCCCTCAGAAGGAATCAGTCCCGCTGACACCTTGATCTTGGACTTGTAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 72 bp | CTGCAAACTCCACCTCCCAGGTTTAAGCGATTCTCCTaGCTCACCCTCCCGAGTAGCTGGGATTACTTACAG | + |
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Preference number: 6 (lower is better) Translates to: LQTPPPRFKRFS*LTLPSSWDYLQ Trigger: CTGTAAGTAATCCCAGCTACTCGGGAGGGTGAGGCAGGAGAATCGCTTAAACCTGGGAGGTGGAGTTTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398043.3 ENST00000654794.1 ENST00000663654.1 |
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| CDS CCA 72 bp | TGGAAGGGAAAGTGGTACAAGTTAAAACAGTCTTCGTaGCCGCAGAGACGATCGCTACCTCGGCCATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: WKGKWYKLKQSS*PQRRSLPRPWQ Trigger: CTGCCATGGCCGAGGTAGCGATCGTCTCTGCGGCCACGAAGACTGTTTTAACTTGTACCACTTTCCCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000398043.3 ENST00000440088.5 ENST00000447009.1 ENST00000654794.1 ENST00000659053.1 ENST00000665948.1 |
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| CDS TCA 72 bp | CGTTCATGTTACTCTCCTTTTGTACCCACAGACTGGTaGTACCGGATCATGGTGGTGCCTGTGTGTAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RSCYSPFVPTDW*YRIMVVPVCSP Trigger: GGGACTACACACAGGCACCACCATGATCCGGTATCACCAGTCTGTGGGTACAAAAGGAGAGTAACATGAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000430801.6 ENST00000659053.1 |
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| CDS CCA 72 bp | GGGCTCTTTTCCAGGCCGACTTCTTGTATCCTCACATaGCAGAAAGGGAGTGAGCTAGCTCTATGGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: GLFSRPTSCILT*QKGSELALWTL Trigger: AAGAGTCCATAGAGCTAGCTCACTCCCTTTCTGCCATGTGAGGATACAAGAAGTCGGCCTGGAAAAGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS TCA 72 bp | ATGGCACTAATCCCATCCACGAGGGTTCCACTCTCATaGCCTATTACCTCCCAAAGACCCCATCTCCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: MALIPSTRVPLS*PITSQRPHLQN Trigger: GTTTTGGAGATGGGGTCTTTGGGAGGTAATAGGTCATGAGAGTGGAACCCTCGTGGATGGGATTAGTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS TCA 72 bp | AATGTCCAAGATCAGAGTGCCATTGTAGGGTTCTGGTaGGGGCTCTTTTCCAGGCCGACTTCTTGTATCCTC | + |
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Preference number: 6 (lower is better) Translates to: NVQDQSAIVGFW*GLFSRPTSCIL Trigger: GAGGATACAAGAAGTCGGCCTGGAAAAGAGCCCTCACCAGAACCCTACAATGGCACTCTGATCTTGGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 72 bp | TGCGCTAGGCTCTTTCTTCATCAGCATCTCTATGCATaGTGTCTCCTGCTACTGGAATGCCCTCATTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: CARLFLHQHLYA*CLLLLECPHSR Trigger: ACGAGAATGAGGGCATTCCAGTAGCAGGAGACAGCATGCATAGAGATGCTGATGAAGAAAGAGCCTAGCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS TCA 72 bp | CGTTCATGTTACTCTCCTTTTGTACCCACAGACTGGTaGTACCTCTGTTTTCTCGCCAGCCTCATCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSCYSPFVPTDW*YLCFLASLISC Trigger: ACAGGAGATGAGGCTGGCGAGAAAACAGAGGTATCACCAGTCTGTGGGTACAAAAGGAGAGTAACATGAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664660.1 |
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| CDS CCA 72 bp | TTCATCAGCATCTCTATGCATGCTGTCTCCTGCTACTaGAATGCCCTCATTCTCGTTGCTTCCTGTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: FISISMHAVSCY*NALILVASCEH Trigger: GTGTTCACAGGAAGCAACGAGAATGAGGGCATTCCAGTAGCAGGAGACAGCATGCATAGAGATGCTGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398043.3 ENST00000416650.5 |
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| CDS CCA 72 bp | GCTTCTGACAGTTTGCTGGCTACCTTCGGAGTTCCTTaGCTTGTAAAAGCATTACCCCAATGTCCGCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: ASDSLLATFGVP*LVKALPQCPPL Trigger: TAAAGGCGGACATTGGGGTAATGCTTTTACAAGCCAAGGAACTCCGAAGGTAGCCAGCAAACTGTCAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS CCA 72 bp | TCACCTTCCGCCATGATTGAGGCCTCTCCAGCCACATaGAACCGTGAGTCCATTAAACCTCTTTTTCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SPSAMIEASPAT*NRESIKPLFPY Trigger: ATAAGGAAAAAGAGGTTTAATGGACTCACGGTTCCATGTGGCTGGAGAGGCCTCAATCATGGCGGAAGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS TCA 72 bp | GCCGACTTCTTGTATCCTCACATGGCAGAAAGGGAGTaGGCTAGCTCTATGGACTCTTCTTATATGGCACTA | + |
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Preference number: 6 (lower is better) Translates to: ADFLYPHMAERE*ASSMDSSYMAL Trigger: TAGTGCCATATAAGAAGAGTCCATAGAGCTAGCTCACTCCCTTTCTGCCATGTGAGGATACAAGAAGTCGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 72 bp | CACTATGTTGCCCAGGTTGGGCTCAAGCAATTCTCTTaGTTCAGCTTACTGGGCAGTTGGGAATATAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HYVAQVGLKQFS*FSLLGSWEYKH Trigger: ATGCTTATATTCCCAACTGCCCAGTAAGCTGAAGCAAGAGAATTGCTTGAGCCCAACCTGGGCAACATAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398043.3 ENST00000447009.1 |
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| CDS GCA 72 bp | CACAACATTTCCAGCATTCCAACCAGTCTGAACTTTTaGAGTTTCCCACGTGCGCTAGGCTCTTTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: HNISSIPTSLNF*SFPRALGSFFI Trigger: GATGAAGAAAGAGCCTAGCGCACGTGGGAAACTGCAAAAGTTCAGACTGGTTGGAATGCTGGAAATGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS TCA 72 bp | CTTCCCAGAAGCAAATGTGAAGTTTTGAAATGGGGCTaGACTTCTGTGAATCCATGGGAACAAGAGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LPRSKCEVLKWG*TSVNPWEQEPV Trigger: CACTGGCTCTTGTTCCCATGGATTCACAGAAGTTCAGCCCCATTTCAAAACTTCACATTTGCTTCTGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS TCA 72 bp | GATAGTTTAAACAACAGACATTTGCCTCACAGTTCCTaGGGCTACAAGTCCAAGATCAAGGTGTCAGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: DSLNNRHLPHSS*GYKSKIKVSAG Trigger: TCCCGCTGACACCTTGATCTTGGACTTGTAGCCTCAGGAACTGTGAGGCAAATGTCTGTTGTTTAAACTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS CAA 72 bp | TCACAACATTTCCAGCATTCCAACCAGTCTGAACTTTaGCAGTTTCCCACGTGCGCTAGGCTCTTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SQHFQHSNQSEL*QFPTCARLFLH Trigger: ATGAAGAAAGAGCCTAGCGCACGTGGGAAACTGCAAAAGTTCAGACTGGTTGGAATGCTGGAAATGTTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS CAA 72 bp | GTTAACTCTCCACGAGGACAGGGATTTAGTTATCACTaGTCCCCAGAATGTAGACAGACACTCGTTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: VNSPRGQGFSYH*SPECRQTLVGT Trigger: TGTTCCAACGAGTGTCTGTCTACATTCTGGGGACAAGTGATAACTAAATCCCTGTCCTCGTGGAGAGTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS TCA 72 bp | GGCGTGAACTACTGCACCTGGCCTAAGGTCAATTCTTaGATACAGAGACTGAGTAAAGATAGGACGTTGATA | + |
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Preference number: 6 (lower is better) Translates to: GVNYCTWPKVNS*IQRLSKDRTLI Trigger: TATCAACGTCCTATCTTTACTCAGTCTCTGTATTCAAGAATTGACCTTAGGCCAGGTGCAGTAGTTCACGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS CAA 72 bp | GAGAAGGTCCAGGGAAGGAGATGCATGGAGTGTAAATaGCATCAATTAGGGCAAGAGACTCAATCTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: EKVQGRRCMECK*HQLGQETQSEI Trigger: GATTTCAGATTGAGTCTCTTGCCCTAATTGATGCAATTTACACTCCATGCATCTCCTTCCCTGGACCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS CAA 72 bp | TACCTCCCAAAGACCCCATCTCCAAAACCCATCACATaGGGAATTAGGTTTCAACATATGAACAGGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: YLPKTPSPKPIT*GIRFQHMNRKG Trigger: TCCCTTCCTGTTCATATGTTGAAACCTAATTCCCAATGTGATGGGTTTTGGAGATGGGGTCTTTGGGAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS TCA 72 bp | TTCTGTGAATCCATGGGAACAAGAGCCAGTGGAATTTaGATCGTTCATGTTACTCTCCTTTTGTACCCACAG | + |
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Preference number: 6 (lower is better) Translates to: FCESMGTRASGI*IVHVTLLLYPQ Trigger: CTGTGGGTACAAAAGGAGAGTAACATGAACGATTCAAATTCCACTGGCTCTTGTTCCCATGGATTCACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS TCA 72 bp | AGAAACTTTCCAGAATGGGCTTCCCAGAAGCAAATGTaGAGTTTTGAAATGGGGCTGAACTTCTGTGAATCC | + |
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Preference number: 6 (lower is better) Translates to: RNFPEWASQKQM*SFEMGLNFCES Trigger: GGATTCACAGAAGTTCAGCCCCATTTCAAAACTTCACATTTGCTTCTGGGAAGCCCATTCTGGAAAGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000430801.6 ENST00000440088.5 ENST00000659053.1 ENST00000663454.1 ENST00000664660.1 ENST00000665948.1 |
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| CDS TCA 72 bp | CGTTCATGTTACTCTCCTTTTGTACCCACAGACTGGTaGTACCTTGTCACCACATCGAATGATTTTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: RSCYSPFVPTDW*YLVTTSNDFEH Trigger: GTGTTCAAAATCATTCGATGTGGTGACAAGGTATCACCAGTCTGTGGGTACAAAAGGAGAGTAACATGAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440088.5 |
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| CDS TCA 72 bp | CTCATTCTCGTTGCTTCCTGTTTTGAAGAAAAGCTGTaGTACCGGCAACAGTGTTTAAGTATCACACGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LILVASCFEEKL*YRQQCLSITRV Trigger: TACCCGTGTGATACTTAAACACTGTTGCCGGTATCACAGCTTTTCTTCAAAACAGGAAGCAACGAGAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654794.1 ENST00000663654.1 ENST00000664660.1 |
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| CDS CAA 90 bp | TACACACATCTCATCAATCTCAAGAATAAAATCAAAGTCTTTGGCTaGACAGCCTTCCACAATCTGACCTCTGTTTTCTCGCCAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: YTHLINLKNKIKVFG*TAFHNLTSVFSPAS Trigger: TGAGGCTGGCGAGAAAACAGAGGTCAGATTGTGGAAGGCTGTCAAGCCAAAGACTTTGATTTTATTCTTGAGATTGATGAGATGTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 72 bp | TGTCAGGTGGAACCGATAGCTGGCTTACAAAAACAATaGAATTTCAGGTGGTTCTACTTAACATTCCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: CQVEPIAGLQKQ*NFRWFYLTFPR Trigger: TCTAGGGAATGTTAAGTAGAACCACCTGAAATTGCATTGTTTTTGTAAGCCAGCTATCGGTTCCACCTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398043.3 |
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| CDS CCA 72 bp | CAGCATGAAGCATTTTGTCAGTGCCCCGTAGCACCGTaGTCATATCTTTATTATTGCAAATTTCTGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QHEAFCQCPVAP*SYLYYCKFLFP Trigger: TGGAAACAGAAATTTGCAATAATAAAGATATGACCACGGTGCTACGGGGCACTGACAAAATGCTTCATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398043.3 |
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| CDS TCA 72 bp | AATTACCCAGTCTTGGGTATGTCTTTATCAGCAGCATaGGAACGAACTAATATACAAGGGCTGATCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: NYPVLGMSLSAA*ERTNIQGLISN Trigger: GTTTGAGATCAGCCCTTGTATATTAGTTCGTTCTCATGCTGCTGATAAAGACATACCCAAGACTGGGTAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654794.1 ENST00000663654.1 |
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| CDS GCA 72 bp | GAAGCAGTATGTTTTCTGAACCCTTACAGATTGTTTTaGACACTCCTGGATTACACACATCTCATCAATCTC | + |
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Preference number: 6 (lower is better) Translates to: EAVCFLNPYRLF*TLLDYTHLINL Trigger: GAGATTGATGAGATGTGTGTAATCCAGGAGTGTGCAAAACAATCTGTAAGGGTTCAGAAAACATACTGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 |
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| CDS CCA 72 bp | CCGATAGCTGGCTTACAAAAACAATGCAATTTCAGGTaGTTCTACTTAACATTCCCTAGACAACAAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PIAGLQKQCNFR*FYLTFPRQQVH Trigger: GTGAACTTGTTGTCTAGGGAATGTTAAGTAGAACCACCTGAAATTGCATTGTTTTTGTAAGCCAGCTATCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398043.3 |
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| CDS CCA 72 bp | CTGTTTCCACATATAATGTCAGGTGGAACCGATAGCTaGCTTACAAAAACAATGCAATTTCAGGTGGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LFPHIMSGGTDS*LTKTMQFQVVL Trigger: TAGAACCACCTGAAATTGCATTGTTTTTGTAAGCCAGCTATCGGTTCCACCTGACATTATATGTGGAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398043.3 |
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| CDS CAA 72 bp | CTCATCAATCTCAAGAATAAAATCAAAGTCTTTGGCTaGACAGCCTTCCACAATCTGACCTCTGTTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LINLKNKIKVFG*TAFHNLTSVFS Trigger: CGAGAAAACAGAGGTCAGATTGTGGAAGGCTGTCAAGCCAAAGACTTTGATTTTATTCTTGAGATTGATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 |
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| CDS CAA 72 bp | AGAAGCAGTATGTTTTCTGAACCCTTACAGATTGTTTaGCACACTCCTGGATTACACACATCTCATCAATCT | + |
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Preference number: 6 (lower is better) Translates to: RSSMFSEPLQIV*HTPGLHTSHQS Trigger: AGATTGATGAGATGTGTGTAATCCAGGAGTGTGCAAAACAATCTGTAAGGGTTCAGAAAACATACTGCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 |
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| CDS CAA 72 bp | TATATAGAAGCAGTATGTTTTCTGAACCCTTACAGATaGTTTTGCACACTCCTGGATTACACACATCTCATC | + |
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Preference number: 6 (lower is better) Translates to: YIEAVCFLNPYR*FCTLLDYTHLI Trigger: GATGAGATGTGTGTAATCCAGGAGTGTGCAAAACAATCTGTAAGGGTTCAGAAAACATACTGCTTCTATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000398043.3 ENST00000416650.5 ENST00000654794.1 ENST00000663654.1 |
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