RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APP (Homo sapiens)

Ensembl gene IDs: ENSG00000142192

Ensembl transcript IDs: ENST00000346798.8, ENST00000348990.9, ENST00000354192.7, ENST00000357903.7, ENST00000358918.7, ENST00000359726.7, ENST00000415997.1, ENST00000439274.6, ENST00000440126.7, ENST00000448850.5, ENST00000462267.1, ENST00000463070.1, ENST00000464867.1, ENST00000466453.1, ENST00000474136.5, ENST00000491395.5, ENST00000548570.1

Found 971 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAACGGGTTTGTTTCTTCCCACATTATTCTATAAATGGACACCGATaGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGCT +
Preference number: 1 (lower is better)
Translates to: KRVCFFPHYSINGHR*VVKQWFCCPTSEAA
Trigger: AGCAGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGTGGGAAGAAACAAACCCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR CCA 90 bp GTAAATCATAAAACGGGTTTGTTTCTTCCCACATTATTCTATAAATaGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTC +
Preference number: 1 (lower is better)
Translates to: VNHKTGLFLPTLFYK*TPMGSEAMVLLSNF
Trigger: GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGTGGGAAGAAACAAACCCGTTTTATGATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR-3UTR TCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTACTCCCACGTTCACATaGAGCATCCCCCATCGATTC +
Preference number: 2 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPTPTFT*SIPHRF
Trigger: GAATCGATGGGGGATGCTTCATGTGAACGTGGGAGT...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGTGATCAAGGCTCACTaGAGCCTCAGCCACCCCAGG +
Preference number: 2 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEVIKAH*SLSHPR
Trigger: CCTGGGGTGGCTGAGGCTGCAGTGAGCCTTGATCAC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
3UTR-3UTR GCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 2 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCATAAATGGACACCGATaGGTAGTGAAGCAATGGTTT +
Preference number: 2 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFINGHR*VVKQWF
Trigger: AAACCATTGCTTCACTACCCATCGGTGTCCATTTAT...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR TCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGACTCCCACGTTCACATaGAGCATCCCCCATCGATTC +
Preference number: 2 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLTPTFT*SIPHRF
Trigger: GAATCGATGGGGGATGCTTCATGTGAACGTGGGAGT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR TCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAACTCCCACGTTCACATaGAGCATCCCCCATCGATTC +
Preference number: 2 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKTPTFT*SIPHRF
Trigger: GAATCGATGGGGGATGCTTCATGTGAACGTGGGAGT...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAATGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 2 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTAGAATAATATACAACTaGCTAAGGGGCTATGTGATA +
Preference number: 2 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPRIIYN*LRGYVI
Trigger: TATCACATAGCCCCTTAGCCAGTTGTATATTATTCT...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGTAGAAATGTGGTCTTaGCATGTTTCCCATTCTGGT +
Preference number: 2 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEVEMWS*HVSHSG
Trigger: ACCAGAATGGGAAACATGGCAAGACCACATTTCTAC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
3UTR-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: EYITDVWINSSSGIYLCYVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: RGYVINNQERIYSCTSLIVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: GYVINNQERIYSCTSLIQVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 2 (lower is better)
Translates to: YITDVWINSSSGIYLCYSWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATAGCTTGAAGTCTCAATaGCTAATGTGTGCACATAAA +
Preference number: 2 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYSLKSQ*LMCAHK
Trigger: TTTATGTGCACACATTAGGCATTGAGACTTCAAGCT...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 2 (lower is better)
Translates to: RGYVINNQERIYSCTSLIWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGAGAATAATATACAACTaGCTAAGGGGCTATGTGATA +
Preference number: 2 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLRIIYN*LRGYVI
Trigger: TATCACATAGCCCCTTAGCCAGTTGTATATTATTCT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR GCA 72 bp TTGCTCTATTGCCCAGGTGGCGTGATCAAGGCTCACTaGAGCCTCAGCCACCCCAGGCTCAGGAGATCCTCC +
Preference number: 3 (lower is better)
Translates to: LLYCPGGVIKAH*SLSHPRLRRSS
Trigger: GGAGGATCTCCTGAGCCTGGGGTGGCTGAGGCTGCAGTGAGCCTTGATCACGCCACCTGGGCAATAGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448850.5
3UTR CCA 72 bp TATTCTATAAATGGACACCGATGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCAGAGGCTGCTGTGGCG +
Preference number: 3 (lower is better)
Translates to: YSINGHRWVVKQ*FCCPTSEAAVA
Trigger: CGCCACAGCAGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR-3UTR CAA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACAGGGTCTTGCTCTATaGCCCAGGTGGCGTGATCAA +
Preference number: 3 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEQGLAL*PRWRDQ
Trigger: TTGATCACGCCACCTGGGCAATAGAGCAAGACCCTG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
3UTR-3UTR CAA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTGTTTTGGAGAATTCTaGGTAATTGAAGACCAGCAG +
Preference number: 3 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPCFGEF*VIEDQQ
Trigger: CTGCTGGTCTTCAATTACCAAGAATTCTCCAAAACA...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR CAA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGAGTTCAGGCATCTACTaGTGTTACAGCACAGCTGTC +
Preference number: 3 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLSSGIY*CYSTAV
Trigger: GACAGCTGTGCTGTAACACAAGTAGATGCCTGAACT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR CAA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGTAGAAATGTGGTCTaGCCATGTTTCCCATTCTGG +
Preference number: 3 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKECRNVV*PCFPFW
Trigger: CCAGAATGGGAAACATGGCAAGACCACATTTCTACA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
3UTR-3UTR CAA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGAGTTCAGGCATCTACTaGTGTTACAGCACAGCTGTC +
Preference number: 3 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWSSGIY*CYSTAV
Trigger: GACAGCTGTGCTGTAACACAAGTAGATGCCTGAACT...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR-3UTR CAA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAAGTTCAGGCATCTACTaGTGTTACAGCACAGCTGTC +
Preference number: 3 (lower is better)
Translates to: RGYVINNQERIYSCTSLISSGIY*CYSTAV
Trigger: GACAGCTGTGCTGTAACACAAGTAGATGCCTGAACT...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
3UTR-3UTR CAA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATTGTTTTGGAGAATTCTaGGTAATTGAAGACCAGCAG +
Preference number: 3 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYCFGEF*VIEDQQ
Trigger: CTGCTGGTCTTCAATTACCAAGAATTCTCCAAAACA...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR CCA 72 bp TTAATTGGGTCACAAACCACAAGAATAATATACAACTaGCTAAGGGGCTATGTGATAAATAATCAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: LIGSQTTRIIYN*LRGYVINNQER
Trigger: TCTCTCCTGATTATTTATCACATAGCCCCTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
3UTR TCA 72 bp GTAATACAGTGTAGAAAGCGATCATGTCATAAGCAATaGTTCTGTACAATCATCCTGCAGAAAATTGTTTTG +
Preference number: 3 (lower is better)
Translates to: VIQCRKRSCHKQ*FCTIILQKIVL
Trigger: CAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTCTACACTGTATTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGCAGCATCGCGACCCTaGGCGGGGCACCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAAASRP*AGHRVR
Trigger: GCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGC...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000439274.6
CDS-3UTR GCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGCAGCATCGCGACCCTaGGCGGGGCACCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFAASRP*AGHRVR
Trigger: GCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR TCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGGCGCTCCTCTGGGGTaGCAGCGGCGTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAGAPLG*QRRQPP
Trigger: TGGAGGTTGACGCCGCTGTCACCCCAGAGGAGCGCC...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCCCGAGTGCGCTGCTGTaGGAGTGGGATCCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFPSALL*EWDPPR
Trigger: ACGCGGCGGATCCCACTCGCACAGCAGCGCACTCGG...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTGCGCTGCTGTGCGAGTaGGATCCGCCGCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPALLCE*DPPRPC
Trigger: GCAAGGACGCGGCGGATCCCACTCGCACAGCAGCGC...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCCAGGTGGCGCTCCTCTaGGGTGACAGCGGCGTCAAC +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFQVALL*GDSGVN
Trigger: GTTGACGCCGCTGTCACCCCAGAGGAGCGCCACCTG...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGTGGGAGGGAGAGTCTaGGGCCAGGAGAGGGACGGT +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFVGGRV*GQERDG
Trigger: ACCGTCCCTCTCCTGGCCCCAGACTCTCCCTCCCAC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCGCAGCATCGCGACCCTaGGCGGGGCACCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSAASRP*AGHRVR
Trigger: GCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGC...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000439274.6
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGGATGGGTCTTGCACTaGTTGCGGCCCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAGWVLH*LRPRLH
Trigger: GTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCC...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEASGDGS*TACGPA
Trigger: AGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTCAGGTGGCGCTCCTCTaGGGTGACAGCGGCGTCAAC +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPQVALL*GDSGVN
Trigger: GTTGACGCCGCTGTCACCCCAGAGGAGCGCCACCTG...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTCAGCCTGCAGAGCGGTaGTGTAGTTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAQPAER*CSSPGP
Trigger: TGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTG...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGGCGCTCCTCTGGGGTaGCAGCGGCGTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLGAPLG*QRRQPP
Trigger: TGGAGGTTGACGCCGCTGTCACCCCAGAGGAGCGCC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGGCGCTCCTCTGGGGTaGCAGCGGCGTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFGAPLG*QRRQPP
Trigger: TGGAGGTTGACGCCGCTGTCACCCCAGAGGAGCGCC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGGTACCTGGGCTTCGTaGACAGTGGGAGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFGTWAS*TVGGRV
Trigger: GACTCTCCCTCCCACTGTTCACGAAGCCCAGGTACC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359726.7
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCGCAGCATCGCGACCCTaGGCGGGGCACCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSAASRP*AGHRVR
Trigger: GCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGC...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTCAGAACCTGGTCGAGTaGTCAGTCCTCGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAQNLVE*SVLGRQ
Trigger: CTGCCGACCGAGGACTGACCACTCGACCAGGTTCTG...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGCGCTGCCGAGGAAACTaGCGGAGCCCGAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLRCRGN*RSPSAA
Trigger: CGCCGCGCTCGGGCTCCGTCAGTTTCCTCGGCAGCG...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357903.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCCGAGTGCGCTGCTGTaGGAGTGGGATCCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSPSALL*EWDPPR
Trigger: ACGCGGCGGATCCCACTCGCACAGCAGCGCACTCGG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCGCGCGGGGCACCGAGTaGGCTGCTGTGCGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSARGTE*AAVRVG
Trigger: TCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGC...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCGCGCTGCTGTGCGAGTaGGATCCGCCGCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSALLCE*DPPRPC
Trigger: GCAAGGACGCGGCGGATCCCACTCGCACAGCAGCGC...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTCTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPLWWWW*WWQCWW
Trigger: CCACCAGCATTGCCACCACCACCACCACCACCACAG...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTCAGAACCTGGTCGAGTaGTCAGTCCTCGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPQNLVE*SVLGRQ
Trigger: CTGCCGACCGAGGACTGACCACTCGACCAGGTTCTG...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCAGGTGGCGCTCCTCTaGGGTGACAGCGGCGTCAAC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLQVALL*GDSGVN
Trigger: GTTGACGCCGCTGTCACCCCAGAGGAGCGCCACCTG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTTGCATCTTGGACAGGTaGCGCTCCTCTGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEACILDR*RSSGVT
Trigger: TGTCACCCCAGAGGAGCGCCACCTGTCCAAGATGCA...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCGGCGCTCCTCTGGGGTaGCAGCGGCGTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSGAPLG*QRRQPP
Trigger: TGGAGGTTGACGCCGCTGTCACCCCAGAGGAGCGCC...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATGGCGCTCCTCTGGGGTaGCAGCGGCGTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYGAPLG*QRRQPP
Trigger: TGGAGGTTGACGCCGCTGTCACCCCAGAGGAGCGCC...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGCGCGGGGCACCGAGTaGGCTGCTGTGCGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSARGTE*AAVRVG
Trigger: TCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR GCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGGCGCGGGGCACCGAGTaGGCTGCTGTGCGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLARGTE*AAVRVG
Trigger: TCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGC...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGCGCGGGGCACCGAGTaGGCTGCTGTGCGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAARGTE*AAVRVG
Trigger: TCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGC...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACGCAGCATCGCGACCCTaGGCGGGGCACCGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYAASRP*AGHRVR
Trigger: GCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGC...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000439274.6
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGGGTCTTGCACTGCTTaGGGCCCCGCTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFGSCTA*GPACTS
Trigger: ACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGGGTCTTGCACTGCTTaGGGCCCCGCTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSGSCTA*GPACTS
Trigger: ACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCC...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGGATGGGTCTTGCACTaGTTGCGGCCCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLGWVLH*LRPRLH
Trigger: GTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSSGDGS*TACGPA
Trigger: AGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACT...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTCGCAGGGCAGCAACATaGCGTAGTCATGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEARRAAT*RSHASW
Trigger: CCAACTTGCATGACTACGGCATGTTGCTGCCCTGCG...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTTGCATAGTCTGTGTCTaGTCCGCCCCACCAGACATC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEACIVCV*SAPPDI
Trigger: GATGTCTGGTGGGGCGGAGCAGACACAGACTATGCA...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCTCCAACTTCAGAGGCTaGTGTGGCGGGGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFSNFRG*CGGGLV
Trigger: AACTAGACCCCCGCCACAGCAGCCTCTGAAGTTGGA...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGCGCTGCTGTGCGAGTaGGATCCGCCGCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSALLCE*DPPRPC
Trigger: GCAAGGACGCGGCGGATCCCACTCGCACAGCAGCGC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCTGTCAACCCAGAACCTaGTCGAGTGGTCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFCQPRT*SSGQSS
Trigger: CGAGGACTGACCACTCGACCAGGTTCTGGGTTGACA...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGACCTGGGACCGGATCTaGGCGGCTTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLTWDRI*AAFLGS
Trigger: GGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAACCTGGGACCGGATCTaGGCGGCTTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSTWDRI*AAFLGS
Trigger: GGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGT...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGGCGCTCCTCTGGGGTaGCAGCGGCGTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAGAPLG*QRRQPP
Trigger: TGGAGGTTGACGCCGCTGTCACCCCAGAGGAGCGCC...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTACTCCCACGTTCACATaGAGCATCCCCCATCGATTC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEATPTFT*SIPHRF
Trigger: GAATCGATGGGGGATGCTTCATGTGAACGTGGGAGT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGCCGAGTGCGCTGCTGTaGGAGTGGGATCCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLPSALL*EWDPPR
Trigger: ACGCGGCGGATCCCACTCGCACAGCAGCGCACTCGG...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFACGPA*TSSGWS
Trigger: TGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSACGPA*TSSGWS
Trigger: TGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGC...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACCAGCGGGAGATCATTaGTCGGCACGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEPAGDH*SARPRL
Trigger: GAGACGGGGCCGTGCCGAGCAATGATCTCCCGCTGG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGACATTCTCTCTCGGTaGTTGGCCTCAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFDILSR*LASSLS
Trigger: AGAGAGGCTTGAGGCCAAGCACCGAGAGAGAATGTC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTCGCACAGCAAGGCTGTaGTATTTAGGCGTGGATCAC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEARTARL*YLGVDH
Trigger: GTGATCCACGCCTAAATAGCACAGCCTTGCTGTGCG...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440126.7
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCGCGCTGCTGTGCGAGTaGGATCCGCCGCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIALLCE*DPPRPC
Trigger: GCAAGGACGCGGCGGATCCCACTCGCACAGCAGCGC...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCCGCTTGCACCAGTTCTaGATGGTCACTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFRLHQF*MVTGWL
Trigger: CAACCAACCAGTGACCATCCAGAACTGGTGCAAGCG...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTCACTGCATGTCTCTTTaGCGACGGTGTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAHCMSL*RRCASE
Trigger: TTCACTGGCACACCGTCGCCAAAGAGACATGCAGTG...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSLWWWW*WWQCWW
Trigger: CCACCAGCATTGCCACCACCACCACCACCACCACAG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGCTGCTGTCTCTCGTTaGCTGCTTCCTGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFAAVSR*LLPVPK
Trigger: CTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCCTTCGTTTTCTGTGTTaGCTGGCACAGAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFLRFLC*LAQSQP
Trigger: GGGCTGACTCTGTGCCAGCCAACACAGAAAACGAAG...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAACAGCCTGCAGAGCGGTaGTGTAGTTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQQPAER*CSSPGP
Trigger: TGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTG...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCAGCCTGCAGAGCGGTaGTGTAGTTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSQPAER*CSSPGP
Trigger: TGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGGCGCTCCTCTGGGGTaGCAGCGGCGTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKGAPLG*QRRQPP
Trigger: TGGAGGTTGACGCCGCTGTCACCCCAGAGGAGCGCC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACCCGAGTGCGCTGCTGTaGGAGTGGGATCCGCCGCGT +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYPSALL*EWDPPR
Trigger: ACGCGGCGGATCCCACTCGCACAGCAGCGCACTCGG...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAGGGCACCGAGTGCGCTaGTGTGCGAGTGGGATCCGC +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKGHRVR*CASGIR
Trigger: GCGGATCCCACTCGCACAGCAGCGCACTCGGTGCCC...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR GCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGGGTCTTGCACTGCTTaGGGCCCCGCTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSGSCTA*GPACTS
Trigger: ACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGGGTCTTGCACTGCTTaGGGCCCCGCTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEGSCTA*GPACTS
Trigger: ACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATGGATGGGTCTTGCACTaGTTGCGGCCCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYGWVLH*LRPRLH
Trigger: GTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCC...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGGATGGGTCTTGCACTaGTTGCGGCCCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSGWVLH*LRPRLH
Trigger: GTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGGATGGGTCTTGCACTaGTTGCGGCCCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEGWVLH*LRPRLH
Trigger: GTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKESGDGS*TACGPA
Trigger: AGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGTCTTCACTCCCATCTaGATAGTCTGTGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAVFTPI*IVCVCS
Trigger: GGAGCAGACACAGACTATGCAGATGGGAGTGAAGAC...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCCCAGCGGGAGATCATTaGTCGGCACGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIPAGDH*SARPRL
Trigger: GAGACGGGGCCGTGCCGAGCAATGATCTCCCGCTGG...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000357903.7
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACCAGCGGGAGATCATTaGTCGGCACGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAPAGDH*SARPRL
Trigger: GAGACGGGGCCGTGCCGAGCAATGATCTCCCGCTGG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATTTGGGACATGGCGCTaGCACACACGGCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSFGTWR*HTRPCS
Trigger: ACTGCATGGCCGTGTGTGGCAGCGCCATGTCCCAAA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000439274.6
CDS-3UTR GCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCTCCACCATGCGCACATaGTCGAAATGCTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFSTMRT*SKCFRV
Trigger: CACCCTAAAGCATTTCGAGCATGTGCGCATGGTGGA...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTTCCACCATGCGCACATaGTCGAAATGCTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEASTMRT*SKCFRV
Trigger: CACCCTAAAGCATTTCGAGCATGTGCGCATGGTGGA...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCTGCACCAGTTCTGGATaGTCACTGGTTGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFCTSSG*SLVGWL
Trigger: AAGCCAACCAACCAGTGACCATCCAGAACTGGTGCA...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTATCACAAAGTGGGGATaGGTCTTGCACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPITKWG*VLHCLR
Trigger: CCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGAT...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSLWWWW*WWQCWW
Trigger: CCACCAGCATTGCCACCACCACCACCACCACCACAG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTCATTCTCTCATGACCTaGGACATTCTCTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAHSLMT*DILSRC
Trigger: GCACCGAGAGAGAATGTCCCAGGTCATGAGAGAATG...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTGCTGCTGTCTCTCGTTaGCTGCTTCCTGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPAAVSR*LLPVPK
Trigger: CTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGC...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTCTGAGCGGCTTTCTTaGGATCCACCATGCGCACAT +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPSERLS*DPPCAH
Trigger: ATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGA...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGAAGGAGCTCCACGGTaGTTTTCGTTTCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAEGAPR*FSFRSK
Trigger: CTTTGACCGAAACGAAAACCACCGTGGAGCTCCTTC...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGTTTTCTGTGTTGGCTaGCACAGAGTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFVFCVG*HRVSPK
Trigger: TTTGGGGCTGACTCTGTGCCAGCCAACACAGAAAAC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGCAGGTGGCGCTCCTCTaGGGTGACAGCGGCGTCAAC +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLQVALL*GDSGVN
Trigger: GTTGACGCCGCTGTCACCCCAGAGGAGCGCCACCTG...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCCAGGTGGCGCTCCTCTaGGGTGACAGCGGCGTCAAC +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIQVALL*GDSGVN
Trigger: GTTGACGCCGCTGTCACCCCAGAGGAGCGCCACCTG...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGGTGGCGCTCCTCTaGGGTGACAGCGGCGTCAAC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAQVALL*GDSGVN
Trigger: GTTGACGCCGCTGTCACCCCAGAGGAGCGCCACCTG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACGTTCTGCTGCATCTTaGACAGGTGGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSRSAAS*TGGAPL
Trigger: CAGAGGAGCGCCACCTGTCCAAGATGCAGCAGAACG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCGTTCTGCTGCATCTTaGACAGGTGGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLRSAAS*TGGAPL
Trigger: CAGAGGAGCGCCACCTGTCCAAGATGCAGCAGAACG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACAGCCTGCAGAGCGGTaGTGTAGTTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEQPAER*CSSPGP
Trigger: TGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR TCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAACCTGGGACCGGATCTaGGCGGCTTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKETWDRI*AAFLGS
Trigger: GGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR TCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGGAGATCGTCCAGGCTaGACTCTCCATTCACGGGAA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFGDRPG*TLHSRE
Trigger: TTCCCGTGAATGGAGAGTTCAGCCTGGACGATCTCC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACCATCCTCGGGAGGGTaGGTCAACAGCATGTCAACA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSPSSGG*VNSMST
Trigger: TGTTGACATGCTGTTGACTCACCCTCCCGAGGATGG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440126.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGGCAATACTGCAGGATaGCTTCCTTGGTATCAATGC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAGNTAG*LPWYQC
Trigger: GCATTGATACCAAGGAAGGCATCCTGCAGTATTGCC...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYACGPA*TSSGWS
Trigger: TGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGC...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEACGPA*TSSGWS
Trigger: TGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGGGTCTTGCACTGCTTaGGGCCCCGCTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSGSCTA*GPACTS
Trigger: ACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGGATGGGTCTTGCACTaGTTGCGGCCCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSGWVLH*LRPRLH
Trigger: GTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSSGDGS*TACGPA
Trigger: AGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLSGDGS*TACGPA
Trigger: AGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCGCAGGGCAGCAACATaGCGTAGTCATGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLRRAAT*RSHASW
Trigger: CCAACTTGCATGACTACGGCATGTTGCTGCCCTGCG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATGCATAGTCTGTGTCTaGTCCGCCCCACCAGACATC +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSCIVCV*SAPPDI
Trigger: GATGTCTGGTGGGGCGGAGCAGACACAGACTATGCA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCTGGTGGTGGTGGCAATaGTGGTGGTTCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFWWWWQ*WWFSLW
Trigger: CCACAGAGAGAACCACCAGCATTGCCACCACCACCA...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATGGTGGTGGTGGCAATaGTGGTGGTTCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSWWWWQ*WWFSLW
Trigger: CCACAGAGAGAACCACCAGCATTGCCACCACCACCA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGCCAGCGGGAGATCATTaGTCGGCACGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQPAGDH*SARPRL
Trigger: GAGACGGGGCCGTGCCGAGCAATGATCTCCCGCTGG...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACCAGCGGGAGATCATTaGTCGGCACGGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIPAGDH*SARPRL
Trigger: GAGACGGGGCCGTGCCGAGCAATGATCTCCCGCTGG...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTCGCACATGCTCGAAATaGTTTAGGGTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPRTCSK*FRVCCL
Trigger: CAGACAGCACACCCTAAAGCATTTCGAGCATGTGCG...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTCCACCATGCGCACATaGTCGAAATGCTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPSTMRT*SKCFRV
Trigger: CACCCTAAAGCATTTCGAGCATGTGCGCATGGTGGA...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGAATCTCCTCGGCCACTaGAGGCACGTTGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLNLLGH*RHVVEQ
Trigger: CTGCTCTACAACGTGCCTGCAGTGGCCGAGGAGATT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTCAGCCCCAAAAGAATaGCACGGCTGGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLSAPKE*HGWRSS
Trigger: GGACGATCTCCAGCCGTGGCATTCTTTTGGGGCTGA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATCAGCCCCAAAAGAATaGCACGGCTGGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSSAPKE*HGWRSS
Trigger: GGACGATCTCCAGCCGTGGCATTCTTTTGGGGCTGA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACAGAACATGGCAATCTaGGGTTCAGCCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSQNMAI*GSASRP
Trigger: TGGCCTGCTGGCTGAACCCCAGATTGCCATGTTCTG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTTGGATGGTCACTGGTTaGTTGGCTTCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAWMVTG*LASTTL
Trigger: CAATGTGGTAGAAGCCAACCAACCAGTGACCATCCA...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPVLDGH*LVGFYH
Trigger: GTGGTAGAAGCCAACCAACCAGTGACCATCCAGAAC...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTCTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSLWWWW*WWQCWW
Trigger: CCACCAGCATTGCCACCACCACCACCACCACCACAG...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKELWWWW*WWQCWW
Trigger: CCACCAGCATTGCCACCACCACCACCACCACCACAG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCCCTCAAGCCTCTCTTTaGCTTTCTGGAAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFPQASL*LSGNGH
Trigger: ATGCCCATTTCCAGAAAGCCAAAGAGAGGCTTGAGG...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTCATTCTCTCATGACCTaGGACATTCTCTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPHSLMT*DILSRC
Trigger: GCACCGAGAGAGAATGTCCCAGGTCATGAGAGAATG...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGCATGGCTTCCACTCTaGCCATGTGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFAWLPL*PCVSPP
Trigger: TGGTGGAGACACACATGGCCAGAGTGGAAGCCATGC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGCATGGCTTCCACTCTaGCCATGTGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSAWLPL*PCVSPP
Trigger: TGGTGGAGACACACATGGCCAGAGTGGAAGCCATGC...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATCAGAACCTGGTCGAGTaGTCAGTCCTCGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYQNLVE*SVLGRQ
Trigger: CTGCCGACCGAGGACTGACCACTCGACCAGGTTCTG...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTGTCAACCCAGAACCTaGTCGAGTGGTCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLCQPRT*SSGQSS
Trigger: CGAGGACTGACCACTCGACCAGGTTCTGGGTTGACA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAACAGGTGGCGCTCCTCTaGGGTGACAGCGGCGTCAAC +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKQVALL*GDSGVN
Trigger: GTTGACGCCGCTGTCACCCCAGAGGAGCGCCACCTG...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTGCATCTTGGACAGGTaGCGCTCCTCTGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSCILDR*RSSGVT
Trigger: TGTCACCCCAGAGGAGCGCCACCTGTCCAAGATGCA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAACGTTCTGCTGCATCTTaGACAGGTGGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQRSAAS*TGGAPL
Trigger: CAGAGGAGCGCCACCTGTCCAAGATGCAGCAGAACG...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCCAGCCTGCAGAGCGGTaGTGTAGTTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSQPAER*CSSPGP
Trigger: TGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTG...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGCAGCCTGCAGAGCGGTaGTGTAGTTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLQPAER*CSSPGP
Trigger: TGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTG...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGAGCATATTGAACACGTaGCGAGGCCGAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLSILNT*RGRGGT
Trigger: TGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGCATATTGAACACGTaGCGAGGCCGAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFSILNT*RGRGGT
Trigger: TGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCT...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAAGCATATTGAACACGTaGCGAGGCCGAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSSILNT*RGRGGT
Trigger: TGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCT...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAACCTGGGACCGGATCTaGGCGGCTTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTATWDRI*AAFLGS
Trigger: GGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGACCTGGGACCGGATCTaGGCGGCTTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLTWDRI*AAFLGS
Trigger: GGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACCTGGGACCGGATCTaGGCGGCTTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSTWDRI*AAFLGS
Trigger: GGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTACTTCTTGGCAATACTaGAGGATGCCTTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEATSWQY*RMPSLV
Trigger: TACCAAGGAAGGCATCCTGCAGTATTGCCAAGAAGT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIACGPA*TSSGWS
Trigger: TGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGC...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSACGPA*TSSGWS
Trigger: TGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACGGGTCTTGCACTGCTTaGGGCCCCGCTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYGSCTA*GPACTS
Trigger: ACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCC...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAGGGTCTTGCACTGCTTaGGGCCCCGCTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKGSCTA*GPACTS
Trigger: ACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCC...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAGGATGGGTCTTGCACTaGTTGCGGCCCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKGWVLH*LRPRLH
Trigger: GTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCC...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACGGATGGGTCTTGCACTaGTTGCGGCCCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYGWVLH*LRPRLH
Trigger: GTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCC...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKSGDGS*TACGPA
Trigger: AGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACT...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKSGDGS*TACGPA
Trigger: AGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACT...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCGCAGGGCAGCAACATaGCGTAGTCATGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSRRAAT*RSHASW
Trigger: CCAACTTGCATGACTACGGCATGTTGCTGCCCTGCG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACAAAGTTGTTCCGGTTaGCGCCACATCCGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSQSCSG*RHIRRK
Trigger: TTTACGGCGGATGTGGCGGCAACCGGAACAACTTTG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGACATTCTCTCTCGGTaGTTGGCCTCAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLDILSR*LASSLS
Trigger: AGAGAGGCTTGAGGCCAAGCACCGAGAGAGAATGTC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTCTTTGCTTGACGTTCTaGCTCTTCCCATTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEALCLTF*LFPFSH
Trigger: ATGAGAGAATGGGAAGAGGCAGAACGTCAAGCAAAG...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTCTGTCTCTCGTTGGCTaGTTCCTGTTCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPLSLVG*FLFQRF
Trigger: GAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAG...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAAATCTCCTCGGCCACTaGAGGCACGTTGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQNLLGH*RHVVEQ
Trigger: CTGCTCTACAACGTGCCTGCAGTGGCCGAGGAGATT...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAATCTCCTCGGCCACTaGAGGCACGTTGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSNLLGH*RHVVEQ
Trigger: CTGCTCTACAACGTGCCTGCAGTGGCCGAGGAGATT...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTCCAACTTCAGAGGCTaGTGTGGCGGGGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSSNFRG*CGGGLV
Trigger: AACTAGACCCCCGCCACAGCAGCCTCTGAAGTTGGA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCCAGCATTACCATCAGTaGGTACCTCCAGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSQHYHQ*VPPAPE
Trigger: CTCGGGCGCTGGAGGTACCCACTGATGGTAATGCTG...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGTCTGCCACAGAACATaGCAATCTGGGGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFVCHRT*QSGVQP
Trigger: TGGCTGAACCCCAGATTGCCATGTTCTGTGGCAGAC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGTCTGCCACAGAACATaGCAATCTGGGGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLVCHRT*QSGVQP
Trigger: TGGCTGAACCCCAGATTGCCATGTTCTGTGGCAGAC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACGCTTGCACCAGTTCTaGATGGTCACTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSRLHQF*MVTGWL
Trigger: CAACCAACCAGTGACCATCCAGAACTGGTGCAAGCG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCACTGCATGTCTCTTTaGCGACGGTGTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLHCMSL*RRCASE
Trigger: TTCACTGGCACACCGTCGCCAAAGAGACATGCAGTG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSWWWQC*WFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLWWWQC*WFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCCTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYILWWWW*WWQCWW
Trigger: CCACCAGCATTGCCACCACCACCACCACCACCACAG...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTALWWWW*WWQCWW
Trigger: CCACCAGCATTGCCACCACCACCACCACCACCACAG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCTTCTCTCTCGGTGCTTaGCCTCAAGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFFSLGA*PQASLW
Trigger: CCAAAGAGAGGCTTGAGGCCAAGCACCGAGAGAGAA...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATTCTCTCTCGGTGCTTaGCCTCAAGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSFSLGA*PQASLW
Trigger: CCAAAGAGAGGCTTGAGGCCAAGCACCGAGAGAGAA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGCTGCTGTCTCTCGTTaGCTGCTTCCTGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFAAVSR*LLPVPK
Trigger: CTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGCTGCTGTCTCTCGTTaGCTGCTTCCTGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSAAVSR*LLPVPK
Trigger: CTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGC...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCGCATGGCTTCCACTCTaGCCATGTGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSAWLPL*PCVSPP
Trigger: TGGTGGAGACACACATGGCCAGAGTGGAAGCCATGC...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTCTGAGCGGCTTTCTTaGGATCCACCATGCGCACAT +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLSERLS*DPPCAH
Trigger: ATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATCTGAGCGGCTTTCTTaGGATCCACCATGCGCACAT +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSSERLS*DPPCAH
Trigger: ATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCCTTCGTTTTCTGTGTTaGCTGGCACAGAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFLRFLC*LAQSQP
Trigger: GGGCTGACTCTGTGCCAGCCAACACAGAAAACGAAG...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCCAGAACCTGGTCGAGTaGTCAGTCCTCGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIQNLVE*SVLGRQ
Trigger: CTGCCGACCGAGGACTGACCACTCGACCAGGTTCTG...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTGCATCTTGGACAGGTaGCGCTCCTCTGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSCILDR*RSSGVT
Trigger: TGTCACCCCAGAGGAGCGCCACCTGTCCAAGATGCA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACGGGCTTCGTGAACAGTaGGAGGGAGAGTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYGLREQ*EGESGA
Trigger: GGCCCCAGACTCTCCCTCCCACTGTTCACGAAGCCC...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359726.7
CDS-3UTR TCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGCCTGCAGAGCGGTaGTGTAGTTCTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIQPAER*CSSPGP
Trigger: TGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTG...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACACCTGGGACCGGATCTaGGCGGCTTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYTWDRI*AAFLGS
Trigger: GGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGT...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTCATCAACTTCATCCTaGATCTCCTCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLSSTSS*ISSATA
Trigger: TGCAGTGGCCGAGGAGATTCAGGATGAAGTTGATGA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCCGGTCAAAGATGGCATaGGAGCATCGTTTCCGTAAC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFRSKMA*EHRFRN
Trigger: GTTACGGAAACGATGCTCTCATGCCATCTTTGACCG...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCGGTCAAAGATGGCATaGGAGCATCGTTTCCGTAAC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLRSKMA*EHRFRN
Trigger: GTTACGGAAACGATGCTCTCATGCCATCTTTGACCG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTATGAACTTCATATCCTaGGTCATGTCGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAMNFIS*VMSEFC
Trigger: GCAGAATTCCGACATGACTCAGGATATGAAGTTCAT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAACTCCCACGTTCACATaGAGCATCCCCCATCGATTC +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQTPTFT*SIPHRF
Trigger: GAATCGATGGGGGATGCTTCATGTGAACGTGGGAGT...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGCACCAACTTCATCCTaGATCTCCTCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEAPTSS*ISSATA
Trigger: TGCAGTGGCCGAGGAGATTCAGGATGAAGTTGGTGC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTGTGCATGTTCAGTCTaGCACAGAACATGGCAATCT +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPCACSV*HRTWQS
Trigger: AGATTGCCATGTTCTGTGGCAGACTGAACATGCACA...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTCTTCCTTGGTATCAATaGAGGTTTTGGTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPLPWYQ*RFWSLM
Trigger: CATCAGGGACCAAAACCTGCATTGATACCAAGGAAG...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTACTTCTTGGCAATACTaGAGGATGCCTTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPTSWQY*RMPSLV
Trigger: TACCAAGGAAGGCATCCTGCAGTATTGCCAAGAAGT...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQACGPA*TSSGWS
Trigger: TGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGC...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWACGPA*TSSGWS
Trigger: TGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGC...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTCGCAGGGCAGCAACATaGCGTAGTCATGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSRRAAT*RSHASW
Trigger: CCAACTTGCATGACTACGGCATGTTGCTGCCCTGCG...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACGCAGGGCAGCAACATaGCGTAGTCATGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKERRAAT*RSHASW
Trigger: CCAACTTGCATGACTACGGCATGTTGCTGCCCTGCG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATTGCATAGTCTGTGTCTaGTCCGCCCCACCAGACATC +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYCIVCV*SAPPDI
Trigger: GATGTCTGGTGGGGCGGAGCAGACACAGACTATGCA...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTGCATAGTCTGTGTCTaGTCCGCCCCACCAGACATC +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSCIVCV*SAPPDI
Trigger: GATGTCTGGTGGGGCGGAGCAGACACAGACTATGCA...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGCATAGTCTGTGTCTaGTCCGCCCCACCAGACATC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKECIVCV*SAPPDI
Trigger: GATGTCTGGTGGGGCGGAGCAGACACAGACTATGCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGTCTTCACTCCCATCTaGATAGTCTGTGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLVFTPI*IVCVCS
Trigger: GGAGCAGACACAGACTATGCAGATGGGAGTGAAGAC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGGTGGTGGTGGCAATaGTGGTGGTTCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEWWWWQ*WWFSLW
Trigger: CCACAGAGAGAACCACCAGCATTGCCACCACCACCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAACAAAGTTGTTCCGGTTaGCGCCACATCCGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQQSCSG*RHIRRK
Trigger: TTTACGGCGGATGTGGCGGCAACCGGAACAACTTTG...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000357903.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCTGCCACACACGGCCATaGAGTACTCTTCTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFCHTRP*STLLCQ
Trigger: TTGACACAGAAGAGTACTGCATGGCCGTGTGTGGCA...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCTTTAGGCAAGTTCTTTaGTTGACGTTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFFRQVL*LTFCLF
Trigger: GAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAA...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTAAATGCTTTAGGGTGTaGTGTCTGTCCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAKCFRV*CLSFCS
Trigger: AGAACAGAAGGACAGACAGCACACCCTAAAGCATTT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCGCACATGCTCGAAATaGTTTAGGGTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLRTCSK*FRVCCL
Trigger: CAGACAGCACACCCTAAAGCATTTCGAGCATGTGCG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTCCACCATGCGCACATaGTCGAAATGCTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLSTMRT*SKCFRV
Trigger: CACCCTAAAGCATTTCGAGCATGTGCGCATGGTGGA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATAATCTCCTCGGCCACTaGAGGCACGTTGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYNLLGH*RHVVEQ
Trigger: CTGCTCTACAACGTGCCTGCAGTGGCCGAGGAGATT...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAAATCTCCTCGGCCACTaGAGGCACGTTGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKENLLGH*RHVVEQ
Trigger: CTGCTCTACAACGTGCCTGCAGTGGCCGAGGAGATT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATTCAGCCCCAAAAGAATaGCACGGCTGGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYSAPKE*HGWRSS
Trigger: GGACGATCTCCAGCCGTGGCATTCTTTTGGGGCTGA...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTGTCATGTCGGAATTCTaGATCCATCTTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAVMSEF*IHLHFR
Trigger: TCTGAAGTGAAGATGGATGCAGAATTCCGACATGAC...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGTCATGTCGGAATTCTaGATCCATCTTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFVMSEF*IHLHFR
Trigger: TCTGAAGTGAAGATGGATGCAGAATTCCGACATGAC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTCCAACTTCAGAGGCTaGTGTGGCGGGGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSSNFRG*CGGGLV
Trigger: AACTAGACCCCCGCCACAGCAGCCTCTGAAGTTGGA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGGGCTCAAGTCATCTaGCCACCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEWAQVI*PPWPPK
Trigger: TTTGGGAGGCCAAGGTGGGCAGATGACTTGAGCCCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCGTCTGCCACAGAACATaGCAATCTGGGGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSVCHRT*QSGVQP
Trigger: TGGCTGAACCCCAGATTGCCATGTTCTGTGGCAGAC...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSVLDGH*LVGFYH
Trigger: GTGGTAGAAGCCAACCAACCAGTGACCATCCAGAAC...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFVLDGH*LVGFYH
Trigger: GTGGTAGAAGCCAACCAACCAGTGACCATCCAGAAC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCTGCACCAGTTCTGGATaGTCACTGGTTGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFCTSSG*SLVGWL
Trigger: AAGCCAACCAACCAGTGACCATCCAGAACTGGTGCA...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAACGCTTGCACCAGTTCTaGATGGTCACTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQRLHQF*MVTGWL
Trigger: CAACCAACCAGTGACCATCCAGAACTGGTGCAAGCG...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCGCTTGCACCAGTTCTaGATGGTCACTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSRLHQF*MVTGWL
Trigger: CAACCAACCAGTGACCATCCAGAACTGGTGCAAGCG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAATCACAAAGTGGGGATaGGTCTTGCACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQITKWG*VLHCLR
Trigger: CCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGAT...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCATCACAAAGTGGGGATaGGTCTTGCACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSITKWG*VLHCLR
Trigger: CCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGAT...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTACATCCATCCTCTCCTaGTGTAAGAATTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEATSILS*CKNLHL
Trigger: CAAGTGCAAATTCTTACACCAGGAGAGGATGGATGT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAACACTGCATGTCTCTTTaGCGACGGTGTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQHCMSL*RRCASE
Trigger: TTCACTGGCACACCGTCGCCAAAGAGACATGCAGTG...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTGGTGGTTCTCTCTGTaGCTTCTTCGTAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLWWFSL*LLRRVP
Trigger: AGGAACCCTACGAAGAAGCCACAGAGAGAACCACCA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCTGGTGGTTCTCTCTGTaGCTTCTTCGTAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFWWFSL*LLRRVP
Trigger: AGGAACCCTACGAAGAAGCCACAGAGAGAACCACCA...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATGGTGGCAATGCTGGTaGTTCTCTCTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSWWQCW*FSLWLL
Trigger: AAGAAGCCACAGAGAGAACCACCAGCATTGCCACCA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAACTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKLWWWW*WWQCWW
Trigger: CCACCAGCATTGCCACCACCACCACCACCACCACAG...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGTAAACTTTGGGACATaGCGCTGCCACACACGGCCA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSVNFGT*RCHTRP
Trigger: TGGCCGTGTGTGGCAGCGCCATGTCCCAAAGTTTAC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000439274.6
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTCTCTCTTTGGCTTTCTaGAAATGGGCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEALSLAF*KWACSF
Trigger: GAATGAACATGCCCATTTCCAGAAAGCCAAAGAGAG...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCCTCTCTTTGGCTTTCTaGAAATGGGCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFLSLAF*KWACSF
Trigger: GAATGAACATGCCCATTTCCAGAAAGCCAAAGAGAG...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCCATTCTCTCATGACCTaGGACATTCTCTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFHSLMT*DILSRC
Trigger: GCACCGAGAGAGAATGTCCCAGGTCATGAGAGAATG...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGCATGGCTTCCACTCTaGCCATGTGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSAWLPL*PCVSPP
Trigger: TGGTGGAGACACACATGGCCAGAGTGGAAGCCATGC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGCATGGCTTCCACTCTaGCCATGTGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEAWLPL*PCVSPP
Trigger: TGGTGGAGACACACATGGCCAGAGTGGAAGCCATGC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAATCTGAGCGGCTTTCTTaGGATCCACCATGCGCACAT +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQSERLS*DPPCAH
Trigger: ATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGA...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTCTGAGCGGCTTTCTTaGGATCCACCATGCGCACAT +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSSERLS*DPPCAH
Trigger: ATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTTCCGTAACTGATCCTTaGTTCACTAATCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEASVTDP*FTNHVG
Trigger: GCCAACATGATTAGTGAACCAAGGATCAGTTACGGA...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGAAGGAGCTCCACGGTaGTTTTCGTTTCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFEGAPR*FSFRSK
Trigger: CTTTGACCGAAACGAAAACCACCGTGGAGCTCCTTC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGAAGGAGCTCCACGGTaGTTTTCGTTTCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLEGAPR*FSFRSK
Trigger: CTTTGACCGAAACGAAAACCACCGTGGAGCTCCTTC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGTTTTCTGTGTTGGCTaGCACAGAGTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSVFCVG*HRVSPK
Trigger: TTTGGGGCTGACTCTGTGCCAGCCAACACAGAAAAC...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGTTTTCTGTGTTGGCTaGCACAGAGTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFVFCVG*HRVSPK
Trigger: TTTGGGGCTGACTCTGTGCCAGCCAACACAGAAAAC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGTTTTCTGTGTTGGCTaGCACAGAGTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLVFCVG*HRVSPK
Trigger: TTTGGGGCTGACTCTGTGCCAGCCAACACAGAAAAC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAACTTCGTTTTCTGTGTTaGCTGGCACAGAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQLRFLC*LAQSQP
Trigger: GGGCTGACTCTGTGCCAGCCAACACAGAAAACGAAG...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACCAGAACCTGGTCGAGTaGTCAGTCCTCGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYQNLVE*SVLGRQ
Trigger: CTGCCGACCGAGGACTGACCACTCGACCAGGTTCTG...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGCAGAACCTGGTCGAGTaGTCAGTCCTCGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQQNLVE*SVLGRQ
Trigger: CTGCCGACCGAGGACTGACCACTCGACCAGGTTCTG...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCTGCATCTTGGACAGGTaGCGCTCCTCTGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYICILDR*RSSGVT
Trigger: TGTCACCCCAGAGGAGCGCCACCTGTCCAAGATGCA...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACGTTCTGCTGCATCTTaGACAGGTGGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTARSAAS*TGGAPL
Trigger: CAGAGGAGCGCCACCTGTCCAAGATGCAGCAGAACG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTTGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCCAGCATTACCATCAGTaGGTACCTGGGCTTCGTGAA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFQHYHQ*VPGLRE
Trigger: TTCACGAAGCCCAGGTACCCACTGATGGTAATGCTG...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359726.7
CDS-3UTR TCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACTTCTACCACATTGGTaGTCTGCAGTTCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSLLPHW*SAVQGR
Trigger: TCTACCCTGAACTGCAGATCACCAATGTGGTAGAAG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAAGCATATTGAACACGTaGCGAGGCCGAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKESILNT*RGRGGT
Trigger: TGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR TCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGACTTCTTTAGCATATTaGACACGTGACGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLTSLAY*TRDEAE
Trigger: CTCGGCCTCGTCACGTGTTCAATATGCTAAAGAAGT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAATCATCAACTTCATCCTaGATCTCCTCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQSSTSS*ISSATA
Trigger: TGCAGTGGCCGAGGAGATTCAGGATGAAGTTGATGA...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGGAGATCGTCCAGGCTaGACTCTCCATTCACGGGAA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSGDRPG*TLHSRE
Trigger: TTCCCGTGAATGGAGAGTTCAGCCTGGACGATCTCC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGGAGATCGTCCAGGCTaGACTCTCCATTCACGGGAA +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAGDRPG*TLHSRE
Trigger: TTCCCGTGAATGGAGAGTTCAGCCTGGACGATCTCC...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGGCAATACTGCAGGATaGCTTCCTTGGTATCAATGC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFGNTAG*LPWYQC
Trigger: GCATTGATACCAAGGAAGGCATCCTGCAGTATTGCC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAATGGTACTCTTCTCACTaGATGTCTCTTTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQWYSSH*MSLWRR
Trigger: CCGTCGCCAAAGAGACATGCAGTGAGAAGAGTACCA...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTGGTACTCTTCTCACTaGATGTCTCTTTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSWYSSH*MSLWRR
Trigger: CCGTCGCCAAAGAGACATGCAGTGAGAAGAGTACCA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATGCATAGTCTGTGTCTaGTCCGCCCCACCAGACATC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTACIVCV*SAPPDI
Trigger: GATGTCTGGTGGGGCGGAGCAGACACAGACTATGCA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTGCATAGTCTGTGTCTaGTCCGCCCCACCAGACATC +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLCIVCV*SAPPDI
Trigger: GATGTCTGGTGGGGCGGAGCAGACACAGACTATGCA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTGGTGGTGGTGGCAATaGTGGTGGTTCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSWWWWQ*WWFSLW
Trigger: CCACAGAGAGAACCACCAGCATTGCCACCACCACCA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCCAAAGTTGTTCCGGTTaGCGCCACATCCGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSQSCSG*RHIRRK
Trigger: TTTACGGCGGATGTGGCGGCAACCGGAACAACTTTG...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000357903.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACAAAGTTGTTCCGGTTaGCGCCACATCCGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEQSCSG*RHIRRK
Trigger: TTTACGGCGGATGTGGCGGCAACCGGAACAACTTTG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAATTTGGGACATGGCGCTaGCACACACGGCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKFGTWR*HTRPCS
Trigger: ACTGCATGGCCGTGTGTGGCAGCGCCATGTCCCAAA...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346798.8
CDS-3UTR GCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGACATTCTCTCTCGGTaGTTGGCCTCAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSDILSR*LASSLS
Trigger: AGAGAGGCTTGAGGCCAAGCACCGAGAGAGAATGTC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGACATTCTCTCTCGGTaGTTGGCCTCAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEDILSR*LASSLS
Trigger: AGAGAGGCTTGAGGCCAAGCACCGAGAGAGAATGTC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCTGTCTCTCGTTGGCTaGTTCCTGTTCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLLSLVG*FLFQRF
Trigger: GAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAATCCACCATGCGCACATaGTCGAAATGCTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQSTMRT*SKCFRV
Trigger: CACCCTAAAGCATTTCGAGCATGTGCGCATGGTGGA...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTCTTGGGATCCACCATaGGCACATGCTCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSSWDPP*AHARNA
Trigger: AGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAATCTCCTCGGCCACTaGAGGCACGTTGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSNLLGH*RHVVEQ
Trigger: CTGCTCTACAACGTGCCTGCAGTGGCCGAGGAGATT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTCAGCCCCAAAAGAATaGCACGGCTGGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSSAPKE*HGWRSS
Trigger: GGACGATCTCCAGCCGTGGCATTCTTTTGGGGCTGA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATCAGCCCCAAAAGAATaGCACGGCTGGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTASAPKE*HGWRSS
Trigger: GGACGATCTCCAGCCGTGGCATTCTTTTGGGGCTGA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTCCAACTTCAGAGGCTaGTGTGGCGGGGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLSNFRG*CGGGLV
Trigger: AACTAGACCCCCGCCACAGCAGCCTCTGAAGTTGGA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATATCAGGGGTACTGGCTaGTGTTGTAGGAATGGCGCT +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYIRGTG*CCRNGA
Trigger: AGCGCCATTCCTACAACAGCAGCCAGTACCCCTGAT...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357903.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAATCAGGGGTACTGGCTaGTGTTGTAGGAATGGCGCT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEIRGTG*CCRNGA
Trigger: AGCGCCATTCCTACAACAGCAGCCAGTACCCCTGAT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCCAGAACATGGCAATCTaGGGTTCAGCCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSQNMAI*GSASRP
Trigger: TGGCCTGCTGGCTGAACCCCAGATTGCCATGTTCTG...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATGGATGGTCACTGGTTaGTTGGCTTCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSWMVTG*LASTTL
Trigger: CAATGTGGTAGAAGCCAACCAACCAGTGACCATCCA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTGGATGGTCACTGGTTaGTTGGCTTCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLWMVTG*LASTTL
Trigger: CAATGTGGTAGAAGCCAACCAACCAGTGACCATCCA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTCGCTTGCACCAGTTCTaGATGGTCACTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSRLHQF*MVTGWL
Trigger: CAACCAACCAGTGACCATCCAGAACTGGTGCAAGCG...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACGCTTGCACCAGTTCTaGATGGTCACTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKERLHQF*MVTGWL
Trigger: CAACCAACCAGTGACCATCCAGAACTGGTGCAAGCG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAATCACAAAGTGGGGATaGGTCTTGCACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEITKWG*VLHCLR
Trigger: CCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGAT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTCACTGCATGTCTCTTTaGCGACGGTGTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSHCMSL*RRCASE
Trigger: TTCACTGGCACACCGTCGCCAAAGAGACATGCAGTG...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACACTGCATGTCTCTTTaGCGACGGTGTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEHCMSL*RRCASE
Trigger: TTCACTGGCACACCGTCGCCAAAGAGACATGCAGTG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAATGGTGGTTCTCTCTGTaGCTTCTTCGTAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQWWFSL*LLRRVP
Trigger: AGGAACCCTACGAAGAAGCCACAGAGAGAACCACCA...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAATGGTGGCAATGCTGGTaGTTCTCTCTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQWWQCW*FSLWLL
Trigger: AAGAAGCCACAGAGAGAACCACCAGCATTGCCACCA...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEWWWQC*WFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTCTCTCTCGGTGCTTaGCCTCAAGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSFSLGA*PQASLW
Trigger: CCAAAGAGAGGCTTGAGGCCAAGCACCGAGAGAGAA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATTTCTCTCTCGGTGCTTaGCCTCAAGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYFSLGA*PQASLW
Trigger: CCAAAGAGAGGCTTGAGGCCAAGCACCGAGAGAGAA...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATTCTCTCTCGGTGCTTaGCCTCAAGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEFSLGA*PQASLW
Trigger: CCAAAGAGAGGCTTGAGGCCAAGCACCGAGAGAGAA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAACATTCTCTCATGACCTaGGACATTCTCTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQHSLMT*DILSRC
Trigger: GCACCGAGAGAGAATGTCCCAGGTCATGAGAGAATG...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGCTGCTGTCTCTCGTTaGCTGCTTCCTGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEAAVSR*LLPVPK
Trigger: CTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGCATGGCTTCCACTCTaGCCATGTGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSAWLPL*PCVSPP
Trigger: TGGTGGAGACACACATGGCCAGAGTGGAAGCCATGC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTCTGAGCGGCTTTCTTaGGATCCACCATGCGCACAT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSSERLS*DPPCAH
Trigger: ATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATCTGAGCGGCTTTCTTaGGATCCACCATGCGCACAT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKESERLS*DPPCAH
Trigger: ATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCCGTTTCGGTCAAAGATaGCATGAGAGCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFRFGQR*HESIVS
Trigger: GGAAACGATGCTCTCATGCCATCTTTGACCGAAACG...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCGTTTCGGTCAAAGATaGCATGAGAGCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLRFGQR*HESIVS
Trigger: GGAAACGATGCTCTCATGCCATCTTTGACCGAAACG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTCTTCGTTTTCTGTGTTaGCTGGCACAGAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSLRFLC*LAQSQP
Trigger: GGGCTGACTCTGTGCCAGCCAACACAGAAAACGAAG...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTGTCAACCCAGAACCTaGTCGAGTGGTCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSCQPRT*SSGQSS
Trigger: CGAGGACTGACCACTCGACCAGGTTCTGGGTTGACA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATGTCAACCCAGAACCTaGTCGAGTGGTCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTACQPRT*SSGQSS
Trigger: CGAGGACTGACCACTCGACCAGGTTCTGGGTTGACA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGTGCATCTTGGACAGGTaGCGCTCCTCTGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKCILDR*RSSGVT
Trigger: TGTCACCCCAGAGGAGCGCCACCTGTCCAAGATGCA...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACTGCATCTTGGACAGGTaGCGCTCCTCTGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYCILDR*RSSGVT
Trigger: TGTCACCCCAGAGGAGCGCCACCTGTCCAAGATGCA...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAACGTTCTGCTGCATCTTaGACAGGTGGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKRSAAS*TGGAPL
Trigger: CAGAGGAGCGCCACCTGTCCAAGATGCAGCAGAACG...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTATAAATGGACACCGATaGGTAGTGAAGCAATGGTTT +
Preference number: 4 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAINGHR*VVKQWF
Trigger: AAACCATTGCTTCACTACCCATCGGTGTCCATTTAT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGTCATCTGCCCACCTTaGCCTCCCAAAATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEVICPP*PPKMLE
Trigger: TTCCAGCATTTTGGGAGGCCAAGGTGGGCAGATGAC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR TCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCTTCTACCACATTGGTaGTCTGCAGTTCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSLLPHW*SAVQGR
Trigger: TCTACCCTGAACTGCAGATCACCAATGTGGTAGAAG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCGGCAAGTTCTTTGCTTaGCGTTCTGCCTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSGKFFA*RSASSH
Trigger: ATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCC...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGGCAAGTTCTTTGCTTaGCGTTCTGCCTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEGKFFA*RSASSH
Trigger: ATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAAGCATATTGAACACGTaGCGAGGCCGAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTASILNT*RGRGGT
Trigger: TGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGGCCAAGACGTCATCTaGATAGTTTTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLGQDVI*IVLLFL
Trigger: CAGAAAGAGCAAAACTATTCAGATGACGTCTTGGCC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATCGGTCAAAGATGGCATaGGAGCATCGTTTCCGTAAC +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYRSKMA*EHRFRN
Trigger: GTTACGGAAACGATGCTCTCATGCCATCTTTGACCG...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGGGAGATCGTCCAGGCTaGACTCTCCATTCACGGGAA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWGDRPG*TLHSRE
Trigger: TTCCCGTGAATGGAGAGTTCAGCCTGGACGATCTCC...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAGGAGATCGTCCAGGCTaGACTCTCCATTCACGGGAA +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIGDRPG*TLHSRE
Trigger: TTCCCGTGAATGGAGAGTTCAGCCTGGACGATCTCC...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGAGATCTCCTCCGTCTTaGTATTTGTCAACCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLRSPPS*YLSTQN
Trigger: GTTCTGGGTTGACAAATATCAAGACGGAGGAGATCT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAACTCCCACGTTCACATaGAGCATCCCCCATCGATTC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTATPTFT*SIPHRF
Trigger: GAATCGATGGGGGATGCTTCATGTGAACGTGGGAGT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACTCCCACGTTCACATaGAGCATCCCCCATCGATTC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSTPTFT*SIPHRF
Trigger: GAATCGATGGGGGATGCTTCATGTGAACGTGGGAGT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTCTAATTGGTCCATTTaGATCTGGGGAAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSSNWSI*IWGRAG
Trigger: GCCAGCTCTTCCCCAGATTCAAATGGACCAATTAGA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440126.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCTGTGCATGTTCAGTCTaGCACAGAACATGGCAATCT +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFCACSV*HRTWQS
Trigger: AGATTGCCATGTTCTGTGGCAGACTGAACATGCACA...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATTCTGGACATTCATGTaGATGTTCAGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSFWTFM*MFSLPQ
Trigger: CTGTGGCAGACTGAACATGCACATGAATGTCCAGAA...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACTTCCTTGGTATCAATaGAGGTTTTGGTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSLPWYQ*RFWSLM
Trigger: CATCAGGGACCAAAACCTGCATTGATACCAAGGAAG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCCTTCCTTGGTATCAATaGAGGTTTTGGTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFLPWYQ*RFWSLM
Trigger: CATCAGGGACCAAAACCTGCATTGATACCAAGGAAG...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAACTTCTTGGCAATACTaGAGGATGCCTTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSTSWQY*RMPSLV
Trigger: TACCAAGGAAGGCATCCTGCAGTATTGCCAAGAAGT...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGACTTCTTGGCAATACTaGAGGATGCCTTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLTSWQY*RMPSLV
Trigger: TACCAAGGAAGGCATCCTGCAGTATTGCCAAGAAGT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGGTACTCTTCTCACTaGATGTCTCTTTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEWYSSH*MSLWRR
Trigger: CCGTCGCCAAAGAGACATGCAGTGAGAAGAGTACCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAACGCAGGGCAGCAACATaGCGTAGTCATGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKRRAAT*RSHASW
Trigger: CCAACTTGCATGACTACGGCATGTTGCTGCCCTGCG...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGCGCAGGGCAGCAACATaGCGTAGTCATGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWRRAAT*RSHASW
Trigger: CCAACTTGCATGACTACGGCATGTTGCTGCCCTGCG...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATGCATAGTCTGTGTCTaGTCCGCCCCACCAGACATC +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLICIVCV*SAPPDI
Trigger: GATGTCTGGTGGGGCGGAGCAGACACAGACTATGCA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATGTCTTCACTCCCATCTaGATAGTCTGTGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYVFTPI*IVCVCS
Trigger: GGAGCAGACACAGACTATGCAGATGGGAGTGAAGAC...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGTCTTCACTCCCATCTaGATAGTCTGTGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEVFTPI*IVCVCS
Trigger: GGAGCAGACACAGACTATGCAGATGGGAGTGAAGAC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACTGGTGGTGGTGGCAATaGTGGTGGTTCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYWWWWQ*WWFSLW
Trigger: CCACAGAGAGAACCACCAGCATTGCCACCACCACCA...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAATGGTGGTGGTGGCAATaGTGGTGGTTCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKWWWWQ*WWFSLW
Trigger: CCACAGAGAGAACCACCAGCATTGCCACCACCACCA...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATGGTGGTGGTGGCAATaGTGGTGGTTCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIWWWWQ*WWFSLW
Trigger: CCACAGAGAGAACCACCAGCATTGCCACCACCACCA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGCCACACACGGCCATaGAGTACTCTTCTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKECHTRP*STLLCQ
Trigger: TTGACACAGAAGAGTACTGCATGGCCGTGTGTGGCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCTTTGCTTGACGTTCTaGCTCTTCCCATTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLLCLTF*LFPFSH
Trigger: ATGAGAGAATGGGAAGAGGCAGAACGTCAAGCAAAG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACTTTGCTTGACGTTCTaGCTCTTCCCATTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSLCLTF*LFPFSH
Trigger: ATGAGAGAATGGGAAGAGGCAGAACGTCAAGCAAAG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTGAAATGCTGGATAACTaGCTTCTTATCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPEMLDN*LLISFR
Trigger: CCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTC...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCTGTCTCTCGTTGGCTaGTTCCTGTTCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSLSLVG*FLFQRF
Trigger: GAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACGCACATGCTCGAAATaGTTTAGGGTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKERTCSK*FRVCCL
Trigger: CAGACAGCACACCCTAAAGCATTTCGAGCATGTGCG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATCCACCATGCGCACATaGTCGAAATGCTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKESTMRT*SKCFRV
Trigger: CACCCTAAAGCATTTCGAGCATGTGCGCATGGTGGA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCTTGGGATCCACCATaGGCACATGCTCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSSWDPP*AHARNA
Trigger: AGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGA...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATTCTTGGGATCCACCATaGGCACATGCTCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYSWDPP*AHARNA
Trigger: AGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGA...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTCTTGGGATCCACCATaGGCACATGCTCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSSWDPP*AHARNA
Trigger: AGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATCTTGGGATCCACCATaGGCACATGCTCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKESWDPP*AHARNA
Trigger: AGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTCAGCCCCAAAAGAATaGCACGGCTGGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWSAPKE*HGWRSS
Trigger: GGACGATCTCCAGCCGTGGCATTCTTTTGGGGCTGA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAATCCAACTTCAGAGGCTaGTGTGGCGGGGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKSNFRG*CGGGLV
Trigger: AACTAGACCCCCGCCACAGCAGCCTCTGAAGTTGGA...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATCCAACTTCAGAGGCTaGTGTGGCGGGGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLISNFRG*CGGGLV
Trigger: AACTAGACCCCCGCCACAGCAGCCTCTGAAGTTGGA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGTCCAACTTCAGAGGCTaGTGTGGCGGGGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQSNFRG*CGGGLV
Trigger: AACTAGACCCCCGCCACAGCAGCCTCTGAAGTTGGA...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGCAGAACATGGCAATCTaGGGTTCAGCCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQQNMAI*GSASRP
Trigger: TGGCCTGCTGGCTGAACCCCAGATTGCCATGTTCTG...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGCAGAACATGGCAATCTaGGGTTCAGCCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWQNMAI*GSASRP
Trigger: TGGCCTGCTGGCTGAACCCCAGATTGCCATGTTCTG...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSVLDGH*LVGFYH
Trigger: GTGGTAGAAGCCAACCAACCAGTGACCATCCAGAAC...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEVLDGH*LVGFYH
Trigger: GTGGTAGAAGCCAACCAACCAGTGACCATCCAGAAC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATTGCACCAGTTCTGGATaGTCACTGGTTGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYCTSSG*SLVGWL
Trigger: AAGCCAACCAACCAGTGACCATCCAGAACTGGTGCA...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTGCACCAGTTCTGGATaGTCACTGGTTGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSCTSSG*SLVGWL
Trigger: AAGCCAACCAACCAGTGACCATCCAGAACTGGTGCA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGCACCAGTTCTGGATaGTCACTGGTTGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKECTSSG*SLVGWL
Trigger: AAGCCAACCAACCAGTGACCATCCAGAACTGGTGCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACGCTTGCACCAGTTCTaGATGGTCACTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTARLHQF*MVTGWL
Trigger: CAACCAACCAGTGACCATCCAGAACTGGTGCAAGCG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGATCACAAAGTGGGGATaGGTCTTGCACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLITKWG*VLHCLR
Trigger: CCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGAT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAATCACAAAGTGGGGATaGGTCTTGCACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAITKWG*VLHCLR
Trigger: CCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGAT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGCACTGCATGTCTCTTTaGCGACGGTGTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLHCMSL*RRCASE
Trigger: TTCACTGGCACACCGTCGCCAAAGAGACATGCAGTG...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCCACTGCATGTCTCTTTaGCGACGGTGTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSHCMSL*RRCASE
Trigger: TTCACTGGCACACCGTCGCCAAAGAGACATGCAGTG...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGGTGGTTCTCTCTGTaGCTTCTTCGTAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEWWFSL*LLRRVP
Trigger: AGGAACCCTACGAAGAAGCCACAGAGAGAACCACCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGGTGGCAATGCTGGTaGTTCTCTCTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEWWQCW*FSLWLL
Trigger: AAGAAGCCACAGAGAGAACCACCAGCATTGCCACCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCTGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIWWWQC*WFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCA...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAWWWQC*WFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTCCGCCGTAAAAGAATaGGGCACACTTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSSAVKE*GTLPFS
Trigger: ACTGAAGGGAAGTGTGCCCCATTCTTTTACGGCGGA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATCCGCCGTAAAAGAATaGGGCACACTTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKESAVKE*GTLPFS
Trigger: ACTGAAGGGAAGTGTGCCCCATTCTTTTACGGCGGA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGTAAACTTTGGGACATaGCGCTGCCACACACGGCCA +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKVNFGT*RCHTRP
Trigger: TGGCCGTGTGTGGCAGCGCCATGTCCCAAAGTTTAC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346798.8
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGTCTTGAGTAAACTTTaGGACATGGCGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSVLSKL*DMALPH
Trigger: GTGTGGCAGCGCCATGTCCCAAAGTTTACTCAAGAC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000439274.6
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCCTCAAGCCTCTCTTTaGCTTTCTGGAAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSPQASL*LSGNGH
Trigger: ATGCCCATTTCCAGAAAGCCAAAGAGAGGCTTGAGG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTCTCTCTCGGTGCTTaGCCTCAAGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLFSLGA*PQASLW
Trigger: CCAAAGAGAGGCTTGAGGCCAAGCACCGAGAGAGAA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATTCTCTCTCGGTGCTTaGCCTCAAGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAFSLGA*PQASLW
Trigger: CCAAAGAGAGGCTTGAGGCCAAGCACCGAGAGAGAA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTTCTCTCTCGGTGCTTaGCCTCAAGCCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSFSLGA*PQASLW
Trigger: CCAAAGAGAGGCTTGAGGCCAAGCACCGAGAGAGAA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACATTCTCTCATGACCTaGGACATTCTCTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEHSLMT*DILSRC
Trigger: GCACCGAGAGAGAATGTCCCAGGTCATGAGAGAATG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAGCATGGCTTCCACTCTaGCCATGTGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIAWLPL*PCVSPP
Trigger: TGGTGGAGACACACATGGCCAGAGTGGAAGCCATGC...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGGCATGGCTTCCACTCTaGCCATGTGTGTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQAWLPL*PCVSPP
Trigger: TGGTGGAGACACACATGGCCAGAGTGGAAGCCATGC...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCGTTTCGGTCAAAGATaGCATGAGAGCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSRFGQR*HESIVS
Trigger: GGAAACGATGCTCTCATGCCATCTTTGACCGAAACG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATGAAGGAGCTCCACGGTaGTTTTCGTTTCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYEGAPR*FSFRSK
Trigger: CTTTGACCGAAACGAAAACCACCGTGGAGCTCCTTC...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGCTTCGTTTTCTGTGTTaGCTGGCACAGAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLLRFLC*LAQSQP
Trigger: GGGCTGACTCTGTGCCAGCCAACACAGAAAACGAAG...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCCTTCGTTTTCTGTGTTaGCTGGCACAGAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSLRFLC*LAQSQP
Trigger: GGGCTGACTCTGTGCCAGCCAACACAGAAAACGAAG...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTGTCAACCCAGAACCTaGTCGAGTGGTCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWCQPRT*SSGQSS
Trigger: CGAGGACTGACCACTCGACCAGGTTCTGGGTTGACA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAATGTCAACCCAGAACCTaGTCGAGTGGTCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKCQPRT*SSGQSS
Trigger: CGAGGACTGACCACTCGACCAGGTTCTGGGTTGACA...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATGTCAACCCAGAACCTaGTCGAGTGGTCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLICQPRT*SSGQSS
Trigger: CGAGGACTGACCACTCGACCAGGTTCTGGGTTGACA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTCCACACCATGATGAATaGATGTGTACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPPHHDE*MCTVSS
Trigger: AGAAGAAACAGTACACATCCATTCATCATGGTGTGG...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTAAAGAACTTGTAGGTTaGATTTTCGTAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPKELVG*IFVAVL
Trigger: CAGAACGGCTACGAAAATCCAACCTACAAGTTCTTT...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACTGGTCTTGAACTTCTaGGCTCAAGTCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKELVLNF*AQVICP
Trigger: TGGGCAGATGACTTGAGCCCAGAAGTTCAAGACCAG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR TCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTCTTCTACCACATTGGTaGTCTGCAGTTCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSLLPHW*SAVQGR
Trigger: TCTACCCTGAACTGCAGATCACCAATGTGGTAGAAG...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGGCAAGTTCTTTGCTTaGCGTTCTGCCTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSGKFFA*RSASSH
Trigger: ATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGCATATTGAACACGTaGCGAGGCCGAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKSILNT*RGRGGT
Trigger: TGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCT...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGAGCATATTGAACACGTaGCGAGGCCGAGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQSILNT*RGRGGT
Trigger: TGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCT...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTACTTCTTTAGCATATTaGACACGTGACGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSTSLAY*TRDEAE
Trigger: CTCGGCCTCGTCACGTGTTCAATATGCTAAAGAAGT...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAACTTCTTTAGCATATTaGACACGTGACGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKETSLAY*TRDEAE
Trigger: CTCGGCCTCGTCACGTGTTCAATATGCTAAAGAAGT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATCATCAACTTCATCCTaGATCTCCTCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTASSTSS*ISSATA
Trigger: TGCAGTGGCCGAGGAGATTCAGGATGAAGTTGATGA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTCATCAACTTCATCCTaGATCTCCTCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSSSTSS*ISSATA
Trigger: TGCAGTGGCCGAGGAGATTCAGGATGAAGTTGATGA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGCGGTCAAAGATGGCATaGGAGCATCGTTTCCGTAAC +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLRSKMA*EHRFRN
Trigger: GTTACGGAAACGATGCTCTCATGCCATCTTTGACCG...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAAGATCTCCTCCGTCTTaGTATTTGTCAACCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQRSPPS*YLSTQN
Trigger: GTTCTGGGTTGACAAATATCAAGACGGAGGAGATCT...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAGATCTCCTCCGTCTTaGTATTTGTCAACCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSRSPPS*YLSTQN
Trigger: GTTCTGGGTTGACAAATATCAAGACGGAGGAGATCT...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCATGAACTTCATATCCTaGGTCATGTCGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFMNFIS*VMSEFC
Trigger: GCAGAATTCCGACATGACTCAGGATATGAAGTTCAT...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGATTGCACCTTTGTTTaGACCCACATCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSDCTFV*THIFCK
Trigger: TTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATC...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCCTGTGGAATACTCCCTaGGATCAACAAACTGTTAAC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFLWNTP*DQQTVN
Trigger: GTTAACAGTTTGTTGATCTCAGGGAGTATTCCACAG...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440126.7
CDS-3UTR GCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTGGTACTCTTCTCACTaGATGTCTCTTTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLWYSSH*MSLWRR
Trigger: CCGTCGCCAAAGAGACATGCAGTGAGAAGAGTACCA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTGGTACTCTTCTCACTaGATGTCTCTTTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSWYSSH*MSLWRR
Trigger: CCGTCGCCAAAGAGACATGCAGTGAGAAGAGTACCA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCGTCTTCACTCCCATCTaGATAGTCTGTGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIVFTPI*IVCVCS
Trigger: GGAGCAGACACAGACTATGCAGATGGGAGTGAAGAC...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGCAAAGTTGTTCCGGTTaGCGCCACATCCGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQQSCSG*RHIRRK
Trigger: TTTACGGCGGATGTGGCGGCAACCGGAACAACTTTG...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGACATTCTCTCTCGGTaGTTGGCCTCAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKDILSR*LASSLS
Trigger: AGAGAGGCTTGAGGCCAAGCACCGAGAGAGAATGTC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTTTAGGCAAGTTCTTTaGTTGACGTTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLFRQVL*LTFCLF
Trigger: GAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACTGTCTCTCGTTGGCTaGTTCCTGTTCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKELSLVG*FLFQRF
Trigger: GAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCCGCACATGCTCGAAATaGTTTAGGGTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSRTCSK*FRVCCL
Trigger: CAGACAGCACACCCTAAAGCATTTCGAGCATGTGCG...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCCGCACATGCTCGAAATaGTTTAGGGTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIRTCSK*FRVCCL
Trigger: CAGACAGCACACCCTAAAGCATTTCGAGCATGTGCG...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACGCACATGCTCGAAATaGTTTAGGGTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTARTCSK*FRVCCL
Trigger: CAGACAGCACACCCTAAAGCATTTCGAGCATGTGCG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAAGAGAGACTGATTCATaGGCTCATAAATCACACGGA +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSRETDS*AHKSHG
Trigger: TCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCT...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGAGAGAGACTGATTCATaGGCTCATAAATCACACGGA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLRETDS*AHKSHG
Trigger: TCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAATCAGGGGTACTGGCTaGTGTTGTAGGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAIRGTG*CCRNSN
Trigger: GTTCGAGTTCCTACAACAGCAGCCAGTACCCCTGAT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348990.9
ENST00000354192.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGATCAGGGGTACTGGCTaGTGTTGTAGGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLIRGTG*CCRNSN
Trigger: GTTCGAGTTCCTACAACAGCAGCCAGTACCCCTGAT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348990.9
ENST00000354192.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAATCAGGGGTACTGGCTaGTGTTGTAGGAATGGCGCT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIIRGTG*CCRNGA
Trigger: AGCGCCATTCCTACAACAGCAGCCAGTACCCCTGAT...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357903.7
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCAACAAACTGTTAACTaGAGTGACCACAACTTGACC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLQQTVN*SDHNLT
Trigger: GGTCAAGTTGTGGTCACTGCAGTTAACAGTTTGTTG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAGTCTGCCACAGAACATaGCAATCTGGGGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIVCHRT*QSGVQP
Trigger: TGGCTGAACCCCAGATTGCCATGTTCTGTGGCAGAC...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATGGATGGTCACTGGTTaGTTGGCTTCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEWMVTG*LASTTL
Trigger: CAATGTGGTAGAAGCCAACCAACCAGTGACCATCCA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSVLDGH*LVGFYH
Trigger: GTGGTAGAAGCCAACCAACCAGTGACCATCCAGAAC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLVLDGH*LVGFYH
Trigger: GTGGTAGAAGCCAACCAACCAGTGACCATCCAGAAC...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTGCACCAGTTCTGGATaGTCACTGGTTGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSCTSSG*SLVGWL
Trigger: AAGCCAACCAACCAGTGACCATCCAGAACTGGTGCA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAATCACAAAGTGGGGATaGGTCTTGCACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIITKWG*VLHCLR
Trigger: CCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGAT...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGATCACAAAGTGGGGATaGGTCTTGCACTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQITKWG*VLHCLR
Trigger: CCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGAT...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAACACTGCATGTCTCTTTaGCGACGGTGTGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKHCMSL*RRCASE
Trigger: TTCACTGGCACACCGTCGCCAAAGAGACATGCAGTG...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAACGTAGTCATGCAAGTTaGTACTCTTCTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQRSHAS*YSSHCM
Trigger: CATGCAGTGAGAAGAGTACCAACTTGCATGACTACG...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCGTAGTCATGCAAGTTaGTACTCTTCTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSRSHAS*YSSHCM
Trigger: CATGCAGTGAGAAGAGTACCAACTTGCATGACTACG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTGGTGGTTCTCTCTGTaGCTTCTTCGTAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSWWFSL*LLRRVP
Trigger: AGGAACCCTACGAAGAAGCCACAGAGAGAACCACCA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTGGTGGTTCTCTCTGTaGCTTCTTCGTAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLWWFSL*LLRRVP
Trigger: AGGAACCCTACGAAGAAGCCACAGAGAGAACCACCA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATGGTGGTTCTCTCTGTaGCTTCTTCGTAGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAWWFSL*LLRRVP
Trigger: AGGAACCCTACGAAGAAGCCACAGAGAGAACCACCA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCTGGTGGCAATGCTGGTaGTTCTCTCTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIWWQCW*FSLWLL
Trigger: AAGAAGCCACAGAGAGAACCACCAGCATTGCCACCA...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGTGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKWWWQC*WFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCA...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIWWWQC*WFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGTGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQWWWQC*WFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCA...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTCCGCCGTAAAAGAATaGGGCACACTTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLSAVKE*GTLPFS
Trigger: ACTGAAGGGAAGTGTGCCCCATTCTTTTACGGCGGA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000357903.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGTCTTGAGTAAACTTTaGGACATGGCGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAVLSKL*DMALPH
Trigger: GTGTGGCAGCGCCATGTCCCAAAGTTTACTCAAGAC...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000439274.6
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGCTCTCTTTGGCTTTCTaGAAATGGGCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLLSLAF*KWACSF
Trigger: GAATGAACATGCCCATTTCCAGAAAGCCAAAGAGAG...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTCCTCAAGCCTCTCTTTaGCTTTCTGGAAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSPQASL*LSGNGH
Trigger: ATGCCCATTTCCAGAAAGCCAAAGAGAGGCTTGAGG...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACCTCAAGCCTCTCTTTaGCTTTCTGGAAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEPQASL*LSGNGH
Trigger: ATGCCCATTTCCAGAAAGCCAAAGAGAGGCTTGAGG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACATTCTCTCATGACCTaGGACATTCTCTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAHSLMT*DILSRC
Trigger: GCACCGAGAGAGAATGTCCCAGGTCATGAGAGAATG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGCTGCTGTCTCTCGTTaGCTGCTTCCTGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKAAVSR*LLPVPK
Trigger: CTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCTCCGTAACTGATCCTTaGTTCACTAATCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFSVTDP*FTNHVG
Trigger: GCCAACATGATTAGTGAACCAAGGATCAGTTACGGA...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCGAAGGAGCTCCACGGTaGTTTTCGTTTCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIEGAPR*FSFRSK
Trigger: CTTTGACCGAAACGAAAACCACCGTGGAGCTCCTTC...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGTTTTCTGTGTTGGCTaGCACAGAGTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAVFCVG*HRVSPK
Trigger: TTTGGGGCTGACTCTGTGCCAGCCAACACAGAAAAC...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGGCAAGTTCTTTGCTTaGCGTTCTGCCTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKGKFFA*RSASSH
Trigger: ATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAGGCAAGTTCTTTGCTTaGCGTTCTGCCTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIGKFFA*RSASSH
Trigger: ATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCC...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGGGCAAGTTCTTTGCTTaGCGTTCTGCCTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQGKFFA*RSASSH
Trigger: ATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCC...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACTTCTTTAGCATATTaGACACGTGACGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSTSLAY*TRDEAE
Trigger: CTCGGCCTCGTCACGTGTTCAATATGCTAAAGAAGT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGACTTCTTTAGCATATTaGACACGTGACGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLTSLAY*TRDEAE
Trigger: CTCGGCCTCGTCACGTGTTCAATATGCTAAAGAAGT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTCATCAACTTCATCCTaGATCTCCTCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWSSTSS*ISSATA
Trigger: TGCAGTGGCCGAGGAGATTCAGGATGAAGTTGATGA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGTCATCAACTTCATCCTaGATCTCCTCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKSSTSS*ISSATA
Trigger: TGCAGTGGCCGAGGAGATTCAGGATGAAGTTGATGA...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGTCATCAACTTCATCCTaGATCTCCTCGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQSSTSS*ISSATA
Trigger: TGCAGTGGCCGAGGAGATTCAGGATGAAGTTGATGA...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGGCCAAGACGTCATCTaGATAGTTTTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSGQDVI*IVLLFL
Trigger: CAGAAAGAGCAAAACTATTCAGATGACGTCTTGGCC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATGGCCAAGACGTCATCTaGATAGTTTTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYGQDVI*IVLLFL
Trigger: CAGAAAGAGCAAAACTATTCAGATGACGTCTTGGCC...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACCGGTCAAAGATGGCATaGGAGCATCGTTTCCGTAAC +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYRSKMA*EHRFRN
Trigger: GTTACGGAAACGATGCTCTCATGCCATCTTTGACCG...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGCGGTCAAAGATGGCATaGGAGCATCGTTTCCGTAAC +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWRSKMA*EHRFRN
Trigger: GTTACGGAAACGATGCTCTCATGCCATCTTTGACCG...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACGGTCAAAGATGGCATaGGAGCATCGTTTCCGTAAC +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIRSKMA*EHRFRN
Trigger: GTTACGGAAACGATGCTCTCATGCCATCTTTGACCG...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCATGAACTTCATATCCTaGGTCATGTCGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSMNFIS*VMSEFC
Trigger: GCAGAATTCCGACATGACTCAGGATATGAAGTTCAT...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCGATTGCACCTTTGTTTaGACCCACATCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSDCTFV*THIFCK
Trigger: TTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATC...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATCTTCCTTGGTATCAATaGAGGTTTTGGTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYLPWYQ*RFWSLM
Trigger: CATCAGGGACCAAAACCTGCATTGATACCAAGGAAG...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGGCAATACTGCAGGATaGCTTCCTTGGTATCAATGC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSGNTAG*LPWYQC
Trigger: GCATTGATACCAAGGAAGGCATCCTGCAGTATTGCC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTGGTACTCTTCTCACTaGATGTCTCTTTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWWYSSH*MSLWRR
Trigger: CCGTCGCCAAAGAGACATGCAGTGAGAAGAGTACCA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGTCTTCACTCCCATCTaGATAGTCTGTGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKVFTPI*IVCVCS
Trigger: GGAGCAGACACAGACTATGCAGATGGGAGTGAAGAC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTGCCACACACGGCCATaGAGTACTCTTCTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWCHTRP*STLLCQ
Trigger: TTGACACAGAAGAGTACTGCATGGCCGTGTGTGGCA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000357903.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACTGCCACACACGGCCATaGAGTACTCTTCTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYCHTRP*STLLCQ
Trigger: TTGACACAGAAGAGTACTGCATGGCCGTGTGTGGCA...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACTTTGCTTGACGTTCTaGCTCTTCCCATTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKELCLTF*LFPFSH
Trigger: ATGAGAGAATGGGAAGAGGCAGAACGTCAAGCAAAG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTTTAGGCAAGTTCTTTaGTTGACGTTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSFRQVL*LTFCLF
Trigger: GAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCGAAATGCTGGATAACTaGCTTCTTATCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFEMLDN*LLISFR
Trigger: CCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTC...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGGAAATGCTGGATAACTaGCTTCTTATCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLEMLDN*LLISFR
Trigger: CCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTC...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACTTTCTCCTGGAAATaGTGGATAACTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFTFSWK*WITAFL
Trigger: TAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGT...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCCTGTCTCTCGTTGGCTaGTTCCTGTTCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSLSLVG*FLFQRF
Trigger: GAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAG...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAAAATGCTTTAGGGTGTaGTGTCTGTCCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQKCFRV*CLSFCS
Trigger: AGAACAGAAGGACAGACAGCACACCCTAAAGCATTT...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAATCTTGGGATCCACCATaGGCACATGCTCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKSWDPP*AHARNA
Trigger: AGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGA...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGTCTTGGGATCCACCATaGGCACATGCTCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQSWDPP*AHARNA
Trigger: AGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGA...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATCTTGGGATCCACCATaGGCACATGCTCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLISWDPP*AHARNA
Trigger: AGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCGTCATGTCGGAATTCTaGATCCATCTTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSVMSEF*IHLHFR
Trigger: TCTGAAGTGAAGATGGATGCAGAATTCCGACATGAC...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGATCAGGGGTACTGGCTaGTGTTGTAGGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQIRGTG*CCRNSN
Trigger: GTTCGAGTTCCTACAACAGCAGCCAGTACCCCTGAT...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348990.9
ENST00000354192.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCTATCAATGCAGGTTTTaGTCCCTGATGGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFYQCRF*SLMDLN
Trigger: ATTCAGATCCATCAGGGACCAAAACCTGCATTGATA...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTGGATGGTCACTGGTTaGTTGGCTTCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLWMVTG*LASTTL
Trigger: CAATGTGGTAGAAGCCAACCAACCAGTGACCATCCA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWVLDGH*LVGFYH
Trigger: GTGGTAGAAGCCAACCAACCAGTGACCATCCAGAAC...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAATGCACCAGTTCTGGATaGTCACTGGTTGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKCTSSG*SLVGWL
Trigger: AAGCCAACCAACCAGTGACCATCCAGAACTGGTGCA...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAACATCCATCCTCTCCTaGTGTAAGAATTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQTSILS*CKNLHL
Trigger: CAAGTGCAAATTCTTACACCAGGAGAGGATGGATGT...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCACATCCATCCTCTCCTaGTGTAAGAATTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSTSILS*CKNLHL
Trigger: CAAGTGCAAATTCTTACACCAGGAGAGGATGGATGT...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACGTAGTCATGCAAGTTaGTACTCTTCTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKERSHAS*YSSHCM
Trigger: CATGCAGTGAGAAGAGTACCAACTTGCATGACTACG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATGGTGGCAATGCTGGTaGTTCTCTCTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIWWQCW*FSLWLL
Trigger: AAGAAGCCACAGAGAGAACCACCAGCATTGCCACCA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGTGGTGGCAATGCTGGTaGTTCTCTCTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKWWQCW*FSLWLL
Trigger: AAGAAGCCACAGAGAGAACCACCAGCATTGCCACCA...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTGGTGGCAATGCTGGTaGTTCTCTCTGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWWWQCW*FSLWLL
Trigger: AAGAAGCCACAGAGAGAACCACCAGCATTGCCACCA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGTCCGCCGTAAAAGAATaGGGCACACTTCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQSAVKE*GTLPFS
Trigger: ACTGAAGGGAAGTGTGCCCCATTCTTTTACGGCGGA...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACGGGCAAGAGGTTCCTaGGTAGTCTTGAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTARARGS*VVLSKL
Trigger: AAGTTTACTCAAGACTACCCAGGAACCTCTTGCCCG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000439274.6
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCCCTCAAGCCTCTCTTTaGCTTTCTGGAAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSPQASL*LSGNGH
Trigger: ATGCCCATTTCCAGAAAGCCAAAGAGAGGCTTGAGG...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACCTCAAGCCTCTCTTTaGCTTTCTGGAAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAPQASL*LSGNGH
Trigger: ATGCCCATTTCCAGAAAGCCAAAGAGAGGCTTGAGG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTTCTCCTGGAAATGCTaGATAACTGCCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLFSWKC*ITAFLS
Trigger: TGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTCCGTAACTGATCCTTaGTTCACTAATCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSSVTDP*FTNHVG
Trigger: GCCAACATGATTAGTGAACCAAGGATCAGTTACGGA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACGTTTCGGTCAAAGATaGCATGAGAGCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTARFGQR*HESIVS
Trigger: GGAAACGATGCTCTCATGCCATCTTTGACCGAAACG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACGAAGGAGCTCCACGGTaGTTTTCGTTTCGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYEGAPR*FSFRSK
Trigger: CTTTGACCGAAACGAAAACCACCGTGGAGCTCCTTC...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACGTTTTCTGTGTTGGCTaGCACAGAGTCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYVFCVG*HRVSPK
Trigger: TTTGGGGCTGACTCTGTGCCAGCCAACACAGAAAAC...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCACCACACCATGATGAATaGATGTGTACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSPHHDE*MCTVSS
Trigger: AGAAGAAACAGTACACATCCATTCATCATGGTGTGG...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCCCACACCATGATGAATaGATGTGTACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FYKWTPMGSEAMVLLSNFPHHDE*MCTVSS
Trigger: AGAAGAAACAGTACACATCCATTCATCATGGTGTGG...GAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAAAAGAACTTGTAGGTTaGATTTTCGTAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: SINGHRWVVKQWFCCPTSKELVG*IFVAVL
Trigger: CAGAACGGCTACGAAAATCCAACCTACAAGTTCTTT...TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGAAAGAACTTGTAGGTTaGATTTTCGTAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLKELVG*IFVAVL
Trigger: CAGAACGGCTACGAAAATCCAACCTACAAGTTCTTT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGATAAATGGACACCGATaGGTAGTGAAGCAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLINGHR*VVKQWF
Trigger: AAACCATTGCTTCACTACCCATCGGTGTCCATTTAT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAACTTCTACCACATTGGTaGTCTGCAGTTCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKLLPHW*SAVQGR
Trigger: TCTACCCTGAACTGCAGATCACCAATGTGGTAGAAG...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGCTTCTACCACATTGGTaGTCTGCAGTTCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQLLPHW*SAVQGR
Trigger: TCTACCCTGAACTGCAGATCACCAATGTGGTAGAAG...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACACTTCTTTAGCATATTaGACACGTGACGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYTSLAY*TRDEAE
Trigger: CTCGGCCTCGTCACGTGTTCAATATGCTAAAGAAGT...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGGCCAAGACGTCATCTaGATAGTTTTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSGQDVI*IVLLFL
Trigger: CAGAAAGAGCAAAACTATTCAGATGACGTCTTGGCC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGGCCAAGACGTCATCTaGATAGTTTTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAGQDVI*IVLLFL
Trigger: CAGAAAGAGCAAAACTATTCAGATGACGTCTTGGCC...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCAGATCTCCTCCGTCTTaGTATTTGTCAACCCAGAAC +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIRSPPS*YLSTQN
Trigger: GTTCTGGGTTGACAAATATCAAGACGGAGGAGATCT...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTGATTGCACCTTTGTTTaGACCCACATCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSDCTFV*THIFCK
Trigger: TTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATC...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATTCTGGACATTCATGTaGATGTTCAGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAFWTFM*MFSLPQ
Trigger: CTGTGGCAGACTGAACATGCACATGAATGTCCAGAA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAGGCAATACTGCAGGATaGCTTCCTTGGTATCAATGC +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKGNTAG*LPWYQC
Trigger: GCATTGATACCAAGGAAGGCATCCTGCAGTATTGCC...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATCAGGGGTACTGGCTaGTGTTGTAGGAAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSIRGTG*CCRKFN
Trigger: GTTAAACTTCCTACAACAGCAGCCAGTACCCCTGAT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000439274.6
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTTTAGGCAAGTTCTTTaGTTGACGTTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSFRQVL*LTFCLF
Trigger: GAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAA...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATTTAGGCAAGTTCTTTaGTTGACGTTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEFRQVL*LTFCLF
Trigger: GAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAACTTTCTCCTGGAAATaGTGGATAACTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQTFSWK*WITAFL
Trigger: TAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGT...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACCTGTCTCTCGTTGGCTaGTTCCTGTTCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYLSLVG*FLFQRF
Trigger: GAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAG...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGCTGTCTCTCGTTGGCTaGTTCCTGTTCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWLSLVG*FLFQRF
Trigger: GAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAG...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATAAATGCTTTAGGGTGTaGTGTCTGTCCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYKCFRV*CLSFCS
Trigger: AGAACAGAAGGACAGACAGCACACCCTAAAGCATTT...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAAAATGCTTTAGGGTGTaGTGTCTGTCCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEKCFRV*CLSFCS
Trigger: AGAACAGAAGGACAGACAGCACACCCTAAAGCATTT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCAGAGAGACTGATTCATaGGCTCATAAATCACACGGA +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSRETDS*AHKSHG
Trigger: TCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCT...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTAGAGAGACTGATTCATaGGCTCATAAATCACACGGA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSRETDS*AHKSHG
Trigger: TCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCT...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAAGAGAGACTGATTCATaGGCTCATAAATCACACGGA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKERETDS*AHKSHG
Trigger: TCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTGGATGGTCACTGGTTaGTTGGCTTCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWWMVTG*LASTTL
Trigger: CAATGTGGTAGAAGCCAACCAACCAGTGACCATCCA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATACATCCATCCTCTCCTaGTGTAAGAATTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYTSILS*CKNLHL
Trigger: CAAGTGCAAATTCTTACACCAGGAGAGGATGGATGT...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAACATCCATCCTCTCCTaGTGTAAGAATTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKETSILS*CKNLHL
Trigger: CAAGTGCAAATTCTTACACCAGGAGAGGATGGATGT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCCGTAGTCATGCAAGTTaGTACTCTTCTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSRSHAS*YSSHCM
Trigger: CATGCAGTGAGAAGAGTACCAACTTGCATGACTACG...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACGTAGTCATGCAAGTTaGTACTCTTCTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTARSHAS*YSSHCM
Trigger: CATGCAGTGAGAAGAGTACCAACTTGCATGACTACG...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACGGGCAAGAGGTTCCTaGGTAGTCTTGAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIRARGS*VVLSKL
Trigger: AAGTTTACTCAAGACTACCCAGGAACCTCTTGCCCG...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000439274.6
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAACTCTCTTTGGCTTTCTaGAAATGGGCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKELSLAF*KWACSF
Trigger: GAATGAACATGCCCATTTCCAGAAAGCCAAAGAGAG...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGCCTCAAGCCTCTCTTTaGCTTTCTGGAAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWPQASL*LSGNGH
Trigger: ATGCCCATTTCCAGAAAGCCAAAGAGAGGCTTGAGG...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCTTCTCCTGGAAATGCTaGATAACTGCCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSFSWKC*ITAFLS
Trigger: TGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAA...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCCGTAACTGATCCTTaGTTCACTAATCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSSVTDP*FTNHVG
Trigger: GCCAACATGATTAGTGAACCAAGGATCAGTTACGGA...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACCGTTTCGGTCAAAGATaGCATGAGAGCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYRFGQR*HESIVS
Trigger: GGAAACGATGCTCTCATGCCATCTTTGACCGAAACG...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACGTTTCGGTCAAAGATaGCATGAGAGCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIRFGQR*HESIVS
Trigger: GGAAACGATGCTCTCATGCCATCTTTGACCGAAACG...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGCGTTTCGGTCAAAGATaGCATGAGAGCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWRFGQR*HESIVS
Trigger: GGAAACGATGCTCTCATGCCATCTTTGACCGAAACG...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCCCACACCATGATGAATaGATGTGTACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSPHHDE*MCTVSS
Trigger: AGAAGAAACAGTACACATCCATTCATCATGGTGTGG...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGGGCCAAGACGTCATCTaGATAGTTTTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWGQDVI*IVLLFL
Trigger: CAGAAAGAGCAAAACTATTCAGATGACGTCTTGGCC...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGAGATCTCCTCCGTCTTaGTATTTGTCAACCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKRSPPS*YLSTQN
Trigger: GTTCTGGGTTGACAAATATCAAGACGGAGGAGATCT...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAAGATCTCCTCCGTCTTaGTATTTGTCAACCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIRSPPS*YLSTQN
Trigger: GTTCTGGGTTGACAAATATCAAGACGGAGGAGATCT...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAATGAACTTCATATCCTaGGTCATGTCGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAMNFIS*VMSEFC
Trigger: GCAGAATTCCGACATGACTCAGGATATGAAGTTCAT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGATTGCACCTTTGTTTaGACCCACATCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSDCTFV*THIFCK
Trigger: TTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGTGTGCATGTTCAGTCTaGCACAGAACATGGCAATCT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKCACSV*HRTWQS
Trigger: AGATTGCCATGTTCTGTGGCAGACTGAACATGCACA...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATGTGCATGTTCAGTCTaGCACAGAACATGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLICACSV*HRTWQS
Trigger: AGATTGCCATGTTCTGTGGCAGACTGAACATGCACA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGTGTGCATGTTCAGTCTaGCACAGAACATGGCAATCT +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQCACSV*HRTWQS
Trigger: AGATTGCCATGTTCTGTGGCAGACTGAACATGCACA...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGTTCTGGACATTCATGTaGATGTTCAGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQFWTFM*MFSLPQ
Trigger: CTGTGGCAGACTGAACATGCACATGAATGTCCAGAA...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGTTCTGGACATTCATGTaGATGTTCAGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKFWTFM*MFSLPQ
Trigger: CTGTGGCAGACTGAACATGCACATGAATGTCCAGAA...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATATTCTGGACATTCATGTaGATGTTCAGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIFWTFM*MFSLPQ
Trigger: CTGTGGCAGACTGAACATGCACATGAATGTCCAGAA...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACTTCCTTGGTATCAATaGAGGTTTTGGTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLILPWYQ*RFWSLM
Trigger: CATCAGGGACCAAAACCTGCATTGATACCAAGGAAG...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACACTTCTTGGCAATACTaGAGGATGCCTTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYTSWQY*RMPSLV
Trigger: TACCAAGGAAGGCATCCTGCAGTATTGCCAAGAAGT...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAATCAGGGGTACTGGCTaGTGTTGTAGGAAGTTTAAC +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIIRGTG*CCRKFN
Trigger: GTTAAACTTCCTACAACAGCAGCCAGTACCCCTGAT...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000439274.6
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGCTTTGCTTGACGTTCTaGCTCTTCCCATTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWLCLTF*LFPFSH
Trigger: ATGAGAGAATGGGAAGAGGCAGAACGTCAAGCAAAG...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAACTTTGCTTGACGTTCTaGCTCTTCCCATTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKLCLTF*LFPFSH
Trigger: ATGAGAGAATGGGAAGAGGCAGAACGTCAAGCAAAG...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTTTAGGCAAGTTCTTTaGTTGACGTTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSFRQVL*LTFCLF
Trigger: GAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAA...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCGAAATGCTGGATAACTaGCTTCTTATCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSEMLDN*LLISFR
Trigger: CCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTC...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAGAAATGCTGGATAACTaGCTTCTTATCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEEMLDN*LLISFR
Trigger: CCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTC...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATACTTTCTCCTGGAAATaGTGGATAACTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYTFSWK*WITAFL
Trigger: TAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGT...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCACTTTCTCCTGGAAATaGTGGATAACTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSTFSWK*WITAFL
Trigger: TAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGT...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTACTTTCTCCTGGAAATaGTGGATAACTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSTFSWK*WITAFL
Trigger: TAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGT...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAACTTTCTCCTGGAAATaGTGGATAACTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKETFSWK*WITAFL
Trigger: TAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAAAATGCTTTAGGGTGTaGTGTCTGTCCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAKCFRV*CLSFCS
Trigger: AGAACAGAAGGACAGACAGCACACCCTAAAGCATTT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCAGAGAGACTGATTCATaGGCTCATAAATCACACGGA +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYIRETDS*AHKSHG
Trigger: TCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCT...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGTCATGTCGGAATTCTaGATCCATCTTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSVMSEF*IHLHFR
Trigger: TCTGAAGTGAAGATGGATGCAGAATTCCGACATGAC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGTCATGTCGGAATTCTaGATCCATCTTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAVMSEF*IHLHFR
Trigger: TCTGAAGTGAAGATGGATGCAGAATTCCGACATGAC...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGTGAAGCAATGGTTTTaGTGTCCAACTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKVKQWF*CPTSEA
Trigger: AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCAC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAGCTTGAAGTCTCAATaGCTAATGTGTGCACATAAA +
Preference number: 4 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSSLKSQ*LMCAHK
Trigger: TTTATGTGCACACATTAGGCATTGAGACTTCAAGCT...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATTATCAATGCAGGTTTTaGTCCCTGATGGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYYQCRF*SLMDLN
Trigger: ATTCAGATCCATCAGGGACCAAAACCTGCATTGATA...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTATCAATGCAGGTTTTaGTCCCTGATGGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSYQCRF*SLMDLN
Trigger: ATTCAGATCCATCAGGGACCAAAACCTGCATTGATA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
ENST00000440126.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGACATCCATCCTCTCCTaGTGTAAGAATTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLTSILS*CKNLHL
Trigger: CAAGTGCAAATTCTTACACCAGGAGAGGATGGATGT...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACCGTAGTCATGCAAGTTaGTACTCTTCTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYRSHAS*YSSHCM
Trigger: CATGCAGTGAGAAGAGTACCAACTTGCATGACTACG...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CACATAAAACAGGCACGAAGAAACAAACGTGTGTATCCTCTTAATTCCTATATCCTCTCTTTGGCTTTCTaGAAATGGGCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: HIKQARRNKRVYPLNSYILSLAF*KWACSF
Trigger: GAATGAACATGCCCATTTCCAGAAAGCCAAAGAGAG...GATATAGGAATTAAGAGGATACACACGTTTGTTTCTTCGTGCCTGTTTTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTCTCCTGGAAATGCTaGATAACTGCCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSFSWKC*ITAFLS
Trigger: TGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAA...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTTCTCCTGGAAATGCTaGATAACTGCCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSFSWKC*ITAFLS
Trigger: TGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAA...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAATTCTCCTGGAAATGCTaGATAACTGCCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEFSWKC*ITAFLS
Trigger: TGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAA...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTCCGTAACTGATCCTTaGTTCACTAATCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLSVTDP*FTNHVG
Trigger: GCCAACATGATTAGTGAACCAAGGATCAGTTACGGA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGTCTTGCCCGGGGTTATAAAGAACTTGTAGGTTaGATTTTCGTAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: RLFNVCSHPSKKSLARGYKELVG*IFVAVL
Trigger: CAGAACGGCTACGAAAATCCAACCTACAAGTTCTTT...ATAACCCCGGGCAAGACTTTTCTTTGAAGGATGACTACAGACATTAAATAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGAGAATAATATACAACTaGCTAAGGGGCTATGTGATA +
Preference number: 4 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLRIIYN*LRGYVI
Trigger: TATCACATAGCCCCTTAGCCAGTTGTATATTATTCT...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAATCTGGGGAAGAGCTaGCTCCAATCATTGTCAATT +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSNLGKS*LQSLSI
Trigger: AATTGACAATGATTGGAGCCAGCTCTTCCCCAGATT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440126.7
CDS-3UTR TCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGATTGCACCTTTGTTTaGACCCACATCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKDCTFV*THIFCK
Trigger: TTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAGATTGCACCTTTGTTTaGACCCACATCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKDCTFV*THIFCK
Trigger: TTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATC...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACGATTGCACCTTTGTTTaGACCCACATCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYDCTFV*THIFCK
Trigger: TTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATC...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp TTATACAAATTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATGTCATAAGCAATaGTTCTGTACAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: LYKLKTHLKRRVCPGMPSSCHKQ*FCTIIL
Trigger: CAGGATGATTGTACAGAATCATTGCTTATGACATGA...GGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAATTTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACTTTAGGCAAGTTCTTTaGTTGACGTTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYFRQVL*LTFCLF
Trigger: GAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAA...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGGAAATGCTGGATAACTaGCTTCTTATCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLEMLDN*LLISFR
Trigger: CCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTC...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACTTTCTCCTGGAAATaGTGGATAACTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSTFSWK*WITAFL
Trigger: TAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAAAATGCTTTAGGGTGTaGTGTCTGTCCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIKCFRV*CLSFCS
Trigger: AGAACAGAAGGACAGACAGCACACCCTAAAGCATTT...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGAAATGCTTTAGGGTGTaGTGTCTGTCCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKKCFRV*CLSFCS
Trigger: AGAACAGAAGGACAGACAGCACACCCTAAAGCATTT...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGAGAGAGACTGATTCATaGGCTCATAAATCACACGGA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWRETDS*AHKSHG
Trigger: TCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCT...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGAGAGAGACTGATTCATaGGCTCATAAATCACACGGA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQRETDS*AHKSHG
Trigger: TCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCT...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAGTCATGTCGGAATTCTaGATCCATCTTCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKVMSEF*IHLHFR
Trigger: TCTGAAGTGAAGATGGATGCAGAATTCCGACATGAC...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GAAAGCGATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTATCAATGCAGGTTTTaGTCCCTGATGGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: ESDHVISNDSVQSSCRKLYQCRF*SLMDLN
Trigger: ATTCAGATCCATCAGGGACCAAAACCTGCATTGATA...CAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATCGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAACATCCATCCTCTCCTaGTGTAAGAATTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKTSILS*CKNLHL
Trigger: CAAGTGCAAATTCTTACACCAGGAGAGGATGGATGT...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGCTCTCTTTGGCTTTCTaGAAATGGGCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKLSLAF*KWACSF
Trigger: GAATGAACATGCCCATTTCCAGAAAGCCAAAGAGAG...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACTCTCTTTGGCTTTCTaGAAATGGGCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLILSLAF*KWACSF
Trigger: GAATGAACATGCCCATTTCCAGAAAGCCAAAGAGAG...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTCCGTAACTGATCCTTaGTTCACTAATCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWSVTDP*FTNHVG
Trigger: GCCAACATGATTAGTGAACCAAGGATCAGTTACGGA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAAAAGAACTTGTAGGTTaGATTTTCGTAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAKELVG*IFVAVL
Trigger: CAGAACGGCTACGAAAATCCAACCTACAAGTTCTTT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACTGGGTAGTGAAGCAATaGTTTTGCTGTCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYWVVKQ*FCCPTS
Trigger: TGAAGTTGGACAGCAAAACCATTGCTTCACTACCCA...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAATAAATGGACACCGATaGGTAGTGAAGCAATGGTTT +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTAINGHR*VVKQWF
Trigger: AAACCATTGCTTCACTACCCATCGGTGTCCATTTAT...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGCTTGAAGTCTCAATGCCTAATGTGTGCACATAAAACAGGCACGAAGAAACAAAGAATAATATACAACTaGCTAAGGGGCTATGTGATA +
Preference number: 4 (lower is better)
Translates to: SLKSQCLMCAHKTGTKKQRIIYN*LRGYVI
Trigger: TATCACATAGCCCCTTAGCCAGTTGTATATTATTCT...TTGTTTCTTCGTGCCTGTTTTATGTGCACACATTAGGCATTGAGACTTCAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp ATCAAAACAGTGTGGTACTACAGTAAGCACAGGCACACAGATCAAAGAAAAGAAATAATCAAAACAGTGTaGTACTACAGTAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: IKTVWYYSKHRHTDQRKEIIKTV*YYSKHR
Trigger: CCTGTGCTTACTGTAGTACCACACTGTTTTGATTAT...TTCTTTTCTTTGATCTGTGTGCCTGTGCTTACTGTAGTACCACACTGTTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448850.5
CDS-3UTR TCA 90 bp ACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCATCATGTCATAAGCAATaGTTCTGTACAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: TLLMCGLIQVQASTCVTASCHKQ*FCTIIL
Trigger: CAGGATGATTGTACAGAATCATTGCTTATGACATGA...TGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGGAAATGCTGGATAACTaGCTTCTTATCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKEMLDN*LLISFR
Trigger: CCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTC...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGGAAATGCTGGATAACTaGCTTCTTATCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQEMLDN*LLISFR
Trigger: CCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTC...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR GCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGACTTTCTCCTGGAAATaGTGGATAACTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWTFSWK*WITAFL
Trigger: TAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGT...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGTTCTCCTGGAAATGCTaGATAACTGCCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKFSWKC*ITAFLS
Trigger: TGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAA...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp GATCATGTCATAAGCAATGATTCTGTACAATCATCCTGCAGAAAATTGTTTTGGTTCTCCTGGAAATGCTaGATAACTGCCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: DHVISNDSVQSSCRKLFWFSWKC*ITAFLS
Trigger: TGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAA...CCAAAACAATTTTCTGCAGGATGATTGTACAGAATCATTGCTTATGACATGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACCACACCATGATGAATaGATGTGTACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIPHHDE*MCTVSS
Trigger: AGAAGAAACAGTACACATCCATTCATCATGGTGTGG...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAAAGAACTTGTAGGTTaGATTTTCGTAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYKELVG*IFVAVL
Trigger: CAGAACGGCTACGAAAATCCAACCTACAAGTTCTTT...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAAAGAACTTGTAGGTTaGATTTTCGTAGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKKELVG*IFVAVL
Trigger: CAGAACGGCTACGAAAATCCAACCTACAAGTTCTTT...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGATAAATGGACACCGATaGGTAGTGAAGCAATGGTTT +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKINGHR*VVKQWF
Trigger: AAACCATTGCTTCACTACCCATCGGTGTCCATTTAT...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAATAAATGGACACCGATaGGTAGTGAAGCAATGGTTT +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKINGHR*VVKQWF
Trigger: AAACCATTGCTTCACTACCCATCGGTGTCCATTTAT...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAATAAATGGACACCGATaGGTAGTGAAGCAATGGTTT +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIINGHR*VVKQWF
Trigger: AAACCATTGCTTCACTACCCATCGGTGTCCATTTAT...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp TGGCTAAGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTAGAATAATATACAACTaGCTAAGGGGCTATGTGATA +
Preference number: 4 (lower is better)
Translates to: WLRGYVINNQERIYSCTSRIIYN*LRGYVI
Trigger: TATCACATAGCCCCTTAGCCAGTTGTATATTATTCT...ACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCTTAGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR TCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAATCATGTCATAAGCAATaGTTCTGTACAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKSCHKQ*FCTIIL
Trigger: CAGGATGATTGTACAGAATCATTGCTTATGACATGA...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR TCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGTCATGTCATAAGCAATaGTTCTGTACAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKSCHKQ*FCTIIL
Trigger: CAGGATGATTGTACAGAATCATTGCTTATGACATGA...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCTTGAAGTCTCAATaGCTAATGTGTGCACATAAA +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYSLKSQ*LMCAHK
Trigger: TTTATGTGCACACATTAGGCATTGAGACTTCAAGCT...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp CCCCACCCAAAATTACTTCGATTATTTAATGTCTGTAGTCATCCTTCAAAGAAAAGCTTGAAGTCTCAATaGCTAATGTGTGCACATAAA +
Preference number: 4 (lower is better)
Translates to: PHPKLLRLFNVCSHPSKKSLKSQ*LMCAHK
Trigger: TTTATGTGCACACATTAGGCATTGAGACTTCAAGCT...TTTCTTTGAAGGATGACTACAGACATTAAATAATCGAAGTAATTTTGGGTGGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp AAAGTAGGACTTAATTGGGTCACAAACCACAAGAATAATATACAACTGGCTAAGAGCTTGAAGTCTCAATaGCTAATGTGTGCACATAAA +
Preference number: 4 (lower is better)
Translates to: KVGLNWVTNHKNNIQLAKSLKSQ*LMCAHK
Trigger: TTTATGTGCACACATTAGGCATTGAGACTTCAAGCT...CTTAGCCAGTTGTATATTATTCTTGTGGTTTGTGACCCAATTAAGTCCTACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR GCA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGAGCTTGAAGTCTCAATaGCTAATGTGTGCACATAAA +
Preference number: 4 (lower is better)
Translates to: GYVINNQERIYSCTSLIQSLKSQ*LMCAHK
Trigger: TTTATGTGCACACATTAGGCATTGAGACTTCAAGCT...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CCA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCAGAATAATATACAACTaGCTAAGGGGCTATGTGATA +
Preference number: 4 (lower is better)
Translates to: YITDVWINSSSGIYLCYSRIIYN*LRGYVI
Trigger: TATCACATAGCCCCTTAGCCAGTTGTATATTATTCT...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp GAATACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGAATAATATACAACTaGCTAAGGGGCTATGTGATA +
Preference number: 4 (lower is better)
Translates to: EYITDVWINSSSGIYLCYRIIYN*LRGYVI
Trigger: TATCACATAGCCCCTTAGCCAGTTGTATATTATTCT...GTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTATTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CCA 90 bp AGGGGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATAAGAATAATATACAACTaGCTAAGGGGCTATGTGATA +
Preference number: 4 (lower is better)
Translates to: RGYVINNQERIYSCTSLIRIIYN*LRGYVI
Trigger: TATCACATAGCCCCTTAGCCAGTTGTATATTATTCT...TATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCCCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS GCA 90 bp CCGGGCAGCATCGCGACCCTGCGCGGGGCACCGAGTGCGCTGCTGTaGGAGTGGGATCCGCCGCGTCCTTGCTCTGCCCGCGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: PGSIATLRGAPSALL*EWDPPRPCSARAAT
Trigger: GGTGGCGGCGCGGGCAGAGCAAGGACGCGGCGGATCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGCCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000474136.5
CDS CCA 90 bp AGCATCGCGACCCTGCGCGGGGCACCGAGTGCGCTGCTGTGCGAGTaGGATCCGCCGCGTCCTTGCTCTGCCCGCGCCGCCACCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SIATLRGAPSALLCE*DPPRPCSARAATAA
Trigger: GGCGGCGGTGGCGGCGCGGGCAGAGCAAGGACGCGGCGGATCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000474136.5
CDS GCA 90 bp CCAAACCGGGCAGCATCGCGACCCTGCGCGGGGCACCGAGTGCGCTaGTGTGCGAGTGGGATCCGCCGCGTCCTTGCTCTGCCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: PNRAASRPCAGHRVR*CASGIRRVLALPAP
Trigger: CGGCGCGGGCAGAGCAAGGACGCGGCGGATCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGCCCGGTTTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000474136.5
CDS GCA 90 bp GGGTACCTCCAGCGCCCGAGCCGTCCAGGCGGCCAGCAGGAGCAGTaGCAAACCGGGCAGCATCGCGACCCTGCGCGGGGCACCGAGTGC +
Preference number: 5 (lower is better)
Translates to: GYLQRPSRPGGQQEQ*QTGQHRDPARGTEC
Trigger: GCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGCCCGGTTTGGCACTGCTCCTGCTGGCCGCCTGGACGGCTCGGGCGCTGGAGGTACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000358918.7
ENST00000474136.5
CDS GCA 90 bp AGGCGGCCAGCAGGAGCAGTGCCAAACCGGGCAGCATCGCGACCCTaGGCGGGGCACCGAGTGCGCTGCTGTGCGAGTGGGATCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RRPAGAVPNRAASRP*AGHRVRCCASGIRR
Trigger: GCGGCGGATCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGCCCGGTTTGGCACTGCTCCTGCTGGCCGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000474136.5
CDS GCA 90 bp GTAGACCTCCAGCGCCCGAGCCGTCCAGGCGGCCAGCAGGAGCAGTaGCAAACCGGGCAGCATCGCGACCCTGCGCGGGGCACCGAGTGC +
Preference number: 5 (lower is better)
Translates to: VDLQRPSRPGGQQEQ*QTGQHRDPARGTEC
Trigger: GCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGCCCGGTTTGGCACTGCTCCTGCTGGCCGCCTGGACGGCTCGGGCGCTGGAGGTCTAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354192.7
ENST00000439274.6
CDS GCA 90 bp CAGTGCCAAACCGGGCAGCATCGCGACCCTGCGCGGGGCACCGAGTaGGCTGCTGTGCGAGTGGGATCCGCCGCGTCCTTGCTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: QCQTGQHRDPARGTE*AAVRVGSAASLLCP
Trigger: CGGGCAGAGCAAGGACGCGGCGGATCCCACTCGCACAGCAGCGCACTCGGTGCCCCGCGCAGGGTCGCGATGCTGCCCGGTTTGGCACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000474136.5
CDS-3UTR CAA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCGGATCCGCCGCGTCCTaGCTCTGCCCGCGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFGSAAS*LCPRRH
Trigger: GTGGCGGCGCGGGCAGAGCAAGGACGCGGCGGATCC...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS GCA 90 bp AGCAGCGGTAGGGAATCACAAAGTGGGGATGGGTCTTGCACTGCTTaGGGCCCCGCTTGCACCAGTTCTGGATGGTCACTGGTTGGTTGG +
Preference number: 5 (lower is better)
Translates to: SSGRESQSGDGSCTA*GPACTSSGWSLVGW
Trigger: CCAACCAACCAGTGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGATTCCCTACCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000358918.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000462267.1
ENST00000474136.5
CDS GCA 90 bp GGCACACTTCCCTTCAGTCACATCAAAGTACCAGCGGGAGATCATTaGTCGGCACGGCCCCGTCTCGGCTTGTTCAGAGCACACCTCTCG +
Preference number: 5 (lower is better)
Translates to: GTLPFSHIKVPAGDH*SARPRLGLFRAHLS
Trigger: CGAGAGGTGTGCTCTGAACAAGCCGAGACGGGGCCGTGCCGAGCAATGATCTCCCGCTGGTACTTTGATGTGACTGAAGGGAAGTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000358918.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000491395.5
CDS GCA 90 bp GCTCACCTAAGCAGCGGTAGGGAATCACAAAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCTTGCACCAGTTCTGGATGGTCACTG +
Preference number: 5 (lower is better)
Translates to: AHLSSGRESQSGDGS*TACGPACTSSGWSL
Trigger: CAGTGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGATTCCCTACCGCTGCTTAGGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462267.1
CDS GCA 90 bp CACCAACTAAGCAGCGGTAGGGAATCACAAAGTGGGGATGGGTCTTaGACTGCTTGCGGCCCCGCTTGCACCAGTTCTGGATGGTCACTG +
Preference number: 5 (lower is better)
Translates to: HQLSSGRESQSGDGS*TACGPACTSSGWSL
Trigger: CAGTGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGATTCCCTACCGCTGCTTAGTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000358918.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000474136.5
CDS CCA 90 bp TGGGGATGGGTCTTGCACTGCTTGCGGCCCCGCTTGCACCAGTTCTaGATGGTCACTGGTTGGTTGGCTTCTACCACATTGGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: WGWVLHCLRPRLHQF*MVTGWLASTTLVIC
Trigger: GCAGATCACCAATGTGGTAGAAGCCAACCAACCAGTGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000358918.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000462267.1
ENST00000474136.5
CDS CCA 90 bp TCTGTGTTGGCTGGCACAGAGTCAGCCCCAAAAGAATGCCACGGCTaGAGATCGTCCAGGCTGAACTCTCCATTCACGGGAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SVLAGTESAPKECHG*RSSRLNSPFTGRSS
Trigger: GGAGCTCCTTCCCGTGAATGGAGAGTTCAGCCTGGACGATCTCCAGCCGTGGCATTCTTTTGGGGCTGACTCTGTGCCAGCCAACACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000358918.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS CCA 90 bp GGGACACTCGAACCACCTCTTCCACAGACTCTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTTCTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: GTLEPPLPQTLWWWW*WWQCWWFSLWLLRR
Trigger: CCTACGAAGAAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415997.1
CDS CCA 90 bp CCTCTTCCACAGACTCTGTGGTGGTGGTGGTGGTGGTGGCAATGCTaGTGGTTCTCTCTGTGGCTTCTTCGTAGGGTTCCTCAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: PLPQTLWWWWWWWQC*WFSLWLLRRVPQPL
Trigger: AAGAGGCTGAGGAACCCTACGAAGAAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000358918.7
ENST00000359726.7
ENST00000415997.1
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000474136.5
ENST00000491395.5
CDS CCA 90 bp ACACCTCTCGAACCACCTCTTCCACAGACTCTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTTCTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: TPLEPPLPQTLWWWW*WWQCWWFSLWLLRR
Trigger: CCTACGAAGAAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGAGGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000358918.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000491395.5
CDS CCA 90 bp AGCACACCTCTCGAACCACCTCTTCCACAGACTCTGTGGTGGTGGTaGTGGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTTCTTCGT +
Preference number: 5 (lower is better)
Translates to: STPLEPPLPQTLWWW*WWWQCWWFSLWLLR
Trigger: ACGAAGAAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGAGGTGTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000358918.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000491395.5
CDS CCA 90 bp GTTCAGAGCACACCTCTCGAACCACCTCTTCCACAGACTCTGTGGTaGTGGTGGTGGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: VQSTPLEPPLPQTLW*WWWWWQCWWFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGAGGTGTGCTCTGAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000358918.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000491395.5
CDS GCA 90 bp GAATCACAAAGTGGGGATGGGTCTTGCACTGCTTGCGGCCCCGCTTaGACCAGTTCTGGATGGTCACTGGTTGGTTGGCTTCTACCACAT +
Preference number: 5 (lower is better)
Translates to: ESQSGDGSCTACGPA*TSSGWSLVGWLLPH
Trigger: ATGTGGTAGAAGCCAACCAACCAGTGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCATCCCCACTTTGTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000358918.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000462267.1
ENST00000474136.5
CDS CCA 90 bp CTTGCACTGCTTGCGGCCCCGCTTGCACCAGTTCTGGATGGTCACTaGTTGGTTGGCTTCTACCACATTGGTGATCTGCAGTTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: LALLAAPLAPVLDGH*LVGFYHIGDLQFRV
Trigger: TACCCTGAACTGCAGATCACCAATGTGGTAGAAGCCAACCAACCAGTGACCATCCAGAACTGGTGCAAGCGGGGCCGCAAGCAGTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000358918.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
ENST00000462267.1
ENST00000474136.5
CDS CCA 90 bp TTTGGGACACTCGAACCACCTCTTCCACAGACTCTGTGGTGGTGGTaGTGGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTTCTTCGT +
Preference number: 5 (lower is better)
Translates to: FGTLEPPLPQTLWWW*WWWQCWWFSLWLLR
Trigger: ACGAAGAAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGTGTCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415997.1
CDS CCA 90 bp ACTTCTCTCGAACCACCTCTTCCACAGACTCTGTGGTGGTGGTGGTaGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTTCTTCGTAGG +
Preference number: 5 (lower is better)
Translates to: TSLEPPLPQTLWWWW*WWQCWWFSLWLLRR
Trigger: CCTACGAAGAAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGAGAAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474136.5
CDS CCA 90 bp ACCACTTCTCTCGAACCACCTCTTCCACAGACTCTGTGGTGGTGGTaGTGGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTTCTTCGT +
Preference number: 5 (lower is better)
Translates to: TTSLEPPLPQTLWWW*WWWQCWWFSLWLLR
Trigger: ACGAAGAAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGAGAAGTGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474136.5
CDS-3UTR CAA 90 bp ACATTATTCTATAAATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCGGATCCGCCGCGTCCTaGCTCTGCCCGCGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: TLFYKWTPMGSEAMVLLSGSAAS*LCPRRH
Trigger: GTGGCGGCGCGGGCAGAGCAAGGACGCGGCGGATCC...GGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATTTATAGAATAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CAA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTTGGGTCTTGCACTGCTaGCGGCCCCGCTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEAWVLHC*RPRLHQ
Trigger: CTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCA...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CAA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCCGGCCCCGTCTCGGCTaGTTCAGAGCACACCTCTCG +
Preference number: 5 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFRPRLG*FRAHLS
Trigger: CGAGAGGTGTGCTCTGAACAAGCCGAGACGGGGCCG...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346798.8
ENST00000357903.7
CDS-3UTR CAA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTACCAGCGGGAGATCATaGCTCGGCACGGCCCCGTCT +
Preference number: 5 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEATSGRS*LGTAPS
Trigger: AGACGGGGCCGTGCCGAGCAATGATCTCCCGCTGGT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000439274.6
ENST00000440126.7
CDS GCA 90 bp CACACACGGCCATGCAGTACTCTTCTGTGTCAAAGTTGTTCCGGTTaGCGCCACATCCGCCGTAAAAGAATGGGGCACACTTCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: HTRPCSTLLCQSCSG*RHIRRKRMGHTSLQ
Trigger: CTGAAGGGAAGTGTGCCCCATTCTTTTACGGCGGATGTGGCGGCAACCGGAACAACTTTGACACAGAAGAGTACTGCATGGCCGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000357903.7
ENST00000358918.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000491395.5
CDS GCA 90 bp CATTACCATCAGTGGGTACCTAGTGGTGGGTGGATTTCACTAGGCTaGAGCCTCCACACAGCTTTTCTTTGCTGCACTGCAGAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: HYHQWVPSGGWISLG*SLHTAFLCCTAEAP
Trigger: TGGCGCCTCTGCAGTGCAGCAAAGAAAAGCTGTGTGGAGGCTGCAGCCTAGTGAAATCCACCCACCACTAGGTACCCACTGATGGTAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466453.1
CDS CCA 90 bp GTAAACTTTGGGACACTCGAACCACCTCTTCCACAGACTCTGTGGTaGTGGTGGTGGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: VNFGTLEPPLPQTLW*WWWWWQCWWFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGTGTCCCAAAGTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415997.1
CDS CCA 90 bp CCTTATACCACTTCTCTCGAACCACCTCTTCCACAGACTCTGTGGTaGTGGTGGTGGTGGTGGCAATGCTGGTGGTTCTCTCTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PYTTSLEPPLPQTLW*WWWWWQCWWFSLWL
Trigger: AAGCCACAGAGAGAACCACCAGCATTGCCACCACCACCACCACCACCACAGAGTCTGTGGAAGAGGTGGTTCGAGAGAAGTGGTATAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474136.5
CDS-3UTR CAA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTGGGTCTTGCACTGCTaGCGGCCCCGCTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPWVLHC*RPRLHQ
Trigger: CTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCA...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS-3UTR CAA 90 bp AATGGACACCGATGGGTAGTGAAGCAATGGTTTTGCTGTCCAACTTCAGAGGCTAGGCGGCGGCGGTCATaGAGCATGGCTTCCACTCTG +
Preference number: 5 (lower is better)
Translates to: NGHRWVVKQWFCCPTSEARRRRS*SMASTL
Trigger: CAGAGTGGAAGCCATGCTCAATGACCGCCGCCGCCT...AGCCTCTGAAGTTGGACAGCAAAACCATTGCTTCACTACCCATCGGTGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
CDS-3UTR CAA 90 bp AGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTTATATTGCCACTTCCATTTTCAGGCGGCGGCGGTCATaGAGCATGGCTTCCACTCTG +
Preference number: 5 (lower is better)
Translates to: RVCPGMPSSSPYIATSIFRRRRS*SMASTL
Trigger: CAGAGTGGAAGCCATGCTCAATGACCGCCGCCGCCT...GAAAATGGAAGTGGCAATATAAGGGGATGAGGAAGGCATGCCTGGACAAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS CCA 90 bp TGGACATTCATGTGCATGTTCAGTCTGCCACAGAACATGGCAATCTaGGGTTCAGCCAGCAGGCCAGCATTACCATCAGTGGGTACCTCC +
Preference number: 5 (lower is better)
Translates to: WTFMCMFSLPQNMAI*GSASRPALPSVGTS
Trigger: GGAGGTACCCACTGATGGTAATGCTGGCCTGCTGGCTGAACCCCAGATTGCCATGTTCTGTGGCAGACTGAACATGCACATGAATGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000357903.7
ENST00000358918.7
ENST00000474136.5
CDS CCA 90 bp TGGACATTCATGTGCATGTTCAGTCTGCCACAGAACATGGCAATCTaGGGTTCAGCCAGCAGGCCAGCATTACCATCAGTGGGTACCTGG +
Preference number: 5 (lower is better)
Translates to: WTFMCMFSLPQNMAI*GSASRPALPSVGTW
Trigger: CCAGGTACCCACTGATGGTAATGCTGGCCTGCTGGCTGAACCCCAGATTGCCATGTTCTGTGGCAGACTGAACATGCACATGAATGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359726.7
CDS-3UTR CAA 90 bp TACATTACTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCGGATCCGCCGCGTCCTaGCTCTGCCCGCGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: YITDVWINSSSGIYLCYSGSAAS*LCPRRH
Trigger: GTGGCGGCGCGGGCAGAGCAAGGACGCGGCGGATCC...GCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAGTAATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CAA 90 bp TTGAAGACACATCTTAAAAGAAGGGTTTGTCCAGGCATGCCTTCCTCATCCCCTAGGCGGCGGCGGTCATaGAGCATGGCTTCCACTCTG +
Preference number: 5 (lower is better)
Translates to: LKTHLKRRVCPGMPSSSPRRRRS*SMASTL
Trigger: CAGAGTGGAAGCCATGCTCAATGACCGCCGCCGCCT...AGGGGATGAGGAAGGCATGCCTGGACAAACCCTTCTTTTAAGATGTGTCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000359726.7
CDS CCA 90 bp ACTTGTCAATTCCGCAGGGCAGCAACATGCCGTAGTCATGCAAGTTaGTACTCTTCTCACTGCATGTCTCTTTGGCGACGGTGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: TCQFRRAATCRSHAS*YSSHCMSLWRRCAS
Trigger: ACTGGCACACCGTCGCCAAAGAGACATGCAGTGAGAAGAGTACCAACTTGCATGACTACGGCATGTTGCTGCCCTGCGGAATTGACAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
ENST00000358918.7
ENST00000359726.7
ENST00000439274.6
ENST00000440126.7
ENST00000448850.5
ENST00000463070.1
ENST00000474136.5
CDS CCA 90 bp GCTGCTGTTGTAGGAAGTTTAACAGGATCTCGGGCAAGAGGTTCCTaGGTAGTCTTGAGTAAACTTTGGGACATGGCGCTGCCACACACG +
Preference number: 5 (lower is better)
Translates to: AAVVGSLTGSRARGS*VVLSKLWDMALPHT
Trigger: CGTGTGTGGCAGCGCCATGTCCCAAAGTTTACTCAAGACTACCCAGGAACCTCTTGCCCGAGATCCTGTTAAACTTCCTACAACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346798.8
ENST00000358918.7
ENST00000439274.6
CDS-3UTR CAA 90 bp GGCTATGTGATAAATAATCAGGAGAGAATCTATTCATGCACTAGTTTGATACAGGGATCCGCCGCGTCCTaGCTCTGCCCGCGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: GYVINNQERIYSCTSLIQGSAAS*LCPRRH
Trigger: GTGGCGGCGCGGGCAGAGCAAGGACGCGGCGGATCC...CTGTATCAAACTAGTGCATGAATAGATTCTCTCCTGATTATTTATCACATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346798.8
ENST00000348990.9
ENST00000354192.7
ENST00000357903.7
CDS-3UTR CAA 90 bp CTGATGTGTGGATTAATTCAAGTTCAGGCATCTACTTGTGTTACAGCACAGCTGTGGGTCTTGCACTGCTaGCGGCCCCGCTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: LMCGLIQVQASTCVTAQLWVLHC*RPRLHQ
Trigger: CTGGTGCAAGCGGGGCCGCAAGCAGTGCAAGACCCA...CAGCTGTGCTGTAACACAAGTAGATGCCTGAACTTGAATTAATCCACACATCAG
52% GC, longest homopolymer 4 nt, total homop