Pregenerated sensors for APOO (Homo sapiens)
Ensembl gene IDs: ENSG00000184831Ensembl transcript IDs: ENST00000633372.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CAA 90 bp | ACTCCGGCAGGCCACCAACAGCAGAACGGCAGGACAACGCGGAGTTaGGCTGAGGGCGGTCAGAGGAGAGCCTGGCTGCTAAGCGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TPAGHQQQNGRTTRS*AEGGQRRAWLLSGL Trigger: CAGGCCGCTTAGCAGCCAGGCTCTCCTCTGACCGCCCTCAGCCAAACTCCGCGTTGTCCTGCCGTTCTGCTGTTGGTGGCCTGCCGGAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633372.1 |
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| CDS CAA 72 bp | GGCCACCAACAGCAGAACGGCAGGACAACGCGGAGTTaGGCTGAGGGCGGTCAGAGGAGAGCCTGGCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: GHQQQNGRTTRS*AEGGQRRAWLL Trigger: TAGCAGCCAGGCTCTCCTCTGACCGCCCTCAGCCAAACTCCGCGTTGTCCTGCCGTTCTGCTGTTGGTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633372.1 |
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| CDS CAA 72 bp | CACGACCTGCCCATCTGCCTGCTTTCCCTAGGGGTTTaGAGCAGTGGGGCACCTAAGAAGTGGGCCACACTC | + |
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Preference number: 6 (lower is better) Translates to: HDLPICLLSLGV*SSGAPKKWATL Trigger: GAGTGTGGCCCACTTCTTAGGTGCCCCACTGCTCAAAACCCCTAGGGAAAGCAGGCAGATGGGCAGGTCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000633372.1 |
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| CDS TCA 72 bp | CCACTCCATACCCCTTCTGGCTCCGTTTCCATCTGCTaGGTGCTACTTCCACCATTCAATAAAACCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: PLHTPSGSVSIC*VLLPPFNKTLH Trigger: GTGCAAGGTTTTATTGAATGGTGGAAGTAGCACTCAGCAGATGGAAACGGAGCCAGAAGGGGTATGGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000633372.1 |
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| CDS GCA 72 bp | GGCAAGAACCCTAGGATACAGAAAGCCCTCTGTCCTTaGAATAAGGCAGAGGGTCTAACTGAGCTGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: GKNPRIQKALCP*NKAEGLTELMN Trigger: GTTCATCAGCTCAGTTAGACCCTCTGCCTTATTGCAAGGACAGAGGGCTTTCTGTATCCTAGGGTTCTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000633372.1 |
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