RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APOL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000128284

Ensembl transcript IDs: ENST00000349314.6, ENST00000361710.6, ENST00000397287.6, ENST00000397289.6, ENST00000397293.6, ENST00000422426.5, ENST00000426939.6, ENST00000432700.5, ENST00000472303.1, ENST00000487355.5, ENST00000487783.5, ENST00000525184.1, ENST00000530895.5, ENST00000531095.1, ENST00000531195.1, ENST00000533061.1

Found 606 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGGTGCCTGCAATCGTTCTCTCTGCTTGACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGC +
Preference number: 1 (lower is better)
Translates to: GGACNRSLCLTTTSS*DSPGGHRESGPGSG
Trigger: GCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCAGGCACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR GCA 90 bp CAAGGAAGATGCCTGAAGTGGTCGCACTCAGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGCCTGCAATCGTTCTCTCTGCTTGAC +
Preference number: 1 (lower is better)
Translates to: QGRCLKWSHSGSGLL*SLPGWCLQSFSLLD
Trigger: GTCAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR CCA 90 bp AGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTT +
Preference number: 1 (lower is better)
Translates to: RFSHTLQDVWVFRDT*SSAGDNGHGSLPGL
Trigger: AAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR TCA 90 bp TGGTTTGGATTGTGGTGCCACCACCTTAAAGTTGATGGAGAAGTGTaGGCAAGTGCCAAAGAGAAATACACCTGCCTCCTGATGGGAGAA +
Preference number: 1 (lower is better)
Translates to: WFGLWCHHLKVDGEV*ASAKEKYTCLLMGE
Trigger: TTCTCCCATCAGGAGGCAGGTGTATTTCTCTTTGGCACTTGCTCACACTTCTCCATCAACTTTAAGGTGGTGGCACCACAATCCAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487783.5
3UTR-3UTR GCA 90 bp CAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: QLRFARWSQGVGPWLWLAGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...GGCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp CTTGACCACCACTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LDHHFQLRFARWSQGVGPGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGTCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTCCACGATGCTGGTGGTaGTCCCAGTCACAGCAGACG +
Preference number: 2 (lower is better)
Translates to: LPAEIRQVVTGSRALALAPRCWW*SQSQQT
Trigger: CGTCTGCTGTGACTGGGATCACCACCAGCATCGTGG...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TCTGCTCACTGCCCGGGTGGTGCCTGCAATCGTTCTCTCTGCTTGACCACCACTGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: SAHCPGGACNRSLCLTTTGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...AGTGGTGGTCAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 2 (lower is better)
Translates to: LPAEIRQVVTGSRALALAQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp CCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCAGCAGGATTTGCAGATaGACTGGGCTGACTCTCTCC +
Preference number: 2 (lower is better)
Translates to: PAEIRQVVTGSRALALACSRICR*TGLTLS
Trigger: GGAGAGAGTCAGCCCAGTGCATCTGCAAATCCTGCT...GCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGCTCCTCTGCTCACTaGCCGGGTGGTGCCTGCAAT +
Preference number: 2 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQGSSAH*PGGACN
Trigger: ATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCC...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGGCTCCTCTGCTCACTaGCCGGGTGGTGCCTGCAAT +
Preference number: 2 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDGSSAH*PGGACN
Trigger: ATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TCTGCTCACTGCCCGGGTGGTGCCTGCAATCGTTCTCTCTGCTTGACCACCACTGGCTCCTCTGCTCACTaGCCGGGTGGTGCCTGCAAT +
Preference number: 2 (lower is better)
Translates to: SAHCPGGACNRSLCLTTTGSSAH*PGGACN
Trigger: ATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCC...AGTGGTGGTCAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTTGCTCACTGCCCGGGTaGTGCCTGCAATCGTTCTCT +
Preference number: 2 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLCSLPG*CLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCA...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp CCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 2 (lower is better)
Translates to: PAEIRQVVTGSRALALACLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...GCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp CAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCTGCAATCGTTCTCTCTaGTTGACCACCACTTCCAGC +
Preference number: 2 (lower is better)
Translates to: QLRFARWSQGVGPWLWLACNRSL*LTTTSS
Trigger: GCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCA...GGCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGCCCTGCTGGCTGCACTaGTCTGGGGTCAGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQPCWLH*SGVSGY
Trigger: ATACCCACTGACCCCAGACCAGTGCAGCCAGCAGGG...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTAGCAGGATTTGCAGATaGACTGGGCTGACTCTCTCC +
Preference number: 2 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLSRICR*TGLTLS
Trigger: GGAGAGAGTCAGCCCAGTGCATCTGCAAATCCTGCT...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CTTGACCACCACTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: LDHHFQLRFARWSQGVGPWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGCTCAGCTGGGGACAATaGCCATGGCTCATTACCTGG +
Preference number: 2 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQLSWGQ*PWLITW
Trigger: CCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACCTCAGCTGGGGACAATaGCCATGGCTCATTACCTGG +
Preference number: 2 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDLSWGQ*PWLITW
Trigger: CCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCTGGCTGCACTGGTCTaGGGTCAGTGGGTATGGCAT +
Preference number: 2 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRLAALV*GQWVWH
Trigger: ATGCCATACCCACTGACCCCAGACCAGTGCAGCCAG...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACTTTCTTAACCCTGGGTaGCCTCTGCCCTCCGTGGCA +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDFLNPG*PLPSVA
Trigger: TGCCACGGAGGGCAGAGGCCACCCAGGGTTAAGAAA...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487355.5
3UTR-3UTR TCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACTGCAAGGAAGATGCCTaGAGTGGTCGCACTCAGGAT +
Preference number: 2 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDCKEDA*SGRTQD
Trigger: ATCCTGAGTGCGACCACTTCAGGCATCTTCCTTGCA...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR GCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGAGCAGGATTTGCAGATaGACTGGGCTGACTCTCTCC +
Preference number: 2 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQSRICR*TGLTLS
Trigger: GGAGAGAGTCAGCCCAGTGCATCTGCAAATCCTGCT...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACGAGGGGCTGGATCTCTaGAATCCCTTTGCGTGTCAG +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDEGLDL*NPFACQ
Trigger: CTGACACGCAAAGGGATTGCAGAGATCCAGCCCCTC...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432700.5
3UTR-3UTR CCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 2 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCATGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR TCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGAAAGCGTTTCTTTTCTaGGTCCATGGTGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQKAFLF*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGAAAAGAAACGCTTT...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCCACGATGCTGGTGGTaGTCCCAGTCACAGCAGACG +
Preference number: 2 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNPRCWW*SQSQQT
Trigger: CGTCTGCTGTGACTGGGATCACCACCAGCATCGTGG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR GCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCATTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 2 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLLFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 2 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGCATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 2 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 2 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 2 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGGATTTCACTCCCAATaGTTTGTGTGGCTTCGTAAT +
Preference number: 2 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLGFHSQ*FVWLRN
Trigger: ATTACGAAGCCACACAAACCATTGGGAGTGAAATCC...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 2 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTGACCAGCAAGGGACATaGTGCCAGAGGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: LVGSRILSRMFGFLETPGDQQGT*CQRQRQ
Trigger: CTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTC...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGCAGGATTTGCAGATaGACTGGGCTGACTCTCTCC +
Preference number: 2 (lower is better)
Translates to: CKWCQNKTSKGHDARGSASRICR*TGLTLS
Trigger: GGAGAGAGTCAGCCCAGTGCATCTGCAAATCCTGCT...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR GCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCCAGTGCAAGGAAGATaGCTGAAGTGGTCGCACTCA +
Preference number: 2 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYPVQGR*LKWSHS
Trigger: TGAGTGCGACCACTTCAGGCATCTTCCTTGCACTGG...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 2 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 2 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCTGAAATCCGAGGTGTaGGAGGCAGCACTTGGACTA +
Preference number: 2 (lower is better)
Translates to: CKWCQNKTSKGHDARGSALKSEV*EAALGL
Trigger: TAGTCCAAGTGCTGCCTCCCACACCTCGGATTTCAG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487355.5
3UTR-3UTR TCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGACCAGCAAGGGACATaGTGCCAGAGGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPDQQGT*CQRQRQ
Trigger: CTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTC...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 2 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 2 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 2 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR GCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDLFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 2 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp AACGCTTTACACCAGTGTCTTCAAAATCTGAGTCCATGGTGCCAGCAGCCAGGTGAGGGGCTGGATCTCTaGAATCCCTTTGCGTGTCAG +
Preference number: 2 (lower is better)
Translates to: NALHQCLQNLSPWCQQPGEGLDL*NPFACQ
Trigger: CTGACACGCAAAGGGATTGCAGAGATCCAGCCCCTC...ACCTGGCTGCTGGCACCATGGACTCAGATTTTGAAGACACTGGTGTAAAGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530895.5
3UTR-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCTCAGCTGGGGACAATaGCCATGGCTCATTACCTGG +
Preference number: 2 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNLSWGQ*PWLITW
Trigger: CCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 2 (lower is better)
Translates to: GSRILSRMFGFLETPGPQHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 2 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR TCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCACTCGTATACAAGGTTaGCCACATCCAGTGCAAGGA +
Preference number: 2 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELTRIQG*PHPVQG
Trigger: TCCTTGCACTGGATGTGGTCAACCTTGTATACGAGT...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp TCAAACGCTTTACACCAGTGTCTTCAAAATCTGAGTCCATGGTGCCAGCAGCCACAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 2 (lower is better)
Translates to: SNALHQCLQNLSPWCQQPQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...TGGCTGCTGGCACCATGGACTCAGATTTTGAAGACACTGGTGTAAAGCGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530895.5
3UTR-3UTR GCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 2 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDNCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR CCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 2 (lower is better)
Translates to: GSRILSRMFGFLETPGPQACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCATTTTCTATGGACTCCTaGATCTTCCTCTTGACTTGG +
Preference number: 2 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSFSMDS*IFLLTW
Trigger: CCAAGTCAAGAGGAAGATCCAGGAGTCCATAGAAAA...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 2 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp TCTGCTCACTGCCCGGGTGGTGCCTGCAATCGTTCTCTCTGCTTGACCACCACTTTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: SAHCPGGACNRSLCLTTTFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...AGTGGTGGTCAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGAAAGCGTTTCTTTTCTaGGTCCATGGTGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: GSRILSRMFGFLETPGPQKAFLF*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGAAAAGAAACGCTTT...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTTTTSS*DSPGGH
Trigger: GTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGT...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPTTTSS*DSPGGH
Trigger: GTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGT...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 2 (lower is better)
Translates to: NLLGPSQLVFREILLAPALQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
3UTR-3UTR GCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTCACTGCCCGGGTGGTaGCTGCAATCGTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPSLPGW*LQSFSL
Trigger: CAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGA...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATAGCAGATGCAGACTTTaGCCCCTCATGCAAGTGCTT +
Preference number: 2 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNSRCRL*PLMQVL
Trigger: AAGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCT...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: FFLVGSRILSRMFGFLETVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 2 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: LISWAPASWYLEKFYLLQDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000487783.5
3UTR-3UTR CCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGAAGATGCCTGAAGTaGTCGCACTCAGGATCCGGG +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPGRCLK*SHSGSG
Trigger: CCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCC...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACTCAGTGGGTATGGCATaGATTCAGACGCTGATAGAT +
Preference number: 2 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYSVGMA*IQTLID
Trigger: ATCTATCAGCGTCTGAATCCATGCCATACCCACTGA...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACAGTTTCACTTTCAGTTaGGGGATTGAATGTTTTTCC +
Preference number: 2 (lower is better)
Translates to: KTRPARDMMPEAAPVELDSFTFS*GIECFS
Trigger: GGAAAAACATTCAATCCCTCAACTGAAAGTGAAACT...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487355.5
3UTR-3UTR GCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: CKWCQNKTSKGHDARGSANCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR GCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: CKWCQNKTSKGHDARGSALFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
3UTR-3UTR CCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: LVGSRILSRMFGFLETPGPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: LVGSRILSRMFGFLETPGWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCTTTTCTATGGACTCCTaGATCTTCCTCTTGACTTGG +
Preference number: 2 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELFSMDS*IFLLTW
Trigger: CCAAGTCAAGAGGAAGATCCAGGAGTCCATAGAAAA...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTTTTCTATGGACTCCTaGATCTTCCTCTTGACTTGG +
Preference number: 2 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEFSMDS*IFLLTW
Trigger: CCAAGTCAAGAGGAAGATCCAGGAGTCCATAGAAAA...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCCAGTGCAAGGAAGATaGCTGAAGTGGTCGCACTCA +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPPVQGR*LKWSHS
Trigger: TGAGTGCGACCACTTCAGGCATCTTCCTTGCACTGG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 2 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR TCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCTTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAAT +
Preference number: 2 (lower is better)
Translates to: LVGSRILSRMFGFLETPGVFRDT*SSAGDN
Trigger: ATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAAC...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp CTTGGAATTTTTGCCTCCAGAACTGTGAGAAAATACATCAGTTGTTGGAGCCACGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: LGIFASRTVRKYISCWSHDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...GTGGCTCCAACAACTGATGTATTTTCTCACAGTTCTGGAGGCAAAAATTCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531195.1
3UTR-3UTR TCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 2 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TTTGGTGGCCTCTTCAGTAAAGCGTTTCTTTTCTTGGAATTTTTGCCTCCAGAAAGCAGGATTTGCAGATaGACTGGGCTGACTCTCTCC +
Preference number: 2 (lower is better)
Translates to: FGGLFSKAFLFLEFLPPESRICR*TGLTLS
Trigger: GGAGAGAGTCAGCCCAGTGCATCTGCAAATCCTGCT...TTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTTACTGAAGAGGCCACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531195.1
3UTR-3UTR GCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 2 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAAT +
Preference number: 2 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTVFRDT*SSAGDN
Trigger: ATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAAC...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR CAA 90 bp TTTGTCCTCAATAATGGTTTGGATTGTGGTGCCACCACCTTAAAGTaGATGGAGAAGTGTGAGCAAGTGCCAAAGAGAAATACACCTGCC +
Preference number: 2 (lower is better)
Translates to: FVLNNGLDCGATTLK*MEKCEQVPKRNTPA
Trigger: GGCAGGTGTATTTCTCTTTGGCACTTGCTCACACTTCTCCATCAACTTTAAGGTGGTGGCACCACAATCCAAACCATTATTGAGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487783.5
3UTR-3UTR CCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAAT +
Preference number: 2 (lower is better)
Translates to: FFLVGSRILSRMFGFLETVFRDT*SSAGDN
Trigger: ATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAAC...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp CTCAATAATGGTTTGGATTGTGGTGCCACCACCTTAAAGTTGATGGAGAAGTGTAAAGAGAAATACACCTaGCTCCTGATGGGAGAAATG +
Preference number: 2 (lower is better)
Translates to: LNNGLDCGATTLKLMEKCKEKYT*LLMGEM
Trigger: CATTTCTCCCATCAGGAGGCAGGTGTATTTCTCTTT...ACACTTCTCCATCAACTTTAAGGTGGTGGCACCACAATCCAAACCATTATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487783.5
3UTR-3UTR TCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: FLVGSRILSRMFGFLETPFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLNCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR GCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: FFLVGSRILSRMFGFLETNCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR GCA 72 bp GATCCGGGCTCCTCTGCTCACTGCCCGGGTGGTGCCTaGAATCGTTCTCTCTGCTTGACCACCACTTCCAGC +
Preference number: 3 (lower is better)
Translates to: DPGSSAHCPGGA*NRSLCLTTTSS
Trigger: GCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR GCA 72 bp TGCCTGAAGTGGTCGCACTCAGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGCCTGCAATCGTTCTCT +
Preference number: 3 (lower is better)
Translates to: CLKWSHSGSGLL*SLPGWCLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCCTGAGTGCGACCACTTCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR GCA 72 bp TCAGGATCCGGGCTCCTCTGCTCACTGCCCGGGTGGTaGCTGCAATCGTTCTCTCTGCTTGACCACCACTTC +
Preference number: 3 (lower is better)
Translates to: SGSGLLCSLPGW*LQSFSLLDHHF
Trigger: GAAGTGGTGGTCAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR GCA 72 bp GTCGTGGCCTGTGTATGGCTCACCTCCCCTGCTGGCTaGACTGGTCTGGGGTCAGTGGGTATGGCATGGATT +
Preference number: 3 (lower is better)
Translates to: VVACVWLTSPAG*TGLGSVGMAWI
Trigger: AATCCATGCCATACCCACTGACCCCAGACCAGTGCAGCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR CCA 72 bp GGCCTGTGTATGGCTCACCTCCCCTGCTGGCTGCACTaGTCTGGGGTCAGTGGGTATGGCATGGATTCAGAC +
Preference number: 3 (lower is better)
Translates to: GLCMAHLPCWLH*SGVSGYGMDSD
Trigger: GTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTGCAGCCAGCAGGGGAGGTGAGCCATACACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 3 (lower is better)
Translates to: LPAEIRQVVTGSRALALALSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 3 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp CAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 3 (lower is better)
Translates to: QLRFARWSQGVGPWLWLARRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...GGCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR TCA 72 bp TGCAATCGTTCTCTCTGCTTGACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCT +
Preference number: 3 (lower is better)
Translates to: CNRSLCLTTTSS*DSPGGHRESGP
Trigger: AGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTCCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 3 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 3 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 3 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTTAGAGAAATTCTACTaGCTCCAGCTCCCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: HWSGVSGYGMDSDADRSELEKFY*LQLPLP
Trigger: GGGCAGAGGGAGCTGGAGCAAGTAGAATTTCTCTAA...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp CTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCTTTAGAGAAATTCTACTaGCTCCAGCTCCCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: LGPSQLVFREILLAPAPSLEKFY*LQLPLP
Trigger: GGGCAGAGGGAGCTGGAGCAAGTAGAATTTCTCTAA...AGAGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
3UTR-3UTR CAA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCATCTCTGCAATCCCTTaGCGTGTCAGCAAATGCCAA +
Preference number: 3 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELISAIP*RVSKCQ
Trigger: TTGGCATTTGCTGACACGCAAAGGGATTGCAGAGAT...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432700.5
3UTR-3UTR CAA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGTTCACTCCCAATGGTTaGTGTGGCTTCGTAATAATT +
Preference number: 3 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRFTPNG*CGFVII
Trigger: AATTATTACGAAGCCACACAAACCATTGGGAGTGAA...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTTTAGAGAAATTCTACTaGCTCCAGCTCCCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: NLLGPSQLVFREILLAPALEKFY*LQLPLP
Trigger: GGGCAGAGGGAGCTGGAGCAAGTAGAATTTCTCTAA...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
3UTR CCA 72 bp CATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAATGGCCATGGCTCATTA +
Preference number: 3 (lower is better)
Translates to: HTLQDVWVFRDT*SSAGDNGHGSL
Trigger: TAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR CCA 72 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTaGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: FLGRFSHTLQDV*VFRDTWSSAGD
Trigger: GTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCAAGGCAGGGTCCTTTaGTCCTCAATAATGGTTTGG +
Preference number: 3 (lower is better)
Translates to: NLLGPSQLVFREILLAPAQGRVL*SSIMVW
Trigger: CCAAACCATTATTGAGGACAAAAGGACCCTGCCTTG...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487783.5
3UTR TCA 72 bp TTGTGGTGCCACCACCTTAAAGTTGATGGAGAAGTGTaGGCAAGTGCCAAAGAGAAATACACCTGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: LWCHHLKVDGEV*ASAKEKYTCLL
Trigger: CAGGAGGCAGGTGTATTTCTCTTTGGCACTTGCTCACACTTCTCCATCAACTTTAAGGTGGTGGCACCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487783.5
3UTR-3UTR CAA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACTTCACTCCCAATGGTTaGTGTGGCTTCGTAATAATT +
Preference number: 3 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYFTPNG*CGFVII
Trigger: AATTATTACGAAGCCACACAAACCATTGGGAGTGAA...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGGCCACCACCTTAAAGTaGATGGAGAAGTGTGAGCAA +
Preference number: 3 (lower is better)
Translates to: LISWAPASWYLEKFYLLQATTLK*MEKCEQ
Trigger: TTGCTCACACTTCTCCATCAACTTTAAGGTGGTGGC...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487783.5
3UTR-3UTR CAA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACAGCAGATGCAGACTTaGCCCCCTCATGCAAGTGCT +
Preference number: 3 (lower is better)
Translates to: FFLVGSRILSRMFGFLETQQMQT*PPHASA
Trigger: AGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCTG...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCTTTCAGTTGAGGGATaGAATGTTTTTCCTTGCTAT +
Preference number: 3 (lower is better)
Translates to: CKWCQNKTSKGHDARGSALSVEG*NVFPCY
Trigger: ATAGCAAGGAAAAACATTCAATCCCTCAACTGAAAG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487355.5
3UTR CCA 72 bp TTTGCCTCCAGAACTGTGAGAAAATACATCAGTTGTTaGAGCCACCCAGCCTGTGGCGTTTTACTAAGGCAT +
Preference number: 3 (lower is better)
Translates to: FASRTVRKYISC*SHPACGVLLRH
Trigger: ATGCCTTAGTAAAACGCCACAGGCTGGGTGGCTCCAACAACTGATGTATTTTCTCACAGTTCTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531195.1
3UTR-3UTR CAA 90 bp GTGGCCTCTTCAGTAAAGCGTTTCTTTTCTTGGAATTTTTGCCTCCAGAACTGTGAGAAAATACATCAGTaGTTGGAGCCACCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: VASSVKRFFSWNFCLQNCEKIHQ*LEPPSL
Trigger: CAGGCTGGGTGGCTCCAACAACTGATGTATTTTCTC...ACAGTTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTTACTGAAGAGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531195.1
3UTR-3UTR CAA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 3 (lower is better)
Translates to: FLVGSRILSRMFGFLETPRRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 3 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR-3UTR CAA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 3 (lower is better)
Translates to: FFLVGSRILSRMFGFLETPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LPAEIRQVVTGSRALALAGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTCTGAGATTCGCCAGGTaGTCACAGGGAGTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPAEIRQVVTGSRALALALRFAR*SQGVGP
Trigger: GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAG...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCCTGGCTGCACTGGTCTaGGGTCAGTGGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: QLRFARWSQGVGPWLWLALAALV*GQWVWH
Trigger: ATGCCATACCCACTGACCCCAGACCAGTGCAGCCAG...GGCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPAEIRQVVTGSRALALATTTSS*DSPGGH
Trigger: GTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGT...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: PAEIRQVVTGSRALALACQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...GCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTCCCTGCTGGCTGCACTaGTCTGGGGTCAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLPCWLH*SGVSGY
Trigger: ATACCCACTGACCCCAGACCAGTGCAGCCAGCAGGG...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGACCAGCAAGGGACATaGTGCCAGAGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDDQQGT*CQRQRQ
Trigger: CTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTTGCCCGGGTGGTGCCTaGAATCGTTCTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLCPGGA*NRSLCL
Trigger: CAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCA...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGCTGAGATTCGCCAGGTaGTCACAGGGAGTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQLRFAR*SQGVGP
Trigger: GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAG...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACGACCAGCAAGGGACATaGTGCCAGAGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDDQQGT*CQRQRQ
Trigger: CTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTC...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR TCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCAAGGAAGATGCCTaGAGTGGTCGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPAEIRQVVTGSRALALACKEDA*SGRTQD
Trigger: ATCCTGAGTGCGACCACTTCAGGCATCTTCCTTGCA...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTTGACCACCACTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: LDHHFQLRFARWSQGVGPQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCAAAGCGTTTCTTTTCTaGGTCCATGGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAEIRQVVTGSRALALACKAFLF*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGAAAAGAAACGCTTT...GCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LPAEIRQVVTGSRALALAGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PAEIRQVVTGSRALALACRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...GCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LPAEIRQVVTGSRALALAACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACCACGATGCTGGTGGTaGTCCCAGTCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSPRCWW*SQSQQT
Trigger: CGTCTGCTGTGACTGGGATCACCACCAGCATCGTGG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCCACGATGCTGGTGGTaGTCCCAGTCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDPRCWW*SQSQQT
Trigger: CGTCTGCTGTGACTGGGATCACCACCAGCATCGTGG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
ENST00000487355.5
CDS-3UTR TCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDTTTSS*DSPGGH
Trigger: GTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGT...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QLRFARWSQGVGPWLWLAPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...GGCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACTGCCCGGGTGGTGCCTaGAATCGTTCTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDCPGGA*NRSLCL
Trigger: CAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCA...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACTCACTGCCCGGGTGGTaGCTGCAATCGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDSLPGW*LQSFSL
Trigger: CAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGA...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGAAGATGCCTGAAGTaGTCGCACTCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQGRCLK*SHSGSG
Trigger: CCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCC...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGGAAGATGCCTGAAGTaGTCGCACTCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDGRCLK*SHSGSG
Trigger: CCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LPAEIRQVVTGSRALALAPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACGACCAGCAAGGGACATaGTGCCAGAGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYDQQGT*CQRQRQ
Trigger: CTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTC...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCCACGATGCTGGTGGTaGTCCCAGTCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPPRCWW*SQSQQT
Trigger: CGTCTGCTGTGACTGGGATCACCACCAGCATCGTGG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCCCACGATGCTGGTGGTaGTCCCAGTCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: LLGPSQLVFREILLAPAPPRCWW*SQSQQT
Trigger: CGTCTGCTGTGACTGGGATCACCACCAGCATCGTGG...GGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQTTTSS*DSPGGH
Trigger: GTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGT...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSTTTSS*DSPGGH
Trigger: GTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGT...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTTGACCACCACTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGCAATCGTTCTCTCTaGTTGACCACCACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LDHHFQLRFARWSQGVGPCNRSL*LTTTSS
Trigger: GCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCA...GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGTGCCCGGGTGGTGCCTaGAATCGTTCTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQCPGGA*NRSLCL
Trigger: CAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCA...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGTCACTGCCCGGGTGGTaGCTGCAATCGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRSLPGW*LQSFSL
Trigger: CAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGA...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGGGCTCCTCTGCTCACTaGCCGGGTGGTGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEGSSAH*PGGACN
Trigger: ATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCC...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACGGCTCCTCTGCTCACTaGCCGGGTGGTGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYGSSAH*PGGACN
Trigger: ATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCC...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACTCTACGTGGGCCCCTTaGATGGCCACCACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDSTWAP*MATTFL
Trigger: GAGAAAAGTGGTGGCCATCCAAGGGGCCCACGTAGA...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCATGCTCACTGCCCGGGTaGTGCCTGCAATCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSCSLPG*CLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCA...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACTGCTCACTGCCCGGGTaGTGCCTGCAATCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDCSLPG*CLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCA...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACGGAAGATGCCTGAAGTaGTCGCACTCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDGRCLK*SHSGSG
Trigger: CCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCC...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACTGGCTGCACTGGTCTaGGGTCAGTGGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSLAALV*GQWVWH
Trigger: ATGCCATACCCACTGACCCCAGACCAGTGCAGCCAG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCCCCTGCTGGCTGCACTaGTCTGGGGTCAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFPCWLH*SGVSGY
Trigger: ATACCCACTGACCCCAGACCAGTGCAGCCAGCAGGG...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGGTCGTGGCCTGTGTATaGCTCACCTCCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEVVACV*LTSPAG
Trigger: GCCAGCAGGGGAGGTGAGCCATACACAGGCCACGAC...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: LPAEIRQVVTGSRALALAVFRDT*SSAGDN
Trigger: ATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAAC...AGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCCACGATGCTGGTGGTaGTCCCAGTCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYPRCWW*SQSQQT
Trigger: CGTCTGCTGTGACTGGGATCACCACCAGCATCGTGG...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFTTTSS*DSPGGH
Trigger: GTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGT...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACACGTTCTCCAGGCTCTaGGATATACCCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDTFSRL*DIPWNP
Trigger: TGGGTTCCAGGGTATATCTCAGAGCCTGGAGAACGT...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTGCCCGGGTGGTGCCTaGAATCGTTCTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPCPGGA*NRSLCL
Trigger: CAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCA...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTCACTGCCCGGGTGGTaGCTGCAATCGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPSLPGW*LQSFSL
Trigger: CAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGA...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCACTGCCCGGGTGGTaGCTGCAATCGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLGPSQLVFREILLAPAPSLPGW*LQSFSL
Trigger: CAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGA...GGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCCTCTGCTCACTaGCCGGGTGGTGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHGSSAH*PGGACN
Trigger: ATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCC...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACACATGCAAAACAGGATaGTTCCCAGCCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDTCKTG*FPAPPL
Trigger: CAAGGGTGGGGCTGGGAAGCATCCTGTTTTGCATGT...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCATGTCTGATATCTACGTaGGCCCCTTGGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSCLIST*APWMAT
Trigger: GGTGGCCATCCAAGGGGCCCACGTAGATATCAGACA...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCGGAAGATGCCTGAAGTaGTCGCACTCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFGRCLK*SHSGSG
Trigger: CCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCC...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACCTGGTCTGGGGTCAGTaGGTATGGCATGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDLVWGQ*VWHGFR
Trigger: TCTGAATCCATGCCATACCCACTGACCCCAGACCAG...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCTGGCTGCACTGGTCTaGGGTCAGTGGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPLAALV*GQWVWH
Trigger: ATGCCATACCCACTGACCCCAGACCAGTGCAGCCAG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCCTGGCTGCACTGGTCTaGGGTCAGTGGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFLAALV*GQWVWH
Trigger: ATGCCATACCCACTGACCCCAGACCAGTGCAGCCAG...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCCCTGCTGGCTGCACTaGTCTGGGGTCAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYPCWLH*SGVSGY
Trigger: ATACCCACTGACCCCAGACCAGTGCAGCCAGCAGGG...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACCCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGCTCAGCTGGGGACAATaGCCATGGCTCATTACCTGG +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQLSWGQ*PWLITW
Trigger: CCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCTCAGCTGGGGACAATaGCCATGGCTCATTACCTGG +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDLSWGQ*PWLITW
Trigger: CCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGTCTCAACCATGTCTaGTATCTACGTGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQGLNHV*YLRGPL
Trigger: AAGGGGCCCACGTAGATATCAGACATGGTTGAGACC...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR TCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATCCACGATGCTGGTGGTaGTCCCAGTCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHPRCWW*SQSQQT
Trigger: CGTCTGCTGTGACTGGGATCACCACCAGCATCGTGG...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCTGGCTCTGGCTTGCCTaGTGGCACGGATTTCACTCC +
Preference number: 4 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELWLWLA*WHGFHS
Trigger: GGAGTGAAATCCGTGCCATCAGGCAAGCCAGAGCCA...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCTGGCTCTGGCTTGCCTaGTGGCACGGATTTCACTCC +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAWLWLA*WHGFHS
Trigger: GGAGTGAAATCCGTGCCATCAGGCAAGCCAGAGCCA...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGTGCAAGGAAGATGCCTaGAGTGGTCGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRCKEDA*SGRTQD
Trigger: ATCCTGAGTGCGACCACTTCAGGCATCTTCCTTGCA...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLGPSQLVFREILLAPAPQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...GGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000487783.5
ENST00000530895.5
CDS-3UTR GCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGTGCAATCGTTCTCTCTaGTTGACCACCACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQCNRSL*LTTTSS
Trigger: GCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCA...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACTCACTGCCCGGGTGGTaGCTGCAATCGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYSLPGW*LQSFSL
Trigger: CAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGA...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATGGCTCCTCTGCTCACTaGCCGGGTGGTGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNGSSAH*PGGACN
Trigger: ATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCC...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACCAGTGCAAGGAAGATaGCTGAAGTGGTCGCACTCA +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSPVQGR*LKWSHS
Trigger: TGAGTGCGACCACTTCAGGCATCTTCCTTGCACTGG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGAGCAGATGCAGACTTTaGCCCCTCATGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQSRCRL*PLMQVL
Trigger: AAGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCT...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGACATGCAAAACAGGATaGTTCCCAGCCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRTCKTG*FPAPPL
Trigger: CAAGGGTGGGGCTGGGAAGCATCCTGTTTTGCATGT...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAAATTGGCGTTCTGGCTaGTATTGGCACGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSNWRSG*YWHGNW
Trigger: CCAGTTCCCGTGCCAATACCAGCCAGAACGCCAATT...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCTGAGATTCGCCAGGTaGTCACAGGGAGTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNLRFAR*SQGVGP
Trigger: GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCTGCTCACTGCCCGGGTaGTGCCTGCAATCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELCSLPG*CLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCA...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACTGGTCTGGGGTCAGTaGGTATGGCATGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSLVWGQ*VWHGFR
Trigger: TCTGAATCCATGCCATACCCACTGACCCCAGACCAG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGCTGGTCTGGGGTCAGTaGGTATGGCATGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQLVWGQ*VWHGFR
Trigger: TCTGAATCCATGCCATACCCACTGACCCCAGACCAG...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGACCCTGTGTGGCTTCTaGACACTTCCTTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQTLCGF*TLPYVG
Trigger: ACCCACATAAGGAAGTGTCCAGAAGCCACACAGGGT...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397287.6
CDS-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCTGAAATCCGAGGTGTaGGAGGCAGCACTTGGACTA +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDLKSEV*EAALGL
Trigger: TAGTCCAAGTGCTGCCTCCCACACCTCGGATTTCAG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487355.5
CDS-3UTR TCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACTGTTCCCCCATTACATaGACTAGCCTTGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDCSPIT*TSLDFH
Trigger: GTGGAAGTCAAGGCTAGTTCATGTAATGGGGGAACA...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR TCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGACCAGCAAGGGACATaGTGCCAGAGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSADQQGT*CQRQRQ
Trigger: CTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTC...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATTGGCTCTGGCTTGCCTaGTGGCACGGATTTCACTCC +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHWLWLA*WHGFHS
Trigger: GGAGTGAAATCCGTGCCATCAGGCAAGCCAGAGCCA...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCTGCAAGGAAGATGCCTaGAGTGGTCGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFCKEDA*SGRTQD
Trigger: ATCCTGAGTGCGACCACTTCAGGCATCTTCCTTGCA...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGACTCGTATACAAGGTTaGCCACATCCAGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQTRIQG*PHPVQG
Trigger: TCCTTGCACTGGATGTGGTCAACCTTGTATACGAGT...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR TCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000487783.5
ENST00000530895.5
CDS-3UTR TCA 90 bp CACCCAGCCTGTGGCGTTTTACTAAGGCATCCTGAGAAGAGTGATTCACCAGGGCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: HPACGVLLRHPEKSDSPGQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...CCCTGGTGAATCACTCTTCTCAGGATGCCTTAGTAAAACGCCACAGGCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR GCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR GCA 90 bp CTTGACCACCACTTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LDHHFQLRFARWSQGVGPNCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATTGCCCGGGTGGTGCCTaGAATCGTTCTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHCPGGA*NRSLCL
Trigger: CAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCA...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGCTCCTCTGCTCACTaGCCGGGTGGTGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAGSSAH*PGGACN
Trigger: ATTGCAGGCACCACCCGGGCAGTGAGCAGAGGAGCC...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGATCCGGGCTCCTCTaGTCACTGCCCGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPGSGLL*SLPGWC
Trigger: GCACCACCCGGGCAGTGAGCAGAGGAGCCCGGATCC...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCCCAGTGCAAGGAAGATaGCTGAAGTGGTCGCACTCA +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFPVQGR*LKWSHS
Trigger: TGAGTGCGACCACTTCAGGCATCTTCCTTGCACTGG...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAAGCAGATGCAGACTTTaGCCCCTCATGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSSRCRL*PLMQVL
Trigger: AAGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCT...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCACATGCAAAACAGGATaGTTCCCAGCCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFTCKTG*FPAPPL
Trigger: CAAGGGTGGGGCTGGGAAGCATCCTGTTTTGCATGT...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGTTATGTGGGTTCTTCTaGCAGGAGCACCTGCTACCT +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRLCGFF*QEHLLP
Trigger: AGGTAGCAGGTGCTCCTGGCAGAAGAACCCACATAA...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397287.6
CDS-3UTR GCA 90 bp CTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCTGAGGGGCTGGATCTCTaGAATCCCTTTGCGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LGPSQLVFREILLAPAPSEGLDL*NPFACQ
Trigger: CTGACACGCAAAGGGATTGCAGAGATCCAGCCCCTC...AGAGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432700.5
ENST00000530895.5
CDS-3UTR GCA 90 bp CTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCTTGTCCCCCTTGCTTCTaGCTGTATGTCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGPSQLVFREILLAPAPSCPPCF*LYVLAA
Trigger: TGCAGCCAGGACATACAGGCAGAAGCAAGGGGGACA...AGAGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR CCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGTGGTCCTGGTTTTCCTaGTTAGCCCCCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRWSWFS*LAPFLG
Trigger: ACCAAGAAAGGGGGCTAACCAGGAAAACCAGGACCA...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp CTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: LLGPSQLVFREILLAPAPDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...GGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000487783.5
CDS-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTTTTTCTATGGACTCCTaGATCTTCCTCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLFSMDS*IFLLTW
Trigger: CCAAGTCAAGAGGAAGATCCAGGAGTCCATAGAAAA...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR CCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGAAGATGCCTGAAGTaGTCGCACTCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHGRCLK*SHSGSG
Trigger: CCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCC...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATCTGGCTGCACTGGTCTaGGGTCAGTGGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHLAALV*GQWVWH
Trigger: ATGCCATACCCACTGACCCCAGACCAGTGCAGCCAG...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCCCTGCTGGCTGCACTaGTCTGGGGTCAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQPCWLH*SGVSGY
Trigger: ATACCCACTGACCCCAGACCAGTGCAGCCAGCAGGG...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCCCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTCAGCTGGGGACAATaGCCATGGCTCATTACCTGG +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYLSWGQ*PWLITW
Trigger: CCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDVFRDT*SSAGDN
Trigger: ATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAAC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCGGAGGTTGGAGGGGCTaGATCTCTGCAATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELGGWRG*ISAIPL
Trigger: CAAAGGGATTGCAGAGATCCAGCCCCTCCAACCTCC...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432700.5
CDS-3UTR TCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR TCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCTGCAAGGAAGATGCCTaGAGTGGTCGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSACKEDA*SGRTQD
Trigger: ATCCTGAGTGCGACCACTTCAGGCATCTTCCTTGCA...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGACTCGTATACAAGGTTaGCCACATCCAGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQTRIQG*PHPVQG
Trigger: TCCTTGCACTGGATGTGGTCAACCTTGTATACGAGT...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTACGTTCTCCAGGCTCTaGGATATACCCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPTFSRL*DIPWNP
Trigger: TGGGTTCCAGGGTATATCTCAGAGCCTGGAGAACGT...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLGPSQLVFREILLAPAPLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...GGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
CDS-3UTR GCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR GCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR GCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTGCAATCGTTCTCTCTaGTTGACCACCACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPCNRSL*LTTTSS
Trigger: GCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCA...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCTGCAATCGTTCTCTCTaGTTGACCACCACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFCNRSL*LTTTSS
Trigger: GCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCA...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTACCCTTTGTCCCCCTTaGTTCTGCCTGTATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPTLCPP*FCLYVL
Trigger: CAGGACATACAGGCAGAAGCAAGGGGGACAAAGGGT...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGGAGGCTTTGACTGGTaGAAATTTAACAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDGGFDW*KFNNWS
Trigger: GGACCAGTTGTTAAATTTCCACCAGTCAAAGCCTCC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCGTTCTGGCTGGTATTaGCACGGGAACTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQRSGWY*HGNWRT
Trigger: GGTCCTCCAGTTCCCGTGCCAATACCAGCCAGAACG...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATCATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATTGCTCACTGCCCGGGTaGTGCCTGCAATCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNCSLPG*CLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCA...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTGGAAGATGCCTGAAGTaGTCGCACTCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: NLLGPSQLVFREILLAPAGRCLK*SHSGSG
Trigger: CCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCC...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCCCTGCTGGCTGCACTaGTCTGGGGTCAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAPCWLH*SGVSGY
Trigger: ATACCCACTGACCCCAGACCAGTGCAGCCAGCAGGG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCCCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRVFRDT*SSAGDN
Trigger: ATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAAC...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GTGTTGAGAATGAAGGAAGAGCTGCCACAGACATTTGGAAGCTGGCGTGGACTCCAGACATTTGGAAGCTaGCGTGGACTCCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VLRMKEELPQTFGSWRGLQTFGS*RGLPEG
Trigger: CCCTTCTGGGAGTCCACGCCAGCTTCCAAATGTCTG...GAGTCCACGCCAGCTTCCAAATGTCTGTGGCAGCTCTTCCTTCATTCTCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531095.1
CDS-3UTR TCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR TCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AGGAAGAGCTGCCACAGACATTTGGAAGCTGGCGTGGACTCCCAGAAGGGCTGTCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: RKSCHRHLEAGVDSQKGCQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...ACAGCCCTTCTGGGAGTCCACGCCAGCTTCCAAATGTCTGTGGCAGCTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531095.1
CDS-3UTR TCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCGACCAGCAAGGGACATaGTGCCAGAGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTDQQGT*CQRQRQ
Trigger: CTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTC...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: HWSGVSGYGMDSDADRSELQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSALQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR TCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
CDS-3UTR TCA 90 bp CACCCAGCCTGTGGCGTTTTACTAAGGCATCCTGAGAAGAGTGATTCACCAGGGCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: HPACGVLLRHPEKSDSPGLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...CCCTGGTGAATCACTCTTCTCAGGATGCCTTAGTAAAACGCCACAGGCTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR TCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAAAGCGTTTCTTTTCTaGGTCCATGGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAKAFLF*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGAAAAGAAACGCTTT...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR TCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCAAAGCGTTTCTTTTCTaGGTCCATGGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELKAFLF*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGAAAAGAAACGCTTT...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGTGAGCTCTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: LGSVGMAWIQTLIDLSELFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...GAGCTCACTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGCTCCTGATCAAACATaGAAAACAGGATGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRAPDQT*KTGCFP
Trigger: TGGGAAGCATCCTGTTTTGCATGTTTGATCAGGAGC...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACGCTCCTGATCAAACATaGAAAACAGGATGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDAPDQT*KTGCFP
Trigger: TGGGAAGCATCCTGTTTTGCATGTTTGATCAGGAGC...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCGTGGGCCCCTTGGATaGCCACCACTTTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGRGPLG*PPLFSA
Trigger: GGCAGAGAAAAGTGGTGGCCATCCAAGGGGCCCACG...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCGTTCTGGCTGGTATTaGCACGGGAACTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSARSGWY*HGNWRT
Trigger: GGTCCTCCAGTTCCCGTGCCAATACCAGCCAGAACG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGAGCACTGACTATAATTaGCGTTCTGGCTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRSTDYN*RSGWYW
Trigger: CCAATACCAGCCAGAACGCCAATTATAGTCAGTGCT...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACTTTCACAATATTGGTTaGGATCCCATCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDFHNIG*DPITPS
Trigger: GGAAGGAGTGATGGGATCCCAACCAATATTGTGAAA...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCAGAAGCCAGCTATTCTaGATCTACCCTTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPRSQLF*IYPFPQ
Trigger: CTGGGGAAAAGGGTAGATCCAGAATAGCTGGCTTCT...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR CCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSARPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCTGAGATTCGCCAGGTaGTCACAGGGAGTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPLRFAR*SQGVGP
Trigger: GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCCTGAGATTCGCCAGGTaGTCACAGGGAGTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTLRFAR*SQGVGP
Trigger: GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAG...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTTGCTCACTGCCCGGGTaGTGCCTGCAATCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSACSLPG*CLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCA...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCATCAGTGGGTATGGCATaGATTCAGACGCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSSVGMA*IQTLID
Trigger: ATCTATCAGCGTCTGAATCCATGCCATACCCACTGA...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCTGGCTGCACTGGTCTaGGGTCAGTGGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSALAALV*GQWVWH
Trigger: ATGCCATACCCACTGACCCCAGACCAGTGCAGCCAG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCGTTTTTAGAGACACCTaGTCCTCAGCTGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFVFRDT*SSAGDN
Trigger: ATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAAC...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: LLGPSQLVFREILLAPAPQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...GGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
CDS-3UTR TCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATTGCAAGGAAGATGCCTaGAGTGGTCGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNCKEDA*SGRTQD
Trigger: ATCCTGAGTGCGACCACTTCAGGCATCTTCCTTGCA...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACCCTGCTACCTTCACCTaGTATTCTAATTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDPATFT*YSNSSL
Trigger: CAAAGAAGAATTAGAATATCAGGTGAAGGTAGCAGG...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397287.6
CDS-3UTR TCA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCAGCAGCCAGGTCACTaGGAGACTTTCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: LISWAPASWYLEKFYLLQQQPGH*ETFHGA
Trigger: AGCTCCATGGAAAGTCTCTCAGTGACCTGGCTGCTG...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000487783.5
ENST00000530895.5
CDS-3UTR TCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTAAGTGTCTGTCTTGGTaGATTCACTGGTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPKCLSW*IHWCCA
Trigger: AGCACAGCACCAGTGAATTCACCAAGACAGACACTT...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR GCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQNCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDLFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR GCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTTCACTGCCCGGGTGGTaGCTGCAATCGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGSLPGW*LQSFSL
Trigger: CAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGA...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCCAGTGCAAGGAAGATaGCTGAAGTGGTCGCACTCA +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQPVQGR*LKWSHS
Trigger: TGAGTGCGACCACTTCAGGCATCTTCCTTGCACTGG...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATACATGCAAAACAGGATaGTTCCCAGCCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNTCKTG*FPAPPL
Trigger: CAAGGGTGGGGCTGGGAAGCATCCTGTTTTGCATGT...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGGAGGGGCTGGATCTCTaGAATCCCTTTGCGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LISWAPASWYLEKFYLLQEGLDL*NPFACQ
Trigger: CTGACACGCAAAGGGATTGCAGAGATCCAGCCCCTC...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432700.5
ENST00000530895.5
CDS-3UTR GCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACTCCTTGCTATCTAGATaGTCATCTCAAGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDSLLSR*SSQGSF
Trigger: GAAGCTTCCTTGAGATGAGCATCTAGATAGCAAGGA...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487355.5
CDS-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCGTGGGCCCCTTGGATaGCCACCACTTTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPRGPLG*PPLFSA
Trigger: GGCAGAGAAAAGTGGTGGCCATCCAAGGGGCCCACG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATAATTGGCGTTCTGGCTaGTATTGGCACGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNNWRSG*YWHGNW
Trigger: CCAGTTCCCGTGCCAATACCAGCCAGAACGCCAATT...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACTTTTCTATGGACTCCTaGATCTTCCTCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: KTRPARDMMPEAAPVELDFSMDS*IFLLTW
Trigger: CCAAGTCAAGAGGAAGATCCAGGAGTCCATAGAAAA...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR CCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGATTTCACTCCCAATaGTTTGTGTGGCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSGFHSQ*FVWLRN
Trigger: ATTACGAAGCCACACAAACCATTGGGAGTGAAATCC...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGATTTCACTCCCAATaGTTTGTGTGGCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRGFHSQ*FVWLRN
Trigger: ATTACGAAGCCACACAAACCATTGGGAGTGAAATCC...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGATTTCACTCCCAATaGTTTGTGTGGCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQGFHSQ*FVWLRN
Trigger: ATTACGAAGCCACACAAACCATTGGGAGTGAAATCC...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTTGCTCACTGCCCGGGTaGTGCCTGCAATCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGCSLPG*CLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCA...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCTGGTCTGGGGTCAGTaGGTATGGCATGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNLVWGQ*VWHGFR
Trigger: TCTGAATCCATGCCATACCCACTGACCCCAGACCAG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGGGAGGTTGGAGGGGCTaGATCTCTGCAATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LISWAPASWYLEKFYLLQGGWRG*ISAIPL
Trigger: CAAAGGGATTGCAGAGATCCAGCCCCTCCAACCTCC...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432700.5
ENST00000530895.5
CDS-3UTR TCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGTCTCAACCATGTCTaGTATCTACGTGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAGLNHV*YLRGPL
Trigger: AAGGGGCCCACGTAGATATCAGACATGGTTGAGACC...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR TCA 90 bp CTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCTCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: LGPSQLVFREILLAPAPSQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...AGAGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
CDS-3UTR TCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTGGCTCTGGCTTGCCTaGTGGCACGGATTTCACTCC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPWLWLA*WHGFHS
Trigger: GGAGTGAAATCCGTGCCATCAGGCAAGCCAGAGCCA...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATACTCGTATACAAGGTTaGCCACATCCAGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHTRIQG*PHPVQG
Trigger: TCCTTGCACTGGATGTGGTCAACCTTGTATACGAGT...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AACGCTTTACACCAGTGTCTTCAAAATCTGAGTCCATGGTGCCAGCAGCCAGGTAGTGTCTTCAAAATCTaGGTCCATGGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NALHQCLQNLSPWCQQPGSVFKI*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGATTTTGAAGACACT...ACCTGGCTGCTGGCACCATGGACTCAGATTTTGAAGACACTGGTGTAAAGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530895.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLGPSQLVFREILLAPAPNCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...GGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGTGCAATCGTTCTCTCTaGTTGACCACCACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQCNRSL*LTTTSS
Trigger: GCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCA...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGAGCAGATGCAGACTTTaGCCCCTCATGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQSRCRL*PLMQVL
Trigger: AAGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCT...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGTCTGCCAGGAGCACCTaGTACCTTCACCTGATATTC +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQSARST*YLHLIF
Trigger: GAATATCAGGTGAAGGTAGCAGGTGCTCCTGGCAGA...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397287.6
CDS-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATTGGTCCTGGTTTTCCTaGTTAGCCCCCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNWSWFS*LAPFLG
Trigger: ACCAAGAAAGGGGGCTAACCAGGAAAACCAGGACCA...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCGGATTTCACTCCCAATaGTTTGTGTGGCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFGFHSQ*FVWLRN
Trigger: ATTACGAAGCCACACAAACCATTGGGAGTGAAATCC...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACTGAGATTCGCCAGGTaGTCACAGGGAGTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLLRFAR*SQGVGP
Trigger: GGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGAGAAACCTCGGTGGCTaGGGTAACCAAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LISWAPASWYLEKFYLLQRNLGG*GNQARK
Trigger: CTTCCTTGCTTGGTTACCCCAGCCACCGAGGTTTCT...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR CCA 90 bp ATTTTTGCCTCCAGAACTGTGAGAAAATACATCAGTTGTTGGAGCCACCCAGCCGAGCCACCCAGCCTGTaGCGTTTTACTAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: IFASRTVRKYISCWSHPAEPPSL*RFTKAS
Trigger: GGATGCCTTAGTAAAACGCCACAGGCTGGGTGGCTC...GGCTGGGTGGCTCCAACAACTGATGTATTTTCTCACAGTTCTGGAGGCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR TCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATTCTCTTGAAAGAGTGTaGGCAAGATCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHSLERV*ARSSCS
Trigger: AGAACAGCTGGATCTTGCTCACACTCTTTCAAGAGA...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTTGCAAGGAAGATGCCTaGAGTGGTCGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGCKEDA*SGRTQD
Trigger: ATCCTGAGTGCGACCACTTCAGGCATCTTCCTTGCA...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGACTCGTATACAAGGTTaGCCACATCCAGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQTRIQG*PHPVQG
Trigger: TCCTTGCACTGGATGTGGTCAACCTTGTATACGAGT...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATACTCGTATACAAGGTTaGCCACATCCAGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNTRIQG*PHPVQG
Trigger: TCCTTGCACTGGATGTGGTCAACCTTGTATACGAGT...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGTTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTAAAGCGTTTCTTTTCTaGGTCCATGGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAKAFLF*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGAAAAGAAACGCTTT...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGAAAGCGTTTCTTTTCTaGGTCCATGGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LISWAPASWYLEKFYLLQKAFLF*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGAAAAGAAACGCTTT...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000487783.5
CDS-3UTR TCA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGTGTCCTGGCTGCAAGTaGTGCTTCTGCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: LISWAPASWYLEKFYLLQCPGCK*CFCFNF
Trigger: GAAGTTGAAGCAGAAGCATCACTTGCAGCCAGGACA...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR GCA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: LISWAPASWYLEKFYLLQFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYLFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTTGCAATCGTTCTCTCTaGTTGACCACCACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSACNRSL*LTTTSS
Trigger: GCTGGAAGTGGTGGTCAAGCAGAGAGAACGATTGCA...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCAGTGCAAGGAAGATaGCTGAAGTGGTCGCACTCA +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGPVQGR*LKWSHS
Trigger: TGAGTGCGACCACTTCAGGCATCTTCCTTGCACTGG...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTAGCAGATGCAGACTTTaGCCCCTCATGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSASRCRL*PLMQVL
Trigger: AAGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCT...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTAGAAGTGTGAGCAAGTaGCAAAGAGAAATACACCTG +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPRSVSK*QREIHL
Trigger: CAGGTGTATTTCTCTTTGGCACTTGCTCACACTTCT...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR GCA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTTGGTTTGGATTGTGGTaGCACCACCTTAAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPWFGLW*HHLKVD
Trigger: ATCAACTTTAAGGTGGTGGCACCACAATCCAAACCA...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR CCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGAGGCTTTGACTGGTaGAAATTTAACAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHGGFDW*KFNNWS
Trigger: GGACCAGTTGTTAAATTTCCACCAGTCAAAGCCTCC...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTTATTGGCACGGGAACTaGAGGACCTCCTTAACTCCA +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAYWHGN*RTSLTP
Trigger: TGGAGTTAAGGAGGTCCTCCAGTTCCCGTGCCAATA...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACTTTTCTATGGACTCCTaGATCTTCCTCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYFSMDS*IFLLTW
Trigger: CCAAGTCAAGAGGAAGATCCAGGAGTCCATAGAAAA...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACGGATTTCACTCCCAATaGTTTGTGTGGCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYGFHSQ*FVWLRN
Trigger: ATTACGAAGCCACACAAACCATTGGGAGTGAAATCC...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AACGCTTTACACCAGTGTCTTCAAAATCTGAGTCCATGGTGCCAGCAGCCAGGTCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: NALHQCLQNLSPWCQQPGQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...ACCTGGCTGCTGGCACCATGGACTCAGATTTTGAAGACACTGGTGTAAAGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530895.5
CDS-3UTR TCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACATGGCTCTGGCTTGCCTaGTGGCACGGATTTCACTCC +
Preference number: 4 (lower is better)
Translates to: FFLVGSRILSRMFGFLETWLWLA*WHGFHS
Trigger: GGAGTGAAATCCGTGCCATCAGGCAAGCCAGAGCCA...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAACCACCACTTCCAGCTaGGATTCGCCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FFLVGSRILSRMFGFLETTTTSS*DSPGGH
Trigger: GTGACCACCTGGCGAATCTCAGCTGGAAGTGGTGGT...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCTTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCACGTTCTCCAGGCTCTaGGATATACCCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTTFSRL*DIPWNP
Trigger: TGGGTTCCAGGGTATATCTCAGAGCCTGGAGAACGT...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTAAAGCGTTTCTTTTCTaGGTCCATGGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGKAFLF*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGAAAAGAAACGCTTT...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCATTCTGTCAAGTACTaGCTGTGTTCCCCCATTACA +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNHSVKY*LCSPIT
Trigger: TGTAATGGGGGAACACAGGCAGTACTTGACAGAATG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR GCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTAGCAGGATTTGCAGATaGACTGGGCTGACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPSRICR*TGLTLS
Trigger: GGAGAGAGTCAGCCCAGTGCATCTGCAAATCCTGCT...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGCCAGACTCGTCCCTaGTGTAAATGGTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPGQTRP*CKWCQN
Trigger: GTTTTGGCACCATTTACAGCAGGGACGAGTCTGGCC...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTAGCAGATGCAGACTTTaGCCCCTCATGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGSRCRL*PLMQVL
Trigger: AAGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCT...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCACATGCAAAACAGGATaGTTCCCAGCCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: FLISWAPASWYLEKFYLLTCKTG*FPAPPL
Trigger: CAAGGGTGGGGCTGGGAAGCATCCTGTTTTGCATGT...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGGCTCCTGATCAAACATaGAAAACAGGATGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQAPDQT*KTGCFP
Trigger: TGGGAAGCATCCTGTTTTGCATGTTTGATCAGGAGC...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTTCCAAATCTGTGTCTTaGACTCTATGCCCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: NLLGPSQLVFREILLAPASKSVS*TLCPSV
Trigger: GACACTTGGGCATAGAGTGCAAGACACAGATTTGGA...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR CCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCAGACTTACACAGCATaGAAAAACCCTACTTTAGTA +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPQTYTA*KNPTLV
Trigger: TACTAAAGTAGGGTTTTTCCATGCTGTGTAAGTCTG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCATAATTTCACAATATTaGTTGGGATCCCATCACTCC +
Preference number: 4 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPIISQY*LGSHHS
Trigger: GGAGTGATGGGATCCCAACCAATATTGTGAAATTAT...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGAAACATAACAACTTCTaGTTTCAGTCTCACAACTTC +
Preference number: 4 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQKHNNF*FQSHNF
Trigger: GAAGTTGTGAGACTGAAACCAGAAGTTGTTATGTTT...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTAGAAGCCAGCTATTCTaGATCTACCCTTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSARSQLF*IYPFPQ
Trigger: CTGGGGAAAAGGGTAGATCCAGAATAGCTGGCTTCT...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACAACAGAACCACTATGTaGAAAGAAGCCAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYNRTTM*KEASYS
Trigger: AGAATAGCTGGCTTCTTTCCACATAGTGGTTCTGTT...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GGTGGCCTCTTCAGTAAAGCGTTTCTTTTCTTGGAATTTTTGCCTCCAGAACTGGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: GGLFSKAFLFLEFLPPELDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...CAGTTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTTACTGAAGAGGCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR CCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATTTTTCTATGGACTCCTaGATCTTCCTCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHFSMDS*IFLLTW
Trigger: CCAAGTCAAGAGGAAGATCCAGGAGTCCATAGAAAA...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGATTTCACTCCCAATaGTTTGTGTGGCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHGFHSQ*FVWLRN
Trigger: ATTACGAAGCCACACAAACCATTGGGAGTGAAATCC...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTATGCTCACTGCCCGGGTaGTGCCTGCAATCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLCSLPG*CLQSFS
Trigger: AGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCA...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGGAAGATGCCTGAAGTaGTCGCACTCAGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLGRCLK*SHSGSG
Trigger: CCCGGATCCTGAGTGCGACCACTTCAGGCATCTTCC...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCCTGGTCTGGGGTCAGTaGGTATGGCATGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTLVWGQ*VWHGFR
Trigger: TCTGAATCCATGCCATACCCACTGACCCCAGACCAG...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCTGGTCTGGGGTCAGTaGGTATGGCATGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPLVWGQ*VWHGFR
Trigger: TCTGAATCCATGCCATACCCACTGACCCCAGACCAG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FLISWAPASWYLEKFYLLWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGGGACAATGGCCATaGCTCATTACCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTWGQWP*LITWPS
Trigger: TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCA...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCTCCAGTCACTGACCTaGCTGGAAGGGTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: FLISWAPASWYLEKFYLLLQSLT*LEGFVF
Trigger: AAAAACGAACCCTTCCAGTCAGGTCAGTGACTGGAG...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
CDS-3UTR TCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCTTTCAGTTGAGGGATTaGATGTTTTTCCTTGCTATC +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAFQLRD*MFFLAI
Trigger: GATAGCAAGGAAAAACATTCAATCCCTCAACTGAAA...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487355.5
CDS-3UTR GCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNNCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQNCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQLFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: NLLGPSQLVFREILLAPALFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCAGCAGATGCAGACTTTaGCCCCTCATGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTSRCRL*PLMQVL
Trigger: AAGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCT...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCAGCAGATGCAGACTTTaGCCCCTCATGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FLISWAPASWYLEKFYLLSRCRL*PLMQVL
Trigger: AAGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCT...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTATCTACGTGGGCCCCTTaGATGGCCACCACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLSTWAP*MATTFL
Trigger: GAGAAAAGTGGTGGCCATCCAAGGGGCCCACGTAGA...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTATTGGCACGGGAACTaGAGGACCTCCTTAACTCCA +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPYWHGN*RTSLTP
Trigger: TGGAGTTAAGGAGGTCCTCCAGTTCCCGTGCCAATA...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATTTTCACAATATTGGTTaGGATCCCATCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNFHNIG*DPITPS
Trigger: GGAAGGAGTGATGGGATCCCAACCAATATTGTGAAA...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACATCTGCCTCATCCCTaGGCAATTCAGCCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLHLPHP*AIQPQS
Trigger: TGACTGCGGCTGAATTGCCCAGGGATGAGGCAGATG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGTTTTCTATGGACTCCTaGATCTTCCTCTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: GSRILSRMFGFLETPGPQFSMDS*IFLLTW
Trigger: CCAAGTCAAGAGGAAGATCCAGGAGTCCATAGAAAA...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCGTCCCTGCTGTAAATaGTGCCAAAACAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPRPCCK*CQNKTS
Trigger: GCTGGTCTTGTTTTGGCACCATTTACAGCAGGGACG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACTCAGCTGGGGACAATaGCCATGGCTCATTACCTGG +
Preference number: 4 (lower is better)
Translates to: FFLVGSRILSRMFGFLETLSWGQ*PWLITW
Trigger: CCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCGGACACTTCCTTATGTaGGTTCTTCTGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTGHFLM*VLLPGA
Trigger: TGCTCCTGGCAGAAGAACCCACATAAGGAAGTGTCC...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397287.6
CDS-3UTR TCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTGTTCCCCCATTACATaGACTAGCCTTGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPCSPIT*TSLDFH
Trigger: GTGGAAGTCAAGGCTAGTTCATGTAATGGGGGAACA...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR TCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCCTGGATCTTCCTCTTaGCTTGGGGAAACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPPGSSS*LGETLS
Trigger: TGAAAGAGTTTCCCCAAGTCAAGAGGAAGATCCAGG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTATGCAAGGAAGATGCCTaGAGTGGTCGCACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLCKEDA*SGRTQD
Trigger: ATCCTGAGTGCGACCACTTCAGGCATCTTCCTTGCA...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAACGTTCTCCAGGCTCTaGGATATACCCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: FFLVGSRILSRMFGFLETTFSRL*DIPWNP
Trigger: TGGGTTCCAGGGTATATCTCAGAGCCTGGAGAACGT...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp GTGGCCTCTTCAGTAAAGCGTTTCTTTTCTTGGAATTTTTGCCTCCAGAACTGTAGTGTCTTCAAAATCTaGGTCCATGGTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VASSVKRFFSWNFCLQNCSVFKI*VHGASS
Trigger: GCTGCTGGCACCATGGACTCAGATTTTGAAGACACT...ACAGTTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTTACTGAAGAGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR GCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCATTCTGTCAAGTACTaGCTGTGTTCCCCCATTACA +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGHSVKY*LCSPIT
Trigger: TGTAATGGGGGAACACAGGCAGTACTTGACAGAATG...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR GCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTAACTGCTCATCTTTCTaGTGCACATATTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSANCSSF*CTYSSS
Trigger: TGAGGACGAATATGTGCAGCAGAAAGATGAGCAGTT...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSALFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACCAGTGCAAGGAAGATaGCTGAAGTGGTCGCACTCA +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLPVQGR*LKWSHS
Trigger: TGAGTGCGACCACTTCAGGCATCTTCCTTGCACTGG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTGCTCCTGATCAAACATaGAAAACAGGATGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGAPDQT*KTGCFP
Trigger: TGGGAAGCATCCTGTTTTGCATGTTTGATCAGGAGC...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCGTGTCTTGCACTCTATaGCCAAGTGTCTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FLISWAPASWYLEKFYLLVSCTL*PSVCLG
Trigger: ACCAAGACAGACACTTGGGCATAGAGTGCAAGACAC...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR GCA 90 bp AGGCAGGGTCCTTTTGTCCTCAATAATGGTTTGGATTGTGGTGCCACCACCTTAAAAGAGAAATACACCTaGCTCCTGATGGGAGAAATG +
Preference number: 4 (lower is better)
Translates to: RQGPFVLNNGLDCGATTLKEKYT*LLMGEM
Trigger: CATTTCTCCCATCAGGAGGCAGGTGTATTTCTCTTT...TAAGGTGGTGGCACCACAATCCAAACCATTATTGAGGACAAAAGGACCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR GCA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCTTGAATGTTTTTCCTTaGTATCTAGATGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: CKWCQNKTSKGHDARGSALNVFP*YLDAHL
Trigger: GAGATGAGCATCTAGATAGCAAGGAAAAACATTCAA...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487355.5
CDS-3UTR CCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTAGCACTGACTATAATTaGCGTTCTGGCTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGSTDYN*RSGWYW
Trigger: CCAATACCAGCCAGAACGCCAATTATAGTCAGTGCT...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAGATTTGCAGATGCACTaGGCTGACTCTCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: FFLVGSRILSRMFGFLETDLQMH*ADSLPE
Trigger: TTCCGGGAGAGAGTCAGCCCAGTGCATCTGCAAATC...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTTCAGTGGGTATGGCATaGATTCAGACGCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: LVGSRILSRMFGFLETPGSVGMA*IQTLID
Trigger: ATCTATCAGCGTCTGAATCCATGCCATACCCACTGA...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAGCCTGCATTTTGTCGTaGCCTGTGTATGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: FFLVGSRILSRMFGFLETACILS*PVYGSP
Trigger: AGGTGAGCCATACACAGGCCACGACAAAATGCAGGC...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACCATGGCTCATTACCTaGCCTTCAGGGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLPWLIT*PSGFKQ
Trigger: CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATTTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTTTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NLLGPSQLVFREILLAPAFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATCCTTTCAGAACAAATTaGTTCATTAGCAAGCATAGT +
Preference number: 4 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHPFRTN*FISKHS
Trigger: ACTATGCTTGCTAATGAAGCAATTTGTTCTGAAAGG...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR GCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTATTCGTAGAGAGCATCTaGCTCATCCCTGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLFVESI*LIPGQF
Trigger: GAATTGCCCAGGGATGAGGCAGATGCTCTCTACGAA...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGCTCCTGATCAAACATaGAAAACAGGATGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPAPDQT*KTGCFP
Trigger: TGGGAAGCATCCTGTTTTGCATGTTTGATCAGGAGC...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000349314.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCAGTGGGTATGGCATaGATTCAGACGCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTSVGMA*IQTLID
Trigger: ATCTATCAGCGTCTGAATCCATGCCATACCCACTGA...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGAGATATACCCTGTGTaGCTTCTGGACACTTCCTTA +
Preference number: 4 (lower is better)
Translates to: FLVGSRILSRMFGFLETPEIYPV*LLDTSL
Trigger: TAAGGAAGTGTCCAGAAGCCACACAGGGTATATCTC...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397287.6
CDS-3UTR CCA 90 bp TATTTATTTATGTTCCTGTTCGTAAGTGTTGAGAATGAAGGAAGAGCTGCCACAATTTGGAAGCTGGCGTaGACTCCCAGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YLFMFLFVSVENEGRAATIWKLA*TPRRAV
Trigger: CACAGCCCTTCTGGGAGTCCACGCCAGCTTCCAAAT...TGTGGCAGCTCTTCCTTCATTCTCAACACTTACGAACAGGAACATAAATAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531095.1
CDS-3UTR TCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAACTCGTATACAAGGTTaGCCACATCCAGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLTRIQG*PHPVQG
Trigger: TCCTTGCACTGGATGTGGTCAACCTTGTATACGAGT...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTLFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCTCTTCAATACCATTTaGAAGGGCACGAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: FLISWAPASWYLEKFYLLLFNTI*KGTKLF
Trigger: GAAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAG...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACCCTGCTGTAAATGGTaGCAAAACAAGACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLPCCKW*QNKTSK
Trigger: CTTGCTGGTCTTGTTTTGGCACCATTTACAGCAGGG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCGGATTTCACTCCCAATaGTTTGTGTGGCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTGFHSQ*FVWLRN
Trigger: ATTACGAAGCCACACAAACCATTGGGAGTGAAATCC...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp CTCAATAATGGTTTGGATTGTGGTGCCACCACCTTAAAGTTGATGGAGAAGTGTTCCTCAATAATGGTTTaGATTGTGGTGCCACCACCT +
Preference number: 4 (lower is better)
Translates to: LNNGLDCGATTLKLMEKCSSIMV*IVVPPP
Trigger: AGGTGGTGGCACCACAATCCAAACCATTATTGAGGA...ACACTTCTCCATCAACTTTAAGGTGGTGGCACCACAATCCAAACCATTATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR GCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCCTTTCAGAACAAATTaGTTCATTAGCAAGCATAGT +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAPFRTN*FISKHS
Trigger: ACTATGCTTGCTAATGAAGCAATTTGTTCTGAAAGG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTAAACATAACAACTTCTaGTTTCAGTCTCACAACTTC +
Preference number: 4 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAKHNNF*FQSHNF
Trigger: GAAGTTGTGAGACTGAAACCAGAAGTTGTTATGTTT...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCAACAGAACCACTATGTaGAAAGAAGCCAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTNRTTM*KEASYS
Trigger: AGAATAGCTGGCTTCTTTCCACATAGTGGTTCTGTT...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACACGAAGCTTTTCTATaGACTCCTGGATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLHEAFL*TPGSSS
Trigger: AGAGGAAGATCCAGGAGTCCATAGAAAAGCTTCGTG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTATCAGTGGGTATGGCATaGATTCAGACGCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLSVGMA*IQTLID
Trigger: ATCTATCAGCGTCTGAATCCATGCCATACCCACTGA...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
3UTR CAA 72 bp AATAATGGTTTGGATTGTGGTGCCACCACCTTAAAGTaGATGGAGAAGTGTGAGCAAGTGCCAAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: NNGLDCGATTLK*MEKCEQVPKRN
Trigger: ATTTCTCTTTGGCACTTGCTCACACTTCTCCATCAACTTTAAGGTGGTGGCACCACAATCCAAACCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR TCA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCTTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: FLISWAPASWYLEKFYLLFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR TCA 90 bp TCTTCAGTAAAGCGTTTCTTTTCTTGGAATTTTTGCCTCCAGAACTGTGAGAAACAAGGAAGCTTCTCTTaGAAGAGTGTGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: SSVKRFFSWNFCLQNCEKQGSFS*KSVSKI
Trigger: GATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTG...TTTCTCACAGTTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTTACTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR TCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTATTTGCCTGCTGTATATaGGTAATGAGACTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLFACCI*VMRLFF
Trigger: GAAAAACAGTCTCATTACTCATATACAGCAGGCAAA...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR GCA 90 bp GTGGCCTCTTCAGTAAAGCGTTTCTTTTCTTGGAATTTTTGCCTCCAGAACTGTTTTTCTTGGAATTTTTaGCTCCAGAACTGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VASSVKRFFSWNFCLQNCFSWNF*LQNCEK
Trigger: TTTCTCACAGTTCTGGAGGCAAAAATTCCAAGAAAA...ACAGTTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTTACTGAAGAGGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR CCA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACAGACTTACACAGCATaGAAAAACCCTACTTTAGTA +
Preference number: 4 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLQTYTA*KNPTLV
Trigger: TACTAAAGTAGGGTTTTTCCATGCTGTGTAAGTCTG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CCA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAATAATTTCACAATATTaGTTGGGATCCCATCACTCC +
Preference number: 4 (lower is better)
Translates to: FFLVGSRILSRMFGFLETIISQY*LGSHHS
Trigger: GGAGTGATGGGATCCCAACCAATATTGTGAAATTAT...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp CAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTGCCCAGCAGATGCAGACTTaGCCCCCTCATGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: QLRFARWSQGVGPWLWLAQQMQT*PPHASA
Trigger: AGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCTG...GGCAAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS TCA 90 bp AACCCTCTGTGTGGCTCTTTGGGCCTCTGTCTCCCCGTTAAACTCTaGGCATCCGGCAGGGACCCTGCGGTGTTCCCAGCTGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: NPLCGSLGLCLPVKL*ASGRDPAVFPAASP
Trigger: AGGGGATGCAGCTGGGAACACCGCAGGGTCCCTGCCGGATGCTCAGAGTTTAACGGGGAGACAGAGGCCCAAAGAGCCACACAGAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525184.1
CDS-3UTR CAA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCGTTCTGGCTGGTATaGGCACGGGAACTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQAFWLV*ARELED
Trigger: GTCCTCCAGTTCCCGTGCCAATACCAGCCAGAACGC...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp TTCCAGCTGAGATTCGCCAGGTGGTCACAGGGAGTCGGGCCCTGGCTCTGGCTTCAAGGCAGGGTCCTTTaGTCCAAGGAAGCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FQLRFARWSQGVGPWLWLQGRVL*SKEASL
Trigger: AAGAGAAGCTTCCTTGGACAAAAGGACCCTGCCTTG...AAGCCAGAGCCAGGGCCCGACTCCCTGTGACCACCTGGCGAATCTCAGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCAGCAGATGCAGACTTaGCCCCCTCATGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: KTRPARDMMPEAAPVELDQQMQT*PPHASA
Trigger: AGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCTG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCAGCAGATGCAGACTTaGCCCCCTCATGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRQQMQT*PPHASA
Trigger: AGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCTG...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCAGCAGATGCAGACTTaGCCCCCTCATGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPQQMQT*PPHASA
Trigger: AGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCTG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TCTGCTCACTGCCCGGGTGGTGCCTGCAATCGTTCTCTCTGCTTGACCACCACTTTAGAGAAATTCTACTaGCTCCAGCTCCCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SAHCPGGACNRSLCLTTTLEKFY*LQLPLP
Trigger: GGGCAGAGGGAGCTGGAGCAAGTAGAATTTCTCTAA...AGTGGTGGTCAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS CCA 90 bp GTTACCGCGAGGTCTCAACCATGTCTGATATCTACGTGGGCCCCTTaGATGGCCACCACTTTTCTCTGCCCAACCTACCAGCTACAAGAG +
Preference number: 5 (lower is better)
Translates to: VTARSQPCLISTWAP*MATTFLCPTYQLQE
Trigger: CTCTTGTAGCTGGTAGGTTGGGCAGAGAAAAGTGGTGGCCATCCAAGGGGCCCACGTAGATATCAGACATGGTTGAGACCTCGCGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS CCA 90 bp CTACACAAGGTTACCGCGAGGTCTCAACCATGTCTGATATCTACGTaGGCCCCTTGGATGGCCACCACTTTTCTCTGCCCAACCTACCAG +
Preference number: 5 (lower is better)
Translates to: LHKVTARSQPCLIST*APWMATTFLCPTYQ
Trigger: CTGGTAGGTTGGGCAGAGAAAAGTGGTGGCCATCCAAGGGGCCCACGTAGATATCAGACATGGTTGAGACCTCGCGGTAACCTTGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATGCGTTCTGGCTGGTATaGGCACGGGAACTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNAFWLV*ARELED
Trigger: GTCCTCCAGTTCCCGTGCCAATACCAGCCAGAACGC...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCACTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: KTRPARDMMPEAAPVELDLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
ENST00000487355.5
CDS-3UTR CAA 90 bp TCTGCTCACTGCCCGGGTGGTGCCTGCAATCGTTCTCTCTGCTTGACCACCACTAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 5 (lower is better)
Translates to: SAHCPGGACNRSLCLTTTRRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...AGTGGTGGTCAAGCAGAGAGAACGATTGCAGGCACCACCCGGGCAGTGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 5 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDRRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACCCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDPRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGG...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS TCA 90 bp CACCCTTTGTCCCCCTTGCTTCTGCCTGTATGTCCTGGCTGCAAGTaGTGCTTCTGCTTCAACTTCCCAAGTAGTTGTCCCTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: HPLSPLLLPVCPGCK*CFCFNFPSSCPYRY
Trigger: GTACCTGTAGGGACAACTACTTGGGAAGTTGAAGCAGAAGCATCACTTGCAGCCAGGACATACAGGCAGAAGCAAGGGGGACAAAGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR CAA 90 bp GACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGATTTCACAATATTGGTaGGGATCCCATCACTCCTTC +
Preference number: 5 (lower is better)
Translates to: DTWSSAGDNGHGSLPGLQISQYW*GSHHSF
Trigger: GAAGGAGTGATGGGATCCCAACCAATATTGTGAAAT...CTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGCCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp AGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 5 (lower is better)
Translates to: RHLVLSWGQWPWLITWPSRRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...TGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCAGCAGATGCAGACTTaGCCCCCTCATGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: GSRILSRMFGFLETPGPQQQMQT*PPHASA
Trigger: AGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCTG...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: KTRPARDMMPEAAPVELDPRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
CDS-3UTR CAA 90 bp TCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGCCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: SAGDNGHGSLPGLQGSSRPRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGG...CCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp AGGAAGAGCTGCCACAGACATTTGGAAGCTGGCGTGGACTCCCAGAAGGGCTGTCCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: RKSCHRHLEAGVDSQKGCPRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGG...ACAGCCCTTCTGGGAGTCCACGCCAGCTTCCAAATGTCTGTGGCAGCTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531095.1
CDS-3UTR CAA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACCAAGGCAGGGTCCTTTaGTCCAAGGAAGCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYQGRVL*SKEASL
Trigger: AAGAGAAGCTTCCTTGGACAAAAGGACCCTGCCTTG...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCCAAGGCAGGGTCCTTTaGTCCTCAATAATGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LLGPSQLVFREILLAPAPQGRVL*SSIMVW
Trigger: CCAAACCATTATTGAGGACAAAAGGACCCTGCCTTG...GGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR CAA 90 bp CACCCAGCCTGTGGCGTTTTACTAAGGCATCCTGAGAAGAGTGATTCACCAGGGGAGAAAATACATCAGTaGTTGGAGCCACCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: HPACGVLLRHPEKSDSPGEKIHQ*LEPPSL
Trigger: CAGGCTGGGTGGCTCCAACAACTGATGTATTTTCTC...CCCTGGTGAATCACTCTTCTCAGGATGCCTTAGTAAAACGCCACAGGCTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR CAA 90 bp CTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACGAGCTTGTGCAACACTaGATAAACATTGCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LGTMAMAHYLAFRVQAGDELVQH*INIAVF
Trigger: GAAAACAGCAATGTTTATCAAGTGTTGCACAAGCTC...GTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACTCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: KTRPARDMMPEAAPVELDSRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGA...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487355.5
CDS-3UTR CAA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCCCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCCCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTCAGCAGATGCAGACTTaGCCCCCTCATGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAQQMQT*PPHASA
Trigger: AGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCTG...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CTCAGCTGGGGACAATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 5 (lower is better)
Translates to: LSWGQWPWLITWPSGFKQMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...CTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCATTGTCCCCAGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCTGCCACCACCTTAAAGTaGATGGAGAAGTGTGAGCAA +
Preference number: 5 (lower is better)
Translates to: LGPSQLVFREILLAPAPSATTLK*MEKCEQ
Trigger: TTGCTCACACTTCTCCATCAACTTTAAGGTGGTGGC...AGAGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR CAA 90 bp CTCAGCAGGATGGCTCTAGAGATCCGGCCTCCCCCAGTCTCTAAACTGCTTTTCAAAATTTACATGTGGTaGTACCCTCCTTTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: LSRMALEIRPPPVSKLLFKIYMW*YPPFPR
Trigger: TCTGGGGAAAGGAGGGTACAACCACATGTAAATTTT...GAAAAGCAGTTTAGAGACTGGGGGAGGCCGGATCTCTAGAGCCATCCTGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp ATGGCCATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: MAMAHYLAFRVQAGDIYPSRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGA...GGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
ENST00000487355.5
CDS-3UTR CAA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 5 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYRRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 5 (lower is better)
Translates to: CKWCQNKTSKGHDARGSARRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
ENST00000487355.5
CDS-3UTR CAA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACTTCACTCCCAATGGTTaGTGTGGCTTCGTAATAATT +
Preference number: 5 (lower is better)
Translates to: KTRPARDMMPEAAPVELDFTPNG*CGFVII
Trigger: AATTATTACGAAGCCACACAAACCATTGGGAGTGAA...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TGTAAATGGTGCCAAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCCCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: CKWCQNKTSKGHDARGSAPRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGG...GGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTTGGCACCATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000426939.6
ENST00000432700.5
CDS-3UTR CAA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTCCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPPRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGG...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000530895.5
CDS-3UTR CAA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCTGTGCTGGACACCCTTaGTCCCCCTTGCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: FLISWAPASWYLEKFYLLCAGHP*SPLLLP
Trigger: AGGCAGAAGCAAGGGGGACAAAGGGTGTCCAGCACA...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR CAA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGGCCCAAGTGTCTGTCTaGGTGAATTCACTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LISWAPASWYLEKFYLLQAQVSV*VNSLVL
Trigger: CAGCACCAGTGAATTCACCAAGACAGACACTTGGGC...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR CAA 90 bp TCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCCTTTCCAAATCTGTGTCTaGCACTCTATGCCCAAGTGT +
Preference number: 5 (lower is better)
Translates to: SWAPASWYLEKFYLLQLPFQICV*HSMPKC
Trigger: ACACTTGGGCATAGAGTGCAAGACACAGATTTGGAA...AGGGAGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS-3UTR CAA 90 bp GGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATGGCTCATTACTCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: GFLETPGPQLGTMAMAHYSRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGA...GTAATGAGCCATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp CACTGGTCTGGGGTCAGTGGGTATGGCATGGATTCAGACGCTGATAGATCTGAGATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 5 (lower is better)
Translates to: HWSGVSGYGMDSDADRSEMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...CTCAGATCTATCAGCGTCTGAATCCATGCCATACCCACTGACCCCAGACCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397289.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TCAAACGCTTTACACCAGTGTCTTCAAAATCTGAGTCCATGGTGCCAGCAGCCACAAGGCAGGGTCCTTTaGTCCAAGGAAGCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SNALHQCLQNLSPWCQQPQGRVL*SKEASL
Trigger: AAGAGAAGCTTCCTTGGACAAAAGGACCCTGCCTTG...TGGCTGCTGGCACCATGGACTCAGATTTTGAAGACACTGGTGTAAAGCGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530895.5
CDS-3UTR CAA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGTTAGAGAAATTCTACTaGCTCCAGCTCCCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LISWAPASWYLEKFYLLQLEKFY*LQLPLP
Trigger: GGGCAGAGGGAGCTGGAGCAAGTAGAATTTCTCTAA...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000422426.5
ENST00000432700.5
ENST00000472303.1
ENST00000487783.5
ENST00000530895.5
CDS-3UTR CAA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTATCTCTGCAATCCCTTaGCGTGTCAGCAAATGCCAA +
Preference number: 5 (lower is better)
Translates to: NLLGPSQLVFREILLAPAISAIP*RVSKCQ
Trigger: TTGGCATTTGCTGACACGCAAAGGGATTGCAGAGAT...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432700.5
ENST00000530895.5
CDS-3UTR CAA 90 bp AAAACAAGACCAGCAAGGGACATGATGCCAGAGGCAGCGCCAGTGGAGCTGGACCTTTCAGTTGAGGGATaGAATGTTTTTCCTTGCTAT +
Preference number: 5 (lower is better)
Translates to: KTRPARDMMPEAAPVELDLSVEG*NVFPCY
Trigger: ATAGCAAGGAAAAACATTCAATCCCTCAACTGAAAG...GTCCAGCTCCACTGGCGCTGCCTCTGGCATCATGTCCCTTGCTGGTCTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487355.5
CDS-3UTR CAA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LVGSRILSRMFGFLETPGLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp AATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGCTCCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: NLLGPSQLVFREILLAPAPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...AGCTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 5 (lower is better)
Translates to: GSRILSRMFGFLETPGPQRRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATAGAAGGGAAAGTAAGTaGGGTGTGATGTCACGCATA +
Preference number: 5 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNRRESK*GVMSRI
Trigger: TATGCGTGACATCACACCCAACTTACTTTCCCTTCT...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTGGGGACAATGGCCATATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 5 (lower is better)
Translates to: QDVWVFRDTWSSAGDNGHMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...ATGGCCATTGTCCCCAGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: GSRILSRMFGFLETPGPQPRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGG...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS CCA 90 bp AGGGCCAACAAGTTAATGGAAAACAGAGTTTCAGGAGGCTTTGACTaGTGGAAATTTAACAACTGGTCCTGGTTTTCCTGGTTAGCCCCC +
Preference number: 5 (lower is better)
Translates to: RANKLMENRVSGGFD*WKFNNWSWFSWLAP
Trigger: GGGGGCTAACCAGGAAAACCAGGACCAGTTGTTAAATTTCCACCAGTCAAAGCCTCCTGAAACTCTGTTTTCCATTAACTTGTTGGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGTCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: GSRILSRMFGFLETPGPQSRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGA...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: FLVGSRILSRMFGFLETPLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACAGCAGATGCAGACTTaGCCCCCTCATGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLQQMQT*PPHASA
Trigger: AGCACTTGCATGAGGGGGCAAAGTCTGCATCTGCTG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 5 (lower is better)
Translates to: GSRILSRMFGFLETPGPQMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTAGAGAAATTCTACTaGCTCCAGCTCCCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FLGRFSHTLQDVWVFRDTLEKFY*LQLPLP
Trigger: GGGCAGAGGGAGCTGGAGCAAGTAGAATTTCTCTAA...GGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCGTCCTCAATAATGGTTaGGATTGTGGTGCCACCACC +
Preference number: 5 (lower is better)
Translates to: FLISWAPASWYLEKFYLLVLNNG*DCGATT
Trigger: GGTGGTGGCACCACAATCCAAACCATTATTGAGGAC...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS GCA 90 bp ATATACCCTGTGTGGCTTCTGGACACTTCCTTATGTGGGTTCTTCTaGCAGGAGCACCTGCTACCTTCACCTGATATTCTAATTCTTCTT +
Preference number: 5 (lower is better)
Translates to: IYPVWLLDTSLCGFF*QEHLLPSPDILILL
Trigger: AAGAAGAATTAGAATATCAGGTGAAGGTAGCAGGTGCTCCTGGCAGAAGAACCCACATAAGGAAGTGTCCAGAAGCCACACAGGGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397287.6
CDS-3UTR CAA 90 bp CATGGCTCATTACCTGGCCTTCAGGGTTCAAGCAGGGGACATATACCCCTAAATGAGCTTGTGCAACACTaGATAAACATTGCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: HGSLPGLQGSSRGHIPLNELVQH*INIAVF
Trigger: GAAAACAGCAATGTTTATCAAGTGTTGCACAAGCTC...ATTTAGGGGTATATGTCCCCTGCTTGAACCCTGAAGGCCAGGTAATGAGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTTTACATGAACTAGCCTaGACTTCCACTTCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: LVGSRILSRMFGFLETPGLHELA*TSTSEG
Trigger: ACCCTCAGAAGTGGAAGTCAAGGCTAGTTCATGTAA...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp AATAATGGTTTGGATTGTGGTGCCACCACCTTAAAGTTGATGGAGAAGTGTGAGCTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: NNGLDCGATTLKLMEKCELSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...CTCACACTTCTCCATCAACTTTAAGGTGGTGGCACCACAATCCAAACCATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR CAA 90 bp GGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGTTCACTCCCAATGGTTaGTGTGGCTTCGTAATAATT +
Preference number: 5 (lower is better)
Translates to: GSRILSRMFGFLETPGPQFTPNG*CGFVII
Trigger: AATTATTACGAAGCCACACAAACCATTGGGAGTGAA...CTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 5 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp ATTTTTGCCTCCAGAACTGTGAGAAAATACATCAGTTGTTGGAGCCACCCAGCCCCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: IFASRTVRKYISCWSHPAPRKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGG...GGCTGGGTGGCTCCAACAACTGATGTATTTTCTCACAGTTCTGGAGGCAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR CAA 90 bp CCAGCCTGTGGCGTTTTACTAAGGCATCCTGAGAAGAGTGATTCACCAGGGAAGAAAGCGTTTCTTTTCTaGGAATTTTTGCCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: PACGVLLRHPEKSDSPGKKAFLF*EFLPPE
Trigger: TTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTT...CTTCCCTGGTGAATCACTCTTCTCAGGATGCCTTAGTAAAACGCCACAGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR CAA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTTTACATGAACTAGCCTaGACTTCCACTTCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: FLVGSRILSRMFGFLETPLHELA*TSTSEG
Trigger: ACCCTCAGAAGTGGAAGTCAAGGCTAGTTCATGTAA...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTCCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: FLVGSRILSRMFGFLETPPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTCCTCAGCTTTCACTCCCAATGGTTaGTGTGGCTTCGTAATAATT +
Preference number: 5 (lower is better)
Translates to: FSHTLQDVWVFRDTWSSAFTPNG*CGFVII
Trigger: AATTATTACGAAGCCACACAAACCATTGGGAGTGAA...AGCTGAGGACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCCAGTTCACTCCCAATGGTTaGTGTGGCTTCGTAATAATT +
Preference number: 5 (lower is better)
Translates to: LISWAPASWYLEKFYLLQFTPNG*CGFVII
Trigger: AATTATTACGAAGCCACACAAACCATTGGGAGTGAA...CTGGAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 5 (lower is better)
Translates to: LVGSRILSRMFGFLETPGMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTTTTAATCTCCTGGGCCCCAGCCAGCTGGTATTTAGAGAAATTCTACTTGCTCGCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: FLISWAPASWYLEKFYLLARKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGC...GAGCAAGTAGAATTTCTCTAAATACCAGCTGGCTGGGGCCCAGGAGATTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472303.1
ENST00000487783.5
CDS-3UTR CAA 90 bp TTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTGGTTTCACTCCCAATGGTTaGTGTGGCTTCGTAATAATT +
Preference number: 5 (lower is better)
Translates to: LVGSRILSRMFGFLETPGFTPNG*CGFVII
Trigger: AATTATTACGAAGCCACACAAACCATTGGGAGTGAA...ACCAGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACACCTATGAGACTGTTTTTCTaGGTAGGTTCTCGCATACTC +
Preference number: 5 (lower is better)
Translates to: FLVGSRILSRMFGFLETPMRLFF*VGSRIL
Trigger: GAGTATGCGAGAACCTACCAAGAAAAACAGTCTCAT...AGGTGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp CTCAATAATGGTTTGGATTGTGGTGCCACCACCTTAAAGTTGATGGAGAAGTGTGCAAGGAAGCTTCTCTaGAAAGAGTGTGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: LNNGLDCGATTLKLMEKCARKLL*KECEQD
Trigger: ATCTTGCTCACACTCTTTCAAGAGAAGCTTCCTTGC...ACACTTCTCCATCAACTTTAAGGTGGTGGCACCACAATCCAAACCATTATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487783.5
CDS-3UTR CAA 90 bp TCTTCAGTAAAGCGTTTCTTTTCTTGGAATTTTTGCCTCCAGAACTGTGAGAAACTCTCCCGGAAGTATTaGGTGGCCTCTTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: SSVKRFFSWNFCLQNCEKLSRKY*VASSVK
Trigger: CTTTACTGAAGAGGCCACCAAATACTTCCGGGAGAG...TTTCTCACAGTTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTTACTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR CAA 90 bp AGACTGTTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTACCTCTTCAATACCATTaGCAAGGGCACGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: RLFFLVGSRILSRMFGFLPLQYH*QGHEAF
Trigger: AAAAGCTTCGTGCCCTTGCAAATGGTATTGAAGAGG...TAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAACAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS-3UTR CAA 90 bp TCTTCAGTAAAGCGTTTCTTTTCTTGGAATTTTTGCCTCCAGAACTGTGAGAAAAAAATACATCAGTTGTaGGAGCCACCCAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SSVKRFFSWNFCLQNCEKKIHQL*EPPSLW
Trigger: CCACAGGCTGGGTGGCTCCAACAACTGATGTATTTT...TTTCTCACAGTTCTGGAGGCAAAAATTCCAAGAAAAGAAACGCTTTACTGAAGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000531195.1
CDS-3UTR CAA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACAATTTCACAATATTGGTaGGGATCCCATCACTCCTTC +
Preference number: 5 (lower is better)
Translates to: FFLVGSRILSRMFGFLETISQYW*GSHHSF
Trigger: GAAGGAGTGATGGGATCCCAACCAATATTGTGAAAT...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS-3UTR CAA 90 bp TTTTTCTTGGTAGGTTCTCGCATACTCTCCAGGATGTTTGGGTTTTTAGAGACATTCACTCCCAATGGTTaGTGTGGCTTCGTAATAATT +
Preference number: 5 (lower is better)
Translates to: FFLVGSRILSRMFGFLETFTPNG*CGFVII
Trigger: AATTATTACGAAGCCACACAAACCATTGGGAGTGAA...TGTCTCTAAAAACCCAAACATCCTGGAGAGTATGCGAGAACCTACCAAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000349314.6
ENST00000361710.6
ENST00000397287.6
ENST00000397289.6
ENST00000397293.6
ENST00000422426.5
ENST00000432700.5
CDS TCA 72 bp TGTGGCTCTTTGGGCCTCTGTCTCCCCGTTAAACTCTaGGCATCCGGCAGGGACCCTGCGGTGTTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: CGSLGLCLPVKL*ASGRDPAVFPA
Trigger: AGCTGGGAACACCGCAGGGTCCCTGCCGGATGCTCAGAGTTTAACGGGGAGACAGAGGCCCAAAGAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525184.1
CDS CCA 72 bp GTTACCGCGAGGTCTCAACCATGTCTGATATCTACGTaGGCCCCTTGGATGGCCACCACTTTTCTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: VTARSQPCLIST*APWMATTFLCP
Trigger: TGGGCAGAGAAAAGTGGTGGCCATCCAAGGGGCCCACGTAGATATCAGACATGGTTGAGACCTCGCGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS CCA 72 bp AGGTCTCAACCATGTCTGATATCTACGTGGGCCCCTTaGATGGCCACCACTTTTCTCTGCCCAACCTACCAG +
Preference number: 6 (lower is better)
Translates to: RSQPCLISTWAP*MATTFLCPTYQ
Trigger: CTGGTAGGTTGGGCAGAGAAAAGTGGTGGCCATCCAAGGGGCCCACGTAGATATCAGACATGGTTGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS TCA 72 bp TTCTACACAAGGTTACCGCGAGGTCTCAACCATGTCTaGTATCTACGTGGGCCCCTTGGATGGCCACCACTT +
Preference number: 6 (lower is better)
Translates to: FYTRLPRGLNHV*YLRGPLGWPPL
Trigger: AAGTGGTGGCCATCCAAGGGGCCCACGTAGATATCAGACATGGTTGAGACCTCGCGGTAACCTTGTGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS TCA 72 bp TCCCCCTTGCTTCTGCCTGTATGTCCTGGCTGCAAGTaGTGCTTCTGCTTCAACTTCCCAAGTAGTTGTCCC +
Preference number: 6 (lower is better)
Translates to: SPLLLPVCPGCK*CFCFNFPSSCP
Trigger: GGGACAACTACTTGGGAAGTTGAAGCAGAAGCATCACTTGCAGCCAGGACATACAGGCAGAAGCAAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472303.1
CDS TCA 72 bp ACACACCTCTTGGAGGGCAGGGGGAAGGTCAACACCTaGCCTCCTGACTCTGACATTGAAGCAAGAAAGTAT +
Preference number: 6 (lower is better)
Translates to: THLLEGRGKVNT*PPDSDIEARKY
Trigger: ATACTTTCTTGCTTCAATGTCAGAGTCAGGAGGTCAGGTGTTGACCTTCCCCCTGCCCTCCAAGAGGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533061.1
CDS CCA 72 bp AGAATGAAGGAAGAGCTGCCACAGACATTTGGAAGCTaGCGTGGACTCCCAGAAGGGCTGTGTTATTCTCCA +
Preference number: 6 (lower is better)
Translates to: RMKEELPQTFGS*RGLPEGLCYSP
Trigger: TGGAGAATAACACAGCCCTTCTGGGAGTCCACGCCAGCTTCCAAATGTCTGTGGCAGCTCTTCCTTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531095.1
CDS CCA 72 bp AGTGTTGAGAATGAAGGAAGAGCTGCCACAGACATTTaGAAGCTGGCGTGGACTCCCAGAAGGGCTGTGTTA +
Preference number: 6 (lower is better)
Translates to: SVENEGRAATDI*KLAWTPRRAVL
Trigger: TAACACAGCCCTTCTGGGAGTCCACGCCAGCTTCCAAATGTCTGTGGCAGCTCTTCCTTCATTCTCAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531095.1
CDS GCA 72 bp GTGTGGCTTCTGGACACTTCCTTATGTGGGTTCTTCTaGCAGGAGCACCTGCTACCTTCACCTGATATTCTA +
Preference number: 6 (lower is better)
Translates to: VWLLDTSLCGFF*QEHLLPSPDIL
Trigger: TAGAATATCAGGTGAAGGTAGCAGGTGCTCCTGGCAGAAGAACCCACATAAGGAAGTGTCCAGAAGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397287.6
CDS CCA 72 bp GGAGGCTTTGACTGGTGGAAATTTAACAACTGGTCCTaGTTTTCCTGGTTAGCCCCCTTTCTTGGTCCTAAA +
Preference number: 6 (lower is better)
Translates to: GGFDWWKFNNWS*FSWLAPFLGPK
Trigger: TTTAGGACCAAGAAAGGGGGCTAACCAGGAAAACCAGGACCAGTTGTTAAATTTCCACCAGTCAAAGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS CAA 90 bp ATTCTGTCAAGTACTGCCTGTGTTCCCCCATTACATGAACTAGCCTaGACTTCCACTTCTGAGGGTATTAAAGCAGACTTACACAGCATG +
Preference number: 6 (lower is better)
Translates to: ILSSTACVPPLHELA*TSTSEGIKADLHSM
Trigger: CATGCTGTGTAAGTCTGCTTTAATACCCTCAGAAGTGGAAGTCAAGGCTAGTTCATGTAATGGGGGAACACAGGCAGTACTTGACAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS CAA 90 bp ACAATATTGGTTGGGATCCCATCACTCCTTCCTCTAATTGGGCTTTaGATTCCTCTTTCATTCTGTCAAGTACTGCCTGTGTTCCCCCAT +
Preference number: 6 (lower is better)
Translates to: TILVGIPSLLPLIGL*IPLSFCQVLPVFPH
Trigger: ATGGGGGAACACAGGCAGTACTTGACAGAATGAAAGAGGAATCAAAAGCCCAATTAGAGGAAGGAGTGATGGGATCCCAACCAATATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS CAA 72 bp AGTACTGCCTGTGTTCCCCCATTACATGAACTAGCCTaGACTTCCACTTCTGAGGGTATTAAAGCAGACTTA +
Preference number: 6 (lower is better)
Translates to: STACVPPLHELA*TSTSEGIKADL
Trigger: TAAGTCTGCTTTAATACCCTCAGAAGTGGAAGTCAAGGCTAGTTCATGTAATGGGGGAACACAGGCAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS CCA 72 bp AAGTTAATGGAAAACAGAGTTTCAGGAGGCTTTGACTaGTGGAAATTTAACAACTGGTCCTGGTTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: KLMENRVSGGFD*WKFNNWSWFSW
Trigger: CCAGGAAAACCAGGACCAGTTGTTAAATTTCCACCAGTCAAAGCCTCCTGAAACTCTGTTTTCCATTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS CCA 72 bp TTAATGGAAAACAGAGTTTCAGGAGGCTTTGACTGGTaGAAATTTAACAACTGGTCCTGGTTTTCCTGGTTA +
Preference number: 6 (lower is better)
Translates to: LMENRVSGGFDW*KFNNWSWFSWL
Trigger: TAACCAGGAAAACCAGGACCAGTTGTTAAATTTCCACCAGTCAAAGCCTCCTGAAACTCTGTTTTCCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6
CDS GCA 72 bp GTTTCACTTTCAGTTGAGGGATTGAATGTTTTTCCTTaGTATCTAGATGCTCATCTCAAGGAAGCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: VSLSVEGLNVFP*YLDAHLKEASL
Trigger: AAGAGAAGCTTCCTTGAGATGAGCATCTAGATAGCAAGGAAAAACATTCAATCCCTCAACTGAAAGTGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487355.5
CDS CCA 72 bp CCACTTCTGAGGGTATTAAAGCAGACTTACACAGCATaGAAAAACCCTACTTTAGTATCACTGTTGATATTT +
Preference number: 6 (lower is better)
Translates to: PLLRVLKQTYTA*KNPTLVSLLIF
Trigger: AAATATCAACAGTGATACTAAAGTAGGGTTTTTCCATGCTGTGTAAGTCTGCTTTAATACCCTCAGAAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361710.6
ENST00000397287.6