RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APOL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100342

Ensembl transcript IDs: ENST00000319136.8, ENST00000397278.8, ENST00000397279.8, ENST00000422706.5, ENST00000426053.5

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACCATGGCCATaGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACC +
Preference number: 1 (lower is better)
Translates to: LGSQGHLLLSWGPWP*PTTCPSVFKQGTCT
Trigger: GGTGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR CCA 90 bp GGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACCATaGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACA +
Preference number: 1 (lower is better)
Translates to: GSLGSQGHLLLSWGP*PWPTTCPSVFKQGT
Trigger: TGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR GCA 90 bp CGACAAGACAGCTCTAGAGATCTGAGCTTCCTCCCAATGCTAAACTaGTTTCATGCTAATTTTCTGACTGTTTACTTACCGGGTAAGAGC +
Preference number: 1 (lower is better)
Translates to: RQDSSRDLSFLPMLN*FHANFLTVYLPGKS
Trigger: GCTCTTACCCGGTAAGTAAACAGTCAGAAAATTAGCATGAAAGCAGTTTAGCATTGGGAGGAAGCTCAGATCTCTAGAGCTGTCTTGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCAGGAAGCCGCTGCCTaGCTGAGATATGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFQEAAA*LRYAPR
Trigger: CCTGGGGGCATATCTCAGTCAGGCAGCGGCTTCCTG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCACGGGAGGCAGAGCTTaGAGTGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFTGGRA*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAAGCTCTGCCTCCCGT...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCTCACCCAGGCTGGAGTaGAGTGGCGATATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFSPRLE*SGDISA
Trigger: AGCCGAGATATCGCCACTGCACTCCAGCCTGGGTGA...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCAGGCTGGAGTGCAGTaGCGATATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFQAGVQ*RYLGSL
Trigger: CAGTGAGCCGAGATATCGCCACTGCACTCCAGCCTG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCAGGCAGAGCTTGCAGTaGGCTGAGATCGCACCATTG +
Preference number: 2 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFRQSLQ*AEIAPL
Trigger: CAATGGTGCGATCTCAGCTCACTGCAAGCTCTGCCT...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCTTTTGTCCTGGCCCCTaGCAGGCATATCTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFFCPGP*QAYLSW
Trigger: CCAGGAGAGATATGCCTGGCAGGGGCCAGGACAAAA...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCTTTGGGAGGCCAAGGTaGGCAGATCAAGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFFGRPR*ADQEVR
Trigger: CCTGACCTCTTGATCTGCCCACCTTGGCCTCCCAAA...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAACGGGAGGCAGAGCTTaGAGTGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: DHGHGPPPALQCSSRGHATGGRA*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAAGCTCTGCCTCCCGT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAAGGCAGAGCTTGCAGTaGGCTGAGATCGCACCATTG +
Preference number: 2 (lower is better)
Translates to: DHGHGPPPALQCSSRGHARQSLQ*AEIAPL
Trigger: CAATGGTGCGATCTCAGCTCACTGCAAGCTCTGCCT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACAGGAAGCCGCTGCCTaGCTGAGATATGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGQEAAA*LRYAPR
Trigger: CCTGGGGGCATATCTCAGTCAGGCAGCGGCTTCCTG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCATTTGGGAGGCCAAGGTaGGCAGATCAAGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAFGRPR*ADQEVR
Trigger: CCTGACCTCTTGATCTGCCCACCTTGGCCTCCCAAA...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCACCTGCTCCTCAGCTaGGGACCATGGCCATGGCCC +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSHLLLS*GPWPWP
Trigger: GGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAAGGCTCCAATGTTCCTaGCTTCTCCTTGCTGCACTG +
Preference number: 2 (lower is better)
Translates to: DHGHGPPPALQCSSRGHARLQCS*LLLAAL
Trigger: CAGTGCAGCAAGGAGAAGGCAGGAACATTGGAGCCT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTGGGGACCATGGCCATaGCCCACCACCTGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSWGPWP*PTTCPS
Trigger: TGAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGATCACCCAGGCTGGAGTaGAGTGGCGATATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGSPRLE*SGDISA
Trigger: AGCCGAGATATCGCCACTGCACTCCAGCCTGGGTGA...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCATTGGGTCAAAAGCGATaGCTCACGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: DHGHGPPPALQCSSRGHALGQKR*LTPVIP
Trigger: TGGGATTACAGGCGTGAGCCATCGCTTTTGACCCAA...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCATGGGGACCATGGCCATaGCCCACCACCTGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSWGPWP*PTTCPS
Trigger: TGAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCA...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCCATGGCCCACCACCTaGCCTTCAGTGTTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSPWPTT*PSVFKQ
Trigger: CTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCAGGCTGGAGTGCAGTaGCGATATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSQAGVQ*RYLGSL
Trigger: CAGTGAGCCGAGATATCGCCACTGCACTCCAGCCTG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCAGGCAGAGCTTGCAGTaGGCTGAGATCGCACCATTG +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSRQSLQ*AEIAPL
Trigger: CAATGGTGCGATCTCAGCTCACTGCAAGCTCTGCCT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAAGGCTCCAATGTTCCTaGCTTCTCCTTGCTGCACTG +
Preference number: 2 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGRLQCS*LLLAAL
Trigger: CAGTGCAGCAAGGAGAAGGCAGGAACATTGGAGCCT...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACCATTTTTCCCTTATTaGAGGCTCCAATGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAPFFPY*RLQCSC
Trigger: GCAGGAACATTGGAGCCTGCAATAAGGGAAAAATGG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCATCACCCAGGCTGGAGTaGAGTGGCGATATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSSPRLE*SGDISA
Trigger: AGCCGAGATATCGCCACTGCACTCCAGCCTGGGTGA...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCATTTTGTCCTGGCCCCTaGCAGGCATATCTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSFCPGP*QAYLSW
Trigger: CCAGGAGAGATATGCCTGGCAGGGGCCAGGACAAAA...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCAGGCTCCAATGTTCCTaGCTTCTCCTTGCTGCACTG +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSRLQCS*LLLAAL
Trigger: CAGTGCAGCAAGGAGAAGGCAGGAACATTGGAGCCT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCTCAGCTGGGGACCATaGCCATGGCCCACCACCTGC +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSLSWGP*PWPTTC
Trigger: GCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCACTCTCTGGGAAGTTTaGGTTCTCAGGGACACCTGC +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSTLWEV*VLRDTC
Trigger: GCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGAAGCCGCTGCCTaGCTGAGATATGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSQEAAA*LRYAPR
Trigger: CCTGGGGGCATATCTCAGTCAGGCAGCGGCTTCCTG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAAGGCTCCAATGTTCCTaGCTTCTCCTTGCTGCACTG +
Preference number: 2 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSRLQCS*LLLAAL
Trigger: CAGTGCAGCAAGGAGAAGGCAGGAACATTGGAGCCT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTTGGGTCAAAAGCGATaGCTCACGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSLGQKR*LTPVIP
Trigger: TGGGATTACAGGCGTGAGCCATCGCTTTTGACCCAA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTTGGGGACCATGGCCATaGCCCACCACCTGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSWGPWP*PTTCPS
Trigger: TGAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCA...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTAAGCCGCTGCCTGACTaGGATATGCCCCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSKPLPD*DMPPGG
Trigger: TCCTCCTGGGGGCATATCTCAGTCAGGCAGCGGCTT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTACGGGAGGCAGAGCTTaGAGTGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSTGGRA*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAAGCTCTGCCTCCCGT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTTCACCCAGGCTGGAGTaGAGTGGCGATATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSSPRLE*SGDISA
Trigger: AGCCGAGATATCGCCACTGCACTCCAGCCTGGGTGA...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGCTGGAGTGCAGTaGCGATATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSQAGVQ*RYLGSL
Trigger: CAGTGAGCCGAGATATCGCCACTGCACTCCAGCCTG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTAGGCAGAGCTTGCAGTaGGCTGAGATCGCACCATTG +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSRQSLQ*AEIAPL
Trigger: CAATGGTGCGATCTCAGCTCACTGCAAGCTCTGCCT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACCATTTTTCCCTTATTaGAGGCTCCAATGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSPFFPY*RLQCSC
Trigger: GCAGGAACATTGGAGCCTGCAATAAGGGAAAAATGG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTTTTGGGAGGCCAAGGTaGGCAGATCAAGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSFGRPR*ADQEVR
Trigger: CCTGACCTCTTGATCTGCCCACCTTGGCCTCCCAAA...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCACTGTTTTCATTGGTTaGTTCTCACATACTCTCTGG +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSTVFIG*FSHTLW
Trigger: CCAGAGAGTATGTGAGAACCAACCAATGAAAACAGT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTGGGACTGTTTTCATTaGTTGGTTCTCACATACTCT +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSWDCFH*LVLTYS
Trigger: AGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR TCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTTCATGCTAATTTTCTaGCTGTTTACTTACCGGGTA +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSFMLIF*LFTYRV
Trigger: TACCCGGTAAGTAAACAGTCAGAAAATTAGCATGAA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCTCCCAATGCTAAACTaGTTTCATGCTAATTTTCTG +
Preference number: 2 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSLPMLN*FHANFL
Trigger: CAGAAAATTAGCATGAAAGCAGTTTAGCATTGGGAG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR GCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCCATTTTTCCCTTATTaGAGGCTCCAATGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSPFFPY*RLQCSC
Trigger: GCAGGAACATTGGAGCCTGCAATAAGGGAAAAATGG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR GCA 72 bp CTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTaGCCTTCAGTGTTCAAGCAGGGGACATGCACCCTT +
Preference number: 3 (lower is better)
Translates to: LLSWGPWPWPTT*PSVFKQGTCTL
Trigger: AAGGGTGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR CCA 72 bp GGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTaGGGACCATGGCCATGGCCCACCACCTGCCCTTCA +
Preference number: 3 (lower is better)
Translates to: GSLGSQGHLLLS*GPWPWPTTCPS
Trigger: TGAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAAGGCAGGAGAATCGCTaGAACACGGGAGGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: DHGHGPPPALQCSSRGHARQENR*NTGGRA
Trigger: AGCTCTGCCTCCCGTGTTCAAGCGATTCTCCTGCCT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCCCATTTTTCCCTTATaGCAGGCTCCAATGTTCCTG +
Preference number: 3 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFPIFPL*QAPMFL
Trigger: CAGGAACATTGGAGCCTGCAATAAGGGAAAAATGGG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR GCA 72 bp CATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTaGTCCTCAGCTGGGGACCATGGCCATGGCCCACCA +
Preference number: 3 (lower is better)
Translates to: HTLWEVWVLRDT*SSAGDHGHGPP
Trigger: TGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCAGGCAGGAGAATCGCTaGAACACGGGAGGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSRQENR*NTGGRA
Trigger: AGCTCTGCCTCCCGTGTTCAAGCGATTCTCCTGCCT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACCCATTTTTCCCTTATaGCAGGCTCCAATGTTCCTG +
Preference number: 3 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAPIFPL*QAPMFL
Trigger: CAGGAACATTGGAGCCTGCAATAAGGGAAAAATGGG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAAGGCAGGAGAATCGCTaGAACACGGGAGGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSRQENR*NTGGRA
Trigger: AGCTCTGCCTCCCGTGTTCAAGCGATTCTCCTGCCT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR CCA 72 bp TTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTaGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: FIGWFSHTLWEV*VLRDTCSSAGD
Trigger: GTCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCCCATTTTTCCCTTATaGCAGGCTCCAATGTTCCTG +
Preference number: 3 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSPIFPL*QAPMFL
Trigger: CAGGAACATTGGAGCCTGCAATAAGGGAAAAATGGG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTAGGCAGGAGAATCGCTaGAACACGGGAGGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSRQENR*NTGGRA
Trigger: AGCTCTGCCTCCCGTGTTCAAGCGATTCTCCTGCCT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCGACTGTTTTCATTGGTaGGTTCTCACATACTCTCTG +
Preference number: 3 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSDCFHW*VLTYSL
Trigger: CAGAGAGTATGTGAGAACCAACCAATGAAAACAGTC...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCATGGGACTGTTTTCATaGGTTGGTTCTCACATACTC +
Preference number: 3 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSMGLFS*VGSHIL
Trigger: GAGTATGTGAGAACCAACCAATGAAAACAGTCCCAT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCATAAAATGTTTGCATTaGGGTCAAAAGCGATGGCTC +
Preference number: 3 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSIKCLH*GQKRWL
Trigger: GAGCCATCGCTTTTGACCCAAATGCAAACATTTTAT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR CCA 72 bp TTACCGGGTAAGAGCGATGGGACTGTTTTCATTGGTTaGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTC +
Preference number: 3 (lower is better)
Translates to: LPGKSDGTVFIG*FSHTLWEVWVL
Trigger: GAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCATCGCTCTTACCCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCCCATTTTTCCCTTATaGCAGGCTCCAATGTTCCTG +
Preference number: 3 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSPIFPL*QAPMFL
Trigger: CAGGAACATTGGAGCCTGCAATAAGGGAAAAATGGG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR GCA 72 bp AGCTCTAGAGATCTGAGCTTCCTCCCAATGCTAAACTaGTTTCATGCTAATTTTCTGACTGTTTACTTACCG +
Preference number: 3 (lower is better)
Translates to: SSRDLSFLPMLN*FHANFLTVYLP
Trigger: CGGTAAGTAAACAGTCAGAAAATTAGCATGAAAGCAGTTTAGCATTGGGAGGAAGCTCAGATCTCTAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCTGAGATTGGCTCAGTaGCCCGGGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFLRLAQ*PGGVRL
Trigger: CAGCCTCACGCCCCCGGGTCACTGAGCCAATCTCAG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCTCAGCTGGGGACCATaGCCATGGCCCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFLSWGP*PWPTTC
Trigger: GCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCGGCTGCCCTGCCCTGTaGTCACAGTTCTTGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFGCPAL*SQFLVR
Trigger: GCGGACCAAGAACTGTGACCACAGGGCAGGGCAGCC...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCGCATATCTCTCCTGGTaGCTGCCCTGCCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFAYLSW*LPCPVV
Trigger: GACCACAGGGCAGGGCAGCCACCAGGAGAGATATGC...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCGGTCAAAGCGGCTGTaGTTCCCAACTCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFRSKRL*FPTPSQ
Trigger: CTGGGATGGAGTTGGGAATCACAGCCGCTTTGACCG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCACCAGGTCGTGGGCTTaGGCTTGTGTCCACCACTTC +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFTRSWA*ACVHHF
Trigger: GAAGTGGTGGACACAAGCCCAAGCCCACGACCTGGT...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCGCATGCGGTACTGACTaGAGATTGGCTCTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFACGTD*RLALAR
Trigger: ACGAGCCAGAGCCAATCTTCAGTCAGTACCGCATGC...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCTTCTGAACCCCATCTaGAAGGGCACGGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFLLNPI*KGTEPS
Trigger: AGAAGGCTCCGTGCCCTTGCAGATGGGGTTCAGAAG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCTTGATGACCAGGTCGTaGGCTTGGGCTTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFLMTRS*AWACVH
Trigger: GTGGACACAAGCCCAAGCCCACGACCTGGTCATCAA...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACAGGAAGCCGCTGCCTaGCTGAGATATGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAQEAAA*LRYAPR
Trigger: CCTGGGGGCATATCTCAGTCAGGCAGCGGCTTCCTG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCAGGCTCCAATGTTCCTaGCTTCTCCTTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFRLQCS*LLLAAL
Trigger: CAGTGCAGCAAGGAGAAGGCAGGAACATTGGAGCCT...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCTCCCAATGCCTCGTGTaGGTTGGTAAGTATTGCCAG +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFSQCLV*VGKYCQ
Trigger: CTGGCAATACTTACCAACTCACACGAGGCATTGGGA...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCATTGGCGATGGTGGTaGCTTTGTGGACCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFHWRWW*LCGPSE
Trigger: TTCAGAAGGTCCACAAAGGCACCACCATCGCCAATG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAGCATATCTCTCCTGGTaGCTGCCCTGCCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAAYLSW*LPCPVV
Trigger: GACCACAGGGCAGGGCAGCCACCAGGAGAGATATGC...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCTTGGGTCAAAAGCGATaGCTCACGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFLGQKR*LTPVIP
Trigger: TGGGATTACAGGCGTGAGCCATCGCTTTTGACCCAA...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACGGTCAAAGCGGCTGTaGTTCCCAACTCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHARSKRL*FPTPSQ
Trigger: CTGGGATGGAGTTGGGAATCACAGCCGCTTTGACCG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACTGAGATTGGCTCAGTaGCCCGGGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGLRLAQ*PGGVRL
Trigger: CAGCCTCACGCCCCCGGGTCACTGAGCCAATCTCAG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACAGGCTGGAGTGCAGTaGCGATATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAQAGVQ*RYLGSL
Trigger: CAGTGAGCCGAGATATCGCCACTGCACTCCAGCCTG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAGCATGCGGTACTGACTaGAGATTGGCTCTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAACGTD*RLALAR
Trigger: ACGAGCCAGAGCCAATCTTCAGTCAGTACCGCATGC...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCTGAGATTGGCTCAGTaGCCCGGGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSLRLAQ*PGGVRL
Trigger: CAGCCTCACGCCCCCGGGTCACTGAGCCAATCTCAG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCAGTATCTGTCCCACTTaGAACGTTTTGTTGCACCCT +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFSICPT*NVLLHP
Trigger: AGGGTGCAACAAAACGTTCCAAGTGGGACAGATACT...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR CCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCATTGATGACCAGGTCGTaGGCTTGGGCTTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHALMTRS*AWACVH
Trigger: GTGGACACAAGCCCAAGCCCACGACCTGGTCATCAA...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGATGGGGACCATGGCCATaGCCCACCACCTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGWGPWP*PTTCPS
Trigger: TGAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCA...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCTCAGCTGGGGACCATaGCCATGGCCCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSLSWGP*PWPTTC
Trigger: GCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACCGAGGGGCTTACTTTaGGGATCTCCAGTATCTGTC +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAPRGLL*GSPVSV
Trigger: GACAGATACTGGAGATCCTCAAAGTAAGCCCCTCGG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAAAGCCGCTGCCTGACTaGGATATGCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGKPLPD*DMPPGG
Trigger: TCCTCCTGGGGGCATATCTCAGTCAGGCAGCGGCTT...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCAGGAAGCCGCTGCCTaGCTGAGATATGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSQEAAA*LRYAPR
Trigger: CCTGGGGGCATATCTCAGTCAGGCAGCGGCTTCCTG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAATCTCTCCTGGTGGCTaGCCTGCCCTGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGISPGG*PALWSQ
Trigger: CTGTGACCACAGGGCAGGGCAGCCACCAGGAGAGAT...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCGGCTGCCCTGCCCTGTaGTCACAGTTCTTGGTCCGC +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSGCPAL*SQFLVR
Trigger: GCGGACCAAGAACTGTGACCACAGGGCAGGGCAGCC...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACTCAGCTGGGGACCATaGCCATGGCCCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSLSWGP*PWPTTC
Trigger: GCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACACCTGCTCCTCAGCTaGGGACCATGGCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSHLLLS*GPWPWP
Trigger: GGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCATCCCAATGCCTCGTGTaGGTTGGTAAGTATTGCCAG +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHASQCLV*VGKYCQ
Trigger: CTGGCAATACTTACCAACTCACACGAGGCATTGGGA...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCAAGCCGCTGCCTGACTaGGATATGCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSKPLPD*DMPPGG
Trigger: TCCTCCTGGGGGCATATCTCAGTCAGGCAGCGGCTT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCATCTCTCCTGGTGGCTaGCCTGCCCTGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSISPGG*PALWSQ
Trigger: CTGTGACCACAGGGCAGGGCAGCCACCAGGAGAGAT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACCATGGCCCACCACCTaGCCTTCAGTGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGPWPTT*PSVFKQ
Trigger: CTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAACCAGGTCGTGGGCTTaGGCTTGTGTCCACCACTTC +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGTRSWA*ACVHHF
Trigger: GAAGTGGTGGACACAAGCCCAAGCCCACGACCTGGT...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCGCATATCTCTCCTGGTaGCTGCCCTGCCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSAYLSW*LPCPVV
Trigger: GACCACAGGGCAGGGCAGCCACCAGGAGAGATATGC...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACAGGCTGGAGTGCAGTaGCGATATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGQAGVQ*RYLGSL
Trigger: CAGTGAGCCGAGATATCGCCACTGCACTCCAGCCTG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCACTGTTTTCATTGGTTaGTTCTCACATACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFTVFIG*FSHTLW
Trigger: CCAGAGAGTATGTGAGAACCAACCAATGAAAACAGT...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCTGGGACTGTTTTCATTaGTTGGTTCTCACATACTCT +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFWDCFH*LVLTYS
Trigger: AGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAAGGCAGAGCTTGCAGTaGGCTGAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGRQSLQ*AEIAPL
Trigger: CAATGGTGCGATCTCAGCTCACTGCAAGCTCTGCCT...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAAAGCCGCTGCCTGACTaGGATATGCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSKPLPD*DMPPGG
Trigger: TCCTCCTGGGGGCATATCTCAGTCAGGCAGCGGCTT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACACACCAAGGAAAAGTaGACTCATCCAGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAHTKEK*THPDAE
Trigger: CTCTGCATCTGGATGAGTGCACTTTTCCTTGGTGTG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR GCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAAACCAGTTTCTGTACTaGTGGCCTTTATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHANQFLY*WPLSCQ
Trigger: CTGGCACGATAAAGGCCAGCAGTACAGAAACTGGTT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACTTCTGAACCCCATCTaGAAGGGCACGGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGLLNPI*KGTEPS
Trigger: AGAAGGCTCCGTGCCCTTGCAGATGGGGTTCAGAAG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGATTTTGTCCTGGCCCCTaGCAGGCATATCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGFCPGP*QAYLSW
Trigger: CCAGGAGAGATATGCCTGGCAGGGGCCAGGACAAAA...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCTCCCAATGCTAAACTaGTTTCATGCTAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFLPMLN*FHANFL
Trigger: CAGAAAATTAGCATGAAAGCAGTTTAGCATTGGGAG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCACCAGGTCGTGGGCTTaGGCTTGTGTCCACCACTTC +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSTRSWA*ACVHHF
Trigger: GAAGTGGTGGACACAAGCCCAAGCCCACGACCTGGT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCATGTGGTCACAGTTCTTaGTCCGCCTGCAGAATCTTA +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHACGHSS*SACRIL
Trigger: TAAGATTCTGCAGGCGGACCAAGAACTGTGACCACA...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACGGTCAAAGCGGCTGTaGTTCCCAACTCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSRSKRL*FPTPSQ
Trigger: CTGGGATGGAGTTGGGAATCACAGCCGCTTTGACCG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCGCATGCGGTACTGACTaGAGATTGGCTCTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSACGTD*RLALAR
Trigger: ACGAGCCAGAGCCAATCTTCAGTCAGTACCGCATGC...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAACGGGAGGCAGAGCTTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSTGGRA*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAAGCTCTGCCTCCCGT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACCATGGCCCACCACCTaGCCTTCAGTGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSPWPTT*PSVFKQ
Trigger: CTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAGGGGTTGAGACAGTGTaGTCCTCCAAGGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGGVETV*SSKESS
Trigger: GGAAGATTCCTTGGAGGAGCACACTGTCTCAACCCC...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422706.5
CDS-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCATCTGCCTCATTCCTaGGCAGTTCAGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSHLPHS*AVQQQP
Trigger: TGGCTGCTGCTGAACTGCCCAGGAATGAGGCAGATG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACAGTTTCTGTACTGCTaGCCTTTATCGTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAQFLYC*PLSCQF
Trigger: AAACTGGCACGATAAAGGCCAGCAGTACAGAAACTG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAACCAGGTCGTGGGCTTaGGCTTGTGTCCACCACTTC +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSTRSWA*ACVHHF
Trigger: GAAGTGGTGGACACAAGCCCAAGCCCACGACCTGGT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTTTGGGAGGCCAAGGTaGGCAGATCAAGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSFGRPR*ADQEVR
Trigger: CCTGACCTCTTGATCTGCCCACCTTGGCCTCCCAAA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGATCCCAATGCCTCGTGTaGGTTGGTAAGTATTGCCAG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGSQCLV*VGKYCQ
Trigger: CTGGCAATACTTACCAACTCACACGAGGCATTGGGA...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCATCCCACCTCCAGTTATaGGTCTGTATAATAACCAGA +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHASHLQL*VCIITR
Trigger: TCTGGTTATTATACAGACGCATAACTGGAGGTGGGA...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCATGCTGGCCTTTATCGTaGCAGTTTTTGTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHACWPLS*QFLSFM
Trigger: CATGAAAGACAAAAACTGGCACGATAAAGGCCAGCA...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACTTCTGAACCCCATCTaGAAGGGCACGGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSLLNPI*KGTEPS
Trigger: AGAAGGCTCCGTGCCCTTGCAGATGGGGTTCAGAAG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACATTGGCGATGGTGGTaGCTTTGTGGACCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGHWRWW*LCGPSE
Trigger: TTCAGAAGGTCCACAAAGGCACCACCATCGCCAATG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACATCTGCCTCATTCCTaGGCAGTTCAGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSHLPHS*AVQQQP
Trigger: TGGCTGCTGCTGAACTGCCCAGGAATGAGGCAGATG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGATTGGGTCAAAAGCGATaGCTCACGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGLGQKR*LTPVIP
Trigger: TGGGATTACAGGCGTGAGCCATCGCTTTTGACCCAA...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCACCTGCTCCTCAGCTaGGGACCATGGCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSHLLLS*GPWPWP
Trigger: GGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTCCCAATGCCTCGTGTaGGTTGGTAAGTATTGCCAG +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSSQCLV*VGKYCQ
Trigger: CTGGCAATACTTACCAACTCACACGAGGCATTGGGA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACACACCAAGGAAAAGTaGACTCATCCAGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGHTKEK*THPDAE
Trigger: CTCTGCATCTGGATGAGTGCACTTTTCCTTGGTGTG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCATTGGCGATGGTGGTaGCTTTGTGGACCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSHWRWW*LCGPSE
Trigger: TTCAGAAGGTCCACAAAGGCACCACCATCGCCAATG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGATGTGGTCACAGTTCTTaGTCCGCCTGCAGAATCTTA +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGCGHSS*SACRIL
Trigger: TAAGATTCTGCAGGCGGACCAAGAACTGTGACCACA...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTGGCTGCCCTGCCCTGTaGTCACAGTTCTTGGTCCGC +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSGCPAL*SQFLVR
Trigger: GCGGACCAAGAACTGTGACCACAGGGCAGGGCAGCC...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAACTGTTTTCATTGGTTaGTTCTCACATACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: DHGHGPPPALQCSSRGHATVFIG*FSHTLW
Trigger: CCAGAGAGTATGTGAGAACCAACCAATGAAAACAGT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTATCTCTCCTGGTGGCTaGCCTGCCCTGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSISPGG*PALWSQ
Trigger: CTGTGACCACAGGGCAGGGCAGCCACCAGGAGAGAT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTTTGTTGCACCCAGATaGAGAGGACAGAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSFVAPR*RGQRLS
Trigger: TGAGAGTCTCTGTCCTCTGCATCTGGGTGCAACAAA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCATTGGGTCAAAAGCGATaGCTCACGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSLGQKR*LTPVIP
Trigger: TGGGATTACAGGCGTGAGCCATCGCTTTTGACCCAA...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
3UTR CAA 72 bp TTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTaGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FHWLVLTYSLGS*GSQGHLLLSWG
Trigger: TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACACACCAAGGAAAAGTaGACTCATCCAGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSHTKEK*THPDAE
Trigger: CTCTGCATCTGGATGAGTGCACTTTTCCTTGGTGTG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGATGCTGGCCTTTATCGTaGCAGTTTTTGTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGCWPLS*QFLSFM
Trigger: CATGAAAGACAAAAACTGGCACGATAAAGGCCAGCA...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAAACCAGTTTCTGTACTaGTGGCCTTTATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSNQFLY*WPLSCQ
Trigger: CTGGCACGATAAAGGCCAGCAGTACAGAAACTGGTT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCCATTTTTCCCTTATTaGAGGCTCCAATGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSPFFPY*RLQCSC
Trigger: GCAGGAACATTGGAGCCTGCAATAAGGGAAAAATGG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCCATGGCCCACCACCTaGCCTTCAGTGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSPWPTT*PSVFKQ
Trigger: CTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCAGTTTCTGTACTGCTaGCCTTTATCGTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSQFLYC*PLSCQF
Trigger: AAACTGGCACGATAAAGGCCAGCAGTACAGAAACTG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCATGTGGTCACAGTTCTTaGTCCGCCTGCAGAATCTTA +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSCGHSS*SACRIL
Trigger: TAAGATTCTGCAGGCGGACCAAGAACTGTGACCACA...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCAGTATCTGTCCCACTTaGAACGTTTTGTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSSICPT*NVLLHP
Trigger: TGGGTGCAACAAAACGTTCCAAGTGGGACAGATACT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426053.5
CDS-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTCCCACCTCCAGTTATaGGTCTGTATAATAACCAGA +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSSHLQL*VCIITR
Trigger: TCTGGTTATTATACAGACGCATAACTGGAGGTGGGA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCTGCTGGCCTTTATCGTaGCAGTTTTTGTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSCWPLS*QFLSFM
Trigger: CATGAAAGACAAAAACTGGCACGATAAAGGCCAGCA...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTTTTTGTCCTGGCCCCTaGCAGGCATATCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSFCPGP*QAYLSW
Trigger: CCAGGAGAGATATGCCTGGCAGGGGCCAGGACAAAA...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAAGTATCTGTCCCACTTaGAACGTTTTGTTGCACCCT +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSSICPT*NVLLHP
Trigger: AGGGTGCAACAAAACGTTCCAAGTGGGACAGATACT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCATCTGCCTCATTCCTaGGCAGTTCAGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSHLPHS*AVQQQP
Trigger: TGGCTGCTGCTGAACTGCCCAGGAATGAGGCAGATG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACAGTTTCTGTACTGCTaGCCTTTATCGTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSQFLYC*PLSCQF
Trigger: AAACTGGCACGATAAAGGCCAGCAGTACAGAAACTG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTTTGATGACCAGGTCGTaGGCTTGGGCTTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSLMTRS*AWACVH
Trigger: GTGGACACAAGCCCAAGCCCACGACCTGGTCATCAA...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGATGGGACTGTTTTCATTaGTTGGTTCTCACATACTCT +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGWDCFH*LVLTYS
Trigger: AGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCCGAGGGGCTTACTTTaGGGATCTCCAGTATCTGTC +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSPRGLL*GSPVSV
Trigger: GACAGATACTGGAGATCCTCAAAGTAAGCCCCTCGG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTAGGCTCCAATGTTCCTaGCTTCTCCTTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSRLQCS*LLLAAL
Trigger: CAGTGCAGCAAGGAGAAGGCAGGAACATTGGAGCCT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACTCCCAATGCTAAACTaGTTTCATGCTAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGLPMLN*FHANFL
Trigger: CAGAAAATTAGCATGAAAGCAGTTTAGCATTGGGAG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAACTGTTTTCATTGGTTaGTTCTCACATACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSTVFIG*FSHTLW
Trigger: CCAGAGAGTATGTGAGAACCAACCAATGAAAACAGT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCATTCATGCTAATTTTCTaGCTGTTTACTTACCGGGTA +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSFMLIF*LFTYRV
Trigger: TACCCGGTAAGTAAACAGTCAGAAAATTAGCATGAA...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTAACCAGTTTCTGTACTaGTGGCCTTTATCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSNQFLY*WPLSCQ
Trigger: CTGGCACGATAAAGGCCAGCAGTACAGAAACTGGTT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR GCA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACTCCCAATGCTAAACTaGTTTCATGCTAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSLPMLN*FHANFL
Trigger: CAGAAAATTAGCATGAAAGCAGTTTAGCATTGGGAG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTTGTGGTCACAGTTCTTaGTCCGCCTGCAGAATCTTA +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSCGHSS*SACRIL
Trigger: TAAGATTCTGCAGGCGGACCAAGAACTGTGACCACA...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGTTTCTGTACTGCTaGCCTTTATCGTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSQFLYC*PLSCQF
Trigger: AAACTGGCACGATAAAGGCCAGCAGTACAGAAACTG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTTGGGACTGTTTTCATTaGTTGGTTCTCACATACTCT +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSWDCFH*LVLTYS
Trigger: AGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR TCA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTTTCATGCTAATTTTCTaGCTGTTTACTTACCGGGTA +
Preference number: 4 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSFMLIF*LFTYRV
Trigger: TACCCGGTAAGTAAACAGTCAGAAAATTAGCATGAA...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCCCACTTGGAACGTTTaGTTGCACCCTCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFPTWNV*LHPRSS
Trigger: GCTGGAGCGAGGGTGCAACAAAACGTTCCAAGTGGG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR CAA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCGCCACATCCGTGAGCTaGACTCCTCTGCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFATSVS*TPLLIS
Trigger: GGAAATGAGCAGAGGAGTCAAGCTCACGGATGTGGC...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCCCACTTGGAACGTTTaGTTGCACCCAGATGCAGAG +
Preference number: 5 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFPTWNV*LHPDAE
Trigger: CTCTGCATCTGGGTGCAACAAAACGTTCCAAGTGGG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426053.5
CDS-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACCCACTTGGAACGTTTaGTTGCACCCTCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAPTWNV*LHPRSS
Trigger: GCTGGAGCGAGGGTGCAACAAAACGTTCCAAGTGGG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAGTCGTGGGCTTGGGCTaGTGTCCACCACTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAVVGLG*CPPLLS
Trigger: GGAAAGAAGTGGTGGACACAAGCCCAAGCCCACGAC...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCAATTTGTCAAGGCTTTaGATGACCAGGTCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFNLSRL*MTRSWA
Trigger: AGCCCACGACCTGGTCATCAAAAGCCTTGACAAATT...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GGGACACCTGCTCCTCAGCTGGGGACCATGGCCATGGCCCACCACCTGCCCTTCCTCACCTCCTTCAATTaGTCAAGGCTTTTGATGACC +
Preference number: 5 (lower is better)
Translates to: GTPAPQLGTMAMAHHLPFLTSFN*SRLLMT
Trigger: GGTCATCAAAAGCCTTGACAAATTGAAGGAGGTGAG...GAAGGGCAGGTGGTGGGCCATGGCCATGGTCCCCAGCTGAGGAGCAGGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAACTTGGAACGTTTTGTaGCACCCTCGCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DHGHGPPPALQCSSRGHATWNVL*HPRSSF
Trigger: GAAGCTGGAGCGAGGGTGCAACAAAACGTTCCAAGT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAGACCAGGTCGTGGGCTaGGGCTTGTGTCCACCACTT +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGDQVVG*GLCPPL
Trigger: AAGTGGTGGACACAAGCCCAAGCCCACGACCTGGTC...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACAGTATCTGTCCCACTaGGAACGTTTTGTTGCACCC +
Preference number: 5 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAQYLSH*ERFVAP
Trigger: GGGTGCAACAAAACGTTCCAAGTGGGACAGATACTG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAACCGAGGGGCTTACTTaGAGGATCTCCAGTATCTGT +
Preference number: 5 (lower is better)
Translates to: DHGHGPPPALQCSSRGHATEGLT*RISSIC
Trigger: ACAGATACTGGAGATCCTCAAAGTAAGCCCCTCGGT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCGACCAGGTCGTGGGCTaGGGCTTGTGTCCACCACTT +
Preference number: 5 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSDQVVG*GLCPPL
Trigger: AAGTGGTGGACACAAGCCCAAGCCCACGACCTGGTC...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAAGGCAGGAGAATCGCTaGAACACGGGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGRQENR*NTGGRA
Trigger: AGCTCTGCCTCCCGTGTTCAAGCGATTCTCCTGCCT...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCGTCGTGGGCTTGGGCTaGTGTCCACCACTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSVVGLG*CPPLLS
Trigger: GGAAAGAAGTGGTGGACACAAGCCCAAGCCCACGAC...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGACCAGGTCGTGGGCTaGGGCTTGTGTCCACCACTT +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSDQVVG*GLCPPL
Trigger: AAGTGGTGGACACAAGCCCAAGCCCACGACCTGGTC...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCAAATTTGTCAAGGCTTTaGATGACCAGGTCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: DHGHGPPPALQCSSRGHANLSRL*MTRSWA
Trigger: AGCCCACGACCTGGTCATCAAAAGCCTTGACAAATT...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAGCCACATCCGTGAGCTaGACTCCTCTGCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGATSVS*TPLLIS
Trigger: GGAAATGAGCAGAGGAGTCAAGCTCACGGATGTGGC...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGTCGTGGGCTTGGGCTaGTGTCCACCACTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSVVGLG*CPPLLS
Trigger: GGAAAGAAGTGGTGGACACAAGCCCAAGCCCACGAC...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACTCACCTCCTTCAATTaGTCAAGGCTTTTGATGACC +
Preference number: 5 (lower is better)
Translates to: DHGHGPPPALQCSSRGHALTSFN*SRLLMT
Trigger: GGTCATCAAAAGCCTTGACAAATTGAAGGAGGTGAG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCGCCACATCCGTGAGCTaGACTCCTCTGCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSATSVS*TPLLIS
Trigger: GGAAATGAGCAGAGGAGTCAAGCTCACGGATGTGGC...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp GACCATGGCCATGGCCCACCACCTGCCCTTCAGTGTTCAAGCAGGGGACATGCACCTCATGTAAGTGCTTaGATTCGTACACGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: DHGHGPPPALQCSSRGHAPHVSA*IRTRGR
Trigger: TCTACCTCGTGTACGAATCAAAGCACTTACATGAGG...TGCATGTCCCCTGCTTGAACACTGAAGGGCAGGTGGTGGGCCATGGCCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACAGCTGTCTCTGACTTaGCCCCCTCATGTAAGTGCT +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGQLSLT*PPHVSA
Trigger: AGCACTTACATGAGGGGGCAAAGTCAGAGACAGCTG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCACTTGGAACGTTTTGTaGCACCCTCGCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSTWNVL*HPRSSF
Trigger: GAAGCTGGAGCGAGGGTGCAACAAAACGTTCCAAGT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACAGTATCTGTCCCACTaGGAACGTTTTGTTGCACCC +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGQYLSH*ERFVAP
Trigger: GGGTGCAACAAAACGTTCCAAGTGGGACAGATACTG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCCAGCTGTCTCTGACTTaGCCCCCTCATGTAAGTGCT +
Preference number: 5 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSQLSLT*PPHVSA
Trigger: AGCACTTACATGAGGGGGCAAAGTCAGAGACAGCTG...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAACTTGGAACGTTTTGTaGCACCCTCGCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSTWNVL*HPRSSF
Trigger: GAAGCTGGAGCGAGGGTGCAACAAAACGTTCCAAGT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
CDS-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCACCGAGGGGCTTACTTaGAGGATCTCCAGTATCTGT +
Preference number: 5 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSTEGLT*RISSIC
Trigger: ACAGATACTGGAGATCCTCAAAGTAAGCCCCTCGGT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCACTTGGAACGTTTTGTaGCACCCAGATGCAGAGGAC +
Preference number: 5 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSTWNVL*HPDAED
Trigger: GTCCTCTGCATCTGGGTGCAACAAAACGTTCCAAGT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACAGTATCTGTCCCACTaGGAACGTTTTGTTGCACCC +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSQYLSH*ERFVAP
Trigger: GGGTGCAACAAAACGTTCCAAGTGGGACAGATACTG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAACCGAGGGGCTTACTTaGAGGATCTCCAGTATCTGT +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSTEGLT*RISSIC
Trigger: ACAGATACTGGAGATCCTCAAAGTAAGCCCCTCGGT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACTTACACACAGGTCAATCCTGGGCGGCGACAAGACAGCTCTAGAGATCTGAGCAATTTGTCAAGGCTTTaGATGACCAGGTCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: TYTQVNPGRRQDSSRDLSNLSRL*MTRSWA
Trigger: AGCCCACGACCTGGTCATCAAAAGCCTTGACAAATT...GCTCAGATCTCTAGAGCTGTCTTGTCGCCGCCCAGGATTGACCTGTGTGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGACCTCATGTAAGTGCTTaGATTCGTACACGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGPHVSA*IRTRGR
Trigger: TCTACCTCGTGTACGAATCAAAGCACTTACATGAGG...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAGACTGTTTTCATTGGTaGGTTCTCACATACTCTCTG +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGDCFHW*VLTYSL
Trigger: CAGAGAGTATGTGAGAACCAACCAATGAAAACAGTC...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAATGGGACTGTTTTCATaGGTTGGTTCTCACATACTC +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGMGLFS*VGSHIL
Trigger: GAGTATGTGAGAACCAACCAATGAAAACAGTCCCAT...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTGCCACATCCGTGAGCTaGACTCCTCTGCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSATSVS*TPLLIS
Trigger: GGAAATGAGCAGAGGAGTCAAGCTCACGGATGTGGC...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCACCTCATGTAAGTGCTTaGATTCGTACACGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSPHVSA*IRTRGR
Trigger: TCTACCTCGTGTACGAATCAAAGCACTTACATGAGG...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp ACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGCTGGGGAATAAAATGTTTGCATTaGGGTCAAAAGCGATGGCTC +
Preference number: 5 (lower is better)
Translates to: TYSLGSLGSQGHLLLSWGIKCLH*GQKRWL
Trigger: GAGCCATCGCTTTTGACCCAAATGCAAACATTTTAT...TCCCCAGCTGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAGTCTTTCATGATCATTaGTCTTGCAAGGTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSVFHDH*SCKVVQ
Trigger: CTGGACAACCTTGCAAGACAAATGATCATGAAAGAC...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGCTGTCTCTGACTTaGCCCCCTCATGTAAGTGCT +
Preference number: 5 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSQLSLT*PPHVSA
Trigger: AGCACTTACATGAGGGGGCAAAGTCAGAGACAGCTG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAATGGGACTGTTTTCATaGGTTGGTTCTCACATACTC +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSMGLFS*VGSHIL
Trigger: GAGTATGTGAGAACCAACCAATGAAAACAGTCCCAT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGTATCTGTCCCACTaGGAACGTTTTGTTGCACCC +
Preference number: 5 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSQYLSH*ERFVAP
Trigger: GGGTGCAACAAAACGTTCCAAGTGGGACAGATACTG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCAGGGACACCTGCTCCTCAATAAAATGTTTGCATTaGGGTCAAAAGCGATGGCTC +
Preference number: 5 (lower is better)
Translates to: WFSHTLWEVWVLRDTCSSIKCLH*GQKRWL
Trigger: GAGCCATCGCTTTTGACCCAAATGCAAACATTTTAT...TGAGGAGCAGGTGTCCCTGAGAACCCAAACTTCCCAGAGAGTATGTGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTCTCACCTCCTTCAATTaGTCAAGGCTTTTGATGACC +
Preference number: 5 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSLTSFN*SRLLMT
Trigger: GGTCATCAAAAGCCTTGACAAATTGAAGGAGGTGAG...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTGACTGTTTTCATTGGTaGGTTCTCACATACTCTCTG +
Preference number: 5 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSDCFHW*VLTYSL
Trigger: CAGAGAGTATGTGAGAACCAACCAATGAAAACAGTC...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTATGGGACTGTTTTCATaGGTTGGTTCTCACATACTC +
Preference number: 5 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSMGLFS*VGSHIL
Trigger: GAGTATGTGAGAACCAACCAATGAAAACAGTCCCAT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS-3UTR CAA 90 bp TGGGACTGTTTTCATTGGTTGGTTCTCACATACTCTCTGGGAAGTTTGGGTTCTATAAAATGTTTGCATTaGGGTCAAAAGCGATGGCTC +
Preference number: 5 (lower is better)
Translates to: WDCFHWLVLTYSLGSLGSIKCLH*GQKRWL
Trigger: GAGCCATCGCTTTTGACCCAAATGCAAACATTTTAT...AGAACCCAAACTTCCCAGAGAGTATGTGAGAACCAACCAATGAAAACAGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000422706.5
ENST00000426053.5
CDS CAA 90 bp CACCTCCTTCAATTTGTCAAGGCTTTTGATGACCAGGTCGTGGGCTaGGGCTTGTGTCCACCACTTCTTTCCGTAGTCCATGGTACTGCT +
Preference number: 6 (lower is better)
Translates to: HLLQFVKAFDDQVVG*GLCPPLLSVVHGTA
Trigger: AGCAGTACCATGGACTACGGAAAGAAGTGGTGGACACAAGCCCAAGCCCACGACCTGGTCATCAAAAGCCTTGACAAATTGAAGGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000397279.8
ENST00000422706.5
ENST00000426053.5
CDS CAA 72 bp ACAAGAAAGAAGCTTACAGGGGCCACATCCGTGAGCTaGACTCCTCTGCTCATTTCCAGGATGCTGGGTTCA +
Preference number: 6 (lower is better)
Translates to: TRKKLTGATSVS*TPLLISRMLGS
Trigger: TGAACCCAGCATCCTGGAAATGAGCAGAGGAGTCAAGCTCACGGATGTGGCCCCTGTAAGCTTCTTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000397279.8
ENST00000422706.5
ENST00000426053.5
CDS CAA 72 bp AAAAACTCCCTCACCTCCTTCAATTTGTCAAGGCTTTaGATGACCAGGTCGTGGGCTTGGGCTTGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: KNSLTSFNLSRL*MTRSWAWACVH
Trigger: GTGGACACAAGCCCAAGCCCACGACCTGGTCATCAAAAGCCTTGACAAATTGAAGGAGGTGAGGGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000397279.8
ENST00000422706.5
ENST00000426053.5
CDS CAA 90 bp TTCTCACCCAAAAACTCCCTCACCTCCTTCAATTTGTCAAGGCTTTaGATGACCAGGTCGTGGGCTTGGGCTTGTGTCCACCACTTCTTT +
Preference number: 6 (lower is better)
Translates to: FSPKNSLTSFNLSRL*MTRSWAWACVHHFF
Trigger: AAAGAAGTGGTGGACACAAGCCCAAGCCCACGACCTGGTCATCAAAAGCCTTGACAAATTGAAGGAGGTGAGGGAGTTTTTGGGTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319136.8
ENST00000397278.8
ENST00000397279.8
ENST00000422706.5
ENST00000426053.5