Pregenerated sensors for APOH (Homo sapiens)
Ensembl gene IDs: ENSG00000091583Ensembl transcript IDs: ENST00000205948.11, ENST00000577982.1, ENST00000581797.5, ENST00000585162.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACGGGACAGGTCCGTCCTaGAATAGCAACATGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHGTGPS*NSNMAE Trigger: CTCTGCCATGTTGCTATTGCAGGACGGACCTGTCCC...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCGTAGGTATGGATGGTaGAGGGCAGATGATGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GSLDEQETSVTFCVESENRRYGW*RADDGS Trigger: GCTCCCATCATCTGCCCTCCACCATCCATACCTACG...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACGTAAATCATCTGGCTTaGGACAGGTCCGTCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHVNHLA*DRSVLQ Trigger: TTGCAGGACGGACCTGTCCCAAGCCAGATGATTTAC...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACCTTCCTCAGTGCACTTaGCAGAATCAGCGCCATTCA | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHLPQCT*QNQRHS Trigger: TGAATGGCGCTGATTCTGCCAAGTGCACTGAGGAAG...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACAAACGTAGGTATGGATaGTGGAGGGCAGATGATGGG | + |
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Preference number: 4 (lower is better) Translates to: GSLDEQETSVTFCVESENKRRYG*WRADDG Trigger: CCCATCATCTGCCCTCCACCATCCATACCTACGTTT...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR TCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACGAGAACTGTGTTCCTTaGAGCATTTGGGGACTTCGA | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHENCVP*SIWGLR Trigger: TCGAAGTCCCCAAATGCTTCAAGGAACACAGTTCTC...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR GCA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACATTTTCCTTCCTCAGTaGACTTGGCAGAATCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: GSLDEQETSVTFCVESENIFLPQ*TWQNQR Trigger: GCGCTGATTCTGCCAAGTGCACTGAGGAAGGAAAAT...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR TCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACAGAAATCATTGTGGATaGGTCACACTGGCACTACCA | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHRNHCG*VTLALP Trigger: TGGTAGTGCCAGTGTGACTCATCCACAATGATTTCT...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACCCTGCAATAGCAACATaGCAGAGAAAACTCGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHPAIAT*QRKLEN Trigger: GTTCTCGAGTTTTCTCTGCCATGTTGCTATTGCAGG...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACAGATGCTTTACAACTTaGCATGGCAGACCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHRCFTT*HGRPVS Trigger: GGAAACTGGTCTGCCATGCCAAGTTGTAAAGCATCT...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACGTGTTCTTTACAACTTaGCATGGCAGACCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHVFFTT*HGRPVS Trigger: GGAAACTGGTCTGCCATGCCAAGTTGTAAAGAACAC...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585162.1 |
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| CDS-3UTR TCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACAACTCGAGAACAAGATaGGCACTGGAGAAATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHNSRTR*ALEKSL Trigger: CAATGATTTCTCCAGTGCTCATCTTGTTCTCGAGTT...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR TCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACGGAATTGTTTCCAGCTaGTGGCTTATAAACACGAAG | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHGIVSS*WLINTK Trigger: CTTCGTGTTTATAAGCCATCAGCTGGAAACAATTCC...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR GCA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCAAACATTCAAAAACTaGTGTGTCCCGATAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GSLDEQETSVTFCVESENQTFKN*CVPIEG Trigger: TCCCTCTATCGGGACACAGCAGTTTTTGAATGTTTG...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACTTTACTCTCTCTCCTTaGTACACCACAGTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHFTLSP*YTTVAF Trigger: AAAAGCCACTGTGGTGTACCAAGGAGAGAGAGTAAA...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR TCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACATTAGGTTCCTTGGATaGACAAGAAACAAGTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHIRFLG*TRNKCD Trigger: GTCACACTTGTTTCTTGTTCATCCAAGGAACCTAAT...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS-3UTR GCA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACAGGTACTTTACAAGATaGTTTACAACTTGGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: GSLDEQETSVTFCVESENRYFTR*FTTWHG Trigger: GCCATGCCAAGTTGTAAAGCATCTTGTAAAGTACCT...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR GCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACTGGCTTTACATCGGATaGATCAGTTTTCCAAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHWLYIG*ISFPKS Trigger: GCTTTTTGGAAAACTGATGCATCCGATGTAAAGCCA...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS-3UTR CCA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACTTAACGGGACCACTGTaGAAAATGGTAAATCATCTG | + |
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Preference number: 4 (lower is better) Translates to: GSLDEQETSVTFCVESENLTGPL*KMVNHL Trigger: CAGATGATTTACCATTTTCCACAGTGGTCCCGTTAA...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACCAAAAGGACATACTCTaGGTGTACATTTCAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHQKDIL*VYISEC Trigger: ACACTCTGAAATGTACACCCAGAGTATGTCCTTTTG...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACCATGGCAGCCAAATGTaGCTTTATCCTTGTAATAAA | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHHGSQM*LYPCNK Trigger: TTTATTACAAGGATAAAGCCACATTTGGCTGCCATG...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS-3UTR GCA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACATAAAGTGTTGGTTTTaGAGGATAGTTCACAAATCC | + |
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Preference number: 4 (lower is better) Translates to: GSLDEQETSVTFCVESENIKCWF*RIVHKS Trigger: GGATTTGTGAACTATCCTGCAAAACCAACACTTTAT...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS-3UTR GCA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACATAAAGTGTTGGTTTTaGAGGATAGTTCACAAATCC | + |
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Preference number: 4 (lower is better) Translates to: SLDEQETSVTFCVESENHIKCWF*RIVHKS Trigger: GGATTTGTGAACTATCCTGCAAAACCAACACTTTAT...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS CCA 90 bp | CACAGACAGGAAGCTCCGGGCTCCATTTTCCTTCCTCAGTGCACTTaGCAGAATCAGCGCCATTCAGATAAAACCCAGTGTTACAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: HRQEAPGSIFLPQCT*QNQRHSDKTQCYKK Trigger: TTTCTTGTAACACTGGGTTTTATCTGAATGGCGCTGATTCTGCCAAGTGCACTGAGGAAGGAAAATGGAGCCCGGAGCTTCCTGTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000577982.1 ENST00000581797.5 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACGGTAAATCATCTGGCTaGGGACAGGTCCGTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GSLDEQETSVTFCVESENGKSSG*GQVRPA Trigger: TGCAGGACGGACCTGTCCCAAGCCAGATGATTTACC...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACCCTTCCTCAGTGCACTaGGCAGAATCAGCGCCATTC | + |
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Preference number: 5 (lower is better) Translates to: SLDEQETSVTFCVESENHPSSVH*AESAPF Trigger: GAATGGCGCTGATTCTGCCAAGTGCACTGAGGAAGG...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS TCA 90 bp | GAGAAAACTCGAGAACAAGATGAGCACTGGAGAAATCATTGTGGATaGGTCACACTGGCACTACCAAAGTGGTTTTCGTCTGCTGTAATC | + |
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Preference number: 5 (lower is better) Translates to: EKTREQDEHWRNHCG*VTLALPKWFSSAVI Trigger: GATTACAGCAGACGAAAACCACTTTGGTAGTGCCAGTGTGACTCATCCACAATGATTTCTCCAGTGCTCATCTTGTTCTCGAGTTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577982.1 |
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| CDS TCA 90 bp | ACATTCAAAAACTGCTGTGTCCCGATAGAGGGAATTGTTTCCAGCTaGTGGCTTATAAACACGAAGTGTTGCAAACGTAGGTATGGATGG | + |
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Preference number: 5 (lower is better) Translates to: TFKNCCVPIEGIVSS*WLINTKCCKRRYGW Trigger: CCATCCATACCTACGTTTGCAACACTTCGTGTTTATAAGCCATCAGCTGGAAACAATTCCCTCTATCGGGACACAGCAGTTTTTGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000577982.1 ENST00000581797.5 |
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| CDS-3UTR CAA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACGCACTGGAGAAATCATaGTGGATGAGTCACACTGGC | + |
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Preference number: 5 (lower is better) Translates to: SLDEQETSVTFCVESENHALEKS*WMSHTG Trigger: GCCAGTGTGACTCATCCACAATGATTTCTCCAGTGC...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACGTACATTTCAGAGTGTaGATGGGCCACAGTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SLDEQETSVTFCVESENHVHFRV*MGHSPV Trigger: CACAGGACTGTGGCCCATCAACACTCTGAAATGTAC...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACCTTTACTCTCTCTCCTaGGTACACCACAGTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLDEQETSVTFCVESENHLYSLS*VHHSGF Trigger: AAAGCCACTGTGGTGTACCAAGGAGAGAGAGTAAAG...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACTGTTCCTTGAAGCATTaGGGGACTTCGATAGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: GSLDEQETSVTFCVESENCSLKH*GTSIVP Trigger: TGGCACTATCGAAGTCCCCAAATGCTTCAAGGAACA...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACAGAGAACTGTGTTCCTaGAAGCATTTGGGGACTTCG | + |
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Preference number: 5 (lower is better) Translates to: GSLDEQETSVTFCVESENRELCS*KHLGTS Trigger: CGAAGTCCCCAAATGCTTCAAGGAACACAGTTCTCT...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACAAGATGCTTTACAACTaGGCATGGCAGACCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: SLDEQETSVTFCVESENHKMLYN*AWQTSF Trigger: GAAACTGGTCTGCCATGCCAAGTTGTAAAGCATCTT...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACTGTGTTCTTTACAACTaGGCATGGCAGACCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: GSLDEQETSVTFCVESENCVLYN*AWQTSF Trigger: GAAACTGGTCTGCCATGCCAAGTTGTAAAGAACACA...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585162.1 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACATCCATTGTCTGGTCTaGATGGGAATGGGCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: GSLDEQETSVTFCVESENIHCLV*MGMGIL Trigger: TAAAATGCCCATTCCCATCAAGACCAGACAATGGAT...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS-3UTR CAA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACATCCATTGTCTGGTCTaGATGGGAATGGGCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: SLDEQETSVTFCVESENHIHCLV*MGMGIL Trigger: TAAAATGCCCATTCCCATCAAGACCAGACAATGGAT...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACTCCAAACATCGCATGTaGTGGCAAACATTCAAAAAC | + |
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Preference number: 5 (lower is better) Translates to: GSLDEQETSVTFCVESENSKHRM*WQTFKN Trigger: GTTTTTGAATGTTTGCCACAACATGCGATGTTTGGA...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACGAAAAACTGATCGTGTaGGGATATTCAAAAGTCGTA | + |
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Preference number: 5 (lower is better) Translates to: GSLDEQETSVTFCVESENEKLIV*GYSKVV Trigger: TACGACTTTTGAATATCCCAACACGATCAGTTTTTC...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS-3UTR CAA 90 bp | TCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCACCCTTGTAATAAAGTGTaGGTTTTGCAGGATAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLDEQETSVTFCVESENHPCNKV*VLQDSS Trigger: TGAACTATCCTGCAAAACCAACACTTTATTACAAGG...GTGGTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTGGATGAACAAGAAACAAGTGTGACATTTTGTGTGGAATCTGAAAACCCTTGTAATAAAGTGTaGGTTTTGCAGGATAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: GSLDEQETSVTFCVESENPCNKV*VLQDSS Trigger: TGAACTATCCTGCAAAACCAACACTTTATTACAAGG...GTTTTCAGATTCCACACAAAATGTCACACTTGTTTCTTGTTCATCCAAGGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS CCA 72 bp | ACGGGACCACTGTGGAAAATGGTAAATCATCTGGCTTaGGACAGGCTGGCTAACACGGTGAAACCCCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: TGPLWKMVNHLA*DRLANTVKPRL Trigger: GAGACGGGGTTTCACCGTGTTAGCCAGCCTGTCCCAAGCCAGATGATTTACCATTTTCCACAGTGGTCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581797.5 |
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| CDS CCA 72 bp | GAAGCTCCGGGCTCCATTTTCCTTCCTCAGTGCACTTaGCAGAATCAGCGCCATTCAGATAAAACCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: EAPGSIFLPQCT*QNQRHSDKTQC Trigger: ACACTGGGTTTTATCTGAATGGCGCTGATTCTGCCAAGTGCACTGAGGAAGGAAAATGGAGCCCGGAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000577982.1 ENST00000581797.5 |
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| CDS CCA 72 bp | ATAAACACGAAGTGTTGCAAACGTAGGTATGGATGGTaGAGGGCAGATGATGGGAGCACAGACAGGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: INTKCCKRRYGW*RADDGSTDRKL Trigger: GAGCTTCCTGTCTGTGCTCCCATCATCTGCCCTCCACCATCCATACCTACGTTTGCAACACTTCGTGTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000577982.1 ENST00000581797.5 |
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| CDS CAA 72 bp | GCAAAAGGACATACTCTGGGTGTACATTTCAGAGTGTaGATGGGCCACAGTCCTGTGAGAGGGCAGATAAAC | + |
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Preference number: 6 (lower is better) Translates to: AKGHTLGVHFRV*MGHSPVRGQIN Trigger: GTTTATCTGCCCTCTCACAGGACTGTGGCCCATCAACACTCTGAAATGTACACCCAGAGTATGTCCTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000577982.1 ENST00000581797.5 |
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| CDS CCA 72 bp | CTCCTGGCTCATAGAATGTTTTTAACGGGACCACTGTaGAAAATGGTAAATCATCTGGCTTGGGACAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLAHRMFLTGPL*KMVNHLAWDRS Trigger: GGACCTGTCCCAAGCCAGATGATTTACCATTTTCCACAGTGGTCCCGTTAAAAACATTCTATGAGCCAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000577982.1 |
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| CDS CCA 72 bp | CTCCTGGCTCATAGAATGTTTTTAACGGGACCACTGTaGAAAATGGTAAATCATCTGGCTTGGGACAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLAHRMFLTGPL*KMVNHLAWDRL Trigger: CAGCCTGTCCCAAGCCAGATGATTTACCATTTTCCACAGTGGTCCCGTTAAAAACATTCTATGAGCCAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581797.5 |
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| CDS TCA 72 bp | AACTGCTGTGTCCCGATAGAGGGAATTGTTTCCAGCTaGTGGCTTATAAACACGAAGTGTTGCAAACGTAGG | + |
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Preference number: 6 (lower is better) Translates to: NCCVPIEGIVSS*WLINTKCCKRR Trigger: CCTACGTTTGCAACACTTCGTGTTTATAAGCCATCAGCTGGAAACAATTCCCTCTATCGGGACACAGCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000577982.1 ENST00000581797.5 |
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| CDS TCA 72 bp | CGAGAACAAGATGAGCACTGGAGAAATCATTGTGGATaGGTCACACTGGCACTACCAAAGTGGTTTTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: REQDEHWRNHCG*VTLALPKWFSS Trigger: AGACGAAAACCACTTTGGTAGTGCCAGTGTGACTCATCCACAATGATTTCTCCAGTGCTCATCTTGTTCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577982.1 |
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| CDS CCA 72 bp | CTTTACAACTTGGCATGGCAGACCAGTTTCCCAGTTTaGTACATTCTATTTCTTCCGGGCCATCCAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LYNLAWQTSFPV*YILFLPGHPEN Trigger: ATTCTCTGGATGGCCCGGAAGAAATAGAATGTACCAAACTGGGAAACTGGTCTGCCATGCCAAGTTGTAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000585162.1 |
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| CDS CAA 90 bp | GAACTGTGTTCTTTACAACTTGGCATGGCAGACCAGTTTCCCAGTTaGGTACATTCTATTTCTTCCGGGCCATCCAGAGAATATCCATCA | + |
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Preference number: 6 (lower is better) Translates to: ELCSLQLGMADQFPS*VHSISSGPSREYPS Trigger: TGATGGATATTCTCTGGATGGCCCGGAAGAAATAGAATGTACCAAACTGGGAAACTGGTCTGCCATGCCAAGTTGTAAAGAACACAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585162.1 |
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| CDS CAA 90 bp | TTACAAGATGCTTTACAACTTGGCATGGCAGACCAGTTTCCCAGTTaGGTACATTCTATTTCTTCCGGGCCATCCAGAGAATATCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LQDALQLGMADQFPS*VHSISSGPSREYPS Trigger: TGATGGATATTCTCTGGATGGCCCGGAAGAAATAGAATGTACCAAACTGGGAAACTGGTCTGCCATGCCAAGTTGTAAAGCATCTTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS CCA 72 bp | GGCCATCCAGAGAATATCCATCATGGCAGCCAAATGTaGCTTTATCCTTGTAATAAAGTGTTGGTTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GHPENIHHGSQM*LYPCNKVLVLQ Trigger: CTGCAAAACCAACACTTTATTACAAGGATAAAGCCACATTTGGCTGCCATGATGGATATTCTCTGGATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000581797.5 ENST00000585162.1 |
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| CDS CAA 90 bp | TCCATGTGTCGTGCAGGTAATTGTATCATTTCCAAACATCGCATGTaGTGGCAAACATTCAAAAACTGCTGTGTCCCGATAGAGGGAATT | + |
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Preference number: 6 (lower is better) Translates to: SMCRAGNCIISKHRM*WQTFKNCCVPIEGI Trigger: AATTCCCTCTATCGGGACACAGCAGTTTTTGAATGTTTGCCACAACATGCGATGTTTGGAAATGATACAATTACCTGCACGACACATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000205948.11 ENST00000581797.5 |
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| CDS CAA 90 bp | CATGGCAGCCAAATGTGGCTTTATCCTTGTAATAAAGTGTTGGTTTaGCAGGATAGTTCACAAATCCATTGTCTGGTCTTGATGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: HGSQMWLYPCNKVLV*QDSSQIHCLVLMGM Trigger: CATTCCCATCAAGACCAGACAATGGATTTGTGAACTATCCTGCAAAACCAACACTTTATTACAAGGATAAAGCCACATTTGGCTGCCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000581797.5 ENST00000585162.1 |
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| CDS CAA 90 bp | ATCCATCATGGCAGCCAAATGTGGCTTTATCCTTGTAATAAAGTGTaGGTTTTGCAGGATAGTTCACAAATCCATTGTCTGGTCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: IHHGSQMWLYPCNKV*VLQDSSQIHCLVLM Trigger: CATCAAGACCAGACAATGGATTTGTGAACTATCCTGCAAAACCAACACTTTATTACAAGGATAAAGCCACATTTGGCTGCCATGATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000581797.5 ENST00000585162.1 |
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| CDS CCA 72 bp | GCAGCCAAATGTGGCTTTATCCTTGTAATAAAGTGTTaGTTTTGCAGGATAGTTCACAAATCCATTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: AAKCGFILVIKC*FCRIVHKSIVW Trigger: CCAGACAATGGATTTGTGAACTATCCTGCAAAACCAACACTTTATTACAAGGATAAAGCCACATTTGGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000581797.5 ENST00000585162.1 |
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| CDS CCA 72 bp | TCACAGGTACTTTACAAGATGCTTTACAACTTGGCATaGCAGACCAGTTTCCCAGTTTGGTACATTCTATTT | + |
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Preference number: 6 (lower is better) Translates to: SQVLYKMLYNLA*QTSFPVWYILF Trigger: AAATAGAATGTACCAAACTGGGAAACTGGTCTGCCATGCCAAGTTGTAAAGCATCTTGTAAAGTACCTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000205948.11 |
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| CDS CCA 72 bp | AAAAAGCCAGAGAACTGTGTTCTTTACAACTTGGCATaGCAGACCAGTTTCCCAGTTTGGTACATTCTATTT | + |
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Preference number: 6 (lower is better) Translates to: KKPENCVLYNLA*QTSFPVWYILF Trigger: AAATAGAATGTACCAAACTGGGAAACTGGTCTGCCATGCCAAGTTGTAAAGAACACAGTTCTCTGGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585162.1 |
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| CDS CAA 72 bp | GGCAGCCAAATGTGGCTTTATCCTTGTAATAAAGTGTaGGTTTTGCAGGATAGTTCACAAATCCATTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GSQMWLYPCNKV*VLQDSSQIHCL Trigger: CAGACAATGGATTTGTGAACTATCCTGCAAAACCAACACTTTATTACAAGGATAAAGCCACATTTGGCTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000581797.5 ENST00000585162.1 |
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| CDS CAA 72 bp | CAAATGTGGCTTTATCCTTGTAATAAAGTGTTGGTTTaGCAGGATAGTTCACAAATCCATTGTCTGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: QMWLYPCNKVLV*QDSSQIHCLVL Trigger: CAAGACCAGACAATGGATTTGTGAACTATCCTGCAAAACCAACACTTTATTACAAGGATAAAGCCACATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000205948.11 ENST00000581797.5 ENST00000585162.1 |
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