Pregenerated sensors for APOF (Homo sapiens)
Ensembl gene IDs: ENSG00000175336Ensembl transcript IDs: ENST00000398189.4
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATAGAGGCCACGCATGTCTaGAGCAGAGTACCCACACAG | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARIEATHV*SRVPTQ Trigger: CTGTGTGGGTACTCTGCTCCAGACATGCGTGGCCTC...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATACCCTCAAACCCTCCTTaGTGGTCTCCGGCTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARIPSNPP*WSPAER Trigger: TCTCTCAGCCGGAGACCACCAAGGAGGGTTTGAGGG...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATACTCAGCCTCTCACAGTaGTGGGATTACAGGCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARILSLSQ*WDYRRE Trigger: CTCACGCCTGTAATCCCAGCACTGTGAGAGGCTGAG...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATAACTCCTGGCAGCAGCTaGACTACATTGTGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARITPGSS*TTLCTA Trigger: AGCTGTGCACAATGTAGTCCAGCTGCTGCCAGGAGT...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATATCAAACCCTCCTTGGTaGTCTCCGGCTGAGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARISNPPW*SPAERC Trigger: ACATCTCTCAGCCGGAGACCACCAAGGAGGGTTTGA...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATACACTCACATCTGAGATaGCCCTCAAACCCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARIHSHLR*PSNPPW Trigger: CCAAGGAGGGTTTGAGGGCCATCTCAGATGTGAGTG...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATATTTGGGTGCAGAAATTaGCAGGACAAGGGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARIFGCRN*QDKGSE Trigger: CTCAGACCCCTTGTCCTGCCAATTTCTGCACCCAAA...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATATACTGGATCAACTGCTaGACCCCAGACCTTAATGCA | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARIYWINC*TPDLNA Trigger: TGCATTAAGGTCTGGGGTTCAGCAGTTGATCCAGTA...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATAAGCTGGACTACATTGTaGACAGCTTGCTCCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARISWTTL*TACSFS Trigger: TGAGAAGGAGCAAGCTGTGCACAATGTAGTCCAGCT...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATACTGACATCCCAGCCATaGTCATCAGAAGGTCATATC | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARILTSQP*SSEGHI Trigger: GATATGACCTTCTGATGACCATGGCTGGGATGTCAG...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | GATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTCCTCCCAGGCTCAGGTaGTTCTCCCGCCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DSKPNPVTSTPKHLRSYVPPRLR*FSRLSL Trigger: GAGGCTGAGGCGGGAGAATCACCTGAGCCTGGGAGG...AACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATACATAATACAAAGCTGTaGCCAGGTTGTAGAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: ASASQVVGTTSVHNSARIHNTKL*PGCRRF Trigger: GAACCTTCTACAACCTGGGCACAGCTTTGTATTATG...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | AAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTGTCCCTGGCTAACAGCTaGAGAGCAGAGGCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KPNPVTSTPKHLRSYVLLSLANS*RAEARA Trigger: AGCCCTGGCCTCTGCTCTGCAGCTGTTAGCCAGGGA...CAGTAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | TCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTCGGCCTCGTTCCCTaGCCTTGCCCAGGCAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SKPNPVTSTPKHLRSYVLLGLVP*PCPGSF Trigger: AAAACTGCCTGGGCAAGGCCAGGGAACGAGGCCGAG...TAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | AACATTTACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATGCCCGACCCTTCCTGTaGTTTGCTGCTCCCTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: NIYVLTFYCTAFLLDKSDARPFL*FAAPWL Trigger: TAGCCAGGGAGCAGCAAAGCACAGGAAGGGTCGGGC...ATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGTAAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTGGCTTACCAAGAACTTaGGTAGAGGGGCCATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RFETKPCDFNTQTFTFLRGLPRT*VEGPCG Trigger: GCCACATGGCCCCTCTACCCAAGTTCTTGGTAAGCC...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | AACATTTACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATGCCCAAACATCAGCCTaGCAACCAGCTTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NIYVLTFYCTAFLLDKSDAQTSA*QPASSR Trigger: CCTGGAGGAAGCTGGTTGTCAGGCTGATGTTTGGGC...ATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGTAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | ACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATTAAAATTGGCCAGGGCTTCCACTaGCACGTTCCTCTCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TFLRFTVQPSSWINQIKIGQGFH*HVPLCA Trigger: AGCACAGAGAGGAACGTGTCAGTGGAAGCCCTGGCC...AATTTTAATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTGGAGCCCTCGAAGATaGTGGATGAGGACCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: RFETKPCDFNTQTFTFLRWSPRR*WMRTCV Trigger: TACACAGGTCCTCATCCAGCATCTTCGAGGGCTCCA...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTCCTCTCTGTGCTTCTaGCTTTCTGGAGCCCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: RFETKPCDFNTQTFTFLRSSLCF*LSGALE Trigger: TTCGAGGGCTCCAGAAAGGCAGAAGCACAGAGAGGA...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTAGCCCTCGAAGATGCTaGATGAGGACCTGTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: RFETKPCDFNTQTFTFLRSPRRC*MRTCVA Trigger: TGCTACACAGGTCCTCATCCAGCATCTTCGAGGGCT...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTACACAGTCCAGTCATTaGGAAGTGAGACTGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RFETKPCDFNTQTFTFLRTQSSH*EVRLPW Trigger: CCAAGGCAGTCTCACTTCTCAATGACTGGACTGTGT...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | AAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTGTTGGTGGTCTCCGGCTaGGAGATGTTTGCGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KPNPVTSTPKHLRSYVLLLVVSG*EMFASF Trigger: GAAAGACGCAAACATCTCTCAGCCGGAGACCACCAA...CAGTAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | TCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACAAGTCACTCACATCTaGGATGGCCCTCAAACCCTC | + |
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Preference number: 4 (lower is better) Translates to: SKPNPVTSTPKHLRSYVLQVTHI*DGPQTL Trigger: GAGGGTTTGAGGGCCATCTCAGATGTGAGTGACTTG...TAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | TCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTGATCTTGAACTCCTaGCCTCAGGTGATCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: SKPNPVTSTPKHLRSYVLLILNS*PQVIIP Trigger: CGGGATGATCACCTGAGGTCAGGAGTTCAAGATCAG...TAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | AACATTTACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATACCCTTCCTGTGCTTTaGTGCTCCCTGGCTAACAGC | + |
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Preference number: 4 (lower is better) Translates to: NIYVLTFYCTAFLLDKSDTLPVL*CSLANS Trigger: GCTGTTAGCCAGGGAGCAGCAAAGCACAGGAAGGGT...ATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGTAAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTGCTTTCCATATGAAGTaGCATCCACAGGGTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RFETKPCDFNTQTFTFLRAFHMK*HPQGAA Trigger: TGCTGCACCCTGTGGATGCCACTTCATATGGAAAGC...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | AAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTGTCTGAGGAGGGTGTCTaGGATTCCAAGGACAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: KPNPVTSTPKHLRSYVLLSEEGV*DSKDKG Trigger: TCCCTTGTCCTTGGAATCCCAGACACCCTCCTCAGA...CAGTAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | TCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTATGTCTGCTTTCCATATaGAGTGGCATCCACAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SKPNPVTSTPKHLRSYVLCLLSI*SGIHRV Trigger: CACCCTGTGGATGCCACTTCATATGGAAAGCAGACA...TAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | TCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTAAGTCATAGCTCTTaGTTATGGCCCACCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SKPNPVTSTPKHLRSYVLLSHSS*LWPTPS Trigger: ACTGGGGGTGGGCCATAATCAAGAGCTATGACTTAG...TAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | ACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATTAAAATTCTTCCTGTGCTTTGCTaGTCCCTGGCTAACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TFLRFTVQPSSWINQIKILPVLC*SLANSC Trigger: GCAGCTGTTAGCCAGGGAGCAGCAAAGCACAGGAAG...AATTTTAATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | ACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATTAAAATTGTGCTTCTGCCTTTCTaGAGCCCTCGAAGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TFLRFTVQPSSWINQIKIVLLPF*SPRRCW Trigger: CCAGCATCTTCGAGGGCTCCAGAAAGGCAGAAGCAC...AATTTTAATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | ACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATTAAAATTTGCTTTGCTGCTCCCTaGCTAACAGCTGCAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TFLRFTVQPSSWINQIKICFAAP*LTAAEQ Trigger: CTGCTCTGCAGCTGTTAGCCAGGGAGCAGCAAAGCA...AATTTTAATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | AAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTGCCAGTCATTGAGAAGTaGGACTGCCTTGGTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: KPNPVTSTPKHLRSYVLLPVIEK*DCLGRF Trigger: AAACCTACCAAGGCAGTCTCACTTCTCAATGACTGG...CAGTAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CCA 90 bp | ACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATTAAAATTCATATCCCAGATCTATaGCCCCATCTCGGCCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: TFLRFTVQPSSWINQIKIHIPDL*PHLGLV Trigger: AACGAGGCCGAGATGGGGCCATAGATCTGGGATATG...AATTTTAATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | ACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATTAAAATTGCTGAAACCAGGCAGTaGCTTTGGGTGCAGAAATTG | + |
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Preference number: 4 (lower is better) Translates to: TFLRFTVQPSSWINQIKIAETRQ*LWVQKL Trigger: CAATTTCTGCACCCAAAGTCACTGCCTGGTTTCAGC...AATTTTAATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR TCA 90 bp | AAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTGCGAAACCAAACCCTGTaGCTTCAACACCCAAACATT | + |
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Preference number: 4 (lower is better) Translates to: KPNPVTSTPKHLRSYVLLRNQTL*LQHPNI Trigger: AATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCG...CAGTAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | AACATTTACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATTTCCTGATCCTGTTCTaGCTAGTTCTGTGTCCCATG | + |
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Preference number: 4 (lower is better) Translates to: NIYVLTFYCTAFLLDKSDFLILF*LVLCPM Trigger: CATGGGACACAGAACTAGGCAGAACAGGATCAGGAA...ATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGTAAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | AAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTGCGGCTGAGAGATGTTTaGGTCTTTCTGATCTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: KPNPVTSTPKHLRSYVLLRLRDV*VFLILV Trigger: TACCAAGATCAGAAAGACGCAAACATCTCTCAGCCG...CAGTAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | TCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTAAAGGACAAGGGAAAGTaGATCAAGACATTTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SKPNPVTSTPKHLRSYVLKDKGK*IKTFVC Trigger: GCAGACAAATGTCTTGATGCACTTTCCCTTGTCCTT...TAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR GCA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTATCAAGACATTTGTCTaGTTTCCATATGAAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RFETKPCDFNTQTFTFLRIKTFV*FPYEVA Trigger: TGCCACTTCATATGGAAAGCAGACAAATGTCTTGAT...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 90 bp | TCACAGTCCTCTGTCGGGAGGGAGCGCCCGACCCTTCCTGTGCTTTaGTGCTCCCTGGCTAACAGCTGCAGAGCAGAGGCCAGGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SQSSVGRERPTLPVL*CSLANSCRAEARAS Trigger: GGAAGCCCTGGCCTCTGCTCTGCAGCTGTTAGCCAGGGAGCAGCAAAGCACAGGAAGGGTCGGGCGCTCCCTCCCGACAGAGGACTGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 90 bp | GAGCGCCCGACCCTTCCTGTGCTTTGCTGCTCCCTGGCTAACAGCTaGAGAGCAGAGGCCAGGGCTTCCACTGACACGTTCCTCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ERPTLPVLCCSLANS*RAEARASTDTFLSV Trigger: CACAGAGAGGAACGTGTCAGTGGAAGCCCTGGCCTCTGCTCTGCAGCTGTTAGCCAGGGAGCAGCAAAGCACAGGAAGGGTCGGGCGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 90 bp | GGGGCCATGTGGCTGAAACCAGGCAGTGACTTTGGGTGCAGAAATTaGCAGGACAAGGGGTCTGAGGAGGGTGTCTGGGATTCCAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: GAMWLKPGSDFGCRN*QDKGSEEGVWDSKD Trigger: GTCCTTGGAATCCCAGACACCCTCCTCAGACCCCTTGTCCTGCCAATTTCTGCACCCAAAGTCACTGCCTGGTTTCAGCCACATGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 90 bp | CTGACATCCCAGCCATGGTCATCAGAAGGTCATATCCCAGATCTATaGCCCCATCTCGGCCTCGTTCCCTGGCCTTGCCCAGGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LTSQPWSSEGHIPDL*PHLGLVPWPCPGSF Trigger: AAAACTGCCTGGGCAAGGCCAGGGAACGAGGCCGAGATGGGGCCATAGATCTGGGATATGACCTTCTGATGACCATGGCTGGGATGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS TCA 90 bp | TTAGAGCCAGGCTTACCAAGAACTTGGGTAGAGGGGCCATGTGGCTaGAACCAGGCAGTGACTTTGGGTGCAGAAATTGGCAGGACAAGG | + |
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Preference number: 5 (lower is better) Translates to: LEPGLPRTWVEGPCG*NQAVTLGAEIGRTR Trigger: CCTTGTCCTGCCAATTTCTGCACCCAAAGTCACTGCCTGGTTTCAGCCACATGGCCCCTCTACCCAAGTTCTTGGTAAGCCTGGCTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 90 bp | TTCCTTAGAGCCAGGCTTACCAAGAACTTGGGTAGAGGGGCCATGTaGCTGAAACCAGGCAGTGACTTTGGGTGCAGAAATTGGCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: FLRARLTKNLGRGAM*LKPGSDFGCRNWQD Trigger: GTCCTGCCAATTTCTGCACCCAAAGTCACTGCCTGGTTTCAGCCACATGGCCCCTCTACCCAAGTTCTTGGTAAGCCTGGCTCTAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS TCA 90 bp | CGCATGTCTGGAGCAGAGTACCCACACAGTCCAGTCATTGAGAAGTaGGACTGCCTTGGTAGGTTTGATCGCTTCCTGATCCTGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: RMSGAEYPHSPVIEK*DCLGRFDRFLILFC Trigger: GCAGAACAGGATCAGGAAGCGATCAAACCTACCAAGGCAGTCTCACTTCTCAATGACTGGACTGTGTGGGTACTCTGCTCCAGACATGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 90 bp | GATGGCCCTCAAACCCTCCTTGGTGGTCTCCGGCTGAGAGATGTTTaGGTCTTTCTGATCTTGGTAATACTGGATCAACTGCTGAACCCC | + |
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Preference number: 5 (lower is better) Translates to: DGPQTLLGGLRLRDV*VFLILVILDQLLNP Trigger: GGGGTTCAGCAGTTGATCCAGTATTACCAAGATCAGAAAGACGCAAACATCTCTCAGCCGGAGACCACCAAGGAGGGTTTGAGGGCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | GCCTCAGCCTCCCAGGTAGTTGGGACTACAAGCGTGCATAACTCCGCCAGGATACTTGCCCAGGCAGTTTaGAGTAGCATAATACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: ASASQVVGTTSVHNSARILAQAV*SSIIQS Trigger: GCTTTGTATTATGCTACTCAAAACTGCCTGGGCAAG...TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 90 bp | CTTCCAAGTCACTCACATCTGAGATGGCCCTCAAACCCTCCTTGGTaGTCTCCGGCTGAGAGATGTTTGCGTCTTTCTGATCTTGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: LPSHSHLRWPSNPPW*SPAERCLRLSDLGN Trigger: ATTACCAAGATCAGAAAGACGCAAACATCTCTCAGCCGGAGACCACCAAGGAGGGTTTGAGGGCCATCTCAGATGTGAGTGACTTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS TCA 90 bp | TATGAAAGAAGCCAGAGTAGTTGTTTCTTCCAAGTCACTCACATCTaGGATGGCCCTCAAACCCTCCTTGGTGGTCTCCGGCTGAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: YERSQSSCFFQVTHI*DGPQTLLGGLRLRD Trigger: ATCTCTCAGCCGGAGACCACCAAGGAGGGTTTGAGGGCCATCTCAGATGTGAGTGACTTGGAAGAAACAACTACTCTGGCTTCTTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 90 bp | AAGGGGTCTGAGGAGGGTGTCTGGGATTCCAAGGACAAGGGAAAGTaGATCAAGACATTTGTCTGCTTTCCATATGAAGTGGCATCCACA | + |
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Preference number: 5 (lower is better) Translates to: KGSEEGVWDSKDKGK*IKTFVCFPYEVAST Trigger: TGTGGATGCCACTTCATATGGAAAGCAGACAAATGTCTTGATGCACTTTCCCTTGTCCTTGGAATCCCAGACACCCTCCTCAGACCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | AAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTACTGAGGCTTACCAAGAACTaGGGTAGAGGGGCCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: KPNPVTSTPKHLRSYVLLRLTKN*GRGAMW Trigger: CCACATGGCCCCTCTACCCAAGTTCTTGGTAAGCCT...CAGTAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTAGCAGCTGGACTACATaGTGCACAGCTTGCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: RFETKPCDFNTQTFTFLRSSWTT*CTACSF Trigger: GAAGGAGCAAGCTGTGCACAATGTAGTCCAGCTGCT...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | AGATTCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTCACACAGTCCAGTCATaGAGAAGTGAGACTGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RFETKPCDFNTQTFTFLRHTVQS*RSETAL Trigger: CAAGGCAGTCTCACTTCTCAATGACTGGACTGTGTG...ACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | TCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTAAGAAGTGAGACTGCCTaGGTAGGTTTGATCGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SKPNPVTSTPKHLRSYVLRSETA*VGLIAS Trigger: GGAAGCGATCAAACCTACCAAGGCAGTCTCACTTCT...TAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | AACATTTACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATCCGGCTGAGAGATGTTaGCGTCTTTCTGATCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: NIYVLTFYCTAFLLDKSDPAERC*RLSDLG Trigger: ACCAAGATCAGAAAGACGCAAACATCTCTCAGCCGG...ATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGTAAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | TCGAAACCAAACCCTGTGACTTCAACACCCAAACATTTACGTTCTTACGTTTTATACATTGTGCACAGCTaGCTCCTTCTCATTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: SKPNPVTSTPKHLRSYVLYIVHS*LLLILT Trigger: TGTGAGAATGAGAAGGAGCAAGCTGTGCACAATGTA...TAAAACGTAAGAACGTAAATGTTTGGGTGTTGAAGTCACAGGGTTTGGTTTCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | AACATTTACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATGAGGAAAGGAGATATTaGCTTTCCCCTATGATCAGT | + |
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Preference number: 5 (lower is better) Translates to: NIYVLTFYCTAFLLDKSDEERRY*LSPMIS Trigger: ACTGATCATAGGGGAAAGCAAATATCTCCTTTCCTC...ATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGTAAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS-3UTR CAA 90 bp | ACGTTCTTACGTTTTACTGTACAGCCTTCCTCCTGGATAAATCAGATTAAAATTTGCGTCTTTCTGATCTaGGTAATACTGGATCAACTG | + |
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Preference number: 5 (lower is better) Translates to: TFLRFTVQPSSWINQIKICVFLI*VILDQL Trigger: CAGTTGATCCAGTATTACCAAGATCAGAAAGACGCA...AATTTTAATCTGATTTATCCAGGAGGAAGGCTGTACAGTAAAACGTAAGAACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 72 bp | GTCGGGAGGGAGCGCCCGACCCTTCCTGTGCTTTGCTaGTCCCTGGCTAACAGCTGCAGAGCAGAGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VGRERPTLPVLC*SLANSCRAEAR Trigger: CCTGGCCTCTGCTCTGCAGCTGTTAGCCAGGGAGCAGCAAAGCACAGGAAGGGTCGGGCGCTCCCTCCCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 72 bp | TCTGTCGGGAGGGAGCGCCCGACCCTTCCTGTGCTTTaGTGCTCCCTGGCTAACAGCTGCAGAGCAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SVGRERPTLPVL*CSLANSCRAEA Trigger: GGCCTCTGCTCTGCAGCTGTTAGCCAGGGAGCAGCAAAGCACAGGAAGGGTCGGGCGCTCCCTCCCGACAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 72 bp | GGGAGCGCCCGACCCTTCCTGTGCTTTGCTGCTCCCTaGCTAACAGCTGCAGAGCAGAGGCCAGGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GSARPFLCFAAP*LTAAEQRPGLP Trigger: TGGAAGCCCTGGCCTCTGCTCTGCAGCTGTTAGCCAGGGAGCAGCAAAGCACAGGAAGGGTCGGGCGCTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 72 bp | AGTCCTCTGTCGGGAGGGAGCGCCCGACCCTTCCTGTaGTTTGCTGCTCCCTGGCTAACAGCTGCAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SPLSGGSARPFL*FAAPWLTAAEQ Trigger: CTGCTCTGCAGCTGTTAGCCAGGGAGCAGCAAAGCACAGGAAGGGTCGGGCGCTCCCTCCCGACAGAGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 72 bp | CAGCCATGGTCATCAGAAGGTCATATCCCAGATCTATaGCCCCATCTCGGCCTCGTTCCCTGGCCTTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QPWSSEGHIPDL*PHLGLVPWPCP Trigger: TGGGCAAGGCCAGGGAACGAGGCCGAGATGGGGCCATAGATCTGGGATATGACCTTCTGATGACCATGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 72 bp | CTCTCTGTGCTTCTGCCTTTCTGGAGCCCTCGAAGATaGTGGATGAGGACCTGTGTAGCATTCACACCACCC | + |
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Preference number: 6 (lower is better) Translates to: LSVLLPFWSPRR*WMRTCVAFTPP Trigger: GGGTGGTGTGAATGCTACACAGGTCCTCATCCAGCATCTTCGAGGGCTCCAGAAAGGCAGAAGCACAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 72 bp | TCTGTGCTTCTGCCTTTCTGGAGCCCTCGAAGATGCTaGATGAGGACCTGTGTAGCATTCACACCACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SVLLPFWSPRRC*MRTCVAFTPPW Trigger: CCAGGGTGGTGTGAATGCTACACAGGTCCTCATCCAGCATCTTCGAGGGCTCCAGAAAGGCAGAAGCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CAA 72 bp | TCCAGGGCATTCCTTAGAGCCAGGCTTACCAAGAACTaGGGTAGAGGGGCCATGTGGCTGAAACCAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SRAFLRARLTKN*GRGAMWLKPGS Trigger: ACTGCCTGGTTTCAGCCACATGGCCCCTCTACCCAAGTTCTTGGTAAGCCTGGCTCTAAGGAATGCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS TCA 72 bp | AGCCAGAGTAGTTGTTTCTTCCAAGTCACTCACATCTaGGATGGCCCTCAAACCCTCCTTGGTGGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SQSSCFFQVTHI*DGPQTLLGGLR Trigger: CCGGAGACCACCAAGGAGGGTTTGAGGGCCATCTCAGATGTGAGTGACTTGGAAGAAACAACTACTCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 72 bp | CACTCACATCTGAGATGGCCCTCAAACCCTCCTTGGTaGTCTCCGGCTGAGAGATGTTTGCGTCTTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: HSHLRWPSNPPW*SPAERCLRLSD Trigger: ATCAGAAAGACGCAAACATCTCTCAGCCGGAGACCACCAAGGAGGGTTTGAGGGCCATCTCAGATGTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 72 bp | AGTCACTCACATCTGAGATGGCCCTCAAACCCTCCTTaGTGGTCTCCGGCTGAGAGATGTTTGCGTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SHSHLRWPSNPP*WSPAERCLRLS Trigger: AGAAAGACGCAAACATCTCTCAGCCGGAGACCACCAAGGAGGGTTTGAGGGCCATCTCAGATGTGAGTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CAA 90 bp | AGATGGCCCTCAAACCCTCCTTGGTGGTCTCCGGCTGAGAGATGTTaGCGTCTTTCTGATCTTGGTAATACTGGATCAACTGCTGAACCC | + |
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Preference number: 6 (lower is better) Translates to: RWPSNPPWWSPAERC*RLSDLGNTGSTAEP Trigger: GGGTTCAGCAGTTGATCCAGTATTACCAAGATCAGAAAGACGCAAACATCTCTCAGCCGGAGACCACCAAGGAGGGTTTGAGGGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS TCA 72 bp | GGAGCAGAGTACCCACACAGTCCAGTCATTGAGAAGTaGGACTGCCTTGGTAGGTTTGATCGCTTCCTGATC | + |
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Preference number: 6 (lower is better) Translates to: GAEYPHSPVIEK*DCLGRFDRFLI Trigger: GATCAGGAAGCGATCAAACCTACCAAGGCAGTCTCACTTCTCAATGACTGGACTGTGTGGGTACTCTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CAA 72 bp | GGTCTCCGGCTGAGAGATGTTTGCGTCTTTCTGATCTaGGTAATACTGGATCAACTGCTGAACCCCAGACCT | + |
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Preference number: 6 (lower is better) Translates to: GLRLRDVCVFLI*VILDQLLNPRP Trigger: AGGTCTGGGGTTCAGCAGTTGATCCAGTATTACCAAGATCAGAAAGACGCAAACATCTCTCAGCCGGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS GCA 72 bp | CAAACCCTCCTTGGTGGTCTCCGGCTGAGAGATGTTTaGGTCTTTCTGATCTTGGTAATACTGGATCAACTG | + |
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Preference number: 6 (lower is better) Translates to: QTLLGGLRLRDV*VFLILVILDQL Trigger: CAGTTGATCCAGTATTACCAAGATCAGAAAGACGCAAACATCTCTCAGCCGGAGACCACCAAGGAGGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CCA 72 bp | AGTGCATCAAGACATTTGTCTGCTTTCCATATGAAGTaGCATCCACAGGGTGCAGCAGGAGGTAGCAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: SASRHLSAFHMK*HPQGAAGGSKV Trigger: TACTTTGCTACCTCCTGCTGCACCCTGTGGATGCCACTTCATATGGAAAGCAGACAAATGTCTTGATGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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| CDS CAA 72 bp | TCAAACCCTCCTTGGTGGTCTCCGGCTGAGAGATGTTaGCGTCTTTCTGATCTTGGTAATACTGGATCAACT | + |
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Preference number: 6 (lower is better) Translates to: SNPPWWSPAERC*RLSDLGNTGST Trigger: AGTTGATCCAGTATTACCAAGATCAGAAAGACGCAAACATCTCTCAGCCGGAGACCACCAAGGAGGGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398189.4 |
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