Pregenerated sensors for APOE (Homo sapiens)
Ensembl gene IDs: ENSG00000130203Ensembl transcript IDs: ENST00000252486.9, ENST00000425718.1, ENST00000434152.5, ENST00000446996.5, ENST00000485628.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCAGGGGCGGCGCTGGTaGCCACGGCAGCCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRQGRRW*PRQPAP Trigger: AGGTGCAGGCTGCCGTGGGCACCAGCGCCGCCCCTG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCAGCGCTGGCCGCTCTaGCACTCGGTCTGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRQRWPL*HSVCWR Trigger: GCGCCAGCAGACCGAGTGGCAGAGCGGCCAGCGCTG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACCTCGCCGCGGTACTaGACCAGGCGGCCGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRTSPRY*TRRPHT Trigger: CGTGTGCGGCCGCCTGGTGCAGTACCGCGGCGAGGT...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGGGTCGCGGGTCCGGCTaGCCATCTCCTCCATCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRGRGSG*PSPPSA Trigger: CGCGGATGGAGGAGATGGGCAGCCGGACCCGCGACC...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGTCTCCCGCTGCAGGCTaGGCGGAGGCAGGAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRSPAAG*AEAGGT Trigger: CGTGCCTCCTGCCTCCGCGCAGCCTGCAGCGGGAGA...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGGACAGGGTCTCCCGCTaGAGGCTGCGCGGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRDRVSR*RLRGGR Trigger: CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTC...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGTGCCACTCGGTCTGCTaGCGCAGCTCGGGCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRCHSVC*RSSGSG Trigger: GCCGGAGCCCGAGCTGCGCCAGCAGACCGAGTGGCA...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCGCTCCTGTAGCGGCTaGCCGGCCAGGGAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRRSCSG*PAREPT Trigger: TGTGGGCTCCCTGGCCGGCCAGCCGCTACAGGAGCG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGCACAGGGGCGGCGCTaGTGCCCACGGCAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGAQGRR*CPRQPA Trigger: TGCAGGCTGCCGTGGGCACCAGCGCCGCCCCTGTGC...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGGCACGGGGTGGCGTaGGGTCGCATGGCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRRHGVA*GRMAAG Trigger: GCCTGCAGCCATGCGACCCCACGCCACCCCGTGCCT...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGGCAGGAGGCACGGGGTaGCGTGGGGTCGCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRAGGTG*RGVAWL Trigger: CAGCCATGCGACCCCACGCCACCCCGTGCCTCCTGC...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACGGGCCTGCGCCGCCTaGAGCTCCTTGGACAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGRACAA*SSLDSR Trigger: ACGGCTGTCCAAGGAGCTGCAGGCGGCGCAGGCCCG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCCGCCTGCAGCTCCTTaGACAGCCGTGCCCGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRPPAAP*TAVPAS Trigger: AGACGCGGGCACGGCTGTCCAAGGAGCTGCAGGCGG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGATCGCGGGCCCCGGCCTaGTACACTGCCAGGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGSRAPA*YTARRF Trigger: GAAGCGCCTGGCAGTGTACCAGGCCGGGGCCCGCGA...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCTCTTGAGGCGGGCCTaGAAGGCCTCGGCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRLLRRA*KASACR Trigger: CCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR TCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGGCTCGAACCAGCTCTTaGGGCGGGCCTGGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRARTSS*GGPGRP Trigger: AGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGC...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACTCTGCCACTCGGTCTaGTGGCGCAGCTCGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGLCHSV*WRSSGS Trigger: GGAGCCCGAGCTGCGCCAGCAGACCGAGTGGCAGAG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGATGGCCGAGCATGGCCTaGACCTCGCCGCGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGWPSMA*TSPRYC Trigger: GCAGTACCGCGGCGAGGTGCAGGCCATGCTCGGCCA...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGCCGCTTACGCAGCTTaGGCAGGTGGGAGGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGAAYAA*AGGRRG Trigger: GCCTCGCCTCCCACCTGCGCAAGCTGCGTAAGCGGC...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCCCGGCCTGGTACACTaGCAGGCGCTTCTGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRPGLVH*QALLQV Trigger: GACCTGCAGAAGCGCCTGGCAGTGTACCAGGCCGGG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCGCACCTCCGCCACCTaGTCCTTCACCTCGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRRTSAT*SFTSSR Trigger: CCTGGACGAGGTGAAGGAGCAGGTGGCGGAGGTGCG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGGCCTGCAGGCGTATCTaGTGGGCCTGCTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRACRRI*WACSSS Trigger: GCTGGAGGAGCAGGCCCAGCAGATACGCCTGCAGGC...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACCGGCCCACTGGCGCTaGATGTCTTCCACCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGPAHWR*MSSTRG Trigger: GCCCCTGGTGGAAGACATGCAGCGCCAGTGGGCCGG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGTGCCCACGGCAGCCTaGACCTTCTCCACCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGVPTAA*TFSTSP Trigger: CGGGCTGGTGGAGAAGGTGCAGGCTGCCGTGGGCAC...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGCCAGTTCCCAGCGCTaGCCGCTCTGCCACTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGASSQR*PLCHSV Trigger: GACCGAGTGGCAGAGCGGCCAGCGCTGGGAACTGGC...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACCTGCTCCTCCAGCTTaGCGCGCACCTCCGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGPAPPA*RAPPPP Trigger: AGGTGGCGGAGGTGCGCGCCAAGCTGGAGGAGCAGG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGTGGCGTGGGGTCGCATaGCTGCAGGCTTCGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRWRGVA*LQASAF Trigger: GAACGCCGAAGCCTGCAGCCATGCGACCCCACGCCA...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACTGCCAGGCGCTTCTaGAGGTCATCGGCATCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRTARRF*RSSASR Trigger: CCGCGATGCCGATGACCTGCAGAAGCGCCTGGCAGT...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGATGGAAGGCCTCGGCCTaGAGGCGTATCTGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGWKASA*RRICWA Trigger: GGCCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCA...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGGTGGGGTCGCATGGCTaGAGGCTTCGGCGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRVGSHG*RLRRSV Trigger: CACTGAACGCCGAAGCCTGCAGCCATGCGACCCCAC...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGTGGCCAGTCGGCTCCTaGGGAAGGACGTCCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRWPVGS*GRTSFT Trigger: GGTGAAGGACGTCCTTCCCCAGGAGCCGACTGGCCA...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCCGCTTGCTCCACCTTaGCCTGGCATCCTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRPLAPP*PGILPG Trigger: TCCTGGCAGGATGCCAGGCCAAGGTGGAGCAAGCGG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGCGCCCTCAGTTCCTaGGTGACCTGGGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRSALSS*VTWELS Trigger: GCTCAGCTCCCAGGTCACCCAGGAACTGAGGGCGCT...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAAGCTCCTCGGTGCTCTaGCCGAGCATGGCCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGSSSVL*PSMACT Trigger: GGTGCAGGCCATGCTCGGCCAGAGCACCGAGGAGCT...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGTTCAGTGATTGTCGCTaGGCACAGGGGCGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRFSDCR*AQGRRW Trigger: CCAGCGCCGCCCCTGTGCCCAGCGACAATCACTGAA...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR TCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGGCTTCGGCGTTCAGTaGTTGTCGCTGGGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGGFGVQ*LSLGTG Trigger: CCCTGTGCCCAGCGACAATCACTGAACGCCGAAGCC...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACCAAAAGCGACCCAGTaGCAGTTCCCAGCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGPKATQ*QFPALA Trigger: GGCCAGCGCTGGGAACTGGCACTGGGTCGCTTTTGG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGTTCCTGGGTGACCTaGGAGCTGAGCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRSSWVT*ELSSSS Trigger: GGAGGAGCTGCTCAGCTCCCAGGTCACCCAGGAACT...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGTGCAGGCGTATCTGCTaGGCCTGCTCCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRCRRIC*ACSSSL Trigger: CAAGCTGGAGGAGCAGGCCCAGCAGATACGCCTGCA...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR TCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGTCATCTTCCTGCCTGTaGTTGGCCAGTCGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRSSSCL*LASRLL Trigger: CAGGAGCCGACTGGCCAATCACAGGCAGGAAGATGA...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR TCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGATCCTGCCAGGAATGTaGCCAGCAACGCAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRILPGM*PATQPT Trigger: TGTGGGCTGCGTTGCTGGTCACATTCCTGGCAGGAT...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGCTCCTCCTGCACCTaGTCAGACAGTGTCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRSSSCT*SDSVCT Trigger: GGTGCAGACACTGTCTGAGCAGGTGCAGGAGGAGCT...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACTTCCTGCCTGTGATTaGCCAGTCGGCTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGLPACD*PVGSWG Trigger: TCCCCAGGAGCCGACTGGCCAATCACAGGCAGGAAG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGTGCTCCACCTTGGCCTaGCATCCTGCCAGGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRCSTLA*HPARNV Trigger: CACATTCCTGGCAGGATGCCAGGCCAAGGTGGAGCA...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACTGAGCAGCTCCTCCTaGACCTGCTCAGACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGLSSSS*TCSDSV Trigger: GACACTGTCTGAGCAGGTGCAGGAGGAGCTGCTCAG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGCCTTCAACTCCTTCATaGTCTCGTCCATCAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRPSTPS*SRPSAP Trigger: GGGCGCTGATGGACGAGACCATGAAGGAGTTGAAGG...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACTTGGCCTGGCATCCTaGCAGGAATGTGACCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGLGLAS*QECDQQ Trigger: TTGCTGGTCACATTCCTGGCAGGATGCCAGGCCAAG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS CCA 90 bp | CCTGGGCCCGCTCCTGTAGCGGCTGGCCGGCCAGGGAGCCCACAGTaGCGGCCCGCACGCGGCCCTGTTCCACCAGGGGCCCCAGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGPAPVAAGRPGSPQ*RPARGPVPPGAPGA Trigger: AGCGCCTGGGGCCCCTGGTGGAACAGGGCCGCGTGCGGGCCGCCACTGTGGGCTCCCTGGCCGGCCAGCCGCTACAGGAGCGGGCCCAGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252486.9 ENST00000434152.5 |
||
| CDS CCA 90 bp | CTGCCCATCTCCTCCATCCGCGCGCGCAGCCGCTCGCCCCAGGCCTaGGCCCGCTCCTGTAGCGGCTGGCCGGCCAGGGAGCCCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPISSIRARSRSPQA*ARSCSGWPAREPTV Trigger: CACTGTGGGCTCCCTGGCCGGCCAGCCGCTACAGGAGCGGGCCCAGGCCTGGGGCGAGCGGCTGCGCGCGCGGATGGAGGAGATGGGCAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252486.9 ENST00000434152.5 |
||
| CDS-3UTR CAA 90 bp | GAGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGGCCTGCTCCTCCAGCTaGGCGCGCACCTCCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: EDGWGGDRVSRCRLRGGRACSSS*ARTSAT Trigger: GGTGGCGGAGGTGCGCGCCAAGCTGGAGGAGCAGGC...CCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCTC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 90 bp | CCGCCACCTGCTCCTTCACCTCGTCCAGGCGGTCGCGGGTCCGGCTaGCCATCTCCTCCATCCGCGCGCGCAGCCGCTCGCCCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPPAPSPRPGGRGSG*PSPPSARAAARPRP Trigger: AGGCCTGGGGCGAGCGGCTGCGCGCGCGGATGGAGGAGATGGGCAGCCGGACCCGCGACCGCCTGGACGAGGTGAAGGAGCAGGTGGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CAA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGCCGCCTGCAGCTCCTaGGACAGCCGTGCCCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGAACSS*DSRARV Trigger: GACGCGGGCACGGCTGTCCAAGGAGCTGCAGGCGGC...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 90 bp | GCTGAGGCCGCGCTCGGCGCCCTCGCGGGCCCCGGCCTGGTACACTaGCAGGCGCTTCTGCAGGTCATCGGCATCGCGGAGGAGCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AEAALGALAGPGLVH*QALLQVIGIAEEPL Trigger: AAGCGGCTCCTCCGCGATGCCGATGACCTGCAGAAGCGCCTGGCAGTGTACCAGGCCGGGGCCCGCGAGGGCGCCGAGCGCGGCCTCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS CCA 90 bp | GGGAGGCGAGGCGCACCCGCAGCTCCTCGGTGCTCTGGCCGAGCATaGCCTGCACCTCGCCGCGGTACTGCACCAGGCGGCCGCACACGT | + |
|
Preference number: 5 (lower is better) Translates to: GRRGAPAAPRCSGRA*PAPRRGTAPGGRTR Trigger: ACGTGTGCGGCCGCCTGGTGCAGTACCGCGGCGAGGTGCAGGCCATGCTCGGCCAGAGCACCGAGGAGCTGCGGGTGCGCCTCGCCTCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS-3UTR CAA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAAGCCGCTTACGCAGCTaGCGCAGGTGGGAGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGSRLRS*RRWEAR Trigger: CCTCGCCTCCCACCTGCGCAAGCTGCGTAAGCGGCT...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CAA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAGGCTCGAACCAGCTCTaGAGGCGGGCCTGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGGSNQL*RRAWKA Trigger: GGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCC...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 90 bp | TCGGCGCCCTCGCGGGCCCCGGCCTGGTACACTGCCAGGCGCTTCTaGAGGTCATCGGCATCGCGGAGGAGCCGCTTACGCAGCTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAPSRAPAWYTARRF*RSSASRRSRLRSLR Trigger: GCGCAAGCTGCGTAAGCGGCTCCTCCGCGATGCCGATGACCTGCAGAAGCGCCTGGCAGTGTACCAGGCCGGGGCCCGCGAGGGCGCCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS-3UTR CAA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGAACCGCTTGCTCCACCTaGGCCTGGCATCCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGTACST*AWHPAR Trigger: CCTGGCAGGATGCCAGGCCAAGGTGGAGCAAGCGGT...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 90 bp | CGACCCAGTGCCAGTTCCCAGCGCTGGCCGCTCTGCCACTCGGTCTaGTGGCGCAGCTCGGGCTCCGGCTCTGTCTCCACCGCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPSASSQRWPLCHSV*WRSSGSGSVSTACS Trigger: GGAGCAAGCGGTGGAGACAGAGCCGGAGCCCGAGCTGCGCCAGCAGACCGAGTGGCAGAGCGGCCAGCGCTGGGAACTGGCACTGGGTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS GCA 90 bp | ATCTGCTGGGCCTGCTCCTCCAGCTTGGCGCGCACCTCCGCCACCTaGTCCTTCACCTCGTCCAGGCGGTCGCGGGTCCGGCTGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ICWACSSSLARTSAT*SFTSSRRSRVRLPI Trigger: GATGGGCAGCCGGACCCGCGACCGCCTGGACGAGGTGAAGGAGCAGGTGGCGGAGGTGCGCGCCAAGCTGGAGGAGCAGGCCCAGCAGAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 90 bp | CAGCTCTTGAGGCGGGCCTGGAAGGCCTCGGCCTGCAGGCGTATCTaGTGGGCCTGCTCCTCCAGCTTGGCGCGCACCTCCGCCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLRRAWKASACRRI*WACSSSLARTSATC Trigger: GCAGGTGGCGGAGGTGCGCGCCAAGCTGGAGGAGCAGGCCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS CCA 90 bp | CCCAGTGCCAGTTCCCAGCGCTGGCCGCTCTGCCACTCGGTCTGCTaGCGCAGCTCGGGCTCCGGCTCTGTCTCCACCGCTTGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PSASSQRWPLCHSVC*RSSGSGSVSTACST Trigger: GGTGGAGCAAGCGGTGGAGACAGAGCCGGAGCCCGAGCTGCGCCAGCAGACCGAGTGGCAGAGCGGCCAGCGCTGGGAACTGGCACTGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS CCA 90 bp | AGGTCATCGGCATCGCGGAGGAGCCGCTTACGCAGCTTGCGCAGGTaGGAGGCGAGGCGCACCCGCAGCTCCTCGGTGCTCTGGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSASRRSRLRSLRR*EARRTRSSSVLWPS Trigger: GCTCGGCCAGAGCACCGAGGAGCTGCGGGTGCGCCTCGCCTCCCACCTGCGCAAGCTGCGTAAGCGGCTCCTCCGCGATGCCGATGACCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS-3UTR CAA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACTCTGTCTCCACCGCTaGCTCCACCTTGGCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGLCLHR*LHLGLA Trigger: TGCCAGGCCAAGGTGGAGCAAGCGGTGGAGACAGAG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 90 bp | AGGGGCTCGAACCAGCTCTTGAGGCGGGCCTGGAAGGCCTCGGCCTaGAGGCGTATCTGCTGGGCCTGCTCCTCCAGCTTGGCGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGSNQLLRRAWKASA*RRICWACSSSLART Trigger: GGTGCGCGCCAAGCTGGAGGAGCAGGCCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS-3UTR CAA 90 bp | AGGACGGCTGGGGCGGGGACAGGGTCTCCCGCTGCAGGCTGCGCGGAGGCAGGACGCCACCGGGGTCAGTaGTTCCTCCAGTTCCGATTT | + |
|
Preference number: 5 (lower is better) Translates to: RTAGAGTGSPAAGCAEAGRHRGQ*FLQFRF Trigger: AAATCGGAACTGGAGGAACAACTGACCCCGGTGGCG...TCCTGCCTCCGCGCAGCCTGCAGCGGGAGACCCTGTCCCCGCCCCAGCCGTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS TCA 90 bp | CCCACTGGCGCTGCATGTCTTCCACCAGGGGCTCGAACCAGCTCTTaGGGCGGGCCTGGAAGGCCTCGGCCTGCAGGCGTATCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PTGAACLPPGARTSS*GGPGRPRPAGVSAG Trigger: CCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCTGGTGGAAGACATGCAGCGCCAGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS CCA 90 bp | TGCATGTCTTCCACCAGGGGCTCGAACCAGCTCTTGAGGCGGGCCTaGAAGGCCTCGGCCTGCAGGCGTATCTGCTGGGCCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CMSSTRGSNQLLRRA*KASACRRICWACSS Trigger: GGAGGAGCAGGCCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCTGGTGGAAGACATGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 90 bp | AGACAGTGTCTGCACCCAGCGCAGGTAATCCCAAAAGCGACCCAGTaGCAGTTCCCAGCGCTGGCCGCTCTGCCACTCGGTCTGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RQCLHPAQVIPKATQ*QFPALAALPLGLLA Trigger: CGCCAGCAGACCGAGTGGCAGAGCGGCCAGCGCTGGGAACTGGCACTGGGTCGCTTTTGGGATTACCTGCGCTGGGTGCAGACACTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS CCA 90 bp | CGCAGCCCACAGAACCTTCATCTTCCTGCCTGTGATTGGCCAGTCTaGGGAAGGAGAAACTGTCAATCAACCGCCAGTGAGGACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPQNLHLPACDWPV*GRRNCQSTASEDSS Trigger: GGAGGAGTCCTCACTGGCGGTTGATTGACAGTTTCTCCTTCCCCAGACTGGCCAATCACAGGCAGGAAGATGAAGGTTCTGTGGGCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425718.1 |
||
| CDS CCA 72 bp | GCTCCTGTAGCGGCTGGCCGGCCAGGGAGCCCACAGTaGCGGCCCGCACGCGGCCCTGTTCCACCAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: APVAAGRPGSPQ*RPARGPVPPGA Trigger: GGCCCCTGGTGGAACAGGGCCGCGTGCGGGCCGCCACTGTGGGCTCCCTGGCCGGCCAGCCGCTACAGGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252486.9 ENST00000434152.5 |
||
| CDS GCA 72 bp | GCGCTCGGCGCCCTCGCGGGCCCCGGCCTGGTACACTaGCAGGCGCTTCTGCAGGTCATCGGCATCGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALGALAGPGLVH*QALLQVIGIAE Trigger: CTCCGCGATGCCGATGACCTGCAGAAGCGCCTGGCAGTGTACCAGGCCGGGGCCCGCGAGGGCGCCGAGCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS GCA 72 bp | GCTCCTTCACCTCGTCCAGGCGGTCGCGGGTCCGGCTaGCCATCTCCTCCATCCGCGCGCGCAGCCGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: APSPRPGGRGSG*PSPPSARAAAR Trigger: GCGAGCGGCTGCGCGCGCGGATGGAGGAGATGGGCAGCCGGACCCGCGACCGCCTGGACGAGGTGAAGGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS CCA 72 bp | CTGAGGCCGCGCTCGGCGCCCTCGCGGGCCCCGGCCTaGTACACTGCCAGGCGCTTCTGCAGGTCATCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRPRSAPSRAPA*YTARRFCRSSA Trigger: TGCCGATGACCTGCAGAAGCGCCTGGCAGTGTACCAGGCCGGGGCCCGCGAGGGCGCCGAGCGCGGCCTCAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS CCA 72 bp | CGGGCCTGGAAGGCCTCGGCCTGCAGGCGTATCTGCTaGGCCTGCTCCTCCAGCTTGGCGCGCACCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RAWKASACRRIC*ACSSSLARTSA Trigger: GGCGGAGGTGCGCGCCAAGCTGGAGGAGCAGGCCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 72 bp | AAGCGACCCAGTGCCAGTTCCCAGCGCTGGCCGCTCTaGCACTCGGTCTGCTGGCGCAGCTCGGGCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: KRPSASSQRWPL*HSVCWRSSGSG Trigger: GCCGGAGCCCGAGCTGCGCCAGCAGACCGAGTGGCAGAGCGGCCAGCGCTGGGAACTGGCACTGGGTCGCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS GCA 72 bp | CTCTGGCCGAGCATGGCCTGCACCTCGCCGCGGTACTaGACCAGGCGGCCGCACACGTCCTCCATGTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LWPSMACTSPRY*TRRPHTSSMSA Trigger: CGCGGACATGGAGGACGTGTGCGGCCGCCTGGTGCAGTACCGCGGCGAGGTGCAGGCCATGCTCGGCCAGAG 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS GCA 72 bp | AGGCGGGCCTGGAAGGCCTCGGCCTGCAGGCGTATCTaGTGGGCCTGCTCCTCCAGCTTGGCGCGCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRAWKASACRRI*WACSSSLARTS Trigger: GGAGGTGCGCGCCAAGCTGGAGGAGCAGGCCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 72 bp | TCGCGGGCCCCGGCCTGGTACACTGCCAGGCGCTTCTaGAGGTCATCGGCATCGCGGAGGAGCCGCTTACGC | + |
|
Preference number: 6 (lower is better) Translates to: SRAPAWYTARRF*RSSASRRSRLR Trigger: GCGTAAGCGGCTCCTCCGCGATGCCGATGACCTGCAGAAGCGCCTGGCAGTGTACCAGGCCGGGGCCCGCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS CCA 72 bp | TCCACCAGGGGCTCGAACCAGCTCTTGAGGCGGGCCTaGAAGGCCTCGGCCTGCAGGCGTATCTGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: STRGSNQLLRRA*KASACRRICWA Trigger: GGCCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCTGGTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS CAA 90 bp | GCCCACTGGCGCTGCATGTCTTCCACCAGGGGCTCGAACCAGCTCTaGAGGCGGGCCTGGAAGGCCTCGGCCTGCAGGCGTATCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AHWRCMSSTRGSNQL*RRAWKASACRRICW Trigger: CCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCTGGTGGAAGACATGCAGCGCCAGTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS CAA 72 bp | CGCTGCATGTCTTCCACCAGGGGCTCGAACCAGCTCTaGAGGCGGGCCTGGAAGGCCTCGGCCTGCAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RCMSSTRGSNQL*RRAWKASACRR Trigger: ACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCTGGTGGAAGACATGCAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS TCA 72 bp | GCTGCATGTCTTCCACCAGGGGCTCGAACCAGCTCTTaGGGCGGGCCTGGAAGGCCTCGGCCTGCAGGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: AACLPPGARTSS*GGPGRPRPAGV Trigger: TACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCTGGTGGAAGACATGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 72 bp | AACCAGCTCTTGAGGCGGGCCTGGAAGGCCTCGGCCTaGAGGCGTATCTGCTGGGCCTGCTCCTCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NQLLRRAWKASA*RRICWACSSSL Trigger: CAAGCTGGAGGAGCAGGCCCAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCTCAAGAGCTGGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS GCA 72 bp | GCCTGCACCTTCTCCACCAGCCCGGCCCACTGGCGCTaGATGTCTTCCACCAGGGGCTCGAACCAGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ACTFSTSPAHWR*MSSTRGSNQLL Trigger: CAAGAGCTGGTTCGAGCCCCTGGTGGAAGACATGCAGCGCCAGTGGGCCGGGCTGGTGGAGAAGGTGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252486.9 |
||
| CDS CAA 90 bp | CTCGGTCTGCTGGCGCAGCTCGGGCTCCGGCTCTGTCTCCACCGCTaGCTCCACCTTGGCCTGGCATCCTGCCAGGAATGTGACCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LGLLAQLGLRLCLHR*LHLGLASCQECDQQ Trigger: TTGCTGGTCACATTCCTGGCAGGATGCCAGGCCAAGGTGGAGCAAGCGGTGGAGACAGAGCCGGAGCCCGAGCTGCGCCAGCAGACCGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS GCA 72 bp | CTGCACCCAGCGCAGGTAATCCCAAAAGCGACCCAGTaGCAGTTCCCAGCGCTGGCCGCTCTGCCACTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHPAQVIPKATQ*QFPALAALPLG Trigger: ACCGAGTGGCAGAGCGGCCAGCGCTGGGAACTGGCACTGGGTCGCTTTTGGGATTACCTGCGCTGGGTGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS CAA 72 bp | TCGGGCTCCGGCTCTGTCTCCACCGCTTGCTCCACCTaGGCCTGGCATCCTGCCAGGAATGTGACCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SGSGSVSTACST*AWHPARNVTSN Trigger: GTTGCTGGTCACATTCCTGGCAGGATGCCAGGCCAAGGTGGAGCAAGCGGTGGAGACAGAGCCGGAGCCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS CAA 72 bp | CAGCCGTGCCCGCGTCTCCTCCGCCACCGGGGTCAGTaGTTCCTCCAGTTCCGATTTGTAGGCCTTCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: QPCPRLLRHRGQ*FLQFRFVGLQL Trigger: GAGTTGAAGGCCTACAAATCGGAACTGGAGGAACAACTGACCCCGGTGGCGGAGGAGACGCGGGCACGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS CAA 90 bp | CTCCTTGGACAGCCGTGCCCGCGTCTCCTCCGCCACCGGGGTCAGTaGTTCCTCCAGTTCCGATTTGTAGGCCTTCAACTCCTTCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLGQPCPRLLRHRGQ*FLQFRFVGLQLLHG Trigger: ACCATGAAGGAGTTGAAGGCCTACAAATCGGAACTGGAGGAACAACTGACCCCGGTGGCGGAGGAGACGCGGGCACGGCTGTCCAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252486.9 ENST00000425718.1 ENST00000434152.5 ENST00000446996.5 |
||
| CDS GCA 72 bp | TCACAGCTGCCCCGTGTCTGGTATTCACTATCTGCCTaGAATGCATTAGAAACCTCTAACTCCCAGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SQLPRVWYSLSA*NALETSNSQPG Trigger: ACCTGGCTGGGAGTTAGAGGTTTCTAATGCATTGCAGGCAGATAGTGAATACCAGACACGGGGCAGCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485628.2 |
||