Pregenerated sensors for APOD (Homo sapiens)
Ensembl gene IDs: ENSG00000189058Ensembl transcript IDs: ENST00000343267.8, ENST00000421243.5, ENST00000453131.1, ENST00000458447.5, ENST00000463719.1
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCTaGTTACGAGAGCTTGGGGCAGTTCACCTGGTCTGTGACCGTCAT | + |
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Preference number: 1 (lower is better) Translates to: RSRSNMEWVQPPCRT*LRELGAVHLVCDRH Trigger: ATGACGGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CCA 90 bp | CCAGGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTaGGGTGGCTTCACCTTCGATTTGATTCACAGTTCCATCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PGKLNFQLGRLCEVN*GGFTFDLIHSSISS Trigger: AGAGCTGATGGAACTGTGAATCAAATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR TCA 90 bp | TTGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCACCTTCGATTTaGTTCACAGTTCCATCAGCTCTCAACTCCTGGTTTAACACTTTG | + |
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Preference number: 1 (lower is better) Translates to: LAGSVRLTGVASPSI*FTVPSALNSWFNTL Trigger: CAAAGTGTTAAACCAGGAGTTGAGAGCTGATGGAACTGTGAATCAAATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CCA 90 bp | AGCCTCCCTGTAGAACCTGGTTACGAGAGCTTGGGGCAGTTCACCTaGTCTGTGACCGTCATTTTCTTGACATCAATGTTATTAGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: SLPVEPGYESLGQFT*SVTVIFLTSMLLEV Trigger: GACTTCTAATAACATTGATGTCAAGAAAATGACGGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR TCA 90 bp | GGTTTCTTGCCAAGATCCAAGCAAAATCCACGTGAAAAAGTTGGATaGTGCAGGTACAGGAATACACGAGGGCATAGTTCTCATAGTCGG | + |
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Preference number: 1 (lower is better) Translates to: GFLPRSKQNPREKVG*CRYRNTRGHSSHSR Trigger: CCGACTATGAGAACTATGCCCTCGTGTATTCCTGTACCTGCATCATCCAACTTTTTCACGTGGATTTTGCTTGGATCTTGGCAAGAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTGTAGAACCTGGTTACGAGAGCTTGGGGCAGTTCACCTGGTCTGTGACCAGAAGTAACATGGAGTaGGTGCAGCCTCCCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LPVEPGYESLGQFTWSVTRSNME*VQPPCR Trigger: TCTACAGGGAGGCTGCACCCACTCCATGTTACTTCT...GGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CAA 90 bp | ACATGGAGTGGGTGCAGCCTCCCTGTAGAACCTGGTTACGAGAGCTaGGGGCAGTTCACCTGGTCTGTGACCGTCATTTTCTTGACATCA | + |
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Preference number: 2 (lower is better) Translates to: TWSGCSLPVEPGYES*GQFTWSVTVIFLTS Trigger: TGATGTCAAGAAAATGACGGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAGGCTGCACCCACTCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR-3UTR GCA 90 bp | GAACCTGGTTACGAGAGCTTGGGGCAGTTCACCTGGTCTGTGACCGTCATTTTCGTAACATGGAGTGGGTaGAGCCTCCCTGTAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: EPGYESLGQFTWSVTVIFVTWSG*SLPVEP Trigger: AGGTTCTACAGGGAGGCTGCACCCACTCCATGTTAC...GAAAATGACGGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CAA 90 bp | CAGTACGGTGCCGATGGCATAAACCAGGAAAACTTAACTTCCAGCTaGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCACCTTCGATT | + |
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Preference number: 2 (lower is better) Translates to: QYGADGINQENLTSS*AGSVRLTGVASPSI Trigger: AATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATGCCATCGGCACCGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR-3UTR CCA 90 bp | GCGAGCACAGCAGGTCAGCAACAAGTTTATTTTGCAGCTAGCAAGGTAACAGGGAGAAGTAACATGGAGTaGGTGCAGCCTCCCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: ASTAGQQQVYFAASKVTGRSNME*VQPPCR Trigger: TCTACAGGGAGGCTGCACCCACTCCATGTTACTTCT...CCCTGTTACCTTGCTAGCTGCAAAATAAACTTGTTGCTGACCTGCTGTGCTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343267.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTACAGGAATACACGAGGGCATAGTTCTCATAGTCGGTGGCCAGGATCCATTCCTTTGTCGTGGTTaGTTGGTTTGTCTTTATGGG | + |
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Preference number: 2 (lower is better) Translates to: AGTGIHEGIVLIVGGQDPFLCRG*LVCLYG Trigger: CCCATAAAGACAAACCAATCAACCACGACAAAGGAA...TGGATCCTGGCCACCGACTATGAGAACTATGCCCTCGTGTATTCCTGTACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CAA 90 bp | ATTAGGGTTTCTTGCCAAGATCCAAGCAAAATCCACGTGAAAAAGTaGGATGATGCAGGTACAGGAATACACGAGGGCATAGTTCTCATA | + |
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Preference number: 2 (lower is better) Translates to: IRVSCQDPSKIHVKK*DDAGTGIHEGIVLI Trigger: TATGAGAACTATGCCCTCGTGTATTCCTGTACCTGCATCATCCAACTTTTTCACGTGGATTTTGCTTGGATCTTGGCAAGAAACCCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTTTCCTTTGTCGTGGTTaGTTGGTTTGTCTTTATGGG | + |
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Preference number: 2 (lower is better) Translates to: HGYMFRSTSFVVVDWFVFFLCRG*LVCLYG Trigger: CCCATAAAGACAAACCAATCAACCACGACAAAGGAA...AAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTCGTGAAAAAGTTGGATaGTGCAGGTACAGGAATACA | + |
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Preference number: 2 (lower is better) Translates to: HGYMFRSTSFVVVDWFVFREKVG*CRYRNT Trigger: TGTATTCCTGTACCTGCATCATCCAACTTTTTCACG...AAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CCA 72 bp | GGGGGTAGGGGAAAGCGAAGCAGAAGTAACATGGAGTaGGTGCAGCCTCCCTGTAGAACCTGGTTACGAGAG | + |
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Preference number: 3 (lower is better) Translates to: GGRGKRSRSNME*VQPPCRTWLRE Trigger: CTCTCGTAACCAGGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCTACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CCA 72 bp | AGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCTaGTTACGAGAGCTTGGGGCAGTTCACCTGGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SNMEWVQPPCRT*LRELGAVHLVC Trigger: ACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAGGCTGCACCCACTCCATGTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR GCA 72 bp | GTAGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTaGAGCCTCCCTGTAGAACCTGGTTACGAGAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: VGESEAEVTWSG*SLPVEPGYESL Trigger: CAAGCTCTCGTAACCAGGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR-3UTR CAA 90 bp | CGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCTGGTTACGATCAGGTCAACTTCCTTaGTCGTGGTTGATTGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: RSRSNMEWVQPPCRTWLRSGQLP*SWLIGL Trigger: CAAACCAATCAACCACGACAAAGGAAGTTGACCTGA...TCGTAACCAGGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CCA 72 bp | CTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTaGGGTGGCTTCACCTTCGATTTGATTCACAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: LNFQLGRLCEVN*GGFTFDLIHSS Trigger: GGAACTGTGAATCAAATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR GCA 72 bp | ATAGTTCTCATAGTCGGTGGCCAGGATCCAGTACGGTaGCGATGGCATAAACCAGGAAAACTTAACTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: IVLIVGGQDPVR*RWHKPGKLNFQ Trigger: CTGGAAGTTAAGTTTTCCTGGTTTATGCCATCGGCACCGTACTGGATCCTGGCCACCGACTATGAGAACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR TCA 72 bp | TCTGTGAGGTTAACTGGGGTGGCTTCACCTTCGATTTaGTTCACAGTTCCATCAGCTCTCAACTCCTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: SVRLTGVASPSI*FTVPSALNSWF Trigger: AAACCAGGAGTTGAGAGCTGATGGAACTGTGAATCAAATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR TCA 72 bp | CCAAGATCCAAGCAAAATCCACGTGAAAAAGTTGGATaGTGCAGGTACAGGAATACACGAGGGCATAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PRSKQNPREKVG*CRYRNTRGHSS Trigger: AGAACTATGCCCTCGTGTATTCCTGTACCTGCATCATCCAACTTTTTCACGTGGATTTTGCTTGGATCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR GCA 72 bp | AGAGTCCACTGTTTCTGGAGGGAGATTAGGGTTTCTTaGCAAGATCCAAGCAAAATCCACGTGAAAAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: RVHCFWREIRVS*QDPSKIHVKKL Trigger: CAACTTTTTCACGTGGATTTTGCTTGGATCTTGGCAAGAAACCCTAATCTCCCTCCAGAAACAGTGGACTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCAAGATCCAAGCAAAATCCACGTGAAAAAGTTGGATGATGCAGGTACAGGACTTCCTTTGTCGTGGTaGATTGGTTTGTCTTTATGG | + |
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Preference number: 3 (lower is better) Translates to: CQDPSKIHVKKLDDAGTGLPLSW*IGLSLW Trigger: CCATAAAGACAAACCAATCAACCACGACAAAGGAAG...TCCTGTACCTGCATCATCCAACTTTTTCACGTGGATTTTGCTTGGATCTTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR-3UTR CAA 90 bp | GTTCACCTGGTCTGTGACCGTCATTTTCTTGACATCAATGTTATTAGAAGTCAGATCCACGTGAAAAAGTaGGATGATGCAGGTACAGGA | + |
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Preference number: 3 (lower is better) Translates to: VHLVCDRHFLDINVIRSQIHVKK*DDAGTG Trigger: TCCTGTACCTGCATCATCCAACTTTTTCACGTGGAT...CTGACTTCTAATAACATTGATGTCAAGAAAATGACGGTCACAGACCAGGTGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | CTCCCTGTAGAACCTGGTTACGAGAGCTTGGGGCAGTTCACCTGGTCTGTGACCAGGCGGAGGTTGCAGTaGGCCAAGATGGTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPVEPGYESLGQFTWSVTRRRLQ*AKMVML Trigger: CAGCATCACCATCTTGGCTCACTGCAACCTCCGCCT...GGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CAA 72 bp | GGGTGCAGCCTCCCTGTAGAACCTGGTTACGAGAGCTaGGGGCAGTTCACCTGGTCTGTGACCGTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: GCSLPVEPGYES*GQFTWSVTVIF Trigger: GAAAATGACGGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAGGCTGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | ATGGAGTGGGTGCAGCCTCCCTGTAGAACCTGGTTACGAGAGCTTGGGGCAGTTCCCTGGGTGACAAAGTaGGACTCCGTCTTATTCACG | + |
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Preference number: 4 (lower is better) Translates to: MEWVQPPCRTWLRELGAVPWVTK*DSVLFT Trigger: CGTGAATAAGACGGAGTCTCACTTTGTCACCCAGGG...AACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAGGCTGCACCCACTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | GGGGTAGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTACAGGATCCAGTACGGTaGCGATGGCATAAACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GVGESEAEVTWSGCSLPVQDPVR*RWHKPG Trigger: TCCTGGTTTATGCCATCGGCACCGTACTGGATCCTG...TACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCTCACCATCTTGGGGCTaGGTGGCTGGAGAAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: GKLNFQLGRLCEVNWGGFSPSWG*VAGEGT Trigger: GGTCCCTTCTCCAGCCACCCAGCCCCAAGATGGTGA...GAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | CTCCCTGTAGAACCTGGTTACGAGAGCTTGGGGCAGTTCACCTGGTCTGTGACCAGTTCTCATAGTCGGTaGCCAGGATCCAGTACGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPVEPGYESLGQFTWSVTSSHSR*PGSSTV Trigger: CACCGTACTGGATCCTGGCCACCGACTATGAGAACT...GGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | CACGAGGGCATAGTTCTCATAGTCGGTGGCCAGGATCCAGTACGGTGCCGATGGGCTGGAGAAGGGACCTaGAGCTTTTCTTTCAAGATG | + |
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Preference number: 4 (lower is better) Translates to: HEGIVLIVGGQDPVRCRWAGEGT*SFSFKM Trigger: CATCTTGAAAGAAAAGCTCCAGGTCCCTTCTCCAGC...CCATCGGCACCGTACTGGATCCTGGCCACCGACTATGAGAACTATGCCCTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GCAGGTACAGGAATACACGAGGGCATAGTTCTCATAGTCGGTGGCCAGGATCCACCTCCCTGTAGAACCTaGTTACGAGAGCTTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AGTGIHEGIVLIVGGQDPPPCRT*LRELGA Trigger: TGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAGG...TGGATCCTGGCCACCGACTATGAGAACTATGCCCTCGTGTATTCCTGTACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | AGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCAGTAGTTGGCCTGGATaGAGCGTCCATTCTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RGKRSRSNMEWVQPPCRTSSWPG*SVHSQR Trigger: CCTTTGAGAATGGACGCTGCATCCAGGCCAACTACT...GGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | CAAGGTAACAGGGTAGGGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGTCACCATCTTGGGGCTaGGTGGCTGGAGAAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: QGNRVGHGYMFRSTSFVVSPSWG*VAGEGT Trigger: GGTCCCTTCTCCAGCCACCCAGCCCCAAGATGGTGA...CACGACAAAGGAAGTTGACCTGAACATGTAACCATGCCCTACCCTGTTACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCCCTGCACCGGAGGATTaGGGCACTTCCCAAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: GKLNFQLGRLCEVNWGGFPAPED*GTSQDE Trigger: TTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGG...GAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | GGGGTAGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGCTTCACCTTCGATTTaGTTCACAGTTCCATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GVGESEAEVTWSGCSLPVASPSI*FTVPSA Trigger: AGCTGATGGAACTGTGAATCAAATCGAAGGTGAAGC...TACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | GCAGGTACAGGAATACACGAGGGCATAGTTCTCATAGTCGGTGGCCAGGATCCACAGAATCAGCCGATTTaGGATGCCTGTCTTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: AGTGIHEGIVLIVGGQDPQNQPI*DACLGD Trigger: GTCACCAAGACAGGCATCTCAAATCGGCTGATTCTG...TGGATCCTGGCCACCGACTATGAGAACTATGCCCTCGTGTATTCCTGTACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | GGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCACGTCAAAATTCTCCTaGACCGGAGGATTGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GKLNFQLGRLCEVNWGGFTSKFS*TGGLGH Trigger: GTGCCCCAATCCTCCGGTGCAGGAGAATTTTGACGT...GAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | GGTGCCGATGGCATAAACCAGGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGGTAACATGGAGTGGGTaGAGCCTCCCTGTAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: GADGINQENLTSSLAGSVVTWSG*SLPVEP Trigger: AGGTTCTACAGGGAGGCTGCACCCACTCCATGTTAC...CACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATGCCATCGGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | CAAGGTAACAGGGTAGGGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGCAGCATCACCATCTTaGGGCTGGGTGGCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: QGNRVGHGYMFRSTSFVVAASPS*GWVAGE Trigger: TTCTCCAGCCACCCAGCCCCAAGATGGTGATGCTGC...CACGACAAAGGAAGTTGACCTGAACATGTAACCATGCCCTACCCTGTTACCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GCGAGCACAGCAGGTCAGCAACAAGTTTATTTTGCAGCTAGCAAGGTAACAGGGCTGGTTACGAGAGCTTaGGGCAGTTCACCTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: ASTAGQQQVYFAASKVTGLVTRA*GSSPGL Trigger: CAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAG...CCCTGTTACCTTGCTAGCTGCAAAATAAACTTGTTGCTGACCTGCTGTGCTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343267.8 |
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| CDS-3UTR GCA 90 bp | CATAAACCAGGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGAAATGCTTGTCCCTCTaGCGCACCGAAGAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HKPGKLNFQLGRLCEVNWKCLSL*RTEEAS Trigger: GCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTT...CCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | GCGAGCACAGCAGGTCAGCAACAAGTTTATTTTGCAGCTAGCAAGGTAACAGGGCTTCCCAAGATGAAATaGTTGTCCCTCTGCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: ASTAGQQQVYFAASKVTGLPKMK*LSLCRT Trigger: GGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAG...CCCTGTTACCTTGCTAGCTGCAAAATAAACTTGTTGCTGACCTGCTGTGCTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343267.8 |
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| CDS-3UTR GCA 90 bp | GCGAGCACAGCAGGTCAGCAACAAGTTTATTTTGCAGCTAGCAAGGTAACAGGGGTAACATGGAGTGGGTaGAGCCTCCCTGTAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: ASTAGQQQVYFAASKVTGVTWSG*SLPVEP Trigger: AGGTTCTACAGGGAGGCTGCACCCACTCCATGTTAC...CCCTGTTACCTTGCTAGCTGCAAAATAAACTTGTTGCTGACCTGCTGTGCTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343267.8 |
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| CDS-3UTR CCA 90 bp | CAAGGTAACAGGGTAGGGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGCCTGCACCGGAGGATTaGGGCACTTCCCAAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: QGNRVGHGYMFRSTSFVVPAPED*GTSQDE Trigger: TTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGG...CACGACAAAGGAAGTTGACCTGAACATGTAACCATGCCCTACCCTGTTACCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCACCTTCGATTTGATTCACAGTCTCTGTGAGGTTAACTaGGGTGGCTTCACCTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRLCEVNWGGFTFDLIHSLCEVN*GGFTFD Trigger: ATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGAG...ACTGTGAATCAAATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGAGCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | CAAGGTAACAGGGTAGGGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGCCTCCCTGTAGAACCTaGTTACGAGAGCTTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGNRVGHGYMFRSTSFVVPPCRT*LRELGA Trigger: TGCCCCAAGCTCTCGTAACCAGGTTCTACAGGGAGG...CACGACAAAGGAAGTTGACCTGAACATGTAACCATGCCCTACCCTGTTACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| 3UTR CAA 72 bp | GCCGATGGCATAAACCAGGAAAACTTAACTTCCAGCTaGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ADGINQENLTSS*AGSVRLTGVAS Trigger: TGAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATGCCATCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | GGTGCCGATGGCATAAACCAGGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGGCTTCACCTTCGATTTaGTTCACAGTTCCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GADGINQENLTSSLAGSVASPSI*FTVPSA Trigger: AGCTGATGGAACTGTGAATCAAATCGAAGGTGAAGC...CACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATGCCATCGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | CAAGGTAACAGGGTAGGGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGCCATTAGTGAGTAGTTaGCCTGGATGCAGCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGNRVGHGYMFRSTSFVVPLVSS*PGCSVH Trigger: ATGGACGCTGCATCCAGGCCAACTACTCACTAATGG...CACGACAAAGGAAGTTGACCTGAACATGTAACCATGCCCTACCCTGTTACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GCGAGCACAGCAGGTCAGCAACAAGTTTATTTTGCAGCTAGCAAGGTAACAGGGCCAGTACGGTGCCGATaGCATAAACCAGGAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: ASTAGQQQVYFAASKVTGPVRCR*HKPGKL Trigger: AAGTTTTCCTGGTTTATGCCATCGGCACCGTACTGG...CCCTGTTACCTTGCTAGCTGCAAAATAAACTTGTTGCTGACCTGCTGTGCTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343267.8 |
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| CDS-3UTR CCA 90 bp | GGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCAGAGTCCACTGTTTCTaGAGGGAGATTAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKLNFQLGRLCEVNWGGFRVHCF*REIRVS Trigger: AGAAACCCTAATCTCCCTCCAGAAACAGTGGACTCT...GAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | TGCCAAGATCCAAGCAAAATCCACGTGAAAAAGTTGGATGATGCAGGTACAGGACTGGTTACGAGAGCTTaGGGCAGTTCACCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CQDPSKIHVKKLDDAGTGLVTRA*GSSPGL Trigger: CAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAG...TCCTGTACCTGCATCATCCAACTTTTTCACGTGGATTTTGCTTGGATCTTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCACCTTCGATTTGATTCACAGTTTCCTTTGTCGTGGTTaGTTGGTTTGTCTTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLCEVNWGGFTFDLIHSFLCRG*LVCLYG Trigger: CCCATAAAGACAAACCAATCAACCACGACAAAGGAA...ACTGTGAATCAAATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGAGCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
||
| CDS-3UTR GCA 90 bp | CATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTAAATGCTTGTCCCTCTaGCGCACCGAAGAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGYMFRSTSFVVVDWFVFKCLSL*RTEEAS Trigger: GCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTT...AAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | GGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTACGTCAAAATTCTCCTaGACCGGAGGATTGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GMVTCSGQLPLSWLIGLSTSKFS*TGGLGH Trigger: GTGCCCCAATCCTCCGGTGCAGGAGAATTTTGACGT...AGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | CATAAACCAGGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGAGTAGTTGGCCTGGATaGAGCGTCCATTCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKPGKLNFQLGRLCEVNWSSWPG*SVHSQR Trigger: CCTTTGAGAATGGACGCTGCATCCAGGCCAACTACT...CCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTAGTTCTCATAGTCGGTaGCCAGGATCCAGTACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GMVTCSGQLPLSWLIGLSSSHSR*PGSSTV Trigger: CACCGTACTGGATCCTGGCCACCGACTATGAGAACT...AGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
||
| CDS-3UTR CCA 90 bp | GCGAGCACAGCAGGTCAGCAACAAGTTTATTTTGCAGCTAGCAAGGTAACAGGGAGAGTCCACTGTTTCTaGAGGGAGATTAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTAGQQQVYFAASKVTGRVHCF*REIRVS Trigger: AGAAACCCTAATCTCCCTCCAGAAACAGTGGACTCT...CCCTGTTACCTTGCTAGCTGCAAAATAAACTTGTTGCTGACCTGCTGTGCTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343267.8 |
||
| CDS-3UTR TCA 90 bp | CGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCTGGTTACGACCTGGTTTAACACTTTaGTCTTTCCGTTTTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RSRSNMEWVQPPCRTWLRPGLTL*SFRFPL Trigger: TAATGGAAAACGGAAAGATCAAAGTGTTAAACCAGG...TCGTAACCAGGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | CAAGGTAACAGGGTAGGGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGAAGGCAGTTTCCAGATaGAGAATCAGCCGATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGNRVGHGYMFRSTSFVVKAVSR*RISRFE Trigger: CTCAAATCGGCTGATTCTGCATCTGGAAACTGCCTT...CACGACAAAGGAAGTTGACCTGAACATGTAACCATGCCCTACCCTGTTACCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | ACAGTTCCATCAGCTCTCAACTCCTGGTTTAACACTTTGATCTTTCCGTTTTCCCAGGATCCAGTACGGTaGCGATGGCATAAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVPSALNSWFNTLIFPFSQDPVR*RWHKPG Trigger: TCCTGGTTTATGCCATCGGCACCGTACTGGATCCTG...GGAAAACGGAAAGATCAAAGTGTTAAACCAGGAGTTGAGAGCTGATGGAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | AGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCATTCTCAAAGGTTGTTaGGATCTTCTCAATTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGKRSRSNMEWVQPPCRTILKGC*DLLNFV Trigger: TACGAAATTGAGAAGATCCCAACAACCTTTGAGAAT...GGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTCTCTGTGAGGTTAACTaGGGTGGCTTCACCTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GMVTCSGQLPLSWLIGLSLCEVN*GGFTFD Trigger: ATCGAAGGTGAAGCCACCCCAGTTAACCTCACAGAG...AGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | ACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTATGGGGGAGAAGTAACATGGAGTaGGTGCAGCCTCCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCSGQLPLSWLIGLSLWGRSNME*VQPPCR Trigger: TCTACAGGGAGGCTGCACCCACTCCATGTTACTTCT...CCCCCATAAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTGCTGGAGAAGGGACCTaGAGCTTTTCTTTCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GMVTCSGQLPLSWLIGLSAGEGT*SFSFKM Trigger: CATCTTGAAAGAAAAGCTCCAGGTCCCTTCTCCAGC...AGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTCCAGTACGGTGCCGATaGCATAAACCAGGAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GMVTCSGQLPLSWLIGLSPVRCR*HKPGKL Trigger: AAGTTTTCCTGGTTTATGCCATCGGCACCGTACTGG...AGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | ACAGTTCCATCAGCTCTCAACTCCTGGTTTAACACTTTGATCTTTCCGTTTTCCAGAAGTAACATGGAGTaGGTGCAGCCTCCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVPSALNSWFNTLIFPFSRSNME*VQPPCR Trigger: TCTACAGGGAGGCTGCACCCACTCCATGTTACTTCT...GGAAAACGGAAAGATCAAAGTGTTAAACCAGGAGTTGAGAGCTGATGGAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR GCA 90 bp | ACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTATGGGGGAAGGCAGTTTCCAGATaGAGAATCAGCCGATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCSGQLPLSWLIGLSLWGKAVSR*RISRFE Trigger: CTCAAATCGGCTGATTCTGCATCTGGAAACTGCCTT...CCCCCATAAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GTTCACCTGGTCTGTGACCGTCATTTTCTTGACATCAATGTTATTAGAAGTCAGCCATTAGTGAGTAGTTaGCCTGGATGCAGCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHLVCDRHFLDINVIRSQPLVSS*PGCSVH Trigger: ATGGACGCTGCATCCAGGCCAACTACTCACTAATGG...CTGACTTCTAATAACATTGATGTCAAGAAAATGACGGTCACAGACCAGGTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| 3UTR CAA 72 bp | TCTTGCCAAGATCCAAGCAAAATCCACGTGAAAAAGTaGGATGATGCAGGTACAGGAATACACGAGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SCQDPSKIHVKK*DDAGTGIHEGI Trigger: TATGCCCTCGTGTATTCCTGTACCTGCATCATCCAACTTTTTCACGTGGATTTTGCTTGGATCTTGGCAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | CAAGGTAACAGGGTAGGGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGCCTGGTTTAACACTTTaGTCTTTCCGTTTTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: QGNRVGHGYMFRSTSFVVPGLTL*SFRFPL Trigger: TAATGGAAAACGGAAAGATCAAAGTGTTAAACCAGG...CACGACAAAGGAAGTTGACCTGAACATGTAACCATGCCCTACCCTGTTACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | ACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTATGGGGGCGTGAAAAAGTTGGATaGTGCAGGTACAGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: TCSGQLPLSWLIGLSLWGREKVG*CRYRNT Trigger: TGTATTCCTGTACCTGCATCATCCAACTTTTTCACG...CCCCCATAAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR TCA 90 bp | ACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTATGGGGGTTCCTTTGTCGTGGTTaGTTGGTTTGTCTTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCSGQLPLSWLIGLSLWGFLCRG*LVCLYG Trigger: CCCATAAAGACAAACCAATCAACCACGACAAAGGAA...CCCCCATAAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | CATAAACCAGGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGATTCTCAAAGGTTGTTaGGATCTTCTCAATTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: HKPGKLNFQLGRLCEVNWILKGC*DLLNFV Trigger: TACGAAATTGAGAAGATCCCAACAACCTTTGAGAAT...CCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CCA 90 bp | GGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTCAACTTCCTTTGTCGTaGTTGATTGGTTTGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GMVTCSGQLPLSWLIGLSQLPLS*LIGLSL Trigger: TAAAGACAAACCAATCAACCACGACAAAGGAAGTTG...AGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS GCA 90 bp | CACCGGAGGATTGGGGCACTTCCCAAGATGAAATGCTTGTCCCTCTaGCGCACCGAAGAGGCCAGCCAGTGCGGAAAGCAGCAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRRIGALPKMKCLSL*RTEEASQCGKQQQQ Trigger: CTGCTGCTGCTGCTTTCCGCACTGGCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS GCA 90 bp | AAGATGAAATGCTTGTCCCTCTGCCGCACCGAAGAGGCCAGCCAGTaGGGAAAGCAGCAGCAGCAGCATCACCATCTTGGGGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KMKCLSLCRTEEASQ*GKQQQQHHHLGAGW Trigger: CCACCCAGCCCCAAGATGGTGATGCTGCTGCTGCTGCTTTCCGCACTGGCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTTCATCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS TCA 90 bp | ACGTCAAAATTCTCCTGCACCGGAGGATTGGGGCACTTCCCAAGATaGAATGCTTGTCCCTCTGCCGCACCGAAGAGGCCAGCCAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TSKFSCTGGLGHFPR*NACPSAAPKRPASA Trigger: CGCACTGGCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAATTTTGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS-3UTR CAA 90 bp | AGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCAGCAGCATCACCATCTaGGGGCTGGGTGGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGKRSRSNMEWVQPPCRTSSITI*GLGGWR Trigger: TCTCCAGCCACCCAGCCCCAAGATGGTGATGCTGCT...GGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS GCA 90 bp | AAAATTCTCCTGCACCGGAGGATTGGGGCACTTCCCAAGATGAAATaGTTGTCCCTCTGCCGCACCGAAGAGGCCAGCCAGTGCGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KILLHRRIGALPKMK*LSLCRTEEASQCGK Trigger: CTTTCCGCACTGGCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS-3UTR CAA 90 bp | AGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCCCTGGTTACGAGAGCTaGGGGCAGTTCACCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGKRSRSNMEWVQPPCRTPGYES*GQFTWS Trigger: AGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGG...GGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CAA 90 bp | GGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCAGCAGCATCACCATCTaGGGGCTGGGTGGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GKLNFQLGRLCEVNWGGFSSITI*GLGGWR Trigger: TCTCCAGCCACCCAGCCCCAAGATGGTGATGCTGCT...GAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS TCA 90 bp | TATGCGCTCAGTCTCCACAGCACCTCCTCTGGAGGCGACCTCTGCTaGCACTCTCTTCATACCAACGAGGTGAATTTGCCCGGGTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: YALSLHSTSSGGDLC*HSLHTNEVNLPGLL Trigger: AAGTAACCCGGGCAAATTCACCTCGTTGGTATGAAGAGAGTGTCAGCAGAGGTCGCCTCCAGAGGAGGTGCTGTGGAGACTGAGCGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453131.1 |
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| CDS CCA 90 bp | GAGACTCCGTCTTATTCACGTCAAAATTCTCCTGCACCGGAGGATTaGGGCACTTCCCAAGATGAAATGCTTGTCCCTCTGCCGCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: ETPSYSRQNSPAPED*GTSQDEMLVPLPHR Trigger: TCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAATTTTGACGTGAATAAGACGGAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS CCA 90 bp | AGGATTTTAAGGGTGCTATGCGCTCAGTCTCCACAGCACCTCCTCTaGAGGCGACCTCTGCTGACACTCTCTTCATACCAACGAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RILRVLCAQSPQHLL*RRPLLTLSSYQRGE Trigger: TTCACCTCGTTGGTATGAAGAGAGTGTCAGCAGAGGTCGCCTCCAGAGGAGGTGCTGTGGAGACTGAGCGCATAGCACCCTTAAAATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453131.1 |
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| CDS-3UTR CAA 90 bp | GGGGTAGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGGCTTCACCTTCGATTaGATTCACAGTTCCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVGESEAEVTWSGCSLPVGFTFD*IHSSIS Trigger: GCTGATGGAACTGTGAATCAAATCGAAGGTGAAGCC...TACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
||
| CDS CCA 90 bp | TATCTGCTAATGTTTCGGGCCCCAGTTTCCTTTGGGAAACAAGACTaGGTTGTGTCTTCTGCAGCCCACACCCGGTGTGCACCTACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YLLMFRAPVSFGKQD*VVSSAAHTRCAPTC Trigger: ACAAGTAGGTGCACACCGGGTGTGGGCTGCAGAAGACACAACCCAGTCTTGTTTCCCAAAGGAAACTGGGGCCCGAAACATTAGCAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
||
| CDS-3UTR CAA 90 bp | GGGGTAGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAATCCACGTGAAAAAGTaGGATGATGCAGGTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVGESEAEVTWSGCSLPVIHVKK*DDAGTG Trigger: TCCTGTACCTGCATCATCCAACTTTTTCACGTGGAT...TACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCTACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
||
| CDS CCA 90 bp | TTCCGAGATACTTATTCACGTCAAAATTCTCCTGCACCGGAGGATTaGGGCACTTCCCAAGATGAAATGCTTGTCCCTCTGCCGCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: FRDTYSRQNSPAPED*GTSQDEMLVPLPHR Trigger: TCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAATTTTGACGTGAATAAGTATCTCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000463719.1 |
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| CDS CCA 90 bp | GTTGTTCTGCTAATATCTGCTAATGTTTCGGGCCCCAGTTTCCTTTaGGAAACAAGACTGGGTTGTGTCTTCTGCAGCCCACACCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVLLISANVSGPSFL*ETRLGCVFCSPHPV Trigger: CACCGGGTGTGGGCTGCAGAAGACACAACCCAGTCTTGTTTCCCAAAGGAAACTGGGGCCCGAAACATTAGCAGATATTAGCAGAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS-3UTR CAA 90 bp | CATAAACCAGGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGCCTGGTTACGAGAGCTaGGGGCAGTTCACCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKPGKLNFQLGRLCEVNWPGYES*GQFTWS Trigger: AGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGG...CCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CAA 90 bp | AGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCTCAGGTCAACTTCCTTaGTCGTGGTTGATTGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGKRSRSNMEWVQPPCRTSGQLP*SWLIGL Trigger: CAAACCAATCAACCACGACAAAGGAAGTTGACCTGA...GGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS GCA 90 bp | GAAGGGACCTGGAGCTTTTCTTTCAAGATGAAGGCAGTTTCCAGATaGAGAATCAGCCGATTTGAGATGCCTGTCTTGGTGACTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EGTWSFSFKMKAVSR*RISRFEMPVLVTGL Trigger: GAGGCCAGTCACCAAGACAGGCATCTCAAATCGGCTGATTCTGCATCTGGAAACTGCCTTCATCTTGAAAGAAAAGCTCCAGGTCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000458447.5 ENST00000463719.1 |
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| CDS-3UTR CAA 90 bp | GGGGTAGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTACATTCTCAAAGGTTGTaGGGATCTTCTCAATTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GVGESEAEVTWSGCSLPVHSQRL*GSSQFR Trigger: ACGAAATTGAGAAGATCCCAACAACCTTTGAGAATG...TACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCTACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CAA 90 bp | AGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCCTTCCTTTGTCGTGGTaGATTGGTTTGTCTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: RGKRSRSNMEWVQPPCRTLPLSW*IGLSLW Trigger: CCATAAAGACAAACCAATCAACCACGACAAAGGAAG...GGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CAA 90 bp | GAACCTGGTTACGAGAGCTTGGGGCAGTTCACCTGGTCTGTGACCGTCATTTTCTCAGGTCAACTTCCTTaGTCGTGGTTGATTGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPGYESLGQFTWSVTVIFSGQLP*SWLIGL Trigger: CAAACCAATCAACCACGACAAAGGAAGTTGACCTGA...GAAAATGACGGTCACAGACCAGGTGAACTGCCCCAAGCTCTCGTAACCAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS TCA 90 bp | CCTCTGGAGGCGACCTCTGCTGACACTCTCTTCATACCAACGAGGTaGATTTGCCCGGGTTACTTCCTGGTAAACTTTTCTTTCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLEATSADTLFIPTR*ICPGYFLVNFSFKM Trigger: CATCTTGAAAGAAAAGTTTACCAGGAAGTAACCCGGGCAAATTCACCTCGTTGGTATGAAGAGAGTGTCAGCAGAGGTCGCCTCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453131.1 |
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| CDS-3UTR CAA 90 bp | GCGAGCACAGCAGGTCAGCAACAAGTTTATTTTGCAGCTAGCAAGGTAACAGGGAACTTAACTTCCAGCTaGGCAGGCTCTGTGAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASTAGQQQVYFAASKVTGNLTSS*AGSVRL Trigger: TAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTT...CCCTGTTACCTTGCTAGCTGCAAAATAAACTTGTTGCTGACCTGCTGTGCTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343267.8 |
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| CDS-3UTR CAA 90 bp | AGGGGAAAGCGAAGCAGAAGTAACATGGAGTGGGTGCAGCCTCCCTGTAGAACCTCCTGGTTTAACACTTaGATCTTTCCGTTTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RGKRSRSNMEWVQPPCRTSWFNT*IFPFSI Trigger: AATGGAAAACGGAAAGATCAAAGTGTTAAACCAGGA...GGTTCTACAGGGAGGCTGCACCCACTCCATGTTACTTCTGCTTCGCTTTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CAA 90 bp | GGAAAACTTAACTTCCAGCTTGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCCTTCCTTTGTCGTGGTaGATTGGTTTGTCTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: GKLNFQLGRLCEVNWGGFLPLSW*IGLSLW Trigger: CCATAAAGACAAACCAATCAACCACGACAAAGGAAG...GAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS CCA 90 bp | CCTTCAGTTTGCATATTTCCTGTCCCTGAATCCTCCTGGGAAAAGTaGATACTTACACCAGGAAAACTTAACTTCCAGCTTGGCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSVCIFPVPESSWEK*ILTPGKLNFQLGRL Trigger: GAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTGTAAGTATCCACTTTTCCCAGGAGGATTCAGGGACAGGAAATATGCAAACTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS TCA 90 bp | TGTAGTAAGTGTTTGACAGATAATTATGTGCTGAGTGATTATAGATaGCACTCAGGTGTCTCAGGAATTCTCCAAGCCGGGGCGCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSKCLTDNYVLSDYR*HSGVSGILQAGALA Trigger: GGCTAGCGCCCCGGCTTGGAGAATTCCTGAGACACCTGAGTGTCATCTATAATCACTCAGCACATAATTATCTGTCAAACACTTACTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS TCA 90 bp | TTCTTTCAAGATGAAGGCAGTTTCCAGATGCAGAATCAGCCGATTTaGGATGCCTGTCTTGGTGACTGGCCTCTCCCAAGCTATTTTATA | + |
|
Preference number: 5 (lower is better) Translates to: FFQDEGSFQMQNQPI*DACLGDWPLPSYFI Trigger: TATAAAATAGCTTGGGAGAGGCCAGTCACCAAGACAGGCATCTCAAATCGGCTGATTCTGCATCTGGAAACTGCCTTCATCTTGAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
||
| CDS-3UTR CAA 90 bp | CAAGGTAACAGGGTAGGGCATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGCATTCTCAAAGGTTGTaGGGATCTTCTCAATTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QGNRVGHGYMFRSTSFVVHSQRL*GSSQFR Trigger: ACGAAATTGAGAAGATCCCAACAACCTTTGAGAATG...CACGACAAAGGAAGTTGACCTGAACATGTAACCATGCCCTACCCTGTTACCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CAA 90 bp | ACAGTTCCATCAGCTCTCAACTCCTGGTTTAACACTTTGATCTTTCCGTTTTCCAACTTAACTTCCAGCTaGGCAGGCTCTGTGAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TVPSALNSWFNTLIFPFSNLTSS*AGSVRL Trigger: TAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTT...GGAAAACGGAAAGATCAAAGTGTTAAACCAGGAGTTGAGAGCTGATGGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS-3UTR CAA 90 bp | ACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTATGGGGGATCCACGTGAAAAAGTaGGATGATGCAGGTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TCSGQLPLSWLIGLSLWGIHVKK*DDAGTG Trigger: TCCTGTACCTGCATCATCCAACTTTTTCACGTGGAT...CCCCCATAAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS-3UTR CAA 90 bp | CATGGTTACATGTTCAGGTCAACTTCCTTTGTCGTGGTTGATTGGTTTGTCTTTGGCTTCACCTTCGATTaGATTCACAGTTCCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HGYMFRSTSFVVVDWFVFGFTFD*IHSSIS Trigger: GCTGATGGAACTGTGAATCAAATCGAAGGTGAAGCC...AAAGACAAACCAATCAACCACGACAAAGGAAGTTGACCTGAACATGTAACCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343267.8 ENST00000458447.5 |
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| CDS GCA 72 bp | CTGCACCGGAGGATTGGGGCACTTCCCAAGATGAAATaGTTGTCCCTCTGCCGCACCGAAGAGGCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHRRIGALPKMK*LSLCRTEEASQ Trigger: CTGGCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS CCA 72 bp | TGGCTGGAGAAGGGACCTGGAGCCGTGGAGAAGCCCTaGTCCCAGGATTTTAAGGGTGCTATGCGCTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: WLEKGPGAVEKP*SQDFKGAMRSV Trigger: GACTGAGCGCATAGCACCCTTAAAATCCTGGGACCAGGGCTTCTCCACGGCTCCAGGTCCCTTCTCCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453131.1 |
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| CDS CAA 90 bp | ATTCTCCTGCACCGGAGGATTGGGGCACTTCCCAAGATGAAATGCTaGTCCCTCTGCCGCACCGAAGAGGCCAGCCAGTGCGGAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ILLHRRIGALPKMKC*SLCRTEEASQCGKQ Trigger: CTGCTTTCCGCACTGGCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS TCA 72 bp | TTCTCCTGCACCGGAGGATTGGGGCACTTCCCAAGATaGAATGCTTGTCCCTCTGCCGCACCGAAGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSCTGGLGHFPR*NACPSAAPKRP Trigger: TGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS GCA 72 bp | ATTGGGGCACTTCCCAAGATGAAATGCTTGTCCCTCTaGCGCACCGAAGAGGCCAGCCAGTGCGGAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IGALPKMKCLSL*RTEEASQCGKQ Trigger: CTGCTTTCCGCACTGGCTGGCCTCTTCGGTGCGGCAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS CAA 72 bp | TTCGGGCCCCAGTTTCCTTTGGGAAACAAGACTGGGTaGTGTCTTCTGCAGCCCACACCCGGTGTGCACCTA | + |
|
Preference number: 6 (lower is better) Translates to: FGPQFPLGNKTG*CLLQPTPGVHL Trigger: TAGGTGCACACCGGGTGTGGGCTGCAGAAGACACAACCCAGTCTTGTTTCCCAAAGGAAACTGGGGCCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS CCA 72 bp | ATGTTTCGGGCCCCAGTTTCCTTTGGGAAACAAGACTaGGTTGTGTCTTCTGCAGCCCACACCCGGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MFRAPVSFGKQD*VVSSAAHTRCA Trigger: TGCACACCGGGTGTGGGCTGCAGAAGACACAACCCAGTCTTGTTTCCCAAAGGAAACTGGGGCCCGAAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS TCA 72 bp | GATGAAGGCAGTTTCCAGATGCAGAATCAGCCGATTTaGGATGCCTGTCTTGGTGACTGGCCTCTCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: DEGSFQMQNQPI*DACLGDWPLPS Trigger: GCTTGGGAGAGGCCAGTCACCAAGACAGGCATCTCAAATCGGCTGATTCTGCATCTGGAAACTGCCTTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS TCA 72 bp | GGGGCGCTAGCCTTCAGTTTGCATATTTCCTGTCCCTaGATCCTCCTGGGAAAAGTGGATACTTACACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GALAFSLHISCP*ILLGKVDTYTR Trigger: CCTGGTGTAAGTATCCACTTTTCCCAGGAGGATTCAGGGACAGGAAATATGCAAACTGAAGGCTAGCGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS GCA 72 bp | GCAGGATTCAAACTTGCCGTCACTCTTGTCATCTCTTaGTTCCTAGTTTCTGCGCCGTGCAGGTTGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGFKLAVTLVIS*FLVSAPCRLFC Trigger: GCAGAACAACCTGCACGGCGCAGAAACTAGGAAGCAAGAGATGACAAGAGTGACGGCAAGTTTGAATCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS TCA 72 bp | GCGACCTCTGCTGACACTCTCTTCATACCAACGAGGTaGATTTGCCCGGGTTACTTCCTGGTAAACTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATSADTLFIPTR*ICPGYFLVNFS Trigger: AGAAAAGTTTACCAGGAAGTAACCCGGGCAAATTCACCTCGTTGGTATGAAGAGAGTGTCAGCAGAGGTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453131.1 |
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| CDS CCA 72 bp | ACTTATTCACGTCAAAATTCTCCTGCACCGGAGGATTaGGGCACTTCCCAAGATGAAATGCTTGTCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TYSRQNSPAPED*GTSQDEMLVPL Trigger: CAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAATTTTGACGTGAATAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000463719.1 |
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| CDS CCA 72 bp | TCTTATTCACGTCAAAATTCTCCTGCACCGGAGGATTaGGGCACTTCCCAAGATGAAATGCTTGTCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SYSRQNSPAPED*GTSQDEMLVPL Trigger: CAGAGGGACAAGCATTTCATCTTGGGAAGTGCCCCAATCCTCCGGTGCAGGAGAATTTTGACGTGAATAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS CCA 72 bp | CTAATATCTGCTAATGTTTCGGGCCCCAGTTTCCTTTaGGAAACAAGACTGGGTTGTGTCTTCTGCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LISANVSGPSFL*ETRLGCVFCSP Trigger: TGGGCTGCAGAAGACACAACCCAGTCTTGTTTCCCAAAGGAAACTGGGGCCCGAAACATTAGCAGATATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS CAA 72 bp | AGTGGATACTTACACCAGGAAAACTTAACTTCCAGCTaGGCAGGCTCTGTGAGGTTAACTGGGGTGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGYLHQENLTSS*AGSVRLTGVAS Trigger: TGAAGCCACCCCAGTTAACCTCACAGAGCCTGCCAAGCTGGAAGTTAAGTTTTCCTGGTGTAAGTATCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS CAA 90 bp | AGTGGCAGAAGCAGGATTCAAACTTGCCGTCACTCTTGTCATCTCTaGCTTCCTAGTTTCTGCGCCGTGCAGGTTGTTCTGCTAATATCT | + |
|
Preference number: 6 (lower is better) Translates to: SGRSRIQTCRHSCHL*LPSFCAVQVVLLIS Trigger: AGATATTAGCAGAACAACCTGCACGGCGCAGAAACTAGGAAGCAAGAGATGACAAGAGTGACGGCAAGTTTGAATCCTGCTTCTGCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS CAA 90 bp | CCTACTTGTGTTTCACCTGTTGAAACGCTAGCTAGTTATAGTAAATaGCGGGGTCACGTGTCAGTATCCACACTGGGATGTGAGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PTCVSPVETLASYSK*RGHVSVSTLGCELH Trigger: ATGGAGCTCACATCCCAGTGTGGATACTGACACGTGACCCCGCAATTTACTATAACTAGCTAGCGTTTCAACAGGTGAAACACAAGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS CAA 72 bp | AGTTGGCCTGGATGCAGCGTCCATTCTCAAAGGTTGTaGGGATCTTCTCAATTTCGTACCATCTTCCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SWPGCSVHSQRL*GSSQFRTIFRD Trigger: ATCTCGGAAGATGGTACGAAATTGAGAAGATCCCAACAACCTTTGAGAATGGACGCTGCATCCAGGCCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS CAA 90 bp | TTAGTGAGTAGTTGGCCTGGATGCAGCGTCCATTCTCAAAGGTTGTaGGGATCTTCTCAATTTCGTACCATCTTCCGAGATACTGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LVSSWPGCSVHSQRL*GSSQFRTIFRDTVV Trigger: GACTACAGTATCTCGGAAGATGGTACGAAATTGAGAAGATCCCAACAACCTTTGAGAATGGACGCTGCATCCAGGCCAACTACTCACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458447.5 |
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| CDS TCA 72 bp | GATGCAGAATCAGCCGATTTGAGATGCCTGTCTTGGTaGCTGGCCTCTCCCAAGCTATTTTATAAGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DAESADLRCLSW*LASPKLFYKLL Trigger: AAGAAGCTTATAAAATAGCTTGGGAGAGGCCAGTCACCAAGACAGGCATCTCAAATCGGCTGATTCTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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| CDS GCA 72 bp | TCTTTCCGTTTTCCATTAGTGAGTAGTTGGCCTGGATaGAGCGTCCATTCTCAAAGGTTGTTGGGATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFRFPLVSSWPG*SVHSQRLLGSS Trigger: AGAAGATCCCAACAACCTTTGAGAATGGACGCTGCATCCAGGCCAACTACTCACTAATGGAAAACGGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS GCA 72 bp | TGGAGCTTTTCTTTCAAGATGAAGGCAGTTTCCAGATaGAGAATCAGCCGATTTGAGATGCCTGTCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WSFSFKMKAVSR*RISRFEMPVLV Trigger: CACCAAGACAGGCATCTCAAATCGGCTGATTCTGCATCTGGAAACTGCCTTCATCTTGAAAGAAAAGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000458447.5 ENST00000463719.1 |
||
| CDS CAA 72 bp | GTTTCACCTGTTGAAACGCTAGCTAGTTATAGTAAATaGCGGGGTCACGTGTCAGTATCCACACTGGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: VSPVETLASYSK*RGHVSVSTLGC Trigger: ACATCCCAGTGTGGATACTGACACGTGACCCCGCAATTTACTATAACTAGCTAGCGTTTCAACAGGTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463719.1 |
||
| CDS CAA 90 bp | TTAGTGAGTAGTTGGCCTGGATGCAGCGTCCATTCTCAAAGGTTGTaGGGATCTTCTCAATTTCGTACCATCTTCCGAGATACTTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: LVSSWPGCSVHSQRL*GSSQFRTIFRDTYS Trigger: TGAATAAGTATCTCGGAAGATGGTACGAAATTGAGAAGATCCCAACAACCTTTGAGAATGGACGCTGCATCCAGGCCAACTACTCACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000463719.1 |
||
| CDS TCA 72 bp | CAGTTCCATCAGCTCTCAACTCCTGGTTTAACACTTTaGTCTTTCCGTTTTCCATTAGTGAGTAGTTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QFHQLSTPGLTL*SFRFPLVSSWP Trigger: AGGCCAACTACTCACTAATGGAAAACGGAAAGATCAAAGTGTTAAACCAGGAGTTGAGAGCTGATGGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000343267.8 ENST00000421243.5 ENST00000453131.1 ENST00000458447.5 ENST00000463719.1 |
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| CDS CCA 72 bp | TGCATATTTCCTGTCCCTGAATCCTCCTGGGAAAAGTaGATACTTACACCAGGAAAACTTAACTTCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CIFPVPESSWEK*ILTPGKLNFQL Trigger: AAGCTGGAAGTTAAGTTTTCCTGGTGTAAGTATCCACTTTTCCCAGGAGGATTCAGGGACAGGAAATATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463719.1 |
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