Pregenerated sensors for APOC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000267467

Ensembl transcript IDs: ENST00000591600.1, ENST00000592954.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGCCCCGGAAGGTGCTCGGGCTCCAGAACCATTGCCACCCGTCTCTaGTCCTGTTCACCACTGTCTCCAGCAGCTCCTTCATCCTGCCCC	+
Preference number: 5 (lower is better) Translates to: SPGRCSGSRTIATRL*SCSPLSPAAPSSCP Trigger: GGGGCAGGATGAAGGAGCTGCTGGAGACAGTGGTGAACAGGACCAGAGACGGGTGGCAATGGTTCTGGAGCCCGAGCACCTTCCGGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592954.2
CDS CCA 90 bp	CACCCAGCCCAGCACACCCTCACCAGAACCATTGCCACCCGTCTCTaGTCCTGTTCACCACTGTCTCCAGCAGCTCCTTCATCCTGCCCC	+
Preference number: 5 (lower is better) Translates to: HPAQHTLTRTIATRL*SCSPLSPAAPSSCP Trigger: GGGGCAGGATGAAGGAGCTGCTGGAGACAGTGGTGAACAGGACCAGAGACGGGTGGCAATGGTTCTGGTGAGGGTGTGCTGGGCTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591600.1
CDS TCA 72 bp	CCAGGTCCCTCAGGTGGTCGTCATAGTAGGTCTGCATaGAGCCCCGGAAGGTGCTCGGGCTCCAGAACCATT	+
Preference number: 6 (lower is better) Translates to: PGPSGGRHSRSA*SPGRCSGSRTI Trigger: AATGGTTCTGGAGCCCGAGCACCTTCCGGGGCTTCATGCAGACCTACTATGACGACCACCTGAGGGACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592954.2
CDS CAA 72 bp	TTCAAGAGGCTGTCTTTGGATTCGAGGAACCAGGCCTaGGTGAGCGGACCCAGGTCCCTCAGGTGGTCGTCA	+
Preference number: 6 (lower is better) Translates to: FKRLSLDSRNQA*VSGPRSLRWSS Trigger: TGACGACCACCTGAGGGACCTGGGTCCGCTCACCAAGGCCTGGTTCCTCGAATCCAAAGACAGCCTCTTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592954.2

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