Pregenerated sensors for APOC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000110245Ensembl transcript IDs: ENST00000227667.8, ENST00000375345.3, ENST00000433777.5, ENST00000470144.1, ENST00000630701.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACGGCAGCCCTGGAGATTaGAGGACCCAAGGAGCTCGC | + |
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Preference number: 2 (lower is better) Translates to: PGMRWGRRALRILSLLSNGSPGD*RTQGAR Trigger: GCGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCC...GTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGAAGGAGCTCGCAGGATaGATAGGCAGGTGGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRILSLLSNLQGQPWRLQKELAG*IGRWTW Trigger: CCAAGTCCACCTGCCTATCCATCCTGCGAGCTCCTT...CTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGAAGGAGCTCGCAGGATaGATAGGCAGGTGGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: MRWGRRALRILSLLSNLQKELAG*IGRWTW Trigger: CCAAGTCCACCTGCCTATCCATCCTGCGAGCTCCTT...CTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| 3UTR-3UTR CAA 90 bp | GGGCCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCGGGCAGCCCTGGAGATaGCAGGACCCAAGGAGCTCG | + |
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Preference number: 3 (lower is better) Translates to: GPGMRWGRRALRILSLLSGQPWR*QDPRSS Trigger: CGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCC...GCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| 3UTR CCA 72 bp | ATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTaGAGATTGCAGGACCCAAGGAGCTCGCAGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: ILSLLSNLQGQP*RLQDPRSSQDG Trigger: TCCATCCTGCGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | GGGCCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCGCCTGCTGGGCCACCTaGGACTCCTGCACGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GPGMRWGRRALRILSLLSACWAT*DSCTLL Trigger: GAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGC...GCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | ATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCACAGCCCCTGGCCTGCTaGGCCACCTGGGACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILSLLSNLQGQPWRLQDPQPLAC*ATWDSC Trigger: GCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGGCTG...TGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | AATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCCCTGGGGAGGTGGCGTaGCCCCTGGAGCAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: NTVPFKQPTGAALEIAGPPGEVA*PLEQLP Trigger: AGGCAGCTGCTCCAGGGGCCACGCCACCTCCCCAGG...GGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000375345.3 |
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| CDS-3UTR TCA 90 bp | GGGCCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCCAAGGAAGTGTCCTGTaGGGGGCACCCCAGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GPGMRWGRRALRILSLLSQGSVL*GAPQVP Trigger: GGGGACCTGGGGTGCCCCTCACAGGACACTTCCTTG...GCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | CTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGGGCAGCCCTGGAGATTaGAGGACCCAAGGAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LSLLSNLQGQPWRLQDPRGSPGD*RTQGAR Trigger: GCGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCC...CCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | AGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGGCCTGCTGGGCCACCTaGGACTCCTGCACGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: RRALRILSLLSNLQGQPWACWAT*DSCTLL Trigger: GAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGC...CCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | CCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCAGCCCCTGGCCTGCTaGGCCACCTGGGACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PGMRWGRRALRILSLLSNQPLAC*ATWDSC Trigger: GCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGGCTG...GTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | AGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCCTGGCCTGCTaGGCCACCTGGGACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RWGRRALRILSLLSNLQGQPLAC*ATWDSC Trigger: GCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGGCTG...CCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | CTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGTCAGGCAGCCACGGCTaGAGTTGGTCTGACCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSLLSNLQGQPWRLQDPRSGSHG*SWSDLR Trigger: CCTGAGGTCAGACCAACTTCAGCCGTGGCTGCCTGA...CCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | CTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGGAGTACCCGGGGCTaGATGGCACCTCTGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSLLSNLQGQPWRLQDPRRSTRG*MAPLFL Trigger: CAGGAACAGAGGTGCCATGCAGCCCCGGGTACTCCT...CCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | CCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGCTCAGGAGTACCCGGGGCTaGATGGCACCTCTGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PFKQPTGAALEIAGPKELRSTRG*MAPLFL Trigger: CAGGAACAGAGGTGCCATGCAGCCCCGGGTACTCCT...GAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | ACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCACTCTGGACCCCTCCCTaGGGAGGTGGCGTGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TENTVPFKQPTGAALEIALWTPP*GGGVAP Trigger: AGGGGCCACGCCACCTCCCCAGGGAGGGGTCCAGAG...TGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000375345.3 |
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| CDS-3UTR GCA 90 bp | ATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAGGGACTCCTGCACGCTaGTCAGTGCATCCTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ILSLLSNLQGQPWRLQDPGTPAR*SVHPWR Trigger: CCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCC...TGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | AATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCGCCACCTGGGACTCCTaGACGCTGCTCAGTGCATCC | + |
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Preference number: 4 (lower is better) Translates to: NTVPFKQPTGAALEIAGPATWDS*TLLSAS Trigger: GGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGC...GGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | CCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGCTCTGCTCAGTGCATCCTTaGCGGTCTTGGTGGCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PFKQPTGAALEIAGPKELCSVHP*RSWWRA Trigger: AGCACGCCACCAAGACCGCCAAGGATGCACTGAGCA...GAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | GGGCCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCCGGCTGAAGTTGGTCTaGCCTCAGGGTCCAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: GPGMRWGRRALRILSLLSRLKLV*PQGPNP Trigger: GGGATTTGGACCCTGAGGTCAGACCAACTTCAGCCG...GCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | AATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCTCAGGCAGCCACGGCTaGAGTTGGTCTGACCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NTVPFKQPTGAALEIAGPSGSHG*SWSDLR Trigger: CCTGAGGTCAGACCAACTTCAGCCGTGGCTGCCTGA...GGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | ATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAGTGGACTTGGGGTATTaGGGTCTCAGGCAGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: ILSLLSNLQGQPWRLQDPVDLGY*GLRQPR Trigger: CCGTGGCTGCCTGAGACCTCAATACCCCAAGTCCAC...TGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | CTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGGGACTCCTGCACGCTaGTCAGTGCATCCTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LRILSLLSNLQGQPWRLQGTPAR*SVHPWR Trigger: CCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCC...CTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | CCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACGCCACCTGGGACTCCTaGACGCTGCTCAGTGCATCC | + |
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Preference number: 4 (lower is better) Translates to: PGMRWGRRALRILSLLSNATWDS*TLLSAS Trigger: GGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGC...GTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | AGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGGCCACCTGGGACTCCTaGACGCTGCTCAGTGCATCC | + |
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Preference number: 4 (lower is better) Translates to: RWGRRALRILSLLSNLQGATWDS*TLLSAS Trigger: GGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGC...CCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | AGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACGTACCCGGGGCTGCATaGCACCTCTGTTCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RILSLLSNLQGQPWRLQDVPGAA*HLCSWS Trigger: GCTCCAGGAACAGAGGTGCCATGCAGCCCCGGGTAC...GTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000227667.8 |
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| CDS-3UTR CCA 90 bp | CCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGCTCCCTTGGCGGTCTTGGTaGCGTGCTTCATGTAACCCT | + |
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Preference number: 4 (lower is better) Translates to: PFKQPTGAALEIAGPKELPWRSW*RASCNP Trigger: AGGGTTACATGAAGCACGCCACCAAGACCGCCAAGG...GAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | ATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGCCTGCTGGGCCACCTaGGACTCCTGCACGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: MRWGRRALRILSLLSNLQACWAT*DSCTLL Trigger: GAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGC...CTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | ATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAGGGCCAGGCATGAGGTaGGGTAGGAGAGCACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ILSLLSNLQGQPWRLQDPGPGMR*GRRALR Trigger: TCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCC...TGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | AGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGGGGCCAGGCATGAGGTaGGGTAGGAGAGCACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RRALRILSLLSNLQGQPWGPGMR*GRRALR Trigger: TCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCC...CCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | CCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACGTGGACTTGGGGTATTaGGGTCTCAGGCAGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: PGMRWGRRALRILSLLSNVDLGY*GLRQPR Trigger: CCGTGGCTGCCTGAGACCTCAATACCCCAAGTCCAC...GTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | ATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGCAAGGAAGTGTCCTGTaGGGGGCACCCCAGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: MRWGRRALRILSLLSNLQQGSVL*GAPQVP Trigger: GGGGACCTGGGGTGCCCCTCACAGGACACTTCCTTG...CTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | AGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGCTGCACGCTGCTCAGTaGATCCTTGGCGGTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: RRALRILSLLSNLQGQPWLHAAQ*ILGGLG Trigger: ACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAG...CCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR GCA 90 bp | AGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGGGACTCCTGCACGCTaGTCAGTGCATCCTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: STENTVPFKQPTGAALEIGTPAR*SVHPWR Trigger: CCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCC...AATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | CCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGCTCATAGGCAGGTGGACTTaGGGTATTGAGGTCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PFKQPTGAALEIAGPKELIGRWT*GIEVSG Trigger: GCCTGAGACCTCAATACCCCAAGTCCACCTGCCTAT...GAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | CCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACGGGCCAGGCATGAGGTaGGGTAGGAGAGCACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: PGMRWGRRALRILSLLSNGPGMR*GRRALR Trigger: TCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCC...GTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | CCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGCTCCTTGTCCAGCTTTATTaGGAGGCCAGCATGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PFKQPTGAALEIAGPKELLVQLY*EASMPG Trigger: TCCAGGCATGCTGGCCTCCCAATAAAGCTGGACAAG...GAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | CTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGTACCCGGGGCTGCATaGCACCTCTGTTCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LRILSLLSNLQGQPWRLQVPGAA*HLCSCK Trigger: CTTGCAGGAACAGAGGTGCCATGCAGCCCCGGGTAC...CTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | ATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGTCTTTCAGGGAACTaGAGCCATCGGTCACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ILSLLSNLQGQPWRLQDPSLSGN*SHRSPS Trigger: GCTGGGTGACCGATGGCTTCAGTTCCCTGAAAGACT...TGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | CCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCGGCTGAAGTTGGTCTaGCCTCAGGGTCCAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: PGMRWGRRALRILSLLSNRLKLV*PQGPNP Trigger: GGGATTTGGACCCTGAGGTCAGACCAACTTCAGCCG...GTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | AGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTTCAGGCAGCCACGGCTaGAGTTGGTCTGACCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: STENTVPFKQPTGAALEISGSHG*SWSDLR Trigger: CCTGAGGTCAGACCAACTTCAGCCGTGGCTGCCTGA...AATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR TCA 90 bp | AGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGTGGACTTGGGGTATTaGGGTCTCAGGCAGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: STENTVPFKQPTGAALEIVDLGY*GLRQPR Trigger: CCGTGGCTGCCTGAGACCTCAATACCCCAAGTCCAC...AATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAAGGAGTACCCGGGGCTaGATGGCACCTCTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TENTVPFKQPTGAALEIARSTRG*MAPLFL Trigger: CAGGAACAGAGGTGCCATGCAGCCCCGGGTACTCCT...TGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR GCA 90 bp | AGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGACTGCACGCTGCTCAGTaGATCCTTGGCGGTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RALRILSLLSNLQGQPWRLHAAQ*ILGGLG Trigger: ACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAG...TCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR GCA 90 bp | ATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGCAGCCCTGGAGATTaGAGGACCCAAGGAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: MRWGRRALRILSLLSNLQGSPGD*RTQGAR Trigger: GCGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCC...CTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CCA 90 bp | CTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGTGCTCAGTGCATCCTTaGCGGTCTTGGTGGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRILSLLSNLQGQPWRLQCSVHP*RSWWRA Trigger: AGCACGCCACCAAGACCGCCAAGGATGCACTGAGCA...CTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | AATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGCTCGCAGGATaGATAGGCAGGTGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTVPFKQPTGAALEIAGPKELAG*IGRWTW Trigger: CCAAGTCCACCTGCCTATCCATCCTGCGAGCTCCTT...GGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGTACCCGGGGCTGCATaGCACCTCTGTTCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TENTVPFKQPTGAALEIAVPGAA*HLCSCK Trigger: CTTGCAGGAACAGAGGTGCCATGCAGCCCCGGGTAC...TGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGAGTCTTTCAGGGAACTaGAGCCATCGGTCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWGRRALRILSLLSNLQGSLSGN*SHRSPS Trigger: GCTGGGTGACCGATGGCTTCAGTTCCCTGAAAGACT...CCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR TCA 90 bp | AGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTCGGCTGAAGTTGGTCTaGCCTCAGGGTCCAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: STENTVPFKQPTGAALEIRLKLV*PQGPNP Trigger: GGGATTTGGACCCTGAGGTCAGACCAACTTCAGCCG...AATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCCTTGGCGGTCTTGGTaGCGTGCTTCATGTAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWGRRALRILSLLSNLQGPWRSW*RASCNP Trigger: AGGGTTACATGAAGCACGCCACCAAGACCGCCAAGG...CCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | AGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCTTGGCGGTCTTGGTaGCGTGCTTCATGTAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RILSLLSNLQGQPWRLQDPWRSW*RASCNP Trigger: AGGGTTACATGAAGCACGCCACCAAGACCGCCAAGG...GTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | AGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGAAAGGAGCTCGCAGGATaGATAGGCAGGTGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RALRILSLLSNLQGQPWRKELAG*IGRWTW Trigger: CCAAGTCCACCTGCCTATCCATCCTGCGAGCTCCTT...TCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR GCA 90 bp | AGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACTGGCACCTCTGTTCCTaGAAGGAAGTGTCCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RILSLLSNLQGQPWRLQDWHLCS*KEVSCE Trigger: CTCACAGGACACTTCCTTGCAGGAACAGAGGTGCCA...GTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | CTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGATAGGCAGGTGGACTTaGGGTATTGAGGTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRILSLLSNLQGQPWRLQIGRWT*GIEVSG Trigger: GCCTGAGACCTCAATACCCCAAGTCCACCTGCCTAT...CTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCTTGTCCAGCTTTATTaGGAGGCCAGCATGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RWGRRALRILSLLSNLQGLVQLY*EASMPG Trigger: TCCAGGCATGCTGGCCTCCCAATAAAGCTGGACAAG...CCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR GCA 90 bp | AGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTTGGCACCTCTGTTCCTaGAAGGAAGTGTCCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: STENTVPFKQPTGAALEIWHLCS*KEVSCE Trigger: CTCACAGGACACTTCCTTGCAGGAACAGAGGTGCCA...AATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | AGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTATAGGCAGGTGGACTTaGGGTATTGAGGTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STENTVPFKQPTGAALEIIGRWT*GIEVSG Trigger: GCCTGAGACCTCAATACCCCAAGTCCACCTGCCTAT...AATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | AGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTCTTGTCCAGCTTTATTaGGAGGCCAGCATGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: STENTVPFKQPTGAALEILVQLY*EASMPG Trigger: TCCAGGCATGCTGGCCTCCCAATAAAGCTGGACAAG...AATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGCATCCTTGGCGGTCTTaGTGGCGTGCTTCATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: MRWGRRALRILSLLSNLQHPWRS*WRASCN Trigger: GTTACATGAAGCACGCCACCAAGACCGCCAAGGATG...CTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS TCA 90 bp | AGGACCCAGGGCGCTGGGCAAAGGTCACCTGCTGACCAGTGGAGATaGGGGCCTGAGGCAGGGTGTCCAGATGCAGCAAGCGGGCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTQGAGQRSPADQWR*GPEAGCPDAASGRE Trigger: CTCCCGCCCGCTTGCTGCATCTGGACACCCTGCCTCAGGCCCTCATCTCCACTGGTCAGCAGGTGACCTTTGCCCAGCGCCCTGGGTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433777.5 |
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| CDS GCA 90 bp | AGCAGCCTGACAAAGGCCCTGGCCTGCTGGGCCACCTGGGACTCCTaGACGCTGCTCAGTGCATCCTTGGCGGTCTTGGTGGCGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLTKALACWATWDS*TLLSASLAVLVACF Trigger: GAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGCCTTTGTCAGGCTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470144.1 |
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| CDS GCA 90 bp | GCCCCTGGCCTGCTGGGCCACCTGGGACTCCTGCACGCTGCTCAGTaGATCCTTGGCGGTCTTGGTGGCGTGCTTCATGTAACCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: APGLLGHLGLLHAAQ*ILGGLGGVLHVTLH Trigger: ATGCAGGGTTACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS GCA 90 bp | TCACCCAGCCCCTGGCCTGCTGGGCCACCTGGGACTCCTGCACGCTaGTCAGTGCATCCTTGGCGGTCTTGGTGGCGTGCTTCATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPSPWPAGPPGTPAR*SVHPWRSWWRASCN Trigger: GTTACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGGCTGGGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS GCA 90 bp | GGCCCTGGCCTGCTGGGCCACCTGGGACTCCTGCACGCTGCTCAGTaGATCCTTGGCGGTCTTGGTGGCGTGCTTCATGTAACCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GPGLLGHLGLLHAAQ*ILGGLGGVLHVTLH Trigger: ATGCAGGGTTACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470144.1 |
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| CDS CCA 90 bp | CCAGGAGCGCCAGGAGGGCAACAACAAGGAGTACCCGGGGCTGCATaGCACCTCTGTTCCTGCAAGGAAGTGTCCTGTGAGGGGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGAPGGQQQGVPGAA*HLCSCKEVSCEGHP Trigger: GGGGTGCCCCTCACAGGACACTTCCTTGCAGGAACAGAGGTGCCATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000375345.3 ENST00000630701.1 |
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| CDS CCA 90 bp | ACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGCTCGCAGGATaGATAGGCAGGTGGACTTGGGGTATTGAGGTCTCAGGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGAALEIAGPKELAG*IGRWTWGIEVSGSH Trigger: GTGGCTGCCTGAGACCTCAATACCCCAAGTCCACCTGCCTATCCATCCTGCGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CAA 90 bp | ATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAGGGCAGCCCTGGAGATaGCAGGACCCAAGGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ILSLLSNLQGQPWRLQDPGQPWR*QDPRSS Trigger: CGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCC...TGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CAA 90 bp | AGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGCTGCTCAGTGCATCCTaGGCGGTCTTGGTGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRALRILSLLSNLQGQPWLLSAS*AVLVAC Trigger: GCACGCCACCAAGACCGCCAAGGATGCACTGAGCAG...CCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CAA 90 bp | AGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCTGCTCAGTGCATCCTaGGCGGTCTTGGTGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RILSLLSNLQGQPWRLQDLLSAS*AVLVAC Trigger: GCACGCCACCAAGACCGCCAAGGATGCACTGAGCAG...GTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CAA 90 bp | ACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGGCAGCCCTGGAGATaGCAGGACCCAAGGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TENTVPFKQPTGAALEIAGQPWR*QDPRSS Trigger: CGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCC...TGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CAA 90 bp | AGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGGGCAGCCCTGGAGATaGCAGGACCCAAGGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: STENTVPFKQPTGAALEIGQPWR*QDPRSS Trigger: CGAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCC...AATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGGCATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCTCTTGTCCAGCTTTATaGGGAGGCCAGCATGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGMRWGRRALRILSLLSSCPAL*GGQHAW Trigger: CCAGGCATGCTGGCCTCCCAATAAAGCTGGACAAGA...GCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS TCA 90 bp | ATAGGCAGGTGGACTTGGGGTATTGAGGTCTCAGGCAGCCACGGCTaGAGTTGGTCTGACCTCAGGGTCCAAATCCCAGAACTCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IGRWTWGIEVSGSHG*SWSDLRVQIPELRE Trigger: TTCTCTGAGTTCTGGGATTTGGACCCTGAGGTCAGACCAACTTCAGCCGTGGCTGCCTGAGACCTCAATACCCCAAGTCCACCTGCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CAA 90 bp | ATGAGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGCTGCTCAGTGCATCCTaGGCGGTCTTGGTGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MRWGRRALRILSLLSNLQLLSAS*AVLVAC Trigger: GCACGCCACCAAGACCGCCAAGGATGCACTGAGCAG...CTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS-3UTR CAA 90 bp | CCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCAAGGAGCTCCAGAACTCAGAGAACTaGTCCTTAACGGTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFKQPTGAALEIAGPKELQNSEN*SLTVLQ Trigger: CTGGAGCACCGTTAAGGACAAGTTCTCTGAGTTCTG...GAGCTCCTTGGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CAA 90 bp | AATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGATTGCAGGACCCTCTTGTCCAGCTTTATaGGGAGGCCAGCATGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NTVPFKQPTGAALEIAGPSCPAL*GGQHAW Trigger: CCAGGCATGCTGGCCTCCCAATAAAGCTGGACAAGA...GGGTCCTGCAATCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGGTAGGAGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGTCTTGTCCAGCTTTATaGGGAGGCCAGCATGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWGRRALRILSLLSNLQGSCPAL*GGQHAW Trigger: CCAGGCATGCTGGCCTCCCAATAAAGCTGGACAAGA...CCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS-3UTR CAA 90 bp | AGAGCACTGAGAATACTGTCCCTTTTAAGCAACCTACAGGGGCAGCCCTGGAGACAGAACTCAGAGAACTaGTCCTTAACGGTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RALRILSLLSNLQGQPWRQNSEN*SLTVLQ Trigger: CTGGAGCACCGTTAAGGACAAGTTCTCTGAGTTCTG...TCTCCAGGGCTGCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
||
| CDS GCA 72 bp | CCCTGGCCTGCTGGGCCACCTGGGACTCCTGCACGCTaGTCAGTGCATCCTTGGCGGTCTTGGTGGCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PWPAGPPGTPAR*SVHPWRSWWRA Trigger: AGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000470144.1 ENST00000630701.1 |
||
| CDS CCA 72 bp | AGCAGCCTGACAAAGGCCCTGGCCTGCTGGGCCACCTaGGACTCCTGCACGCTGCTCAGTGCATCCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSLTKALACWAT*DSCTLLSASLA Trigger: CGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGCCTTTGTCAGGCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470144.1 |
||
| CDS TCA 72 bp | GGCGCTGGGCAAAGGTCACCTGCTGACCAGTGGAGATaGGGGCCTGAGGCAGGGTGTCCAGATGCAGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAGQRSPADQWR*GPEAGCPDAAS Trigger: GCTTGCTGCATCTGGACACCCTGCCTCAGGCCCTCATCTCCACTGGTCAGCAGGTGACCTTTGCCCAGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433777.5 |
||
| CDS GCA 72 bp | CTGCTGGGCCACCTGGGACTCCTGCACGCTGCTCAGTaGATCCTTGGCGGTCTTGGTGGCGTGCTTCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: LLGHLGLLHAAQ*ILGGLGGVLHV Trigger: TACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000470144.1 ENST00000630701.1 |
||
| CDS GCA 72 bp | AGCGCCAGGAGGGCAACAACAAGGAGTACCCGGGGCTaGATGGCACCTCTGTTCCTGCAAGGAAGTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SARRATTRSTRG*MAPLFLQGSVL Trigger: CAGGACACTTCCTTGCAGGAACAGAGGTGCCATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375345.3 ENST00000630701.1 |
||
| CDS CCA 72 bp | CCACCTGGGACTCCTGCACGCTGCTCAGTGCATCCTTaGCGGTCTTGGTGGCGTGCTTCATGTAACCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPGTPARCSVHP*RSWWRASCNPA Trigger: TGCAGGGTTACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000470144.1 ENST00000630701.1 |
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| CDS CCA 72 bp | GCCCTGGAGATTGCAGGACCCAAGGAGCTCGCAGGATaGATAGGCAGGTGGACTTGGGGTATTGAGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ALEIAGPKELAG*IGRWTWGIEVS Trigger: TGAGACCTCAATACCCCAAGTCCACCTGCCTATCCATCCTGCGAGCTCCTTGGGTCCTGCAATCTCCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS TCA 72 bp | TGGACTTGGGGTATTGAGGTCTCAGGCAGCCACGGCTaGAGTTGGTCTGACCTCAGGGTCCAAATCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: WTWGIEVSGSHG*SWSDLRVQIPE Trigger: TTCTGGGATTTGGACCCTGAGGTCAGACCAACTTCAGCCGTGGCTGCCTGAGACCTCAATACCCCAAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000227667.8 ENST00000375345.3 ENST00000630701.1 |
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| CDS GCA 72 bp | AGCGCCAGGAGGGCAACAACAAGGAGTACCCGGGGCTaGATGGCACCTCTGTTCCTGTTTTATATCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SARRATTRSTRG*MAPLFLFYIIS Trigger: GGAGATGATATAAAACAGGAACAGAGGTGCCATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433777.5 |
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