Pregenerated sensors for APOC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000234906Ensembl transcript IDs: ENST00000252490.7, ENST00000585786.1, ENST00000590360.2, ENST00000591597.5, ENST00000592257.5
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTGCTCATTAAATGTTGGCTGGACTGAGTCAGCCCCTCCATCTTaGCCCTTGAGTCCTCAGAAAAGCAGTGCCATCCATGAGAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: RCSLNVGWTESAPPS*PLSPQKSSAIHEKQ Trigger: TTGCTTCTCATGGATGGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAATGAGCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR CAA 90 bp | TCATTAAATGTTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTaGAGTCCTCAGAAAAGCAGTGCCATCCATGAGAAGCAACTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SLNVGWTESAPPSWP*SPQKSSAIHEKQLE Trigger: TTCAAGTTGCTTCTCATGGATGGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGATGCAAGAGCTACTaGGAAGGGGGAGCTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMGCKSY*EGGAQS Trigger: AGACTGAGCTCCCCCTTCCCAGTAGCTCTTGCATCC...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTGGATGCAAGAGCTACTaGGAAGGGGGAGCTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGGCKSY*EGGAQS Trigger: AGACTGAGCTCCCCCTTCCCAGTAGCTCTTGCATCC...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGCTCCATCTTGGCCCTTaGGTCCTCAGAAAAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMLHLGP*VLRKAV Trigger: CACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAG...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR-3UTR TCA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTAAATGTTGGCTGGACTaGGTCAGCCCCTCCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGKCWLD*VSPSIL Trigger: CAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTT...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTTCATTAAATGTTGGCTaGACTGAGTCAGCCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGSLNVG*TESAPP Trigger: TGGAGGGGCTGACTCAGTCCAGCCAACATTTAATGA...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGTCATTAAATGTTGGCTaGACTGAGTCAGCCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMSLNVG*TESAPP Trigger: TGGAGGGGCTGACTCAGTCCAGCCAACATTTAATGA...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR CCA 72 bp | TTCAGGCTAGAGTTGGGAGGAGGATGCAAGAGCTACTaGGAAGGGGGAGCTCAGTCTGAACCTGGGGGATCA | + |
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Preference number: 3 (lower is better) Translates to: FRLELGGGCKSY*EGGAQSEPGGS Trigger: TGATCCCCCAGGTTCAGACTGAGCTCCCCCTTCCCAGTAGCTCTTGCATCCTCCTCCCAACTCTAGCCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000252490.7 ENST00000590360.2 ENST00000591597.5 ENST00000592257.5 |
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| 3UTR TCA 72 bp | TTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTTaGGTCCTCAGAAAAGCAGTGCCATCCATGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: LAGLSQPLHLGP*VLRKAVPSMRS Trigger: GCTTCTCATGGATGGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR GCA 72 bp | AAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTaGTGTACAAGTCCCTGGGGAGAAAGCACAGATGGT | + |
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Preference number: 3 (lower is better) Translates to: KCLCKCSWLLCF*CTSPWGESTDG Trigger: ACCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| 3UTR-3UTR CAA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGCCTCCATCTTGGCCCTaGAGTCCTCAGAAAAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWPPSWP*SPQKSS Trigger: ACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGG...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | GGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTATGTGGCAGGCTGACTaGAGGCGGCTGTTCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GPGCSRWYGPDPISPGAGMWQAD*RRLFLW Trigger: CCACAGGAACAGCCGCCTCCAGTCAGCCTGCCACAT...ACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR GCA 90 bp | GGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTCTTCTGGGTCCTGGATaGAGTCGGTGGTATGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPGCSRWYGPDPISPGAGLLGPG*SRWYGP Trigger: TGGCCCATACCACCGACTGCATCCAGGACCCAGAAG...ACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | GGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTAGAGATTCCTTCACCTaGGTGAGGAAGGTCGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: GPGCSRWYGPDPISPGAGRDSFT*VRKVGL Trigger: TAGCCCGACCTTCCTCACCCAGGTGAAGGAATCTCT...ACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR GCA 90 bp | TGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAAAGCAGTGCCCTAGGCATCTCATCTTaGTGGGGCTGTTGGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: WTESAPPSWPLSPQKSSALGISS*WGCWVP Trigger: GGGGACCCAACAGCCCCAGCAAGATGAGATGCCTAG...GGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTTGCTCATGGCTGCTGTaGTTTTGCTGTACAAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GPGCSRWYGPDPISPGAGCSWLL*FCCTSP Trigger: GGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCA...ACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | GAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAAAGCAGTGCCATCCATGGCATCTCATCTTGCTaGGGCTGTTGGGTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ESAPPSWPLSPQKSSAIHGISSC*GCWVPW Trigger: CCAGGGGACCCAACAGCCCCAGCAAGATGAGATGCC...ATGGATGGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | CCTGAACTTCTGGGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTTGGGGCCTGAACTTCTaGGTCCTGGATGCAGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: PELLGPGCSRWYGPDPISWGLNF*VLDAVG Trigger: ACCGACTGCATCCAGGACCCAGAAGTTCAGGCCCCA...AGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACCCAGAAGTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR TCA 90 bp | CCTGAACTTCTGGGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTAGATCCTGCTCTGTGTaGGCTCGGTGTCCCAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PELLGPGCSRWYGPDPISRSCSV*ARCPSQ Trigger: TTGACTGGGACACCGAGCTCACACAGAGCAGGATCT...AGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACCCAGAAGTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR TCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGTGTCATGTGGCAGGCTaGCTGGAGGCGGCTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWCHVAG*LEAAVP Trigger: AGGAACAGCCGCCTCCAGTCAGCCTGCCACATGACA...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | TGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAAAGCAGTGCCGGCTGTTGGGTCCCCTaGACCTCAAATCCCAATACC | + |
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Preference number: 4 (lower is better) Translates to: WTESAPPSWPLSPQKSSAGCWVP*TSNPNT Trigger: GGTATTGGGATTTGAGGTCCAGGGGACCCAACAGCC...GGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | CCTGAACTTCTGGGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTTCCCATGCATGGACTTaGACACAGCCCCCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PELLGPGCSRWYGPDPISSHAWT*TQPPSW Trigger: CCAAGAAGGGGGCTGTGTCCAAGTCCATGCATGGGA...AGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACCCAGAAGTTCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR TCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWGGCLC*LPVTGE Trigger: CTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCC...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR TCA 90 bp | GTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGAGGGGCAGGTGCTACCTaGGTTTCTCATCTACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VLMAAVLLLYKSLGRKHRGAGAT*VSHLQR Trigger: CCGCTGTAGATGAGAAACTCAGGTAGCACCTGCCCC...TCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR GCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGCTAGGCATCTCATCTTaGTGGGGCTGTTGGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWLGISS*WGCWVP Trigger: GGGGACCCAACAGCCCCAGCAAGATGAGATGCCTAG...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR GCA 90 bp | TTAAATGTTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGCTAGGCATCTCATCTTaGTGGGGCTGTTGGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LNVGWTESAPPSWPLSPQLGISS*WGCWVP Trigger: GGGGACCCAACAGCCCCAGCAAGATGAGATGCCTAG...CTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTAAATGCCTGTGTAAGTaGTCATGGCTGCTGTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GPGCSRWYGPDPISPGAGKCLCK*SWLLCF Trigger: AAAGCACAGCAGCCATGAGCACTTACACAGGCATTT...ACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | TGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAAAGCAGTGCCTTCTCGTACAGGTTCTaGGCGGCTGTCTTTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: WTESAPPSWPLSPQKSSAFSYRF*AAVFAD Trigger: GTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAA...GGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| 3UTR CAA 72 bp | GTTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTaGAGTCCTCAGAAAAGCAGTGCCATCCATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VGWTESAPPSWP*SPQKSSAIHEK Trigger: CTTCTCATGGATGGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | GAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAAAGCAGTGCCATCCATGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: ESAPPSWPLSPQKSSAIHDKKQS*EESCAH Trigger: ATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTC...ATGGATGGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | TTAAATGTTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGTCTTGCTGGGGCTGTTaGGTCCCCTGGACCTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: LNVGWTESAPPSWPLSPQSCWGC*VPWTSN Trigger: ATTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGA...CTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGATGCAGTCGGTGGTATaGGCCAGACCCCATTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWMQSVV*ARPHFS Trigger: GGAGAAATGGGGTCTGGCCCATACCACCGACTGCAT...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR GCA 90 bp | GAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAAAGCAGTGCCATCCATTGCTCATGGCTGCTGTaGTTTTGCTGTACAAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ESAPPSWPLSPQKSSAIHCSWLL*FCCTSP Trigger: GGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCA...ATGGATGGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR GCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGTGGCTGCTGTGCTTTTaGTGTACAAGTCCCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWWLLCF*CTSPWG Trigger: TCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCA...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWDKKQS*EESCAH Trigger: ATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTC...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | CCTGAACTTCTGGGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTCTGACTCCCAGTAACTaGAGAGAGATTCCTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: PELLGPGCSRWYGPDPISLTPSN*REIPSP Trigger: AGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAG...AGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACCCAGAAGTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR GCA 90 bp | GTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGACAGTCAAGTTTCCCATaGATGGACTTGGACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLMAAVLLLYKSLGRKHRQSSFP*MDLDTA Trigger: GGCTGTGTCCAAGTCCATGCATGGGAAACTTGACTG...TCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGCATCTCATCTTGCTaGGGCTGTTGGGTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KNACVSAHGCCAFAVQVPGISSC*GCWVPW Trigger: CCAGGGGACCCAACAGCCCCAGCAAGATGAGATGCC...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | GTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGAACACAGCCCCCTTCTTaGGCCTCACTTTCCAACATT | + |
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Preference number: 4 (lower is better) Translates to: VLMAAVLLLYKSLGRKHRTQPPS*ASLSNI Trigger: AATGTTGGAAAGTGAGGCCCAAGAAGGGGGCTGTGT...TCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAAGGCGGCTGTTCCTGTaGTCACGCCCCACTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQRRLFL*SRPTLV Trigger: CACCAGAGTGGGGCGTGACCACAGGAACAGCCGCCT...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | TTAAATGTTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGCTGTGTAAGTGCTCATaGCTGCTGTGCTTTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LNVGWTESAPPSWPLSPQLCKCS*LLCFCC Trigger: ACAGCAAAAGCACAGCAGCCATGAGCACTTACACAG...CTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGCTGTGTAAGTGCTCATaGCTGCTGTGCTTTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWLCKCS*LLCFCC Trigger: ACAGCAAAAGCACAGCAGCCATGAGCACTTACACAG...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | TTAAATGTTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGTCATTAAATGTTGGCTaGACTGAGTCAGCCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LNVGWTESAPPSWPLSPQSLNVG*TESAPP Trigger: TGGAGGGGCTGACTCAGTCCAGCCAACATTTAATGA...CTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTCCTGGATGCAGTCGGTaGTATGGGCCAGACCCCATT | + |
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Preference number: 4 (lower is better) Translates to: KNACVSAHGCCAFAVQVPPGCSR*YGPDPI Trigger: AATGGGGTCTGGCCCATACCACCGACTGCATCCAGG...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAACCAGAGACCAGACTCTaGCAGGCTGTCCTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQPETRL*QAVLTS Trigger: GCTGGTGAGGACAGCCTGCCAGAGTCTGGTCTCTGG...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592257.5 |
||
| CDS-3UTR TCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQGGCLC*LPVTGE Trigger: CTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCC...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
||
| CDS-3UTR GCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGGTAAGTGCTCATGGCTaGTGTGCTTTTGCTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWVSAHG*CAFAVQ Trigger: TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTAC...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS-3UTR GCA 90 bp | TTAAATGTTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAATGCCTGTGTAAGTaGTCATGGCTGCTGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNVGWTESAPPSWPLSPQKCLCK*SWLLCF Trigger: AAAGCACAGCAGCCATGAGCACTTACACAGGCATTT...CTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGATGCAAGAGCTACTaGGAAGGGGGAGCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNACVSAHGCCAFAVQVPGCKSY*EGGAQS Trigger: AGACTGAGCTCCCCCTTCCCAGTAGCTCTTGCATCC...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000592257.5 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNACVSAHGCCAFAVQVPDKKQS*EESCAH Trigger: ATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTC...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
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| CDS-3UTR CCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAATCTTGCTGGGGCTGTTaGGTCCCCTGGACCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQSCWGC*VPWTSN Trigger: ATTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGA...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS-3UTR CCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAATTCTCGTACAGGTTCTaGGCGGCTGTCTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQFSYRF*AAVFAD Trigger: GTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAA...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
||
| CDS-3UTR CCA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGAGCACAGAAAGAACTTaGTCAGTAAAAATGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWSTERT*SVKMPV Trigger: CACAGGCATTTTTACTGACCAAGTTCTTTCTGTGCT...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTTGCTGTACAAGTCCCTaGGGAGAAAGCACAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNACVSAHGCCAFAVQVPCCTSP*GESTDG Trigger: ACCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCA...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS-3UTR GCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAATTCTCCAGGGGCAGGTaGTACCTGAGTTTCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQFSRGR*YLSFSS Trigger: AGATGAGAAACTCAGGTAGCACCTGCCCCTGGAGAA...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS-3UTR CCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGCATCTCATCTTGCTaGGGCTGTTGGGTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMGISSC*GCWVPW Trigger: CCAGGGGACCCAACAGCCCCAGCAAGATGAGATGCC...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTCTGACTCCCAGTAACTaGAGAGAGATTCCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KNACVSAHGCCAFAVQVPLTPSN*REIPSP Trigger: TGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAG...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592257.5 |
||
| CDS-3UTR TCA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGGGCLC*LPVTGE Trigger: CTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCC...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWGGCLC*LPVTGE Trigger: CTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCC...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR GCA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTAAATGCCTGTGTAAGTaGTCATGGCTGCTGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNACVSAHGCCAFAVQVPKCLCK*SWLLCF Trigger: AAAGCACAGCAGCCATGAGCACTTACACAGGCATTT...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
||
| CDS-3UTR CCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAACTGTGTAAGTGCTCATaGCTGCTGTGCTTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQLCKCS*LLCFCC Trigger: ACAGCAAAAGCACAGCAGCCATGAGCACTTACACAG...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
||
| CDS-3UTR GCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTAAGTGCTCATGGCTaGTGTGCTTTTGCTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQVSAHG*CAFAVQ Trigger: TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTAC...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
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| CDS-3UTR CCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGTCTTGCTGGGGCTGTTaGGTCCCCTGGACCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMSCWGC*VPWTSN Trigger: ATTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGA...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGGATGCAAGAGCTACTaGGAAGGGGGAGCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWGCKSY*EGGAQS Trigger: AGACTGAGCTCCCCCTTCCCAGTAGCTCTTGCATCC...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGCTCCATCTTGGCCCTTaGGTCCTCAGAAAAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWLHLGP*VLRKAV Trigger: CACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAG...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGAAATGTTGGCTGGACTaGGTCAGCCCCTCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWKCWLD*VSPSIL Trigger: CAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTT...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR TCA 90 bp | GATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTTAGAGGAGAGGCACTTTTGGTaGCGAAGAACATGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DYLLLLFTALFPWTHGLEERHFW*RRTCTG Trigger: CCCTGTGCATGTTCTTCGTCACCAAAAGTGCCTCTC...CTCTAACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWDKKQS*EESCAH Trigger: ATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTC...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGAGAGATTCCTTCACCTaGGTGAGGAAGGTCGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMRDSFT*VRKVGL Trigger: TAGCCCGACCTTCCTCACCCAGGTGAAGGAATCTCT...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGAGAGATTCCTTCACCTaGGTGAGGAAGGTCGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWRDSFT*VRKVGL Trigger: TAGCCCGACCTTCCTCACCCAGGTGAAGGAATCTCT...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTTTCTCGTACAGGTTCTaGGCGGCTGTCTTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGFSYRF*AAVFAD Trigger: GTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAA...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR TCA 90 bp | GATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTTAGAGTCCACACGTAGGAGATaGGGAAGTACGGCAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DYLLLLFTALFPWTHGLESTRRR*GSTAER Trigger: TCTTTCTGCCGTACTTCCTCATCTCCTACGTGTGGA...CTCTAACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAAGCACAGAAAGAACTTaGTCAGTAAAAATGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSKNACVSAHGCCAFAVQSTERT*SVKMPV Trigger: CACAGGCATTTTTACTGACCAAGTTCTTTCTGTGCT...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
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| CDS-3UTR CCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGCTGACTCCCAGTAACTaGAGAGAGATTCCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMLTPSN*REIPSP Trigger: AGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAG...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTCTGACTCCCAGTAACTaGAGAGAGATTCCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGLTPSN*REIPSP Trigger: AGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAG...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGTAAGTGCTCATGGCTaGTGTGCTTTTGCTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMVSAHG*CAFAVQ Trigger: TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTAC...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR GCA 90 bp | GATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTTAGAGGTAAGTGCTCATGGCTaGTGTGCTTTTGCTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: DYLLLLFTALFPWTHGLEVSAHG*CAFAVQ Trigger: TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTAC...CTCTAACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS-3UTR GCA 90 bp | GATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTTAGAGAAATGCCTGTGTAAGTaGTCATGGCTGCTGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DYLLLLFTALFPWTHGLEKCLCK*SWLLCF Trigger: AAAGCACAGCAGCCATGAGCACTTACACAGGCATTT...CTCTAACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTAGCACAGAAAGAACTTaGTCAGTAAAAATGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGSTERT*SVKMPV Trigger: CACAGGCATTTTTACTGACCAAGTTCTTTCTGTGCT...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CCA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGAGCACAGAAAGAACTTaGTCAGTAAAAATGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMSTERT*SVKMPV Trigger: CACAGGCATTTTTACTGACCAAGTTCTTTCTGTGCT...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
||
| CDS TCA 90 bp | AGTGTCCAGAGACCTGGAACATTGAGGGGGTGTCATGTGGCAGGCTaGCTGGAGGCGGCTGTTCCTGTGGTCACGCCCCACTCTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVQRPGTLRGCHVAG*LEAAVPVVTPHSGG Trigger: CCCACCAGAGTGGGGCGTGACCACAGGAACAGCCGCCTCCAGTCAGCCTGCCACATGACACCCCCTCAATGTTCCAGGTCTCTGGACACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS-3UTR CAA 90 bp | GGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTTTCCCATGCATGGACTaGGACACAGCCCCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPGCSRWYGPDPISPGAGFPCMD*DTAPFL Trigger: CAAGAAGGGGGCTGTGTCCAAGTCCATGCATGGGAA...ACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS CCA 90 bp | TCCTTCACCTGGGTGAGGAAGGTCGGGCTAGGCATCTCATCTTGCTaGGGCTGTTGGGTCCCCTGGACCTCAAATCCCAATACCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFTWVRKVGLGISSC*GCWVPWTSNPNTRR Trigger: CCTCCTGGTATTGGGATTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGATGAGATGCCTAGCCCGACCTTCCTCACCCAGGTGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252490.7 ENST00000585786.1 ENST00000590360.2 ENST00000591597.5 |
||
| CDS GCA 90 bp | GATTCCTTCACCTGGGTGAGGAAGGTCGGGCTAGGCATCTCATCTTaGTGGGGCTGTTGGGTCCCCTGGACCTCAAATCCCAATACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSFTWVRKVGLGISS*WGCWVPWTSNPNTR Trigger: CCTGGTATTGGGATTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGATGAGATGCCTAGCCCGACCTTCCTCACCCAGGTGAAGGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000252490.7 ENST00000585786.1 ENST00000590360.2 ENST00000591597.5 |
||
| CDS-3UTR CAA 90 bp | CCTGAACTTCTGGGTCCTGGATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTTCTGGGCGGCTGTCTTaGCTGACTCCCAGTAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PELLGPGCSRWYGPDPISSGRLS*LTPSNW Trigger: CCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGA...AGAAATGGGGTCTGGCCCATACCACCGACTGCATCCAGGACCCAGAAGTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS TCA 90 bp | CGGTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTGCTACCTaGGTTTCTCATCTACAGCGGGCAGGTATGTCTTCTCGTACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RWYGPDPISPGAGAT*VSHLQRAGMSSRTG Trigger: ACCTGTACGAGAAGACATACCTGCCCGCTGTAGATGAGAAACTCAGGTAGCACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS GCA 90 bp | ATGCAGTCGGTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTaGTACCTGAGTTTCTCATCTACAGCGGGCAGGTATGTCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: MQSVVWARPHFSRGR*YLSFSSTAGRYVFS Trigger: CGAGAAGACATACCTGCCCGCTGTAGATGAGAAACTCAGGTAGCACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACCGACTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS CCA 90 bp | CCCCTGGACCTCAAATCCCAATACCAGGAGGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCATAGTGTCCAGAGACCAGACTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLDLKSQYQEDKKQS*EESCAHSVQRPDSG Trigger: GCCAGAGTCTGGTCTCTGGACACTATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTCCTCCTGGTATTGGGATTTGAGGTCCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000591597.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGAGCTAGGCATCTCATCTaGCTGGGGCTGTTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLMAAVLLLYKSLGRKHRARHLI*LGLLGP Trigger: GGGACCCAACAGCCCCAGCAAGATGAGATGCCTAGC...TCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS GCA 90 bp | GAGATCCTGCTCTGTGTGAGCTCGGTGTCCCAGTCAAGTTTCCCATaGATGGACTTGGACACAGCCCCCTTCTTGGGCCTCACTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EILLCVSSVSQSSFP*MDLDTAPFLGLTFQ Trigger: TTGGAAAGTGAGGCCCAAGAAGGGGGCTGTGTCCAAGTCCATGCATGGGAAACTTGACTGGGACACCGAGCTCACACAGAGCAGGATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CAA 90 bp | TGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAAAGCAGTGCCCCTCCATCTTGGCCCTaGAGTCCTCAGAAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WTESAPPSWPLSPQKSSAPPSWP*SPQKSS Trigger: ACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGG...GGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS TCA 90 bp | GGGCAGGTATGTCTTCTCGTACAGGTTCTGGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAGAGATTCCTTCACCTGGGTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQVCLLVQVLGGCLC*LPVTGERFLHLGEE Trigger: TTCCTCACCCAGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAAGACATACCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000252490.7 ENST00000585786.1 ENST00000590360.2 |
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| CDS CCA 90 bp | CCCCTGGACCTCAAATCCCAATACCAGGAGGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCATAGTGTCCAGAGACCTGGAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: PLDLKSQYQEDKKQS*EESCAHSVQRPGTL Trigger: CAATGTTCCAGGTCTCTGGACACTATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTCCTCCTGGTATTGGGATTTGAGGTCCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CAA 90 bp | GTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGAGACACAGCCCCCTTCTaGGGCCTCACTTTCCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VLMAAVLLLYKSLGRKHRDTAPF*GLTFQH Trigger: ATGTTGGAAAGTGAGGCCCAAGAAGGGGGCTGTGTC...TCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CAA 90 bp | GTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGAATGGCTGCTGTGCTTTaGCTGTACAAGTCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLMAAVLLLYKSLGRKHRMAAVL*LYKSLG Trigger: CCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCAT...TCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS CCA 90 bp | GATTCCTTCACCAAATCCCAATACCAGGAGGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCATAGTGTCCAGAGACCAGACTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DSFTKSQYQEDKKQS*EESCAHSVQRPDSG Trigger: GCCAGAGTCTGGTCTCTGGACACTATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTCCTCCTGGTATTGGGATTTGGTGAAGGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592257.5 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGAAAAGCAGTGCCATCCATATGGCTGCTGTGCTTTaGCTGTACAAGTCCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESAPPSWPLSPQKSSAIHMAAVL*LYKSLS Trigger: ACTCAGGGACTTGTACAGCAAAAGCACAGCAGCCAT...ATGGATGGCACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS TCA 90 bp | TGTGCTTTTGCTGTACAAGTCCAGGTTCTGGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAGAGATTCCTTCACCTGGGTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CAFAVQVQVLGGCLC*LPVTGERFLHLGEE Trigger: TTCCTCACCCAGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGGACTTGTACAGCAAAAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591597.5 |
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| CDS TCA 90 bp | GGGCAGGTATGTCTTCTCGTACAGGTTCTGGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAGAGATTCCTTCACCAAATCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: GQVCLLVQVLGGCLC*LPVTGERFLHQIPI Trigger: TATTGGGATTTGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAAGACATACCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592257.5 |
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| CDS-3UTR CAA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTTCTGGGCGGCTGTCTTaGCTGACTCCCAGTAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KNACVSAHGCCAFAVQVPSGRLS*LTPSNW Trigger: CCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGA...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
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| CDS-3UTR CAA 90 bp | GTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAATCTTGCTGGGGCTGTaGGGTCCCCTGGACCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSKNACVSAHGCCAFAVQILLGL*GPLDLK Trigger: TTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGAT...TTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CAA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTCAGAGACCTGGAACATaGAGGGGGTGTCATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KNACVSAHGCCAFAVQVPQRPGT*RGCHVA Trigger: TGCCACATGACACCCCCTCAATGTTCCAGGTCTCTG...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS-3UTR CAA 90 bp | TTAAATGTTGGCTGGACTGAGTCAGCCCCTCCATCTTGGCCCTTGAGTCCTCAGCAGCACAGAAAGAACTaGGTCAGTAAAAATGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LNVGWTESAPPSWPLSPQQHRKN*VSKNAC Trigger: ACAGGCATTTTTACTGACCAAGTTCTTTCTGTGCTG...CTGAGGACTCAAGGGCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CAA 90 bp | CTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTGGGGAGAAAGCACAGATGGCAGCACAGAAAGAACTaGGTCAGTAAAAATGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LMAAVLLLYKSLGRKHRWQHRKN*VSKNAC Trigger: ACAGGCATTTTTACTGACCAAGTTCTTTCTGTGCTG...CCATCTGTGCTTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS GCA 90 bp | AGAAAGAACTTGGTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTaGTGTGCTTTTGCTGTACAAGTCCAGGTTCTGGGCGGCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKNLVSKNACVSAHG*CAFAVQVQVLGGCL Trigger: AAGACAGCCGCCCAGAACCTGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGACCAAGTTCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591597.5 |
||
| CDS-3UTR CAA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTATGGCTGCTGTGCTTTaGCTGTACAAGTCCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KNACVSAHGCCAFAVQVPMAAVL*LYKSLS Trigger: ACTCAGGGACTTGTACAGCAAAAGCACAGCAGCCAT...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592257.5 |
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| CDS-3UTR CAA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGCTAGGCATCTCATCTaGCTGGGGCTGTTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWARHLI*LGLLGP Trigger: GGGACCCAACAGCCCCAGCAAGATGAGATGCCTAGC...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CAA 90 bp | GATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTTAGAGATCTTGCTGGGGCTGTaGGGTCCCCTGGACCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DYLLLLFTALFPWTHGLEILLGL*GPLDLK Trigger: TTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGAT...CTCTAACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CAA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGATCTTGCTGGGGCTGTaGGGTCCCCTGGACCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMILLGL*GPLDLK Trigger: TTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGAT...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CAA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGTCTGGGCGGCTGTCTTaGCTGACTCCCAGTAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMSGRLS*LTPSNW Trigger: CCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGA...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CAA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTTCTGGGCGGCTGTCTTaGCTGACTCCCAGTAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGSGRLS*LTPSNW Trigger: CCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGA...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS GCA 90 bp | AGAAAGAACTTGGTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTaGTGTGCTTTTGCTGTACAAGTCCCTGAGTTTCTCATCTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKNLVSKNACVSAHG*CAFAVQVPEFLIYS Trigger: GCTGTAGATGAGAAACTCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGACCAAGTTCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000252490.7 ENST00000590360.2 ENST00000592257.5 |
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| CDS-3UTR CAA 90 bp | AAAAATGCCTGTGTAAGTGCTCATGGCTGCTGTGCTTTTGCTGTACAAGTCCCTCAGCACAGAAAGAACTaGGTCAGTAAAAATGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KNACVSAHGCCAFAVQVPQHRKN*VSKNAC Trigger: ACAGGCATTTTTACTGACCAAGTTCTTTCTGTGCTG...AGGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000592257.5 |
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| CDS-3UTR CAA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGCCTCCATCTTGGCCCTaGAGTCCTCAGAAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMPPSWP*SPQKSS Trigger: ACTGCTTTTCTGAGGACTCAAGGGCCAAGATGGAGG...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CAA 90 bp | GCTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGATGGCTGCTGTGCTTTaGCTGTACAAGTCCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVTIIYCYYSLLYSHGPMMAAVL*LYKSLS Trigger: ACTCAGGGACTTGTACAGCAAAAGCACAGCAGCCAT...CATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS-3UTR CAA 90 bp | GTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGGTATGAGAGAGGCACTTTaGGTGACGAAGAACATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VTIIYCYYSLLYSHGPMGMREAL*VTKNMH Trigger: GTGCATGTTCTTCGTCACCAAAAGTGCCTCTCTCAT...ACCCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590360.2 |
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| CDS-3UTR CAA 90 bp | CTGTTACGATTATTTATTGTTACTATTCACTGCTTTATTCCCATGGACCCATGGCAGCACAGAAAGAACTaGGTCAGTAAAAATGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLRLFIVTIHCFIPMDPWQHRKN*VSKNAC Trigger: ACAGGCATTTTTACTGACCAAGTTCTTTCTGTGCTG...CCATGGGTCCATGGGAATAAAGCAGTGAATAGTAACAATAAATAATCGTAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000590360.2 |
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| CDS TCA 72 bp | AGACCTGGAACATTGAGGGGGTGTCATGTGGCAGGCTaGCTGGAGGCGGCTGTTCCTGTGGTCACGCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RPGTLRGCHVAG*LEAAVPVVTPH Trigger: GTGGGGCGTGACCACAGGAACAGCCGCCTCCAGTCAGCCTGCCACATGACACCCCCTCAATGTTCCAGGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585786.1 |
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| CDS GCA 72 bp | ACCTGGGTGAGGAAGGTCGGGCTAGGCATCTCATCTTaGTGGGGCTGTTGGGTCCCCTGGACCTCAAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: TWVRKVGLGISS*WGCWVPWTSNP Trigger: GGGATTTGAGGTCCAGGGGACCCAACAGCCCCAGCAAGATGAGATGCCTAGCCCGACCTTCCTCACCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000252490.7 ENST00000585786.1 ENST00000590360.2 ENST00000591597.5 |
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| CDS GCA 72 bp | CTCTGTGTGAGCTCGGTGTCCCAGTCAAGTTTCCCATaGATGGACTTGGACACAGCCCCCTTCTTGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LCVSSVSQSSFP*MDLDTAPFLGL Trigger: GAGGCCCAAGAAGGGGGCTGTGTCCAAGTCCATGCATGGGAAACTTGACTGGGACACCGAGCTCACACAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS TCA 72 bp | GGGCCAGACCCCATTTCTCCAGGGGCAGGTGCTACCTaGGTTTCTCATCTACAGCGGGCAGGTATGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPDPISPGAGAT*VSHLQRAGMSS Trigger: AGAAGACATACCTGCCCGCTGTAGATGAGAAACTCAGGTAGCACCTGCCCCTGGAGAAATGGGGTCTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS GCA 72 bp | GTGGTATGGGCCAGACCCCATTTCTCCAGGGGCAGGTaGTACCTGAGTTTCTCATCTACAGCGGGCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: VVWARPHFSRGR*YLSFSSTAGRY Trigger: ATACCTGCCCGCTGTAGATGAGAAACTCAGGTAGCACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585786.1 |
||
| CDS CAA 90 bp | CAGCGGGCAGGTATGTCTTCTCGTACAGGTTCTGGGCGGCTGTCTTaGCTGACTCCCAGTAACTGGAGAGAGATTCCTTCACCAAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRAGMSSRTGSGRLS*LTPSNWREIPSPNP Trigger: GGGATTTGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAAGACATACCTGCCCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592257.5 |
||
| CDS TCA 72 bp | GCTGTACAAGTCCAGGTTCTGGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAGAGATTCCTTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVQVQVLGGCLC*LPVTGERFLHL Trigger: CAGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGGACTTGTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591597.5 |
||
| CDS TCA 72 bp | TGTCTTCTCGTACAGGTTCTGGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAGAGATTCCTTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLLVQVLGGCLC*LPVTGERFLHL Trigger: CAGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000252490.7 ENST00000585786.1 ENST00000590360.2 |
||
| CDS CCA 72 bp | CTCAAATCCCAATACCAGGAGGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCATAGTGTCCAGAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: LKSQYQEDKKQS*EESCAHSVQRP Trigger: TGGTCTCTGGACACTATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTCCTCCTGGTATTGGGATTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252490.7 ENST00000591597.5 |
||
| CDS CCA 72 bp | CTCAAATCCCAATACCAGGAGGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCATAGTGTCCAGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: LKSQYQEDKKQS*EESCAHSVQRP Trigger: AGGTCTCTGGACACTATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTCCTCCTGGTATTGGGATTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585786.1 ENST00000590360.2 |
||
| CDS CCA 72 bp | ACCAAATCCCAATACCAGGAGGACAAGAAACAGAGCTaGGAGGAGTCGTGTGCCCATAGTGTCCAGAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: TKSQYQEDKKQS*EESCAHSVQRP Trigger: TGGTCTCTGGACACTATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTCCTCCTGGTATTGGGATTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592257.5 |
||
| CDS TCA 72 bp | TGTCTTCTCGTACAGGTTCTGGGCGGCTGTCTTTGCTaGCTCCCAGTAACTGGAGAGAGATTCCTTCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLLVQVLGGCLC*LPVTGERFLHQ Trigger: TTGGTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592257.5 |
||
| CDS CAA 72 bp | GGTATGTCTTCTCGTACAGGTTCTGGGCGGCTGTCTTaGCTGACTCCCAGTAACTGGAGAGAGATTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GMSSRTGSGRLS*LTPSNWREIPS Trigger: TGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAAGACATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252490.7 ENST00000585786.1 ENST00000590360.2 ENST00000592257.5 |
||
| CDS CAA 72 bp | TTTTGCTGTACAAGTCCAGGTTCTGGGCGGCTGTCTTaGCTGACTCCCAGTAACTGGAGAGAGATTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FCCTSPGSGRLS*LTPSNWREIPS Trigger: TGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGGACTTGTACAGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591597.5 |
||
| CDS GCA 72 bp | TTGGTCAGTAAAAATGCCTGTGTAAGTGCTCATGGCTaGTGTGCTTTTGCTGTACAAGTCCAGGTTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVSKNACVSAHG*CAFAVQVQVLG Trigger: GCCCAGAACCTGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591597.5 |
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