Pregenerated sensors for APOBEC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000173627Ensembl transcript IDs: ENST00000308641.6, ENST00000481562.1
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGCAGAAGGGAGAGGTCTaGGCTGGGGAAGATCAAACT | + |
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Preference number: 2 (lower is better) Translates to: AGFQLGWRRDAELQSLVKQKGEV*AGEDQT Trigger: AGTTTGATCTTCCCCAGCTCAGACCTCTCCCTTCTG...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGGGGAGAGACAGTGCTTaGCCTGTAGGTACTTATGAT | + |
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Preference number: 2 (lower is better) Translates to: AGFQLGWRRDAELQSLVKGRDSA*PVGTYD Trigger: ATCATAAGTACCTACAGGTCAAGCACTGTCTCTCCC...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR TCA 90 bp | GTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAGGGAGAGACAGTGCTTGACCTGATCTTGGCTCAGCCCTaGGAGAGAAAGTTTCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: VLDPKGKAKEKGETVLDLILAQP*ERKFPD Trigger: ATCTGGAAACTTTCTCTCTCAGGGCTGAGCCAAGAT...CAGGTCAAGCACTGTCTCTCCCTTCTCTTTAGCTTTTCCCTTAGGATCTAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR GCA 90 bp | GTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAGGGAGAGACAGTGCTTGACCTGCTTACCTCTATCATCTaGTCAGAAGGGAGAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: VLDPKGKAKEKGETVLDLLTSII*SEGRGL Trigger: CAGACCTCTCCCTTCTGAGCAGATGATAGAGGTAAG...CAGGTCAAGCACTGTCTCTCCCTTCTCTTTAGCTTTTCCCTTAGGATCTAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGAGTTTATCTCCATCTTaGCTCAGCCCTGAGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: AGFQLGWRRDAELQSLVKSLSPS*LSPERE Trigger: TTCTCTCTCAGGGCTGAGCCAAGATGGAGATAAACT...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGGATGACAGGAGCCATTaGAGGTTCTCATGTATCATC | + |
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Preference number: 2 (lower is better) Translates to: AGFQLGWRRDAELQSLVKDDRSH*RFSCII Trigger: GATGATACATGAGAACCTCCAATGGCTCCTGTCATC...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR CAA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATaGGTGAAGTTATTGAGATGTCATTTCAGCCTTGCTACTCACATT | + |
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Preference number: 2 (lower is better) Translates to: AGFQLGWRRDAELQS*VKLLRCHFSLATHI Trigger: AATGTGAGTAGCAAGGCTGAAATGACATCTCAATAACTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAAGTCCCTTGGTAATTaGTTTCATGCTGTAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: TGLLLQTALNVSSFRLFFKSLGN*FHAVGM Trigger: CATTCCTACAGCATGAAACCAATTACCAAGGGACTT...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR CAA 90 bp | TTGGTGAAGTTATTGAGATGTCATTTCAGCCTTGCTACTCACATTTaGCTGGGTAATGTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LVKLLRCHFSLATHI*LGNVLDPKGKAKEK Trigger: CTTCTCTTTAGCTTTTCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATGACATCTCAATAACTTCACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR TCA 72 bp | ATCTTACCTCTATCATCTGCTCAGAAGGGAGAGGTCTaGGCTGGGGAAGATCAAACTGAGCAGGTGGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: ILPLSSAQKGEV*AGEDQTEQVAR Trigger: CCTAGCCACCTGCTCAGTTTGATCTTCCCCAGCTCAGACCTCTCCCTTCTGAGCAGATGATAGAGGTAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR GCA 72 bp | TTGGAGGTTCTCATGTATCATCTTACCTCTATCATCTaGTCAGAAGGGAGAGGTCTGAGCTGGGGAAGATCA | + |
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Preference number: 3 (lower is better) Translates to: LEVLMYHLTSII*SEGRGLSWGRS Trigger: TGATCTTCCCCAGCTCAGACCTCTCCCTTCTGAGCAGATGATAGAGGTAAGATGATACATGAGAACCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGAGGAGAGAGATCAAGTaGCTTATGGAAACATTTTGG | + |
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Preference number: 3 (lower is better) Translates to: AGFQLGWRRDAELQSLVKRREIK*LMETFW Trigger: CCAAAATGTTTCCATAAGCAACTTGATCTCTCTCCT...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR CAA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAAGCCAGTAAGAGGAACTaGGATTTTATACAGTATGTG | + |
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Preference number: 3 (lower is better) Translates to: NTHYALGAALERGMDANKASKRN*DFIQYV Trigger: CACATACTGTATAAAATCCAAGTTCCTCTTACTGGC...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR CAA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTTATCTAATAAGTCCCTaGGTAATTGGTTTCATGCTG | + |
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Preference number: 3 (lower is better) Translates to: LLLQTALNVSSFRLFFNFYLISP*VIGFML Trigger: CAGCATGAAACCAATTACCAAGGGACTTATTAGATA...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| 3UTR-3UTR CAA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTGCTAATGGTTCCATTTaGATACTGCCACTTTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: LLLQTALNVSSFRLFFNFANGSI*ILPLSK Trigger: TTTTGAAAGTGGCAGTATCAAAATGGAACCATTAGC...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | GTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAGGGAGAGACAGTGCTTGACCTGTCTCTTGCAGGATGGTaGAGCAGGCTTTCAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VLDPKGKAKEKGETVLDLSLAGW*SRLSAG Trigger: CCCAGCTGAAAGCCTGCTTCACCATCCTGCAAGAGA...CAGGTCAAGCACTGTCTCTCCCTTCTCTTTAGCTTTTCCCTTAGGATCTAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGGGAGGTAGGTTGGGTTaGAGTTGTCCACTCGGCATT | + |
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Preference number: 4 (lower is better) Translates to: AGFQLGWRRDAELQSLVKGGRLG*SCPLGI Trigger: AATGCCGAGTGGACAACTCCAACCCAACCTACCTCC...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTCCCGCGGCCATAAGCTaGCCAGGCTCCGGAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LLLQTALNVSSFRLFFNFPAAIS*PGSGEL Trigger: AAGCTCTCCGGAGCCTGGCCAGCTTATGGCCGCGGG...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCTTCGCGGTTCCATGCTaGGGCAGGAAAGTCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFFAVPC*GRKVHL Trigger: GAGATGGACTTTCCTGCCTCAGCATGGAACCGCGAA...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGGGCATTGATTTCATATaGGTTGTGCCTGTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: AGFQLGWRRDAELQSLVKGIDFI*VVPVSQ Trigger: CTGGCTGACAGGCACAACGCATATGAAATCAATGCC...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGCTCTCTAAAGCCTCCTaGGCTTTTGTGTTTGGATTC | + |
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Preference number: 4 (lower is better) Translates to: AGFQLGWRRDAELQSLVKLSKAS*AFVFGF Trigger: GAATCCAAACACAAAAGCTCAGGAGGCTTTAGAGAG...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAGCCCTTGCTGAGGTGTaGCTACCTCTAAGAACACTG | + |
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Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGALAEV*LPLRTL Trigger: CAGTGTTCTTAGAGGTAGCCACACCTCAGCAAGGGC...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGACAAATATTCACTGGTaGCGAGGATGGAGTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: AGFQLGWRRDAELQSLVKTNIHW*RGWSQK Trigger: TTTCTGACTCCATCCTCGTCACCAGTGAATATTTGT...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGACTAGCATGGCCCTTTTaGACCAGGCTACCAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGLAWPF*TRLPEE Trigger: TTCTTCTGGTAGCCTGGTGCAAAAGGGCCATGCTAG...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | GTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAGGGAGAGACAGTGCTTGACCTGAGTTTATCTCCATCTTaGCTCAGCCCTGAGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VLDPKGKAKEKGETVLDLSLSPS*LSPERE Trigger: TTCTCTCTCAGGGCTGAGCCAAGATGGAGATAAACT...CAGGTCAAGCACTGTCTCTCCCTTCTCTTTAGCTTTTCCCTTAGGATCTAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGTCTGACAAAATTCTGTaGGGGAAACTCTTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: AGFQLGWRRDAELQSLVKSDKIL*GKLLLL Trigger: AAGAAGCAAGAGTTTCCCTCACAGAATTTTGTCAGA...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCTTGGTGGTAAGTCCCTaGGAGGCACTAGCACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFLVVSP*EALAQK Trigger: TTTTTGTGCTAGTGCCTCTCAGGGACTTACCACCAA...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAATTCCACTATCTCCACTaGCCTTCCAGTGGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: NTHYALGAALERGMDANKFHYLH*PSSGKP Trigger: AGGCTTCCCACTGGAAGGTCAGTGGAGATAGTGGAA...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAATTTCATATGCGTTGTaGCTGTCAGCCAGTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGISYAL*LSASAL Trigger: GAGAGCACTGGCTGACAGGCACAACGCATATGAAAT...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGACTTACCTCTATCATCTaGTCAGAAGGGAGAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGLTSII*SEGRGL Trigger: CAGACCTCTCCCTTCTGAGCAGATGATAGAGGTAAG...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTGGTCTGGAGGTAGGTTaGGTTGGAGTTGTCCACTCG | + |
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Preference number: 4 (lower is better) Translates to: LLLQTALNVSSFRLFFNFGLEVG*VGVVHS Trigger: CGAGTGGACAACTCCAACCCAACCTACCTCCAGACC...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGTTTACTATTGTTCCATaGTTTGCTAGGTACTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: AGFQLGWRRDAELQSLVKFTIVP*FARYSS Trigger: TGAGGAGTACCTAGCAAATCATGGAACAATAGTAAA...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCTGTCCACTCGGCATTTaGAAAAACTGTCCAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFCPLGI*KNCPGK Trigger: CTTTCCTGGACAGTTTTTTCAAATGCCGAGTGGACA...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGACTGTGGAGAACAGAATaGCAGATCCCACCACTTATT | + |
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Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGLWRTE*QIPPLI Trigger: AATAAGTGGTGGGATCTGGCATTCTGTTCTCCACAG...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAAGGGTTTTGGCCCATATaGATTGGTGGTAAGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NTHYALGAALERGMDANKGFWPI*IGGKSL Trigger: CAGGGACTTACCACCAATGCATATGGGCCAAAACCC...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | GTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAGGGAGAGACAGTGCTTGACCTGGGTACTCCTCATATATaGGCTCCATTGCTAGATTTA | + |
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Preference number: 4 (lower is better) Translates to: VLDPKGKAKEKGETVLDLGTPHI*APLLDL Trigger: TAAATCTAGCAATGGAGCCCATATATGAGGAGTACC...CAGGTCAAGCACTGTCTCTCCCTTCTCTTTAGCTTTTCCCTTAGGATCTAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGACTAAGAGTGATGCCTaGATACGTAATCAGGAAATT | + |
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Preference number: 4 (lower is better) Translates to: AGFQLGWRRDAELQSLVKTKSDA*IRNQEI Trigger: AATTTCCTGATTACGTATCCAGGCATCACTCTTAGT...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAAATCTTGGCTCAGCCCTaGGAGAGAAAGTTTCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: NTHYALGAALERGMDANKILAQP*ERKFPD Trigger: ATCTGGAAACTTTCTCTCTCAGGGCTGAGCCAAGAT...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCATGGAGAAGGGATGCTaGGTTACAATCATTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFMEKGC*VTIIGE Trigger: TTCACCAATGATTGTAACTCAGCATCCCTTCTCCAT...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGATGCCTCCTTGCTACTTaGAAACTGTTCTGTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGCLLAT*KLFCDF Trigger: GAAATCACAGAACAGTTTGCAAGTAGCAAGGAGGCA...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCTCACTGGTTTGCTCCTaGAAACAGCACTTAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFSLVCS*KQHLMS Trigger: TGACATTAAGTGCTGTTTGCAGGAGCAAACCAGTGA...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCATGTCATTTCAGCCTTaGTACTCACATTTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFMSFQP*YSHFAG Trigger: CCCAGCAAAATGTGAGTAGCAAGGCTGAAATGACAT...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGATTATGCATTGGGAGCTaGATTAGAAAGGGGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGLCIGS*IRKGNG Trigger: TCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAA...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCATTTGTCTCCAGGCTTaGATCACATTCCAGGTGTTA | + |
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Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFICLQA*ITFQVL Trigger: TAACACCTGGAATGTGATCCAAGCCTGGAGACAAAT...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTCGCCTGTTATGGCATTaGTTTCATATGCGTTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LLLQTALNVSSFRLFFNFRLLWH*FHMRCA Trigger: GGCACAACGCATATGAAATCAATGCCATAACAGGCG...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | TTCCAGATTTTTATTGCCTATCTAATAAGTCCCTTGGTAATTGGTTTCATGCTGCAGAAGGGAGAGGTCTaGGCTGGGGAAGATCAAACT | + |
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Preference number: 4 (lower is better) Translates to: FQIFIAYLISPLVIGFMLQKGEV*AGEDQT Trigger: AGTTTGATCTTCCCCAGCTCAGACCTCTCCCTTCTG...CAGCATGAAACCAATTACCAAGGGACTTATTAGATAGGCAATAAAAATCTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGACTTCTTCTTTTCATCTaGCTCCTTGCTACTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGLLLFI*LLATCK Trigger: TTTGCAAGTAGCAAGGAGGCAGATGAAAAGAAGAAG...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | TTCCAGATTTTTATTGCCTATCTAATAAGTCCCTTGGTAATTGGTTTCATGCTGGTGCAACTGCTAGCATaGCCCTTTTGCACCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FQIFIAYLISPLVIGFMLVQLLA*PFCTRL Trigger: TAGCCTGGTGCAAAAGGGCCATGCTAGCAGTTGCAC...CAGCATGAAACCAATTACCAAGGGACTTATTAGATAGGCAATAAAAATCTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAATTGCTGATGCAGCAGTaGTTAGCTTCATTACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTHYALGAALERGMDANKLLMQQ*LASLQG Trigger: CCCTTGTAATGAAGCTAACCACTGCTGCATCAGCAA...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCCTCTCCCAGTTAAAATaGGCTGAAAAACATGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFLSQLK*AEKHVI Trigger: GATCACATGTTTTTCAGCCCATTTTAACTGGGAGAG...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAAGCCTTCCAAGGTCCTTaGTTTCCTGGAATGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: NTHYALGAALERGMDANKAFQGP*FPGMTF Trigger: AAATGTCATTCCAGGAAACCAAGGACCTTGGAAGGC...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCGTCTATTCGTTCATTTaGACTTTGCTGTTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGLLLQTALNVSSFRLFFVYSFI*TLLFQV Trigger: AACTTGGAACAGCAAAGTTCAAATGAACGAATAGAC...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGATTACTGTCTTCTAGCTaGAAACCATCAATTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGLLSSS*KPSICL Trigger: GAGACAAATTGATGGTTTGCAGCTAGAAGACAGTAA...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR GCA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAATGTGAGGGAAACTCTTaGTTCTTCACCTGTTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTHYALGAALERGMDANKCEGNS*FFTCSN Trigger: ATTCGAACAGGTGAAGAAGCAAGAGTTTCCCTCACA...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | TTCCAGATTTTTATTGCCTATCTAATAAGTCCCTTGGTAATTGGTTTCATGCTGGATCCCACCACTTATTaGACTCAAAACAACCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FQIFIAYLISPLVIGFMLDPTTY*TQNNPR Trigger: CCGCGGGTTGTTTTGAGTCCAATAAGTGGTGGGATC...CAGCATGAAACCAATTACCAAGGGACTTATTAGATAGGCAATAAAAATCTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAACCACTTATAAAGCTGTaGAGAACAGAATGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NTHYALGAALERGMDANKPLIKL*RTECQI Trigger: GATCTGGCATTCTGTTCTCCACAGCTTTATAAGTGG...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGATTAATAGAAAATCACTaGTTTGCTCCTGCAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGLIENH*FAPANS Trigger: GCTGTTTGCAGGAGCAAACCAGTGATTTTCTATTAA...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR TCA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTCCAGTTAAAATGGGCTaGAAAACATGTGATCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQTALNVSSFRLFFNFPVKMG*KTCDPE Trigger: CTCAGGATCACATGTTTTTCAGCCCATTTTAACTGG...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR GCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAGAATACAGAATGATATaGCTGATGCTGTCATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGEYRMI*LMLSLL Trigger: CAATAATGACAGCATCAGGCATATCATTCTGTATTC...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAATCAAACTGAGCAGGTaGCTAGGTTTTAATCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HFSLATHILLGNVLDPKGIKLSR*LGFNLY Trigger: ATAAAGATTAAAACCTAGCCACCTGCTCAGTTTGAT...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| 3UTR CAA 72 bp | TTATTGAGATGTCATTTCAGCCTTGCTACTCACATTTaGCTGGGTAATGTGCTAGATCCTAAGGGAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCHFSLATHI*LGNVLDPKGKA Trigger: AGCTTTTCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATGACATCTCAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR GCA 90 bp | TTCCAGATTTTTATTGCCTATCTAATAAGTCCCTTGGTAATTGGTTTCATGCTGAGAAAATCACTGGTTTaGTCCTGCAAACAGCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: FQIFIAYLISPLVIGFMLRKSLV*SCKQHL Trigger: TAAGTGCTGTTTGCAGGAGCAAACCAGTGATTTTCT...CAGCATGAAACCAATTACCAAGGGACTTATTAGATAGGCAATAAAAATCTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | TTCCAGATTTTTATTGCCTATCTAATAAGTCCCTTGGTAATTGGTTTCATGCTGGGATTCCTTTTTGTCTaGAGAAGAACATCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQIFIAYLISPLVIGFMLGFLFV*RRTSVK Trigger: CTTCACTGATGTTCTTCTCCAGACAAAAAGGAATCC...CAGCATGAAACCAATTACCAAGGGACTTATTAGATAGGCAATAAAAATCTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CCA 90 bp | TTCCAGATTTTTATTGCCTATCTAATAAGTCCCTTGGTAATTGGTTTCATGCTGAAGTCCCTTGGTAATTaGTTTCATGCTGTAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FQIFIAYLISPLVIGFMLKSLGN*FHAVGM Trigger: CATTCCTACAGCATGAAACCAATTACCAAGGGACTT...CAGCATGAAACCAATTACCAAGGGACTTATTAGATAGGCAATAAAAATCTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR GCA 90 bp | TTCCAGATTTTTATTGCCTATCTAATAAGTCCCTTGGTAATTGGTTTCATGCTGGTAAAACACACATTATaGATTGGGAGCTGCATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FQIFIAYLISPLVIGFMLVKHTL*IGSCIR Trigger: TCTAATGCAGCTCCCAATGCATAATGTGTGTTTTAC...CAGCATGAAACCAATTACCAAGGGACTTATTAGATAGGCAATAAAAATCTGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 90 bp | AGATCCCACCACTTATTGGACTCAAAACAACCCGCGGCCATAAGCTaGCCAGGCTCCGGAGAGCTTCGCGGTTCCATGCTGAGGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSHHLLDSKQPAAIS*PGSGELRGSMLRQE Trigger: TTCCTGCCTCAGCATGGAACCGCGAAGCTCTCCGGAGCCTGGCCAGCTTATGGCCGCGGGTTGTTTTGAGTCCAATAAGTGGTGGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS TCA 90 bp | CTCCTTGCTACTTGCAAACTGTTCTGTGATTTCCACTATCTCCACTaGCCTTCCAGTGGGAAGCCTTCCAAGGTCCTTGGTTTCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLATCKLFCDFHYLH*PSSGKPSKVLGFLE Trigger: TTCCAGGAAACCAAGGACCTTGGAAGGCTTCCCACTGGAAGGTCAGTGGAGATAGTGGAAATCACAGAACAGTTTGCAAGTAGCAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCGCTAGCATGGCCCTTTaGCACCAGGCTACCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFASMAL*HQATRR Trigger: TCTTCTGGTAGCCTGGTGCAAAAGGGCCATGCTAGC...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAAGGTCTGGAGGTAGGTaGGGTTGGAGTTGTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: HFSLATHILLGNVLDPKGRSGGR*GWSCPL Trigger: GAGTGGACAACTCCAACCCAACCTACCTCCAGACCT...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS TCA 90 bp | CTCCTTGCTACTTGCAAACTGTTCTGTGATTTCCACTATCTCCACTaGCCTTCCAGTGGGAAGCCTTCCAAGGTCCTTGGTTTCCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLATCKLFCDFHYLH*PSSGKPSKVLGFHQ Trigger: TTGATGGAAACCAAGGACCTTGGAAGGCTTCCCACTGGAAGGTCAGTGGAGATAGTGGAAATCACAGAACAGTTTGCAAGTAGCAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481562.1 |
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| CDS-3UTR CAA 90 bp | GTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAGGGAGAGACAGTGCTTGACCTGCTGCAAACCATCAATTaGTCTCCAGGCTTGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLDPKGKAKEKGETVLDLLQTIN*SPGLDH Trigger: GTGATCCAAGCCTGGAGACAAATTGATGGTTTGCAG...CAGGTCAAGCACTGTCTCTCCCTTCTCTTTAGCTTTTCCCTTAGGATCTAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | GTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAGGGAGAGACAGTGCTTGACCTGAGCCTTCCAAGGTCCTaGGTTTCCTGGAATGACATT | + |
|
Preference number: 5 (lower is better) Translates to: VLDPKGKAKEKGETVLDLSLPRS*VSWNDI Trigger: AATGTCATTCCAGGAAACCAAGGACCTTGGAAGGCT...CAGGTCAAGCACTGTCTCTCCCTTCTCTTTAGCTTTTCCCTTAGGATCTAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAGATCCCACCACTTATaGGACTCAAAACAACCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFRSHHL*DSKQPA Trigger: CGCGGGTTGTTTTGAGTCCAATAAGTGGTGGGATCT...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGAACACACATTATGCATaGGGAGCTGCATTAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGFQLGWRRDAELQSLVKNTHYA*GAALER Trigger: CCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 90 bp | GGCATATTTAAGTGCCTTACGATATTCCTGGGTTTATTTGGGTTTTaGCCCATATGCATTGGTGGTAAGTCCCTGAGAGGCACTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GIFKCLTIFLGLFGF*PICIGGKSLRGTST Trigger: TGTGCTAGTGCCTCTCAGGGACTTACCACCAATGCATATGGGCCAAAACCCAAATAAACCCAGGAATATCGTAAGGCACTTAAATATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGGGACTCTTTCACAGTTaGTGTCTATTCGTTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGFQLGWRRDAELQSLVKGLFHS*CLFVHL Trigger: CAAATGAACGAATAGACACAAACTGTGAAAGAGTCC...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | GCAGGCTTTCAGCTGGGATGGAGAAGGGATGCTGAGTTACAATCATTGGTGAAGTTACAAGGGGAGTTGTaGGAATACAGAATGATATGC | + |
|
Preference number: 5 (lower is better) Translates to: AGFQLGWRRDAELQSLVKLQGEL*EYRMIC Trigger: GCATATCATTCTGTATTCCAACAACTCCCCTTGTAA...CTTCACCAATGATTGTAACTCAGCATCCCTTCTCCATCCCAGCTGAAAGCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAGGGTTTATTTGGGTTTaGGCCCATATGCATTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFSLATHILLGNVLDPKGGFIWV*AHMHWW Trigger: CCACCAATGCATATGGGCCAAAACCCAAATAAACCC...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | GTGCTAGATCCTAAGGGAAAAGCTAAAGAGAAGGGAGAGACAGTGCTTGACCTGTATTCCTGGGTTTATTaGGGTTTTGGCCCATATGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLDPKGKAKEKGETVLDLYSWVY*GFGPYA Trigger: TGCATATGGGCCAAAACCCAAATAAACCCAGGAATA...CAGGTCAAGCACTGTCTCTCCCTTCTCTTTAGCTTTTCCCTTAGGATCTAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS GCA 90 bp | AAGTGCCTTACGATATTCCTGGGTTTATTTGGGTTTTGGCCCATATaGATTGGTGGTAAGTCCCTGAGAGGCACTAGCACAAAAACAACA | + |
|
Preference number: 5 (lower is better) Translates to: KCLTIFLGLFGFWPI*IGGKSLRGTSTKTT Trigger: TGTTGTTTTTGTGCTAGTGCCTCTCAGGGACTTACCACCAATGCATATGGGCCAAAACCCAAATAAACCCAGGAATATCGTAAGGCACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAAATTTGTCTCCAGGCTaGGATCACATTCCAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HFSLATHILLGNVLDPKGNLSPG*DHIPGV Trigger: AACACCTGGAATGTGATCCAAGCCTGGAGACAAATT...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCACGCCTGTTATGGCATaGATTTCATATGCGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFTPVMA*ISYALC Trigger: GCACAACGCATATGAAATCAATGCCATAACAGGCGT...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAGATGTCATTTCAGCCTaGCTACTCACATTTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFSLATHILLGNVLDPKGDVISA*LLTFCW Trigger: CCAGCAAAATGTGAGTAGCAAGGCTGAAATGACATC...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAAGCCTCCTGAGCTTTaGTGTTTGGATTCCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFKPPEL*CLDSFL Trigger: CAAAAAGGAATCCAAACACAAAAGCTCAGGAGGCTT...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCCATATATGGGCTCCATaGCTAGATTTACTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFHIWAP*LDLLSS Trigger: AGAAGACAGTAAATCTAGCAATGGAGCCCATATATG...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCTGTGAGGTGTTTTGTTaGAGGAAATGTTGTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFCEVFC*RKCCPI Trigger: TATGGGACAACATTTCCTCAAACAAAACACCTCACA...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCCTGATGCTGTCATTATaGTATATGGCTGAGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFLMLSL*YMAESR Trigger: TCTTGACTCAGCCATATACAATAATGACAGCATCAG...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTTTGATTTCATATGCGTaGTGCCTGTCAGCCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLQTALNVSSFRLFFNFLISYA*CLSASA Trigger: AGCACTGGCTGACAGGCACAACGCATATGAAATCAA...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGAAGGAGAGAGATCAAGTaGCTTATGGAAACATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFSLATHILLGNVLDPKGRREIK*LMETFW Trigger: CCAAAATGTTTCCATAAGCAACTTGATCTCTCTCCT...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | CATTTCAGCCTTGCTACTCACATTTTGCTGGGTAATGTGCTAGATCCTAAGGGATGTCTATTCGTTCATTaGAACTTTGCTGTTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HFSLATHILLGNVLDPKGCLFVH*NFAVPS Trigger: ACTTGGAACAGCAAAGTTCAAATGAACGAATAGACA...TCCCTTAGGATCTAGCACATTACCCAGCAAAATGTGAGTAGCAAGGCTGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCCTATTGTTCCATGATTaGCTAGGTACTCCTCATATA | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFLLFHD*LGTPHI Trigger: TATATGAGGAGTACCTAGCAAATCATGGAACAATAG...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | ACTGGTTTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCTATCTAATAAGTCCCTaGGTAATTGGTTTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLLQTALNVSSFRLFFYLISP*VIGFML Trigger: CAGCATGAAACCAATTACCAAGGGACTTATTAGATA...GAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAAACCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
||
| CDS-3UTR CAA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTCCTGAGCTTTTGTGTTaGGATTCCTTTTTGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLQTALNVSSFRLFFNFPELLC*DSFLSG Trigger: TCCAGACAAAAAGGAATCCAAACACAAAAGCTCAGG...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTTTTTCATCTGCCTCCTaGCTACTTGCAAACTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LLLQTALNVSSFRLFFNFFSSAS*LLANCS Trigger: AGAACAGTTTGCAAGTAGCAAGGAGGCAGATGAAAA...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 40% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 90 bp | ATGGTTTTACTATTGTTCCATGATTTGCTAGGTACTCCTCATATATaGGCTCCATTGCTAGATTTACTGTCTTCTAGCTGCAAACCATCA | + |
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Preference number: 5 (lower is better) Translates to: MVLLLFHDLLGTPHI*APLLDLLSSSCKPS Trigger: TGATGGTTTGCAGCTAGAAGACAGTAAATCTAGCAATGGAGCCCATATATGAGGAGTACCTAGCAAATCATGGAACAATAGTAAAACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | AACACACATTATGCATTGGGAGCTGCATTAGAAAGGGGAATGGATGCTAACAAAGCTAATGGTTCCATTTaGATACTGCCACTTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: NTHYALGAALERGMDANKANGSI*ILPLSK Trigger: TTTTGAAAGTGGCAGTATCAAAATGGAACCATTAGC...TTTGTTAGCATCCATTCCCCTTTCTAATGCAGCTCCCAATGCATAATGTGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTGCCAGTAAGAGGAACTaGGATTTTATACAGTATGTG | + |
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Preference number: 5 (lower is better) Translates to: LLLQTALNVSSFRLFFNFASKRN*DFIQYV Trigger: CACATACTGTATAAAATCCAAGTTCCTCTTACTGGC...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | TTCCAGATTTTTATTGCCTATCTAATAAGTCCCTTGGTAATTGGTTTCATGCTGAGCTTCAGAAGGCAATaGTGCTGTAAAGATTCACCT | + |
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Preference number: 5 (lower is better) Translates to: FQIFIAYLISPLVIGFMLSFRRQ*CCKDSP Trigger: AGGTGAATCTTTACAGCACAATTGCCTTCTGAAGCT...CAGCATGAAACCAATTACCAAGGGACTTATTAGATAGGCAATAAAAATCTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTTCATTACAAGGGGAGTaGTTGGAATACAGAATGATA | + |
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Preference number: 5 (lower is better) Translates to: LLLQTALNVSSFRLFFNFSLQGE*LEYRMI Trigger: TATCATTCTGTATTCCAACAACTCCCCTTGTAATGA...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS-3UTR CAA 90 bp | TTGCTCCTGCAAACAGCACTTAATGTCAGTAGCTTCAGGCTGTTTTTCAATTTTAGGAAATTATACATTTaGCTGATGCAGCAGTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: LLLQTALNVSSFRLFFNFRKLYI*LMQQWL Trigger: TAACCACTGCTGCATCAGCAAAATGTATAATTTCCT...AAAATTGAAAAACAGCCTGAAGCTACTGACATTAAGTGCTGTTTGCAGGAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 90 bp | CTCAGTATGATAGAGCTGAGAAAAATAAATACTAAGAGTGATGCCTaGATACGTAATCAGGAAATTATACATTTTGCTGATGCAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LSMIELRKINTKSDA*IRNQEIIHFADAAV Trigger: CACTGCTGCATCAGCAAAATGTATAATTTCCTGATTACGTATCCAGGCATCACTCTTAGTATTTATTTTTCTCAGCTCTATCATACTGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS TCA 72 bp | GCTGGCCAGGCTCCGGAGAGCTTCGCGGTTCCATGCTaGGGCAGGAAAGTCCATCTCAGTATGATAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AGQAPESFAVPC*GRKVHLSMIEL Trigger: CAGCTCTATCATACTGAGATGGACTTTCCTGCCTCAGCATGGAACCGCGAAGCTCTCCGGAGCCTGGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 72 bp | CACTTATTGGACTCAAAACAACCCGCGGCCATAAGCTaGCCAGGCTCCGGAGAGCTTCGCGGTTCCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: HLLDSKQPAAIS*PGSGELRGSML Trigger: CAGCATGGAACCGCGAAGCTCTCCGGAGCCTGGCCAGCTTATGGCCGCGGGTTGTTTTGAGTCCAATAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 72 bp | AGCTGTGGAGAACAGAATGCCAGATCCCACCACTTATaGGACTCAAAACAACCCGCGGCCATAAGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SCGEQNARSHHL*DSKQPAAISWP Trigger: TGGCCAGCTTATGGCCGCGGGTTGTTTTGAGTCCAATAAGTGGTGGGATCTGGCATTCTGTTCTCCACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS TCA 72 bp | GGAGGTAGGTTGGGTTGGAGTTGTCCACTCGGCATTTaGAAAAACTGTCCAGGAAAGGCATTGTTTAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: GGRLGWSCPLGI*KNCPGKALFKG Trigger: CCCCTTAAACAATGCCTTTCCTGGACAGTTTTTTCAAATGCCGAGTGGACAACTCCAACCCAACCTACCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS GCA 72 bp | ACGATATTCCTGGGTTTATTTGGGTTTTGGCCCATATaGATTGGTGGTAAGTCCCTGAGAGGCACTAGCACA | + |
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Preference number: 6 (lower is better) Translates to: TIFLGLFGFWPI*IGGKSLRGTST Trigger: TGTGCTAGTGCCTCTCAGGGACTTACCACCAATGCATATGGGCCAAAACCCAAATAAACCCAGGAATATCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 72 bp | CAAGGTCCTTGGTTTCCATCAATTTGTCTCCAGGCTTaGATCACATTCCAGGTGTTAGAAGAGATGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: QGPWFPSICLQA*ITFQVLEEMVH Trigger: ATGGACCATCTCTTCTAACACCTGGAATGTGATCCAAGCCTGGAGACAAATTGATGGAAACCAAGGACCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481562.1 |
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| CDS CAA 72 bp | GTCCCATGCCCTGTTTCAAGTAGCTTCAGAAGGCAATaGTGCTGTAAAGATTCACCTTGTAATGGGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VPCPVSSSFRRQ*CCKDSPCNGFR Trigger: CCTGAACCCATTACAAGGTGAATCTTTACAGCACAATTGCCTTCTGAAGCTACTTGAAACAGGGCATGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308641.6 ENST00000481562.1 |
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| CDS CAA 72 bp | GGTTTTACGCCTGTTATGGCATTGATTTCATATGCGTaGTGCCTGTCAGCCAGTGCTCTCCCAGTTAAAATG | + |
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Preference number: 6 (lower is better) Translates to: GFTPVMALISYA*CLSASALPVKM Trigger: CATTTTAACTGGGAGAGCACTGGCTGACAGGCACAACGCATATGAAATCAATGCCATAACAGGCGTAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 72 bp | TCTTCTAGCTGCAAACCATCAATTTGTCTCCAGGCTTaGATCACATTCCAGGTGTTAGAAGAGATGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SSSCKPSICLQA*ITFQVLEEMVH Trigger: ATGGACCATCTCTTCTAACACCTGGAATGTGATCCAAGCCTGGAGACAAATTGATGGTTTGCAGCTAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 72 bp | CTGATGCAGCAGTGGTTAGCTTCATTACAAGGGGAGTaGTTGGAATACAGAATGATATGCCTGATGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LMQQWLASLQGE*LEYRMICLMLS Trigger: TGACAGCATCAGGCATATCATTCTGTATTCCAACAACTCCCCTTGTAATGAAGCTAACCACTGCTGCATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 72 bp | AAAACATGTGATCCTGAGACACCACTTATAAAGCTGTaGAGAACAGAATGCCAGATCCCACCACTTATTGGA | + |
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Preference number: 6 (lower is better) Translates to: KTCDPETPLIKL*RTECQIPPLIG Trigger: TCCAATAAGTGGTGGGATCTGGCATTCTGTTCTCCACAGCTTTATAAGTGGTGTCTCAGGATCACATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 72 bp | GCATATTTAAGTGCCTTACGATATTCCTGGGTTTATTaGGGTTTTGGCCCATATGCATTGGTGGTAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: AYLSALRYSWVY*GFGPYALVVSP Trigger: GGGACTTACCACCAATGCATATGGGCCAAAACCCAAATAAACCCAGGAATATCGTAAGGCACTTAAATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CCA 72 bp | CTATTGTTCCATGATTTGCTAGGTACTCCTCATATATaGGCTCCATTGCTAGATTTACTGTCTTCTAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLFHDLLGTPHI*APLLDLLSSSC Trigger: GCAGCTAGAAGACAGTAAATCTAGCAATGGAGCCCATATATGAGGAGTACCTAGCAAATCATGGAACAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 72 bp | GTGATGCCTGGATACGTAATCAGGAAATTATACATTTaGCTGATGCAGCAGTGGTTAGCTTCATTACAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VMPGYVIRKLYI*LMQQWLASLQG Trigger: CCCTTGTAATGAAGCTAACCACTGCTGCATCAGCAAAATGTATAATTTCCTGATTACGTATCCAGGCATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 90 bp | CTATTGTTCCATGATTTGCTAGGTACTCCTCATATATGGGCTCCATaGCTAGATTTACTGTCTTCTAGCTGCAAACCATCAATTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LLFHDLLGTPHIWAP*LDLLSSSCKPSICL Trigger: GAGACAAATTGATGGTTTGCAGCTAGAAGACAGTAAATCTAGCAATGGAGCCCATATATGAGGAGTACCTAGCAAATCATGGAACAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 90 bp | ATACTAAGAGTGATGCCTGGATACGTAATCAGGAAATTATACATTTaGCTGATGCAGCAGTGGTTAGCTTCATTACAAGGGGAGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ILRVMPGYVIRKLYI*LMQQWLASLQGELL Trigger: CAACAACTCCCCTTGTAATGAAGCTAACCACTGCTGCATCAGCAAAATGTATAATTTCCTGATTACGTATCCAGGCATCACTCTTAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 72 bp | TGGCTGAGTCAAGATAACCATTCATTTCAAAGAGCATaGATTCTGGATGGATATAATTCCCAGTGCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: WLSQDNHSFQRA*ILDGYNSQCNC Trigger: GCAGTTGCACTGGGAATTATATCCATCCAGAATCAATGCTCTTTGAAATGAATGGTTATCTTGACTCAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 90 bp | GAGAGAAGCTTAGCCAGTAATATGGTTTTACTATTGTTCCATGATTaGCTAGGTACTCCTCATATATGGGCTCCATTGCTAGATTTACTG | + |
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Preference number: 6 (lower is better) Translates to: ERSLASNMVLLLFHD*LGTPHIWAPLLDLL Trigger: CAGTAAATCTAGCAATGGAGCCCATATATGAGGAGTACCTAGCAAATCATGGAACAATAGTAAAACCATATTACTGGCTAAGCTTCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 90 bp | ATTTTGCTGATGCAGCAGTGGTTAGCTTCATTACAAGGGGAGTTGTaGGAATACAGAATGATATGCCTGATGCTGTCATTATTGTATATG | + |
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Preference number: 6 (lower is better) Translates to: ILLMQQWLASLQGEL*EYRMICLMLSLLYM Trigger: CATATACAATAATGACAGCATCAGGCATATCATTCTGTATTCCAACAACTCCCCTTGTAATGAAGCTAACCACTGCTGCATCAGCAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 90 bp | TACATTTTGCTGATGCAGCAGTGGTTAGCTTCATTACAAGGGGAGTaGTTGGAATACAGAATGATATGCCTGATGCTGTCATTATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: YILLMQQWLASLQGE*LEYRMICLMLSLLY Trigger: ATACAATAATGACAGCATCAGGCATATCATTCTGTATTCCAACAACTCCCCTTGTAATGAAGCTAACCACTGCTGCATCAGCAAAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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| CDS CAA 90 bp | AGATTTTATTTCTTCCCTTTCTTCTTCTTCTTTTCATCTGCCTCCTaGCTACTTGCAAACTGTTCTGTGATTTCCACTATCTCCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: RFYFFPFFFFFSSAS*LLANCSVISTISTD Trigger: GTCAGTGGAGATAGTGGAAATCACAGAACAGTTTGCAAGTAGCAAGGAGGCAGATGAAAAGAAGAAGAAGAAAGGGAAGAAATAAAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308641.6 ENST00000481562.1 |
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| CDS CAA 72 bp | ATTCACCTTGTAATGGGTTCAGGACTCTTTCACAGTTaGTGTCTATTCGTTCATTTGAACTTTGCTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: IHLVMGSGLFHS*CLFVHLNFAVP Trigger: TGGAACAGCAAAGTTCAAATGAACGAATAGACACAAACTGTGAAAGAGTCCTGAACCCATTACAAGGTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308641.6 ENST00000481562.1 |
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| CDS CAA 72 bp | CGAGAGAGAAGCTTAGCCAGTAATATGGTTTTACTATaGTTCCATGATTTGCTAGGTACTCCTCATATATGG | + |
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Preference number: 6 (lower is better) Translates to: RERSLASNMVLL*FHDLLGTPHIW Trigger: CCATATATGAGGAGTACCTAGCAAATCATGGAACAATAGTAAAACCATATTACTGGCTAAGCTTCTCTCTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308641.6 |
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