Pregenerated sensors for APOBEC3F (Homo sapiens)
Ensembl gene IDs: ENSG00000128394Ensembl transcript IDs: ENST00000308521.10, ENST00000381565.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTCATAGAGGAAAGGCCACAGAGGACACAGCCAGAAGGGATCCCTaGCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACC | + |
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Preference number: 1 (lower is better) Translates to: VHRGKATEDTARRDP*HPGGAASEQTTPPT Trigger: GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGTCCTCTGTGGCCTTTCCTCTATGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR GCA 90 bp | GCATCAGTGGTGGGGGCTAGCAGAACAGACCAGAAAGTTTCACAATaGTTCCTCATACAATGTCTGGAATCTTTAGATAAAACAAGCGGT | + |
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Preference number: 1 (lower is better) Translates to: ASVVGASRTDQKVSQ*FLIQCLESLDKTSG Trigger: ACCGCTTGTTTTATCTAAAGATTCCAGACATTGTATGAGGAAGCATTGTGAAACTTTCTGGTCTGTTCTGCTAGCCCCCACCACTGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CCA 90 bp | TATAGCAAGGAGTCCAAGACTTACAGCCATTTATTGCAGAAGCTATaGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: YSKESKTYSHLLQKL*IKLVSGYNAQFQES Trigger: TGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGGCTGTAAGTCTTGGACTCCTTGCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCGCAGTGAACCCAGATTaGACCACTGCACCCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RDPCHPGGAASEQTTPPTAVNPD*TTAPQP Trigger: AGGCTGGGGTGCAGTGGTGCAATCTGGGTTCACTGC...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCAATAAGATTTGGTTGTaGCGCCGGGCCAGTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RDPCHPGGAASEQTTPPTNKIWL*RRASGS Trigger: TGAGCCACTGGCCCGGCGGCACAACCAAATCTTATT...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCAGCTTCAACTACAGGTaGATGCCACCACACCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: RDPCHPGGAASEQTTPPTSFNYR*MPPHLF Trigger: AAACAGGTGTGGTGGCATGCACCTGTAGTTGAAGCT...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCGGTTTCAGGGTACAATaGACAGTTTCAGGAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RDPCHPGGAASEQTTPPTGFRVQ*TVSGVR Trigger: CCTGACTCCTGAAACTGTGCATTGTACCCTGAAACC...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCGAAAGAATTGTAATTTaGGACATACACGCAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: RDPCHPGGAASEQTTPPTERIVI*DIHAVR Trigger: CCGGACTGCGTGTATGTCCCAAATTACAATTCTTTC...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR TCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAAGCACTCCAGTCTGGGTaGCAGAGCGAAATTCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: TTPPTPPPWTCSLHICEKALQSG*QSEIPS Trigger: AGACGGAATTTCGCTCTGTCACCCAGACTGGAGTGC...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAAAGGGTCTCGATCTGTTaGTCAGACTGGAGTTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: TQPEGIPAIQEERPQSKQRVSIC*SDWSSV Trigger: CACTGAACTCCAGTCTGAGCAACAGATCGAGACCCT...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTTGGGAGAACAGAGACGGTGTGTGGCCTGACTaGTTTTCCTCCCTGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FGTYTQSGWCSPCWENRDGVWPD*FSSLAP Trigger: AGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACACC...GTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAAGAGTTTAATAAGATTTaGTTGTGCCGCCGGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TQPEGIPAIQEERPQSKQEFNKI*LCRRAS Trigger: ACTGGCCCGGCGGCACAACCAAATCTTATTAAACTC...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTTGGGAGAACAGAGACGGGAGCAATGGTGTGTaGCCTGACTGCTTTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: FGTYTQSGWCSPCWENRDGSNGV*PDCFSS Trigger: GGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCC...GTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCGATAGGCGGATCACCTaGGGTCAGGAGTTCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: FQESGLQRSPFWEQWCVADRRIT*GQEFKT Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCCGCCTATC...GGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAACCAAGATCAAGCCATTaGACTCCAGTCTGGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: TTPPTPPPWTCSLHICEKPRSSH*TPVWVT Trigger: TGTCACCCAGACTGGAGTGCAATGGCTTGATCTTGG...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAAACTGCTTTTCCTCCCTaGCTCCTGGGCTCTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: TTPPTPPPWTCSLHICEKTAFPP*LLGSVL Trigger: TAAAACAGAGCCCAGGAGCCAGGGAGGAAAAGCAGT...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAAAAAATTAGCCTGGTTTaGTGGTGGACGCCTGTAATC | + |
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Preference number: 2 (lower is better) Translates to: TQPEGIPAIQEERPQSKQKISLV*WWTPVI Trigger: GATTACAGGCGTCCACCACCAAACCAGGCTAATTTT...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CAA 90 bp | GTACAATGCACAGTTTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTaGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VQCTVSGVRLAEKSI*GAMVCGLTAFPPWL Trigger: GAGCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAACTGTGCATTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAGGAGAAATGTTCTCTTGTCCTATGGGAAAGCCCATGGGCACTAGGAAGGTGATCTCAGTTCACTaGAGCCTCCACCTCCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: RKGEMFSCPMGKPMGTRKVISVH*SLHLPG Trigger: GCCGGGGAGGTGGAGGCTGCAGTGAACTGAGATCAC...CTTCCTAGTGCCCATGGGCTTTCCCATAGGACAAGAGAACATTTCTCCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAATTCAGGAGTCAGGCTTaGAGAGAAGTCCATTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: TTPPTPPPWTCSLHICEKFRSQA*REVHFG Trigger: CCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAA...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGAAAATAAATGCCTGCCTGTGGCCCGCATTATTCATGTGGGCACCTGGCAGGCAGAGTTTGCAGTaGGCCAAGATCAAGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: CEKINACLWPALFMWAPGRQSLQ*AKIKPL Trigger: CAATGGCTTGATCTTGGCTCACTGCAAACTCTGCCT...GCCAGGTGCCCACATGAATAATGCGGGCCACAGGCAGGCATTTATTTTCTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGCTGGTAGGCAGAGTTTaGAGTGAGCCAAGATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: REVHFGSNGVWPDCFSSLLVGRV*SEPRSS Trigger: GCTTGATCTTGGCTCACTGCAAACTCTGCCTACCAG...CAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | GCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCCTCTGCCTCCCAAATTaGTGGGGGATTATAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: ACREVHFGSNGVWPDCFSLCLPN*WGIIGM Trigger: CATGCCTATAATCCCCCAGCAATTTGGGAGGCAGAG...GGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGGAGAAATGTTCTCTTGTCCTATGGGAAAGCCCATGGGCACTAGGAAGTCATGTGGCCCAGGCTaGTCTCGAATTCCTGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: RKGEMFSCPMGKPMGTRKSCGPG*SRIPGL Trigger: GAGCCCAGGAATTCGAGACCAGCCTGGGCCACATGA...CTTCCTAGTGCCCATGGGCTTTCCCATAGGACAAGAGAACATTTCTCCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTCAATGGTGTGTGGCCTaGCTGCTTTTCCTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGQWCVA*LLFLPG Trigger: GCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTG...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGGAGAAATGTTCTCTTGTCCTATGGGAAAGCCCATGGGCACTAGGAAGCTGGTCTCGAATTCCTaGGCTCAAGCGATTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: RKGEMFSCPMGKPMGTRKLVSNS*AQAILS Trigger: TGAGAGAATCGCTTGAGCCCAGGAATTCGAGACCAG...CTTCCTAGTGCCCATGGGCTTTCCCATAGGACAAGAGAACATTTCTCCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTGCCTAGAAAATGTCAAGTCAAATTTAAAGTGTGGAGAAGGGCCTCTAAATCCGAGACCGCACCATTaGACTCCAGCCTGGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: ICLENVKSNLKCGEGPLNPRPHH*TPAWVT Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGCGGTCTCGG...ATTTAGAGGCCCTTCTCCACACTTTAAATTTGACTTGACATTTTCTAGGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAAGTCAAATTTAAAGTGTaGAGAAGGGCCTCTAAATTT | + |
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Preference number: 2 (lower is better) Translates to: TTPPTPPPWTCSLHICEKVKFKV*RRASKF Trigger: AAATTTAGAGGCCCTTCTCCACACTTTAAATTTGAC...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CAA 90 bp | ATTGTAATTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTaGGGAGAACAGAGACAGCAACAGGTCCTATTAAAAGGAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: IVIWDIHAVRVVFTM*GEQRQQQVLLKGEM Trigger: CATTTCTCCTTTTAATAGGACCTGTTGCTGTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAATTACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTGGTAGGAAAATAGCTTaGACTCAGGCGGCAGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGGRKIA*TQAAEA Trigger: AGCCTCTGCCGCCTGAGTTCAAGCTATTTTCCTACC...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CAA 90 bp | CATACATTTCTGTTTATTGTAAATGTCCCCATCTCAGTCCTGCTGTaGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCG | + |
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Preference number: 2 (lower is better) Translates to: HTFLFIVNVPISVLL*KHHHKVHQDMSFPS Trigger: CGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAGCAGGACTGAGATGGGGACATTTACAATAAACAGAAATGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTTGTTCTCTTGTCCTATaGGAAAGCCCATGGGCACTA | + |
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Preference number: 2 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGCSLVL*ESPWAL Trigger: TAGTGCCCATGGGCTTTCCCATAGGACAAGAGAACA...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CAA 90 bp | AATAGCTGCGATTATAGCAAGGAGTCCAAGACTTACAGCCATTTATaGCAGAAGCTATGGATAAAGCTGGTTTCAGGGTACAATGCACAG | + |
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Preference number: 2 (lower is better) Translates to: NSCDYSKESKTYSHL*QKLWIKLVSGYNAQ Trigger: CTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGGCTGTAAGTCTTGGACTCCTTGCTATAATCGCAGCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR GCA 72 bp | GGAAAGGCCACAGAGGACACAGCCAGAAGGGATCCCTaGCATCCAGGAGGAGCGGCCTCAGAGCAAACAACC | + |
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Preference number: 3 (lower is better) Translates to: GKATEDTARRDP*HPGGAASEQTT Trigger: GGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGTCCTCTGTGGCCTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTTGGGAGAACAGAGACTGCAGTGAACCCAGATaGCACCACTGCACCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: FGTYTQSGWCSPCWENRDCSEPR*HHCTPA Trigger: GGCTGGGGTGCAGTGGTGCAATCTGGGTTCACTGCA...GTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CCA 72 bp | GCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTaGCCTGACTGCTTTTCCTCCCTGGCTCCTGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: ACREVHFGSNGV*PDCFSSLAPGL Trigger: GAGCCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CCA 72 bp | AGCCTCCATATCTGTGAGAAAATAAATGCCTGCCTGTaGCCCGCATTATTCATGTGGGCACCTGGCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SLHICEKINACL*PALFMWAPGPG Trigger: CCCTGGGCCAGGTGCCCACATGAATAATGCGGGCCACAGGCAGGCATTTATTTTCTCACAGATATGGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGAGAAAATAAATGCCTGCCTGTGGCCCGCATTATTCATGTGGGCACCTGGCTTTAATAAGATTTGGTaGTGCCGCCGGGCCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: CEKINACLWPALFMWAPGFNKIW*CRRASG Trigger: GCCACTGGCCCGGCGGCACAACCAAATCTTATTAAA...GCCAGGTGCCCACATGAATAATGCGGGCCACAGGCAGGCATTTATTTTCTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCCAGGGTCTCGATCTGTaGCTCAGACTGGAGTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: FQESGLQRSPFWEQWCVAQGLDL*LRLEFS Trigger: ACTGAACTCCAGTCTGAGCAACAGATCGAGACCCTG...GGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CCA 72 bp | AAGGAGAAATGTTCTCTTGTCCTATGGGAAAGCCCATaGGCACTAGGAAGGGTTGGGAACTGGGAGGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: KEKCSLVLWESP*ALGRVGNWEVP Trigger: TGGAACCTCCCAGTTCCCAACCCTTCCTAGTGCCCATGGGCTTTCCCATAGGACAAGAGAACATTTCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR-3UTR CAA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCAGCCAAGATCAAGCCATaGCACTCCAGTCTGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: MDKAGFRVQCTVSGVRLAAKIKP*HSSLGD Trigger: GTCACCCAGACTGGAGTGCAATGGCTTGATCTTGGC...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR GCA 72 bp | TTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTaGAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: FQGTMHSFRSQA*REVHFGSNGVW Trigger: CCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CCA 72 bp | GAGTCCAAGACTTACAGCCATTTATTGCAGAAGCTATaGATAAAGCTGGTTTCAGGGTACAATGCACAGTTT | + |
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Preference number: 3 (lower is better) Translates to: ESKTYSHLLQKL*IKLVSGYNAQF Trigger: AAACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGGCTGTAAGTCTTGGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCGTGATCTCAGTTCACTaGAGCCTCCACCTCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RDPCHPGGAASEQTTPPTVISVH*SLHLPG Trigger: GCCGGGGAGGTGGAGGCTGCAGTGAACTGAGATCAC...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCCCCGCATTATTCATGTaGGCACCTGGCCCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RDPCHPGGAASEQTTPPTPALFM*APGPGH Trigger: ATGCCCTGGGCCAGGTGCCCACATGAATAATGCGGG...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCGGTGGGAGAATTGCTTaGACCCAGCAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: RDPCHPGGAASEQTTPPTGGRIA*TQQAEV Trigger: AACCTCTGCCTGCTGGGTTCAAGCAATTCTCCCACC...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCCCAAGATCAAGCCATTaGACTCCAGTCTGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: RDPCHPGGAASEQTTPPTPRSSH*TPVWVT Trigger: TGTCACCCAGACTGGAGTGCAATGGCTTGATCTTGG...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCGAGACCGCACCATTaGACTCCAGCCTGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TQPEGIPAIQEERPQSKQPRPHH*TPAWVT Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGCGGTCTCGG...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | AGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAACCCCGCCGACCTGGTGTTCACCATGTTaGGAGAACAGAGACAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RDPCHPGGAASEQTTPPTWCSPC*ENRDSN Trigger: GTTGCTGTCTCTGTTCTCCCAACATGGTGAACACCA...GGTCGGCGGGGTTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAAGGAGGCCGAGACGGGTaGATCACGAGGTCAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTPPTPPPWTCSLHICEKGGRDG*ITRSGV Trigger: AACTCCTGACCTCGTGATCCACCCGTCTCGGCCTCC...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAAGGTCAGGTCAGGAGTTaGTCTTTAACTACCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQPEGIPAIQEERPQSKQGQVRS*SLTTRP Trigger: GGGCCTGGTAGTTAAAGATCAACTCCTGACCTGACC...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | TTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTTGGGAGAACAGAGACTCATGTGGCCCAGGCTaGTCTCGAATTCCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FGTYTQSGWCSPCWENRDSCGPG*SRIPGL Trigger: GAGCCCAGGAATTCGAGACCAGCCTGGGCCACATGA...GTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAAGGGAGCAATGGTGTGTaGCCTGACTGCTTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTPPTPPPWTCSLHICEKGSNGV*PDCFSS Trigger: GGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCC...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAAAATAAGATTTGGTTGTaGCGCCGGGCCAGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTPPTPPPWTCSLHICEKNKIWL*RRASGS Trigger: TGAGCCACTGGCCCGGCGGCACAACCAAATCTTATT...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | GCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCGGTGTGTGGCCTGACTaGTTTTCCTCCCTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ACREVHFGSNGVWPDCFSGVWPD*FSSLAP Trigger: AGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACACC...GGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAATTCAGGAGTCAGGCTTaGAGAGAAGTCCATTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQPEGIPAIQEERPQSKQFRSQA*REVHFG Trigger: CCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAA...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | CTGTTGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCGTTTGGAGGAGGCCACTGGACCTaGGCTGTCCCATGTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKHHHKVHQDMSFPSFGGGHWT*AVPCGG Trigger: CCCACCACATGGGACAGCGCAGGTCCAGTGGCCTCC...TCCAAACGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCGTCTCAGGATCCACCTaGTTTCGGAAGACGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQESGLQRSPFWEQWCVAVSGST*FRKTPL Trigger: GAGGGGCGTCTTCCGAAACCAGGTGGATCCTGAGAC...GGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAATGTTCTCTTGTCCTATaGGAAAGCCCATGGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: TQPEGIPAIQEERPQSKQCSLVL*ESPWAL Trigger: TAGTGCCCATGGGCTTTCCCATAGGACAAGAGAACA...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAAAGCAGAGATTGGTTCTaGGCATCTGTAATCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQPEGIPAIQEERPQSKQSRDWF*ASVIPA Trigger: AGCTGGGATTACAGATGCCCAGAACCAATCTCTGCT...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | GCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCGATAGGCGGATCACCTaGGGTCAGGAGTTCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ACREVHFGSNGVWPDCFSDRRIT*GQEFKT Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCCGCCTATC...GGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | TTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTTGGGAGAACAGAGACAAGATTGGAGCTCCCTaGAGAAGTCCCTGGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGTYTQSGWCSPCWENRDKIGAP*RSPWPF Trigger: AAAGGGCCAGGGACTTCTTCAGGGAGCTCCAATCTT...GTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCCTATGGGAAAGCCCATaGGCACTAGGAAGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQESGLQRSPFWEQWCVALWESP*ALGRVG Trigger: CCCAACCCTTCCTAGTGCCCATGGGCTTTCCCATAG...GGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | CTGCTGTTGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCGTTTTGTGGTGGGGCGCACTaGCCAAAGGGGCTACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLKHHHKVHQDMSFPSFCGGAH*PKGLLS Trigger: GCTCAGTAGCCCCTTTGGCCAGTGCGCCCCACCACA...AAACGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS-3UTR GCA 90 bp | TTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTTGGGAGAACAGAGACCACTCGAGAATCTCCTaGAGCTTGCTGTCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FGTYTQSGWCSPCWENRDHSRIS*SLLSRN Trigger: ATTCCTGGACAGCAAGCTGCAGGAGATTCTCGAGTG...GTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | TTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTTGGGAGAACAGAGACCTGGTCTCGAATTCCTaGGCTCAAGCGATTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FGTYTQSGWCSPCWENRDLVSNS*AQAILS Trigger: TGAGAGAATCGCTTGAGCCCAGGAATTCGAGACCAG...GTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ACAACCCCGCCGACCCCTCCACCTTGGACTTGTAGCCTCCATATCTGTGAGAAAATAAATGCCTGCCTGTaGCCCGCATTATTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTPPTPPPWTCSLHICEKINACL*PALFMW Trigger: CCACATGAATAATGCGGGCCACAGGCAGGCATTTAT...TTTCTCACAGATATGGAGGCTACAAGTCCAAGGTGGAGGGGTCGGCGGGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | AGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGTACATGCATCAGTGGTaGGGGCTAGCAGAACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: REVHFGSNGVWPDCFSSLYMHQW*GLAEQT Trigger: GGTCTGTTCTGCTAGCCCCCACCACTGATGCATGTA...CAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | AGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGAGGCAGAGTTTGCAGTaGGCCAAGATCAAGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: REVHFGSNGVWPDCFSSLRQSLQ*AKIKPL Trigger: CAATGGCTTGATCTTGGCTCACTGCAAACTCTGCCT...CAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | CTGTTGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCGTTTGGAGGCCAAAGGGGCTACTaGGCACTTGAAATGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKHHHKVHQDMSFPSFGGQRGY*ALEMGL Trigger: GAGCCCCATTTCAAGTGCTCAGTAGCCCCTTTGGCC...TCCAAACGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS-3UTR GCA 90 bp | TGTGAGAAAATAAATGCCTGCCTGTGGCCCGCATTATTCATGTGGGCACCTGGCCTCTGCCTCCCAAATTaGTGGGGGATTATAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CEKINACLWPALFMWAPGLCLPN*WGIIGM Trigger: CATGCCTATAATCCCCCAGCAATTTGGGAGGCAGAG...GCCAGGTGCCCACATGAATAATGCGGGCCACAGGCAGGCATTTATTTTCTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTGCCAGAAGGGATCCCTaGCATCCAGGAGGAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGARRDP*HPGGAA Trigger: GGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGC...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | TTTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCAGCTTCAACTACAGGTaGATGCCACCACACCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQESGLQRSPFWEQWCVASFNYR*MPPHLF Trigger: AAACAGGTGTGGTGGCATGCACCTGTAGTTGAAGCT...GGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | AGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGGGTTTCAGGGTACAATaGACAGTTTCAGGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REVHFGSNGVWPDCFSSLGFRVQ*TVSGVR Trigger: CCTGACTCCTGAAACTGTGCATTGTACCCTGAAACC...CAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCGAGTTTAATAAGATTTaGTTGTGCCGCCGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQESGLQRSPFWEQWCVAEFNKI*LCRRAS Trigger: ACTGGCCCGGCGGCACAACCAAATCTTATTAAACTC...GGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAAAAAATTAGCAGAGATTaGTTCTGGGCATCTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: TQPEGIPAIQEERPQSKQKISRD*FWASVI Trigger: GATTACAGATGCCCAGAACCAATCTCTGCTAATTTT...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CAA 72 bp | TGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTaGGGAGAACAGAGACAGCAACAGGTCCTATTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WDIHAVRVVFTM*GEQRQQQVLLK Trigger: TTTTAATAGGACCTGTTGCTGTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCAGGCTGGGAATACACCTaGCCTCGAAAGATCTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: MDKAGFRVQCTVSGVRLAGWEYT*PRKIFA Trigger: CGCAAAGATCTTTCGAGGCCAGGTGTATTCCCAGCC...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | TGTGAGAAAATAAATGCCTGCCTGTGGCCCGCATTATTCATGTGGGCACCTGGCAAAATTAGCCTGGTTTaGTGGTGGACGCCTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: CEKINACLWPALFMWAPGKISLV*WWTPVI Trigger: GATTACAGGCGTCCACCACCAAACCAGGCTAATTTT...GCCAGGTGCCCACATGAATAATGCGGGCCACAGGCAGGCATTTATTTTCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CAA 72 bp | GTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTaGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGYNAQFQESG*QRSPFWEQWCV Trigger: CACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | CTGCTGTTGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCGTTTGGGCTACTGAGCACTTaGAATGGGGCTCTGATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLKHHHKVHQDMSFPSFGLLST*NGALMK Trigger: TTTCATCAGAGCCCCATTTCAAGTGCTCAGTAGCCC...AAACGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS-3UTR GCA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCACTGGTAGGCAGAGTTTaGAGTGAGCCAAGATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MDKAGFRVQCTVSGVRLALVGRV*SEPRSS Trigger: GCTTGATCTTGGCTCACTGCAAACTCTGCCTACCAG...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTGCAGTGAACCCAGATTaGACCACTGCACCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGAVNPD*TTAPQP Trigger: AGGCTGGGGTGCAGTGGTGCAATCTGGGTTCACTGC...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCAACTGCTTTTCCTCCCTaGCTCCTGGGCTCTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MDKAGFRVQCTVSGVRLATAFPP*LLGSVL Trigger: TAAAACAGAGCCCAGGAGCCAGGGAGGAAAAGCAGT...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCAATTAGCCTGGTTTGGTaGTGGACGCCTGTAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MDKAGFRVQCTVSGVRLAISLVW*WTPVIP Trigger: TGGGATTACAGGCGTCCACCACCAAACCAGGCTAAT...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTGCACTCCAGTCTGGGTaGCAGAGCGAAATTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGALQSG*QSEIPS Trigger: AGACGGAATTTCGCTCTGTCACCCAGACTGGAGTGC...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | CTGTTGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCGTTTGGAAAGTGCACCAAGACATaGGCTTCCCTTCGTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLKHHHKVHQDMSFPSFGKCTKT*ASLRLE Trigger: TTCCAAACGAAGGGAAGCTCATGTCTTGGTGCACTT...TCCAAACGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS-3UTR TCA 90 bp | CTGTTGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCGTTTGGATCTCAGTCCTGCTGTTaGAGCATCATCACAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKHHHKVHQDMSFPSFGSQSCC*SIITKC Trigger: GCACTTTGTGATGATGCTTCAACAGCAGGACTGAGA...TCCAAACGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS-3UTR GCA 90 bp | TGTGAGAAAATAAATGCCTGCCTGTGGCCCGCATTATTCATGTGGGCACCTGGCGTTTTCCCAGCAGTATaGAAATTCTTCATCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CEKINACLWPALFMWAPGVFPAV*KFFIVH Trigger: ATGGACGATGAAGAATTTGCATACTGCTGGGAAAAC...GCCAGGTGCCCACATGAATAATGCGGGCCACAGGCAGGCATTTATTTTCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
||
| CDS-3UTR TCA 90 bp | ACTTATATCTGCCTAGAAAATGTCAAGTCAAATTTAAAGTGTGGAGAAGGGCCTCAATGGTGTGTGGCCTaGCTGCTTTTCCTCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TYICLENVKSNLKCGEGPQWCVA*LLFLPG Trigger: GCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTG...AGGCCCTTCTCCACACTTTAAATTTGACTTGACATTTTCTAGGCAGATATAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCGTTTGGAACTGAGCACTTGAAATaGGGCTCTGATGAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKHHHKVHQDMSFPSFGTEHLK*GSDERP Trigger: AGGTCTTTCATCAGAGCCCCATTTCAAGTGCTCAGT...TCCAAACGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381565.2 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTGACAGGAGAATCACTTaGACAAGGGAGGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGDRRIT*TREAEV Trigger: AACCTCTGCCTCCCTTGTTCAAGTGATTCTCCTGTC...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR GCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTAGGGTCTCGATCTGTTaGTCAGACTGGAGTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGRVSIC*SDWSSV Trigger: CACTGAACTCCAGTCTGAGCAACAGATCGAGACCCT...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | GCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCGTCAAATTTAAAGTGTaGAGAAGGGCCTCTAAATTT | + |
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Preference number: 4 (lower is better) Translates to: ACREVHFGSNGVWPDCFSVKFKV*RRASKF Trigger: AAATTTAGAGGCCCTTCTCCACACTTTAAATTTGAC...GGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCAAAAGTTGTGTATGGTaGCTTATATCTGTAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: FQESGLQRSPFWEQWCVAKSCVW*LISVIP Trigger: TGGGATTACAGATATAAGCCACCATACACAACTTTT...GGCCACACACCATTGCTCCCAAAATGGACTTCTCTGCAAGCCTGACTCCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | ATCTGCCTAGAAAATGTCAAGTCAAATTTAAAGTGTGGAGAAGGGCCTCTAAATGGTAGGAAAATAGCTTaGACTCAGGCGGCAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ICLENVKSNLKCGEGPLNGRKIA*TQAAEA Trigger: AGCCTCTGCCGCCTGAGTTCAAGCTATTTTCCTACC...ATTTAGAGGCCCTTCTCCACACTTTAAATTTGACTTGACATTTTCTAGGCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CAA 72 bp | GATTATAGCAAGGAGTCCAAGACTTACAGCCATTTATaGCAGAAGCTATGGATAAAGCTGGTTTCAGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: DYSKESKTYSHL*QKLWIKLVSGY Trigger: GTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAAATGGCTGTAAGTCTTGGACTCCTTGCTATAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTGAAAGAATTGTAATTTaGGACATACACGCAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGERIVI*DIHAVR Trigger: CCGGACTGCGTGTATGTCCCAAATTACAATTCTTTC...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ATCTGCCTAGAAAATGTCAAGTCAAATTTAAAGTGTGGAGAAGGGCCTCTAAATCAGCGCCAAACAGTCTaGCCATTGATCTTACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ICLENVKSNLKCGEGPLNQRQTV*PLILLL Trigger: CAGAAGTAAGATCAATGGCCAGACTGTTTGGCGCTG...ATTTAGAGGCCCTTCTCCACACTTTAAATTTGACTTGACATTTTCTAGGCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CCA 90 bp | ACTTATATCTGCCTAGAAAATGTCAAGTCAAATTTAAAGTGTGGAGAAGGGCCTCTTGCATCTGAAGATTaGAGCTCCCTGAAGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TYICLENVKSNLKCGEGPLASED*SSLKKS Trigger: GGACTTCTTCAGGGAGCTCCAATCTTCAGATGCAAG...AGGCCCTTCTCCACACTTTAAATTTGACTTGACATTTTCTAGGCAGATATAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| 3UTR CAA 72 bp | AATTTCACATTTCATTTGCAAAGAAAGAATTGTAATTaGGGACATACACGCAGTCCGGGTGGTGTTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: NFTFHLQRKNCN*GHTRSPGGVHH Trigger: ATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAATGTGAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR TCA 90 bp | ACTTATATCTGCCTAGAAAATGTCAAGTCAAATTTAAAGTGTGGAGAAGGGCCTAAACAGTCTGGCCATTaGTCTTACTTCTGCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: TYICLENVKSNLKCGEGPKQSGH*SYFCIF Trigger: AAAGATGCAGAAGTAAGATCAATGGCCAGACTGTTT...AGGCCCTTCTCCACACTTTAAATTTGACTTGACATTTTCTAGGCAGATATAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | ACACAGCCAGAAGGGATCCCTGCCATCCAGGAGGAGCGGCCTCAGAGCAAACAAGCCAAGATCAAGCCATaGCACTCCAGTCTGGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: TQPEGIPAIQEERPQSKQAKIKP*HSSLGD Trigger: GTCACCCAGACTGGAGTGCAATGGCTTGATCTTGGC...TTGTTTGCTCTGAGGCCGCTCCTCCTGGATGGCAGGGATCCCTTCTGGCTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS CCA 90 bp | ATGTGGTGGGGCGCACTGGCCAAAGGGGCTACTGAGCACTTGAAATaGGGCTCTGATGAAAGACCTGGGCACCTGGCCTCGAAAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: MWWGALAKGATEHLK*GSDERPGHLASKDL Trigger: AAGATCTTTCGAGGCCAGGTGCCCAGGTCTTTCATCAGAGCCCCATTTCAAGTGCTCAGTAGCCCCTTTGGCCAGTGCGCCCCACCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS-3UTR CAA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCATGCAGTGAACCCAGATaGCACCACTGCACCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: MDKAGFRVQCTVSGVRLACSEPR*HHCTPA Trigger: GGCTGGGGTGCAGTGGTGCAATCTGGGTTCACTGCA...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGCGGTCAGGTCAGGAGTaGATCTTTAACTACCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: REVHFGSNGVWPDCFSSLRSGQE*IFNYQA Trigger: GGCCTGGTAGTTAAAGATCAACTCCTGACCTGACCG...CAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGAGACAGGAGAATCACTaGAACAAGGGAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: REVHFGSNGVWPDCFSSLRQENH*NKGGRG Trigger: ACCTCTGCCTCCCTTGTTCAAGTGATTCTCCTGTCT...CAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGGTGGTGTTCACCATGTaGGGAGAACAGAGACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: REVHFGSNGVWPDCFSSLVVFTM*GEQRQQ Trigger: TTGCTGTCTCTGTTCTCCCAACATGGTGAACACCAC...CAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTCCATTTTGGGAGCAATGGTGTGTGGCCTGACTGCTTTTCCTCCCTGAGAATCTCCTGCAGCTaGCTGTCCAGGAATAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: REVHFGSNGVWPDCFSSLRISCS*LSRNRK Trigger: CTTTCTATTCCTGGACAGCAAGCTGCAGGAGATTCT...CAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGACTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCAAGGTGGGAGAATTGCTaGAACCCAGCAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: MDKAGFRVQCTVSGVRLARWENC*NPAGRG Trigger: ACCTCTGCCTGCTGGGTTCAAGCAATTCTCCCACCT...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCATTTAATAAGATTTGGTaGTGCCGCCGGGCCAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: MDKAGFRVQCTVSGVRLAFNKIW*CRRASG Trigger: GCCACTGGCCCGGCGGCACAACCAAATCTTATTAAA...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | TTTGGGACATACACGCAGTCCGGGTGGTGTTCACCATGTTGGGAGAACAGAGACCAAACAGTCTGGCCATaGATCTTACTTCTGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: FGTYTQSGWCSPCWENRDQTVWP*ILLLHL Trigger: AAGATGCAGAAGTAAGATCAATGGCCAGACTGTTTG...GTCTCTGTTCTCCCAACATGGTGAACACCACCCGGACTGCGTGTATGTCCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | CTGCTGTTGAAGCATCATCACAAAGTGCACCAAGACATGAGCTTCCCTTCGTTTGGGGCTACTGAGCACTaGAAATGGGGCTCTGATGAA | + |
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Preference number: 5 (lower is better) Translates to: LLLKHHHKVHQDMSFPSFGATEH*KWGSDE Trigger: TTCATCAGAGCCCCATTTCAAGTGCTCAGTAGCCCC...AAACGAAGGGAAGCTCATGTCTTGGTGCACTTTGTGATGATGCTTCAACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS-3UTR CAA 90 bp | ATGGATAAAGCTGGTTTCAGGGTACAATGCACAGTTTCAGGAGTCAGGCTTGCAAGAAAGAATTGTAATTaGGGACATACACGCAGTCCG | + |
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Preference number: 5 (lower is better) Translates to: MDKAGFRVQCTVSGVRLARKNCN*GHTRSP Trigger: CGGACTGCGTGTATGTCCCAAATTACAATTCTTTCT...TGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | ATCTGCCTAGAAAATGTCAAGTCAAATTTAAAGTGTGGAGAAGGGCCTCTAAATAGGCACGAGAATCGCTaGAACTCGGAAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: ICLENVKSNLKCGEGPLNRHENR*NSEGRG Trigger: ACCTCTGCCTTCCGAGTTCAAGCGATTCTCGTGCCT...ATTTAGAGGCCCTTCTCCACACTTTAAATTTGACTTGACATTTTCTAGGCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | ACTTATATCTGCCTAGAAAATGTCAAGTCAAATTTAAAGTGTGGAGAAGGGCCTCAGGGTCTCGATCTGTaGCTCAGACTGGAGTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: TYICLENVKSNLKCGEGPQGLDL*LRLEFS Trigger: ACTGAACTCCAGTCTGAGCAACAGATCGAGACCCTG...AGGCCCTTCTCCACACTTTAAATTTGACTTGACATTTTCTAGGCAGATATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | AGAAAAGGAGAAATGTTCTCTTGTCCTATGGGAAAGCCCATGGGCACTAGGAAGACTTACAGCCATTTATaGCAGAAGCTATGGATAAAG | + |
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Preference number: 5 (lower is better) Translates to: RKGEMFSCPMGKPMGTRKTYSHL*QKLWIK Trigger: CTTTATCCATAGCTTCTGCAATAAATGGCTGTAAGT...CTTCCTAGTGCCCATGGGCTTTCCCATAGGACAAGAGAACATTTCTCCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS-3UTR CAA 90 bp | TTTCATTTGCAAAGAAAGAATTGTAATTTGGGACATACACGCAGTCCGGGTGGTAGGAGAAATGTTCTCTaGTCCTATGGGAAAGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: FHLQRKNCNLGHTRSPGGRRNVL*SYGKAH Trigger: ATGGGCTTTCCCATAGGACAAGAGAACATTTCTCCT...ACCACCCGGACTGCGTGTATGTCCCAAATTACAATTCTTTCTTTGCAAATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308521.10 |
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| CDS CCA 72 bp | CTGGGGAGGCCACTGGACCTGCGCTGTCCCATGTGGTaGGGCGCACTGGCCAAAGGGGCTACTGAGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: LGRPLDLRCPMW*GALAKGATEHL Trigger: CAAGTGCTCAGTAGCCCCTTTGGCCAGTGCGCCCCACCACATGGGACAGCGCAGGTCCAGTGGCCTCCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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| CDS CCA 72 bp | GGCGCACTGGCCAAAGGGGCTACTGAGCACTTGAAATaGGGCTCTGATGAAAGACCTGGGCACCTGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GALAKGATEHLK*GSDERPGHLAS Trigger: CGAGGCCAGGTGCCCAGGTCTTTCATCAGAGCCCCATTTCAAGTGCTCAGTAGCCCCTTTGGCCAGTGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381565.2 |
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