Pregenerated sensors for APOBEC3C (Homo sapiens)
Ensembl gene IDs: ENSG00000244509Ensembl transcript IDs: ENST00000361441.5
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACTCCCTaGCAGCCAGAAGGAGCGGCCTCAGAGGAAACAACCCCACCCACC | + |
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Preference number: 1 (lower is better) Translates to: CIEERPQRTRLEETP*QPEGAASEETTPPT Trigger: GGTGGGTGGGGTTGTTTCCTCTGAGGCCGCTCCTTCTGGCTGGCAGGGAGTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR GCA 90 bp | GCACTAGGAAGGGCTGGGAGCTGGGAGGTTCTATTGCTGAGTCGCTaGGTTTGGAGCAAGGAGTCCAAGACTTACAGCCATTTATCGCAG | + |
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Preference number: 1 (lower is better) Translates to: ALGRAGSWEVLLLSR*VWSKESKTYSHLSQ Trigger: CTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCAGCAATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CCA 90 bp | GGAAGGGCTGGGAGCTGGGAGGTTCTATTGCTGAGTCGCTGCGTTTaGAGCAAGGAGTCCAAGACTTACAGCCATTTATCGCAGAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: GRAGSWEVLLLSRCV*SKESKTYSHLSQKL Trigger: TAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCAGCAATAGAACCTCCCAGCTCCCAGCCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR GCA 90 bp | GCTTGCAGAGAAGTCCATTTCGGAAACAATGTTGTGTGGCCTGACTaGTTTTCCTCCCTGGCTCCTGGCCTCTGTTTTAGCTGGGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: ACREVHFGNNVVWPD*FSSLAPGLCFSWVG Trigger: TCCTACCCAGCTAAAACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CCA 90 bp | AGGAGTCAGGCTTGCAGAGAAGTCCATTTCGGAAACAATGTTGTGTaGCCTGACTGCTTTTCCTCCCTGGCTCCTGGCCTCTGTTTTAGC | + |
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Preference number: 1 (lower is better) Translates to: RSQACREVHFGNNVV*PDCFSSLAPGLCFS Trigger: GCTAAAACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CCA 90 bp | TTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTaGGAAGAGCAGCCTCTGGTTAACACCAGAGACAGACATTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: FLVKGDSLQGSHPAA*EEQPLVNTRDRHLG Trigger: TCCTAAATGTCTGTCTCTGGTGTTAACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR TCA 90 bp | GACAGACATTTAGGAGCAGGAGGGGTTTGGGCAGGAGCTTTATGCTaGAGAGGTTGGCTAAACATACATATTCAACAGGCTACAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: DRHLGAGGVWAGALC*RGWLNIHIQQATGG Trigger: TCCTCCTGTAGCCTGTTGAATATGTATGTTTAGCCAACCTCTTCAGCATAAAGCTCCTGCCCAAACCCCTCCTGCTCCTAAATGTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CCA 90 bp | TGGAGCAAGGAGTCCAAGACTTACAGCCATTTATCGCAGAAGCTATaGATAAAGCTGGTTTCAGGGTACAATGCACAGTCTCAGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: WSKESKTYSHLSQKL*IKLVSGYNAQSQES Trigger: TGACTCCTGAGACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACTGCCATGTGGGCACCTaGCCTGGGACATCTTCTATG | + |
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Preference number: 2 (lower is better) Translates to: PEVRVHRGKATEDTAGRDCHVGT*PGTSSM Trigger: CATAGAAGATGTCCCAGGCCAGGTGCCCACATGGCA...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACCTATTGCTGAGTCGCTaGGTTTGGAGCAAGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: PEVRVHRGKATEDTAGRDLLLSR*VWSKES Trigger: GGACTCCTTGCTCCAAACGCAGCGACTCAGCAATAG...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACCCTCGAAGTTGGACCTaGAGCTTCCAGATCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PEVRVHRGKATEDTAGRDPRSWT*SFQICE Trigger: CTCACAGATCTGGAAGCTGCAGGTCCAACTTCGAGG...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGGCACTAGGAAGGGCTaGGAGCTGGGAGGTTCTATT | + |
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Preference number: 2 (lower is better) Translates to: RSQRCVCIEERPQRTRLEGTRKG*ELGGSI Trigger: AATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGCC...TTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACGAGAAAATAAATGCCTaGCATGTGGGCACCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PEVRVHRGKATEDTAGRDEKINA*HVGTWP Trigger: AGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTC...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CAA 90 bp | GTCTCAGGAGTCAGGCTTGCAGAGAAGTCCATTTCGGAAACAATGTaGTGTGGCCTGACTGCTTTTCCTCCCTGGCTCCTGGCCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: VSGVRLAEKSISETM*CGLTAFPPWLLASV Trigger: AACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CAA 90 bp | AGGAAGGGCTGGGAGCTGGGAGGTTCTATTGCTGAGTCGCTGCGTTaGGAGCAAGGAGTCCAAGACTTACAGCCATTTATCGCAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RKGWELGGSIAESLR*EQGVQDLQPFIAEA Trigger: AGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCAGCAATAGAACCTCCCAGCTCCCAGCCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACCAGCTTCCAGATCTGTaGGAAAATAAATGCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PEVRVHRGKATEDTAGRDQLPDL*ENKCLP Trigger: TGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTG...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCGAGTTTAGTAAGATTTaGTTATGCTGGGGAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: GAISVHSSLHLSGSSNPPEFSKI*LCWGDG Trigger: CCCATCTCCCCAGCATAACCAAATCTTACTAAACTC...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGTGTGGGCACCTGGCCTaGGACATCTTCTATGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWCGHLA*DIFYGG Trigger: GCCTCCATAGAAGATGTCCCAGGCCAGGTGCCCACA...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR TCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGCAATGTTGTGTGGCCTaGCTGCTTTTCCTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWQCCVA*LLFLPG Trigger: GCCAGGGAGGAAAAGCAGTCAGGCCACACAACATTG...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGTCATGTGACCCAGCCTaGTCTGGAACTCCTGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TKLTRCGDACLLLGRLKQSCDPA*SGTPGL Trigger: GAGCCCAGGAGTTCCAGACCAGGCTGGGTCACATGA...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGCGATTCTCCCACCTTTaGCTCCCAAATTGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TKLTRCGDACLLLGRLKQRFSHL*LPNCWG Trigger: CCCCCAGCAATTTGGGAGGCAAAGGTGGGAGAATCG...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGGCAGAAAGGAGCCTCTaGAGGAAGAGTCTGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TKLTRCGDACLLLGRLKQAERSL*RKSLEE Trigger: CTCTTCCAGACTCTTCCTGCAGAGGCTCCTTTCTGC...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGCTCAGGAGTCAGGCTTaGAGAGAAGTCCATTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWLRSQA*REVHFG Trigger: TCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAG...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGGGTTTCAGGGTACAATaGACAGTCTCAGGAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWGFRVQ*TVSGVR Trigger: CCTGACTCCTGAGACTGTGCATTGTACCCTGAAACC...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR TCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGTGGTGTTCACCATGTTaGGAGAGCAAAGAGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWWCSPC*ESKEMA Trigger: TGCCATCTCTTTGCTCTCTCAACATGGTGAACACCA...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR TCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGATTAACCAGGTGTGGTaGTGCATGCCTTTTACTCGG | + |
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Preference number: 2 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWINQVW*CMPFTR Trigger: CCGAGTAAAAGGCATGCATCACCACACCTGGTTAAT...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGGGAAACAATGTTGTGTaGCCTGACTGCTTTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: TKLTRCGDACLLLGRLKQGNNVV*PDCFSS Trigger: GGAGGAAAAGCAGTCAGGCCACACAACATTGTTTCC...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGGAAAGAATTGTAATTTaGGACATACACGGAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: TKLTRCGDACLLLGRLKQERIVI*DIHGVR Trigger: CCGGACTCCGTGTATGTCTCAAATTACAATTCTTTC...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGGAATATTCATGTAGGTaGTTGCAGTCCATGCTTATT | + |
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Preference number: 2 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWEYSCR*LQSMLI Trigger: AATAAGCATGGACTGCAACCACCTACATGAATATTC...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CAA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCCCTTTGCCTCCCAAATaGCTGGGGGATTACAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: GAISVHSSLHLSGSSNPPPLPPK*LGDYRR Trigger: ACGCCTGTAATCCCCCAGCAATTTGGGAGGCAAAGG...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CAA 90 bp | AGATCCCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAATGTAGAGATGGGGCTTaGTCATGTGACCCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RSQRCVCIEERPQRTRLECRDGA*SCDPAW Trigger: CCAGGCTGGGTCACATGACAAAGCCCCATCTCTACA...TTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CAA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACTCTCAGGAGTCAGGCTaGCAGAGAAGTCCATTTCGG | + |
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Preference number: 3 (lower is better) Translates to: PEVRVHRGKATEDTAGRDSQESG*QRSPFR Trigger: CCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGA...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CCA 72 bp | AAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTaGGAAGAGCAGCCTCTGGTTAACACCAGAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: KGDSLQGSHPAA*EEQPLVNTRDR Trigger: TCTGTCTCTGGTGTTAACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR GCA 72 bp | AGGGCTGGGAGCTGGGAGGTTCTATTGCTGAGTCGCTaGGTTTGGAGCAAGGAGTCCAAGACTTACAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: RAGSWEVLLLSR*VWSKESKTYSH Trigger: ATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCAGCAATAGAACCTCCCAGCTCCCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR-3UTR CAA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGGTCCAGATTGTGCCATaGCATTCCAGCCTGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWVQIVP*HSSLDK Trigger: CTTGTCCAGGCTGGAATGCAATGGCACAATCTGGAC...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR GCA 72 bp | ACCTGCAGCTTCCAGATCTGTGAGAAAATAAATGCCTaGCATGTGGGCACCTGGCCTGGGACATCTTCTATG | + |
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Preference number: 3 (lower is better) Translates to: TCSFQICEKINA*HVGTWPGTSSM Trigger: CATAGAAGATGTCCCAGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR GCA 72 bp | CAAAGGACACTTTATTTCTTGTTAAGGGTGACAGCCTaGAAGGTAGCCATCCAGCAGCCTGGGAAGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: QRTLYFLLRVTA*KVAIQQPGKSS Trigger: GCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGTGTCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR GCA 72 bp | TTTCAGGGTACAATGCACAGTCTCAGGAGTCAGGCTTaGAGAGAAGTCCATTTCGGAAACAATGTTGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: FQGTMHSLRSQA*REVHFGNNVVW Trigger: CCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGACTGTGCATTGTACCCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR TCA 72 bp | GAGACATACACGGAGTCCGGATGGTGTTCACCATGTTaGGAGAGCAAAGAGATGGCAATTATAGAAGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: ETYTESGWCSPC*ESKEMAIIEGE Trigger: TTCTCCTTCTATAATTGCCATCTCTTTGCTCTCTCAACATGGTGAACACCATCCGGACTCCGTGTATGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CCA 72 bp | GAGTCCAAGACTTACAGCCATTTATCGCAGAAGCTATaGATAAAGCTGGTTTCAGGGTACAATGCACAGTCT | + |
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Preference number: 3 (lower is better) Translates to: ESKTYSHLSQKL*IKLVSGYNAQS Trigger: AGACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CCA 72 bp | ACAGGCTACAGGAGGAGCTATGAATATTCATGTAGGTaGTTGCAGTCCATGCTTATTGAACAAACATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: TGYRRSYEYSCR*LQSMLIEQTCV Trigger: CACACATGTTTGTTCAATAAGCATGGACTGCAACCACCTACATGAATATTCATAGCTCCTCCTGTAGCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | AGATCCCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAACTGGAAGAGACTCCCTaGCAGCCAGAAGGAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSQRCVCIEERPQRTRLELEETP*QPEGAA Trigger: GGCCGCTCCTTCTGGCTGGCAGGGAGTCTCTTCCAG...TTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCTCGGGAGGCGGAGGTTaGAGTGAGTCCAGATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPSGGGG*SESRLC Trigger: GCACAATCTGGACTCACTGCAACCTCCGCCTCCCGA...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACCACAGAGGACACGGCTaGAAGAGACTCCCTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PEVRVHRGKATEDTAGRDHRGHG*KRLPAS Trigger: GCTGGCAGGGAGTCTCTTCCAGCCGTGTCCTCTGTG...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCCAATGTTGTGTGGCCTaGCTGCTTTTCCTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPQCCVA*LLFLPG Trigger: GCCAGGGAGGAAAAGCAGTCAGGCCACACAACATTG...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCCGATTCTCCCACCTTTaGCTCCCAAATTGCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPRFSHL*LPNCWG Trigger: CCCCCAGCAATTTGGGAGGCAAAGGTGGGAGAATCG...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACTCATGTGACCCAGCCTaGTCTGGAACTCCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PEVRVHRGKATEDTAGRDSCDPA*SGTPGL Trigger: GAGCCCAGGAGTTCCAGACCAGGCTGGGTCACATGA...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACTGTGGGCACCTGGCCTaGGACATCTTCTATGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PEVRVHRGKATEDTAGRDCGHLA*DIFYGG Trigger: GCCTCCATAGAAGATGTCCCAGGCCAGGTGCCCACA...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACGTTGTGTGGCCTGACTaGTTTTCCTCCCTGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PEVRVHRGKATEDTAGRDVVWPD*FSSLAP Trigger: AGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACAAC...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCCTCAGGAGTCAGGCTTaGAGAGAAGTCCATTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPLRSQA*REVHFG Trigger: TCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAG...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCGGTTTCAGGGTACAATaGACAGTCTCAGGAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPGFRVQ*TVSGVR Trigger: CCTGACTCCTGAGACTGTGCATTGTACCCTGAAACC...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCAATCTTCATAGTCCATaGTCTCCACAGCGACCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPNLHSP*SPQRPL Trigger: AAGGGGTCGCTGTGGAGATCATGGACTATGAAGATT...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCTGGTGTTCACCATGTTaGGAGAGCAAAGAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPWCSPC*ESKEMA Trigger: TGCCATCTCTTTGCTCTCTCAACATGGTGAACACCA...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | AGATCCCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGCAGAAAGGAGCCTCTaGAGGAAGAGTCTGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RSQRCVCIEERPQRTRLEAERSL*RKSLEE Trigger: CTCTTCCAGACTCTTCCTGCAGAGGCTCCTTTCTGC...TTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | AGATCCCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAACTATTGCTGAGTCGCTaGGTTTGGAGCAAGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RSQRCVCIEERPQRTRLELLLSR*VWSKES Trigger: GGACTCCTTGCTCCAAACGCAGCGACTCAGCAATAG...TTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCGGAAACAATGTTGTGTaGCCTGACTGCTTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPGNNVV*PDCFSS Trigger: GGAGGAAAAGCAGTCAGGCCACACAACATTGTTTCC...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | GGCGCGATCTCTGTTCACTCCAGCCTCCACCTCTCGGGCTCAAGTAATCCTCCCCAGCTTCCAGATCTGTaGGAAAATAAATGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAISVHSSLHLSGSSNPPQLPDL*ENKCLP Trigger: TGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTG...GGGAGGATTACTTGAGCCCGAGAGGTGGAGGCTGGAGTGAACAGAGATCGCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACTCCAGATTGTGCCATTaGATTCCAGCCTGGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PEVRVHRGKATEDTAGRDSRLCH*IPAWTR Trigger: TCTTGTCCAGGCTGGAATGCAATGGCACAATCTGGA...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | AGATCCCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAATTATACCTTCCACGGTaGAGCACAGCCAAGTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RSQRCVCIEERPQRTRLELYLPR*STAKFR Trigger: ACGAAACTTGGCTGTGCTTCACCGTGGAAGGTATAA...TTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | AGATCCCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAATTAACCAGGTGTGGTaGTGCATGCCTTTTACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQRCVCIEERPQRTRLEINQVW*CMPFTR Trigger: CCGAGTAAAAGGCATGCATCACCACACCTGGTTAAT...TTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGGACAGGCGGATCACCTaGGGTCAGGAGTTCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQDRRIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGTC...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGTCCCAGAGGTGCGTGTaGATAGAGGAAAGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWSQRCV*IEERPQ Trigger: CTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGA...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGAGCCATCCAGCAGCCTaGGAAGAGCAGCCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQSHPAA*EEQPLV Trigger: AACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCT...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGCCTCGAAGTTGGACCTaGAGCTTCCAGATCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWPRSWT*SFQICE Trigger: CTCACAGATCTGGAAGCTGCAGGTCCAACTTCGAGG...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGGTCTCAGAATCCACCTaGTTTCGGAAGACGCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQVSEST*FRKTPV Trigger: GACGGGCGTCTTCCGAAACCAGGTGGATTCTGAGAC...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGGGCACTAGGAAGGGCTaGGAGCTGGGAGGTTCTATT | + |
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Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQGTRKG*ELGGSI Trigger: AATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGCC...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGCTTCCAGGAGACAACTaGGCGGCGCTTTATACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQLPGDN*AALYTF Trigger: GAAGGTATAAAGCGCCGCTCAGTTGTCTCCTGGAAG...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGGAGAAAATAAATGCCTaGCATGTGGGCACCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWEKINA*HVGTWP Trigger: AGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTC...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGGAGAGATCCCAGAGGTaGGTGTGCATAGAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQERSQR*VCIEER Trigger: CCTTTCCTCTATGCACACGCACCTCTGGGATCTCTC...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGTTAAGGGTGACAGCCTaGAAGGTAGCCATCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQLRVTA*KVAIQQ Trigger: CTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAA...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGTGTCCCACTCTTTTCTaGAGCGCTGTGGCTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQCPTLF*SAVASL Trigger: AAGAGAAGCCACAGCGCTTCAGAAAAGAGTGGGACA...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CAA 72 bp | AGGAGGGGTTTGGGCAGGAGCTTTATGCTGAAGAGGTaGGCTAAACATACATATTCAACAGGCTACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RRGLGRSFMLKR*AKHTYSTGYRR Trigger: CCTCCTGTAGCCTGTTGAATATGTATGTTTAGCCAACCTCTTCAGCATAAAGCTCCTGCCCAAACCCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR TCA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGGAAAGAATTGTAATTTaGGACATACACGGAGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWERIVI*DIHGVR Trigger: CCGGACTCCGTGTATGTCTCAAATTACAATTCTTTC...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| 3UTR CAA 72 bp | GTTTCAGGGTACAATGCACAGTCTCAGGAGTCAGGCTaGCAGAGAAGTCCATTTCGGAAACAATGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGYNAQSQESG*QRSPFRKQCCV Trigger: CACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGACTGTGCATTGTACCCTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR GCA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGATTCATGTAGGTGGTTaGAGTCCATGCTTATTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TKLTRCGDACLLLGRLKQIHVGG*SPCLLN Trigger: GTTCAATAAGCATGGACTGCAACCACCTACATGAAT...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CAA 90 bp | CCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAGAGACCCTTTGCCTCCCAAATaGCTGGGGGATTACAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PEVRVHRGKATEDTAGRDPLPPK*LGDYRR Trigger: ACGCCTGTAATCCCCCAGCAATTTGGGAGGCAAAGG...GTCTCTTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CAA 90 bp | AGATCCCAGAGGTGCGTGTGCATAGAGGAAAGGCCACAGAGGACACGGCTGGAAATGGTGTTCACCATGTaGAGAGAGCAAAGAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSQRCVCIEERPQRTRLEMVFTM*REQRDG Trigger: GCCATCTCTTTGCTCTCTCAACATGGTGAACACCAT...TTCCAGCCGTGTCCTCTGTGGCCTTTCCTCTATGCACACGCACCTCTGGGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CAA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGAGGAGCAGGAGGGGTTaGGGCAGGAGCTTTATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWRSRRG*GRSFML Trigger: CAGCATAAAGCTCCTGCCCAAACCCCTCCTGCTCCT...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CAA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGTGTAGAGATGGGGCTTaGTCATGTGACCCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TKLTRCGDACLLLGRLKQCRDGA*SCDPAW Trigger: CCAGGCTGGGTCACATGACAAAGCCCCATCTCTACA...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CAA 90 bp | ACTTTATTTCTTGTTAAGGGTGACAGCCTGCAAGGTAGCCATCCAGCAGCCTGGTCTCAGGAGTCAGGCTaGCAGAGAAGTCCATTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLFLVKGDSLQGSHPAAWSQESG*QRSPFR Trigger: CCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGA...CCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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| CDS-3UTR CAA 90 bp | ACAAAATTAACCAGGTGTGGTGATGCATGCCTTTTACTCGGGAGGCTGAAGCAGAGGACACTTTATTTCTaGTTAAGGGTGACAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TKLTRCGDACLLLGRLKQRTLYF*LRVTAC Trigger: GCAGGCTGTCACCCTTAACAAGAAATAAAGTGTCCT...CTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361441.5 |
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