Pregenerated sensors for APOBEC3B (Homo sapiens)
Ensembl gene IDs: ENSG00000179750Ensembl transcript IDs: ENST00000402182.7
Found 1 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | GGAGAGGAGGGAGGGATGCGGGAGGTGGGAAAGAGAAGGAGGCTGTaGGAAGGAAAGGGAGGGACGGAGCTGGGCGCCCTGTGGGGAGCA | + |
Preference number: 5 (lower is better) Translates to: GEEGGMREVGKRRRL*EGKGGTELGALWGA Trigger: TGCTCCCCACAGGGCGCCCAGCTCCGTCCCTCCCTTTCCTTCTCACAGCCTCCTTCTCTTTCCCACCTCCCGCATCCCTCCCTCCTCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402182.7 |