Pregenerated sensors for APOBEC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000124701Ensembl transcript IDs: ENST00000244669.3
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGTCCAGCTCCAAATGGTATTAGGAAGACAGGCATGTCCCAGATaGCTGTACATGTCATTGCTGTCTCTTGGTGGCAGCAGGAATACG | + |
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Preference number: 1 (lower is better) Translates to: VVQLQMVLGRQACPR*LYMSLLSLGGSRNT Trigger: CGTATTCCTGCTGCCACCAAGAGACAGCAATGACATGTACAGCCATCTGGGACATGCCTGTCTTCCTAATACCATTTGGAGCTGGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CCA 90 bp | TGGTTTAACCATGGCTTGGTTCATAGCCTGGAGTGTCCCTGTGTCTaGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: WFNHGLVHSLECPCV*TSSLVCGNFQMFKF Trigger: AAACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATGGTTAAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CCA 90 bp | AGAAGTCTGTATGGGAGAGTTATTCTGCATTGTCTAGGCAAGTCTTaGTTTAACCATGGCTTGGTTCATAGCCTGGAGTGTCCCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: RSLYGRVILHCLGKS*FNHGLVHSLECPCV Trigger: GACACAGGGACACTCCAGGCTATGAACCAAGCCATGGTTAAACCAAGACTTGCCTAGACAATGCAGAATAACTCTCCCATACAGACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR GCA 90 bp | TGCTTATTAACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCATaGTTTTTGTTCCACCTTCTGCCCTATTACTTGCCTTCAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: CLLTGIWDVATLDFS*FLFHLLPYYLPSEK Trigger: CTTCTCTGAAGGCAAGTAATAGGGCAGAAGGTGGAACAAAAAGCATGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTTAATAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CCA 90 bp | CCGCTCCTCTCTAATAAAGAAGCTAGTTGCTTATTAACTGGCATTTaGGATGTGGCTACCTTAGATTTCTCATGCTTTTTGTTCCACCTT | + |
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Preference number: 1 (lower is better) Translates to: PLLSNKEASCLLTGI*DVATLDFSCFLFHL Trigger: AAGGTGGAACAAAAAGCATGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTTAATAAGCAACTAGCTTCTTTATTAGAGAGGAGCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR TCA 90 bp | TGTCTAGGCAAGTCTTGGTTTAACCATGGCTTGGTTCATAGCCTGGAGTGTCCCAGCAGCCCCCTTGGGTaGGCAATTAGGACCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: CLGKSWFNHGLVHSLECPSSPLG*AIRTFS Trigger: ACTGAAGGTCCTAATTGCTCACCCAAGGGGGCTGCT...GGGACACTCCAGGCTATGAACCAAGCCATGGTTAAACCAAGACTTGCCTAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 90 bp | AGTCCCATAGTTGACTGGAGCCCATGTATGGTTGCATTTCTCTCCTaGCAGGTCACTTTCGTCCTTCCCGAGAGCAGCATTAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SPIVDWSPCMVAFLS*QVTFVLPESSIRER Trigger: TCTCTCTCTAATGCTGCTCTCGGGAAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAACCATACATGGGCTCCAGTCAACTATGGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCTTGTCCAGTATGATTGGTTGGTGTCAAATGTTGTCCAGCTCCAAATGGGGCTGTACATGTCATTaGTGTCTCTTGGTGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RALSSMIGWCQMLSSSKWGCTCH*CLLVAA Trigger: TGCTGCCACCAAGAGACAGCAATGACATGTACAGCC...CCATTTGGAGCTGGACAACATTTGACACCAACCAATCATACTGGACAAGGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 90 bp | GCTTGGTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTaGTCTGTGGCAACTTCCAGATGTTCAAGTTTCTTAAAAATCTGG | + |
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Preference number: 2 (lower is better) Translates to: AWFIAWSVPVSGLAR*SVATSRCSSFLKIW Trigger: CCAGATTTTTAAGAAACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 90 bp | AGAGTTATTCTGCATTGTCTAGGCAAGTCTTGGTTTAACCATGGCTaGGTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTT | + |
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Preference number: 2 (lower is better) Translates to: RVILHCLGKSWFNHG*VHSLECPCVWTSSL Trigger: AAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATGGTTAAACCAAGACTTGCCTAGACAATGCAGAATAACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATTGGCTTGGTTCATAGCCTaGAGTGTCCCTGTGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RPSLDCRKKSVWESYSALAWFIA*SVPVSG Trigger: TCCAGACACAGGGACACTCCAGGCTATGAACCAAGC...CAATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTTCTTGAGCCCATGTATGGTTaGATTTCTCTCCTTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: CVWTSSLVCGNFQMFKFLEPMYG*ISLLAG Trigger: ACCTGCAAGGAGAGAAATGCAACCATACATGGGCTC...AAGAAACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGGGTTTAACCATGGCTTaGTTCATAGCCTGGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GKGPHLIVVRSLYGRVILGLTMA*FIAWSV Trigger: GACACTCCAGGCTATGAACCAAGCCATGGTTAAACC...CAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 90 bp | CCTTCTGCCCTATTACTTGCCTTCAGAGAAGGGAAAGGCCCTCACTaGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATTGT | + |
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Preference number: 2 (lower is better) Translates to: PSALLLAFREGKGPH*IVVRSLYGRVILHC Trigger: ACAATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCCTTCTCTGAAGGCAAGTAATAGGGCAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CCA 90 bp | ATTAGGACCTTCAGTCCCATAGTTGACTGGAGCCCATGTATGGTTGCATTTCTCTCCAGTATGATTGGTTaGTGTCAAATGTTGTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: IRTFSPIVDWSPCMVAFLSSMIG*CQMLSS Trigger: GCTGGACAACATTTGACACCAACCAATCATACTGGA...GAGAAATGCAACCATACATGGGCTCCAGTCAACTATGGGACTGAAGGTCCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CCA 90 bp | CCGCTCCTCTCTAATAAAGAAGCTAGTTGCTTATTAACTGGCATTTGGGATGTGACTGGAGCCCATGTATaGTTGCATTTCTCTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PLLSNKEASCLLTGIWDVTGAHV*LHFSPC Trigger: GCAAGGAGAGAAATGCAACCATACATGGGCTCCAGT...CACATCCCAAATGCCAGTTAATAAGCAACTAGCTTCTTTATTAGAGAGGAGCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 90 bp | TTAACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCATGCTTTTaGTTCCACCTTCTGCCCTATTACTTGCCTTCAGAGAAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LTGIWDVATLDFSCF*FHLLPYYLPSEKGK Trigger: CTTTCCCTTCTCTGAAGGCAAGTAATAGGGCAGAAGGTGGAACAAAAAGCATGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CCA 90 bp | AATAAACTACAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTATTGCTGTCTCTTGGTaGCAGCAGGAATACGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: NKLQHEKYISSPLRALSSIAVSW*QQEYVR Trigger: CCTCACGTATTCCTGCTGCCACCAAGAGACAGCAAT...ACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTGTAGTTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CCA 90 bp | AATAAACTACAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTGTCATTGCTGTCTCTTaGTGGCAGCAGGAATACGTG | + |
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Preference number: 2 (lower is better) Translates to: NKLQHEKYISSPLRALSSVIAVS*WQQEYV Trigger: CACGTATTCCTGCTGCCACCAAGAGACAGCAATGAC...ACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTGTAGTTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 90 bp | GAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTATGATTGGTaGGTGTCAAATGTTGTCCAGCTCCAAATGGTATTAGGAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: EVYFKSSKGLVQYDW*VSNVVQLQMVLGRQ Trigger: CTGTCTTCCTAATACCATTTGGAGCTGGACAACATTTGACACCAACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCATGCTTTTTGTTCCACCTTCTGCCCTATTACTTGCCTTCAGAGAAGGGAACGTAAGAAGTCTGTATaGGAGAGTTATTCTGCATTG | + |
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Preference number: 2 (lower is better) Translates to: SHAFCSTFCPITCLQRRERKKSV*ESYSAL Trigger: CAATGCAGAATAACTCTCCCATACAGACTTCTTACG...TTCCCTTCTCTGAAGGCAAGTAATAGGGCAGAAGGTGGAACAAAAAGCATGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CCA 90 bp | AACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCATGCTTTTTGTTCCACCTAGTTTCTTAAAAATCTaGCCACGGGAAAAACACACC | + |
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Preference number: 2 (lower is better) Translates to: NWHLGCGYLRFLMLFVPPSFLKI*PREKHT Trigger: GGTGTGTTTTTCCCGTGGCCAGATTTTTAAGAAACT...AGGTGGAACAAAAAGCATGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 90 bp | AATAAACTACAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTaGTCCAGTATGATTGGTTGGTGTCAAATGTTGTCCAGCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: NKLQHEKYISSPLRA*SSMIGWCQMLSSSK Trigger: TTTGGAGCTGGACAACATTTGACACCAACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTGTAGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTGGCTGTACATGTCATaGCTGTCTCTTGGTGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LECPCVWTSSLVCGNFQMWLYMS*LSLGGS Trigger: GCTGCCACCAAGAGACAGCAATGACATGTACAGCCA...CATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CCA 72 bp | CATGGCTTGGTTCATAGCCTGGAGTGTCCCTGTGTCTaGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: HGLVHSLECPCV*TSSLVCGNFQM Trigger: CATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTGTCATTGCTGTCTCTaGGTGGCAGCAGGAATACGT | + |
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Preference number: 3 (lower is better) Translates to: LECPCVWTSSLVCGNFQMCHCCL*VAAGIR Trigger: ACGTATTCCTGCTGCCACCAAGAGACAGCAATGACA...CATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR TCA 72 bp | GGTCTGAGGCTGTTTGTGTTAAGCAGCCCCCTTGGGTaGGCAATTAGGACCTTCAGTCCCATAGTTGACTGG | + |
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Preference number: 3 (lower is better) Translates to: GLRLFVLSSPLG*AIRTFSPIVDW Trigger: CCAGTCAACTATGGGACTGAAGGTCCTAATTGCTCACCCAAGGGGGCTGCTTAACACAAACAGCCTCAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CCA 72 bp | GCAAGTCTTGGTTTAACCATGGCTTGGTTCATAGCCTaGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ASLGLTMAWFIA*SVPVSGLARLS Trigger: AGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATGGTTAAACCAAGACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CAA 90 bp | TTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTGTCCAGTATGATTGGTaGGTGTCAAATGTTGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: FIAWSVPVSGLARLSVATVQYDW*VSNVVQ Trigger: CTGGACAACATTTGACACCAACCAATCATACTGGAC...AGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTTCTTGGAGCCCATGTATGGTaGCATTTCTCTCCTTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: CVWTSSLVCGNFQMFKFLGAHVW*HFSPCR Trigger: CCTGCAAGGAGAGAAATGCAACCATACATGGGCTCC...AAGAAACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CAA 90 bp | AGGGAAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTAGTCCTCTAAGGGCCTaGTCCAGTATGATTGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: RERPSLDCRKKSVWESYSSPLRA*SSMIGW Trigger: CCAACCAATCATACTGGACAAGGCCCTTAGAGGACT...AGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CAA 90 bp | GGGAAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGGTTGCATTTCTCTCCTaGCAGGTCACTTTCGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: GKGPHLIVVRSLYGRVILVAFLS*QVTFVL Trigger: AAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAAC...CAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR GCA 72 bp | ACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCATaGTTTTTGTTCCACCTTCTGCCCTATTACTTGCCT | + |
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Preference number: 3 (lower is better) Translates to: TGIWDVATLDFS*FLFHLLPYYLP Trigger: AGGCAAGTAATAGGGCAGAAGGTGGAACAAAAAGCATGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CCA 72 bp | TATGGGAGAGTTATTCTGCATTGTCTAGGCAAGTCTTaGTTTAACCATGGCTTGGTTCATAGCCTGGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: YGRVILHCLGKS*FNHGLVHSLEC Trigger: ACACTCCAGGCTATGAACCAAGCCATGGTTAAACCAAGACTTGCCTAGACAATGCAGAATAACTCTCCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CCA 72 bp | GAAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATaGGAGAGTTATTCTGCATTGTCTAGGCAAGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: ERPSLDCRKKSV*ESYSALSRQVL Trigger: CAAGACTTGCCTAGACAATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATGGTTGGTGTCAAATGTaGTCCAGCTCCAAATGGTAT | + |
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Preference number: 3 (lower is better) Translates to: KGPHLIVVRSLYGRVILHGWCQM*SSSKWY Trigger: ATACCATTTGGAGCTGGACAACATTTGACACCAACC...ATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGCTAGTTGCTTATTAACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCATGGTTTAACCATGGCTaGGTTCATAGCCTGGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: EASCLLTGIWDVATLDFSWFNHG*VHSLEC Trigger: ACACTCCAGGCTATGAACCAAGCCATGGTTAAACCA...TGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTTAATAAGCAACTAGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CCA 72 bp | TATTTCAAGTCCTCTAAGGGCCTTGTCCAGTATGATTaGTTGGTGTCAAATGTTGTCCAGCTCCAAATGGTA | + |
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Preference number: 3 (lower is better) Translates to: YFKSSKGLVQYD*LVSNVVQLQMV Trigger: TACCATTTGGAGCTGGACAACATTTGACACCAACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | GTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACGTCTGGGCCAGGCCCTaGCGGCAGAGTCCCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VHSLECPCVWTSSLVCGNVWARP*RQSPKQ Trigger: CTGCTTGGGACTCTGCCGCCAGGGCCTGGCCCAGAC...GTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | CATGGCTTGGTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCCCGGCTCCTCCCACATaGAGAGTCGACCCACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: HGLVHSLECPCVWTSSLVPAPPT*RVDPPE Trigger: TTCTGGTGGGTCGACTCTTCATGTGGGAGGAGCCGG...GACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | CATGGCTTGGTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCAGATCCTCCCCATTCTaGGAGGCAGCCTCAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: HGLVHSLECPCVWTSSLVRSSPF*EAASVA Trigger: GGCCACTGAGGCTGCCTCCCAGAATGGGGAGGATCT...GACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | GGGAAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGAGAGGCAGGCAGGTCTaGGCCAGGCCCTGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GKGPHLIVVRSLYGRVILRGRQV*ARPWRQ Trigger: CTGCCGCCAGGGCCTGGCCCAGACCTGCCTGCCTCT...CAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | GTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACAGTCCTGGGGCTTCATaGTGCGCAGTTTACAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VHSLECPCVWTSSLVCGNSPGAS*CAVYSQ Trigger: CTGGCTGTAAACTGCGCATCATGAAGCCCCAGGACT...GTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | GAGCCCATGTATGGTTGCATTTCTCTCCTTGCAGGTCACTTTCGTCCTTCCCGAATTGTACCGCAGGGCTaGGTCGAAGGCTGGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: EPMYGCISLLAGHFRPSRIVPQG*VEGWQD Trigger: ATCCTGCCAGCCTTCGACCCAGCCCTGCGGTACAAT...TCGGGAAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAACCATACATGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | GTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTTCTTCAGAGCAGCCTaGATCTCCGGCTCCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VPVSGLARLSVATSRCSSFFRAA*ISGSSH Trigger: GTGGGAGGAGCCGGAGATCCAGGCTGCTCTGAAGAA...ACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | CTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGCTGGCAGGATGGTGTTaGAGAAAGCTTCCTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LECPCVWTSSLVCGNFQMLAGWC*RKLPLH Trigger: ATGCAGAGGAAGCTTTCTTCAACACCATCCTGCCAG...CATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | GAGCCCATGTATGGTTGCATTTCTCTCCTTGCAGGTCACTTTCGTCCTTCCCGAAGGACACATACCAGGTaGCATTGTACCGCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EPMYGCISLLAGHFRPSRRTHTR*HCTAGL Trigger: CAGCCCTGCGGTACAATGTCACCTGGTATGTGTCCT...TCGGGAAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAACCATACATGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | GTTGCATTTCTCTCCTTGCAGGTCACTTTCGTCCTTCCCGAGAGCAGCATTAGAATGTCCTCCCAGGGCTaGAAGGCCTTGGATTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VAFLSLQVTFVLPESSIRMSSQG*KALDSP Trigger: GGGTGAATCCAAGGCCTTTCAGCCCTGGGAGGACAT...TCTAATGCTGCTCTCGGGAAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | CTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGGTCATTGCTGTCTCTTaGTGGCAGCAGGAATACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LECPCVWTSSLVCGNFQMVIAVS*WQQEYV Trigger: CACGTATTCCTGCTGCCACCAAGAGACAGCAATGAC...CATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | ATTAGGACCTTCAGTCCCATAGTTGACTGGAGCCCATGTATGGTTGCATTTCTCGGCAGCAGGAATACGTaGGGCAAAGCCCAGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRTFSPIVDWSPCMVAFLGSRNT*GKAQLP Trigger: GGGCAACTGGGCTTTGCCTCACGTATTCCTGCTGCC...GAGAAATGCAACCATACATGGGCTCCAGTCAACTATGGGACTGAAGGTCCTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR GCA 90 bp | AGGGCCTTGTCCAGTATGATTGGTTGGTGTCAAATGTTGTCCAGCTCCAAATGGGCATGGGCAGCCGCATaGTCATCCTCTAGGTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RALSSMIGWCQMLSSSKWAWAAA*SSSRYP Trigger: GGGATACCTAGAGGATGAGCATGCGGCTGCCCATGC...CCATTTGGAGCTGGACAACATTTGACACCAACCAATCATACTGGACAAGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR GCA 90 bp | TATGGTTGCATTTCTCTCCTTGCAGGTCACTTTCGTCCTTCCCGAGAGCAGCATGAAGAAAGCTTCCTCTaGATGGGCAGCCGCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YGCISLLAGHFRPSREQHEESFL*MGSRML Trigger: GAGCATGCGGCTGCCCATGCAGAGGAAGCTTTCTTC...ATGCTGCTCTCGGGAAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAACCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | CCGCTCCTCTCTAATAAAGAAGCTAGTTGCTTATTAACTGGCATTTGGGATGTGGCAGCCTCTTCCTTCTaGGCCATGGAGGGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSNKEASCLLTGIWDVAASSF*AMEGLW Trigger: CCACAGCCCCTCCATGGCCCAGAAGGAAGAGGCTGC...CACATCCCAAATGCCAGTTAATAAGCAACTAGCTTCTTTATTAGAGAGGAGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 72 bp | GTTGACTGGAGCCCATGTATGGTTGCATTTCTCTCCTaGCAGGTCACTTTCGTCCTTCCCGAGAGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VDWSPCMVAFLS*QVTFVLPESSI Trigger: AATGCTGCTCTCGGGAAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAACCATACATGGGCTCCAGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTTCTTAAAGCTTCCTCTGCATaGGCAGCCGCATGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CVWTSSLVCGNFQMFKFLKASSA*AAACSS Trigger: GGATGAGCATGCGGCTGCCCATGCAGAGGAAGCTTT...AAGAAACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | CATGGCTTGGTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTCTAGGCAAGTCTTaGTTTAACCATGGCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HGLVHSLECPCVWTSSLVCLGKS*FNHGLV Trigger: AACCAAGCCATGGTTAAACCAAGACTTGCCTAGACA...GACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| 3UTR CAA 72 bp | CTGCATTGTCTAGGCAAGTCTTGGTTTAACCATGGCTaGGTTCATAGCCTGGAGTGTCCCTGTGTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LHCLGKSWFNHG*VHSLECPCVWT Trigger: AGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATGGTTAAACCAAGACTTGCCTAGACAATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR TCA 90 bp | AGGGAAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTAAATCTGGCTGGGGATaGCGGGAAAAGGACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RERPSLDCRKKSVWESYSKSGWG*REKDPA Trigger: TGCTGGGTCCTTTTCCCGTCATCCCCAGCCAGATTT...AGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR TCA 90 bp | CCGCTCCTCTCTAATAAAGAAGCTAGTTGCTTATTAACTGGCATTTGGGATGTGGCAGCCGTTCTCCTGTaGCAATCTCAAAGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLSNKEASCLLTGIWDVAAVLL*QSQRAA Trigger: TGCCGCCCTTTGAGATTGTCACAGGAGAACGGCTGC...CACATCCCAAATGCCAGTTAATAAGCAACTAGCTTCTTTATTAGAGAGGAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR GCA 90 bp | CTAAACCTCGGGTCTGAGGCTGTTTGTGTTAAGCAGCCCCCTTGGGTGAGCAATTTTTGTTCCACCTTCTaGCCTATTACTTGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNLGSEAVCVKQPPWVSNFCSTF*PITCLQ Trigger: CTGAAGGCAAGTAATAGGGCAGAAGGTGGAACAAAA...ATTGCTCACCCAAGGGGGCTGCTTAACACAAACAGCCTCAGACCCGAGGTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| 3UTR CAA 72 bp | ATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTaGTCTGTGGCAACTTCCAGATGTTCAAGTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IAWSVPVSGLAR*SVATSRCSSFL Trigger: TAAGAAACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | ATTTCAAGTCCTCTAAGGGCCTTGTCCAGTATGATTGGTTGGTGTCAAATGTTGAGCAGCCCCCTTGGGTaGGCAATTAGGACCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISSPLRALSSMIGWCQMLSSPLG*AIRTFS Trigger: ACTGAAGGTCCTAATTGCTCACCCAAGGGGGCTGCT...CAACATTTGACACCAACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR GCA 90 bp | GTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTGCTCCACAAAATTCTaGCAGACATATTCGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPVSGLARLSVATSRCSSCSTKF*QTYSKS Trigger: GGACTTCGAATATGTCTGGCAGAATTTTGTGGAGCA...ACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR GCA 90 bp | TCTCATGCTTTTTGTTCCACCTTCTGCCCTATTACTTGCCTTCAGAGAAGGGAAGAGGCAAAGCCCAGTTaGCCTACTTCAGGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHAFCSTFCPITCLQRREEAKPS*PTSGCL Trigger: CAGACATCCTGAAGTAGGGCAACTGGGCTTTGCCTC...TTCCCTTCTCTGAAGGCAAGTAATAGGGCAGAAGGTGGAACAAAAAGCATGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | CATGGCTTGGTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTTATTAACTGGCATTTaGGATGTGGCTACCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HGLVHSLECPCVWTSSLVLLTGI*DVATLD Trigger: ATCTAAGGTAGCCACATCCCAAATGCCAGTTAATAA...GACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAACCAAGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATCTTCAGTCCCATAGTTaGCTGGAGCCCATGTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGPHLIVVRSLYGRVILHLQSHS*LEPMYG Trigger: ACCATACATGGGCTCCAGTCAACTATGGGACTGAAG...ATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR GCA 90 bp | ATTTCAAGTCCTCTAAGGGCCTTGTCCAGTATGATTGGTTGGTGTCAAATGTTGGGCTGTACATGTCATTaGTGTCTCTTGGTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISSPLRALSSMIGWCQMLGCTCH*CLLVAA Trigger: TGCTGCCACCAAGAGACAGCAATGACATGTACAGCC...CAACATTTGACACCAACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | AACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCATGCTTTTTGTTCCACCTATTGCTGTCTCTTGGTaGCAGCAGGAATACGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NWHLGCGYLRFLMLFVPPIAVSW*QQEYVR Trigger: CCTCACGTATTCCTGCTGCCACCAAGAGACAGCAAT...AGGTGGAACAAAAAGCATGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | AGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATTGAGTCCCATAGTTGACTaGAGCCCATGTATGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPSLDCRKKSVWESYSALSPIVD*SPCMVA Trigger: TGCAACCATACATGGGCTCCAGTCAACTATGGGACT...CAATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | AATGCATATTTCAGAAATCTAAACCTCGGGTCTGAGGCTGTTTGTGTTAAGCAGGAGTGTCCCTGTGTCTaGACTAGCTCGCTTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NAYFRNLNLGSEAVCVKQECPCV*TSSLVC Trigger: ACAGACAAGCGAGCTAGTCCAGACACAGGGACACTC...CTGCTTAACACAAACAGCCTCAGACCCGAGGTTTAGATTTCTGAAATATGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | AGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATTGGGTTTAACCATGGCTTaGTTCATAGCCTGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPSLDCRKKSVWESYSALGLTMA*FIAWSV Trigger: GACACTCCAGGCTATGAACCAAGCCATGGTTAAACC...CAATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | ATTAAACTACTACTTTTCACCCGCTCCTCTCTAATAAAGAAGCTAGTTGCTTATGTCGACCCACCAGAATaGGCAGACGCAGGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKLLLFTRSSLIKKLVAYVDPPE*ADAGSW Trigger: CCAAGAACCTGCGTCTGCTCATTCTGGTGGGTCGAC...ATAAGCAACTAGCTTCTTTATTAGAGAGGAGCGGGTGAAAAGTAGTAGTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR TCA 90 bp | AAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATGGGCCTTGTCCAGTATaGTTGGTTGGTGTCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KGPHLIVVRSLYGRVILHGPCPV*LVGVKC Trigger: ACATTTGACACCAACCAATCATACTGGACAAGGCCC...ATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR GCA 90 bp | TGGTTGGTGTCAAATGTTGTCCAGCTCCAAATGGTATTAGGAAGACAGGCATGTGATTCACCCTCTTCTTaGTCCACAAAATTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLVSNVVQLQMVLGRQACDSPSS*STKFCQ Trigger: CTGGCAGAATTTTGTGGAGCAAGAAGAGGGTGAATC...ACATGCCTGTCTTCCTAATACCATTTGGAGCTGGACAACATTTGACACCAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | GGGAAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGTCCACATTCCGGAACTaGAATTTAAAGAAGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKGPHLIVVRSLYGRVILSTFRN*NLKKLA Trigger: TGCCAACTTCTTTAAATTCCAGTTCCGGAATGTGGA...CAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | GAAGCTAGTTGCTTATTAACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCAACATATTCGAAGTCCTaGGGCTTCATGATGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EASCLLTGIWDVATLDFSTYSKS*GFMMRS Trigger: ACTGCGCATCATGAAGCCCCAGGACTTCGAATATGT...TGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTTAATAAGCAACTAGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | GAAGCTAGTTGCTTATTAACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCAACTGGAGCCCATGTATaGTTGCATTTCTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EASCLLTGIWDVATLDFSTGAHV*LHFSPC Trigger: GCAAGGAGAGAAATGCAACCATACATGGGCTCCAGT...TGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTTAATAAGCAACTAGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 72 bp | TTCAAGTCCTCTAAGGGCCTTGTCCAGTATGATTGGTaGGTGTCAAATGTTGTCCAGCTCCAAATGGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: FKSSKGLVQYDW*VSNVVQLQMVL Trigger: TAATACCATTTGGAGCTGGACAACATTTGACACCAACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 72 bp | CAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTaGTCCAGTATGATTGGTTGGTGTCAAATGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHEKYISSPLRA*SSMIGWCQMLS Trigger: GGACAACATTTGACACCAACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| 3UTR CAA 72 bp | ATTTGGGATGTGGCTACCTTAGATTTCTCATGCTTTTaGTTCCACCTTCTGCCCTATTACTTGCCTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IWDVATLDFSCF*FHLLPYYLPSE Trigger: CTCTGAAGGCAAGTAATAGGGCAGAAGGTGGAACAAAAAGCATGAGAAATCTAAGGTAGCCACATCCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR GCA 90 bp | GAAGCTAGTTGCTTATTAACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCACTACTTCAGGATGTCTaGCAACTTCTCCTCGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EASCLLTGIWDVATLDFSLLQDV*QLLLVV Trigger: TACTACGAGGAGAAGTTGGCAGACATCCTGAAGTAG...TGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTTAATAAGCAACTAGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR GCA 90 bp | AGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATTGACCTTAGATTTCTCATaGTTTTTGTTCCACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPSLDCRKKSVWESYSALTLDFS*FLFHLL Trigger: CAGAAGGTGGAACAAAAAGCATGAGAAATCTAAGGT...CAATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CCA 90 bp | CAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTATGATTGGTAGTTTCTTAAAAATCTaGCCACGGGAAAAACACACC | + |
|
Preference number: 4 (lower is better) Translates to: QHEKYISSPLRALSSMIGSFLKI*PREKHT Trigger: GGTGTGTTTTTCCCGTGGCCAGATTTTTAAGAAACT...ACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR GCA 90 bp | ATTAAACTACTACTTTTCACCCGCTCCTCTCTAATAAAGAAGCTAGTTGCTTATGAGCCCATGTATGGTTaGATTTCTCTCCTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKLLLFTRSSLIKKLVAYEPMYG*ISLLAG Trigger: ACCTGCAAGGAGAGAAATGCAACCATACATGGGCTC...ATAAGCAACTAGCTTCTTTATTAGAGAGGAGCGGGTGAAAAGTAGTAGTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR CCA 90 bp | AATAAACTACAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTTCCAGTATGATTGGTTaGTGTCAAATGTTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKLQHEKYISSPLRALSSSSMIG*CQMLSS Trigger: GCTGGACAACATTTGACACCAACCAATCATACTGGA...ACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTGTAGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS TCA 90 bp | TGCGGTCAGCACACGCTGCACAGGGGCTGGAGGACACATACCAGGTaGCATTGTACCGCAGGGCTGGGTCGAAGGCTGGCAGGATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CGQHTLHRGWRTHTR*HCTAGLGRRLAGWC Trigger: ACACCATCCTGCCAGCCTTCGACCCAGCCCTGCGGTACAATGTCACCTGGTATGTGTCCTCCAGCCCCTGTGCAGCGTGTGCTGACCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS CCA 90 bp | GGGTCGAAGGCTGGCAGGATGGTGTTGAAGAAAGCTTCCTCTGCATaGGCAGCCGCATGCTCATCCTCTAGGTATCCCCGAGATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSKAGRMVLKKASSA*AAACSSSRYPRDAC Trigger: GCAGGCATCTCGGGGATACCTAGAGGATGAGCATGCGGCTGCCCATGCAGAGGAAGCTTTCTTCAACACCATCCTGCCAGCCTTCGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS CCA 90 bp | GGACACATACCAGGTGACATTGTACCGCAGGGCTGGGTCGAAGGCTaGCAGGATGGTGTTGAAGAAAGCTTCCTCTGCATGGGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GHIPGDIVPQGWVEG*QDGVEESFLCMGSR Trigger: GCGGCTGCCCATGCAGAGGAAGCTTTCTTCAACACCATCCTGCCAGCCTTCGACCCAGCCCTGCGGTACAATGTCACCTGGTATGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS CCA 90 bp | ACAGGGGCTGGAGGACACATACCAGGTGACATTGTACCGCAGGGCTaGGTCGAAGGCTGGCAGGATGGTGTTGAAGAAAGCTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGAGGHIPGDIVPQG*VEGWQDGVEESFLC Trigger: GCAGAGGAAGCTTTCTTCAACACCATCCTGCCAGCCTTCGACCCAGCCCTGCGGTACAATGTCACCTGGTATGTGTCCTCCAGCCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS CCA 90 bp | ATGCGCAGTTTACAGCCAGCCTCCTTCAGCTTCTTCAGAGCAGCCTaGATCTCCGGCTCCTCCCACATGAAGAGTCGACCCACCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: MRSLQPASFSFFRAA*ISGSSHMKSRPTRM Trigger: CATTCTGGTGGGTCGACTCTTCATGTGGGAGGAGCCGGAGATCCAGGCTGCTCTGAAGAAGCTGAAGGAGGCTGGCTGTAAACTGCGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS GCA 90 bp | GTTCTTGGTCTTGCTAAGGGTTTTGATAATGCGGTCAGCACACGCTaGACAGGGGCTGGAGGACACATACCAGGTGACATTGTACCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLGLAKGFDNAVSTR*TGAGGHIPGDIVPQ Trigger: CTGCGGTACAATGTCACCTGGTATGTGTCCTCCAGCCCCTGTGCAGCGTGTGCTGACCGCATTATCAAAACCCTTAGCAAGACCAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR CAA 90 bp | GTTCATAGCCTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACAGCAGACGCAGGTTCTaGGTCTTGCTAAGGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VHSLECPCVWTSSLVCGNSRRRF*VLLRVL Trigger: CAAAACCCTTAGCAAGACCAAGAACCTGCGTCTGCT...GTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAGGCTATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTCTGGACTAGCTCGCTaGTCTGTGGCAACTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPVSGLARLSVATSRCSSSGLAR*SVATSR Trigger: TCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGA...ACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS TCA 90 bp | GCTCCACAAAATTCTGCCAGACATATTCGAAGTCCTGGGGCTTCATaGTGCGCAGTTTACAGCCAGCCTCCTTCAGCTTCTTCAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: APQNSARHIRSPGAS*CAVYSQPPSASSEQ Trigger: CTGCTCTGAAGAAGCTGAAGGAGGCTGGCTGTAAACTGCGCATCATGAAGCCCCAGGACTTCGAATATGTCTGGCAGAATTTTGTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CCA 90 bp | CCCTCTTCTTGCTCCACAAAATTCTGCCAGACATATTCGAAGTCCTaGGGCTTCATGATGCGCAGTTTACAGCCAGCCTCCTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSSCSTKFCQTYSKS*GFMMRSLQPASFSF Trigger: GAAGCTGAAGGAGGCTGGCTGTAAACTGCGCATCATGAAGCCCCAGGACTTCGAATATGTCTGGCAGAATTTTGTGGAGCAAGAAGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | GTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTGTCATTGCTGTCTCTaGGTGGCAGCAGGAATACGT | + |
|
Preference number: 5 (lower is better) Translates to: VPVSGLARLSVATSRCSSCHCCL*VAAGIR Trigger: ACGTATTCCTGCTGCCACCAAGAGACAGCAATGACA...ACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | GTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTAGTCCTCTAAGGGCCTaGTCCAGTATGATTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPVSGLARLSVATSRCSSSPLRA*SSMIGW Trigger: CCAACCAATCATACTGGACAAGGCCCTTAGAGGACT...ACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | GTTGCATTTCTCTCCTTGCAGGTCACTTTCGTCCTTCCCGAGAGCAGCATTAGAGGAGCCCATGTATGGTaGCATTTCTCTCCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAFLSLQVTFVLPESSIRGAHVW*HFSPCR Trigger: CCTGCAAGGAGAGAAATGCAACCATACATGGGCTCC...TCTAATGCTGCTCTCGGGAAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CCA 90 bp | AGGAAGGTCTTGTTCCTCCCGGAACTGTACTCCACATTCCGGAACTaGAATTTAAAGAAGTTGGCAGGCAGCCGTTCTCCTGTGACAATC | + |
|
Preference number: 5 (lower is better) Translates to: RKVLFLPELYSTFRN*NLKKLAGSRSPVTI Trigger: GATTGTCACAGGAGAACGGCTGCCTGCCAACTTCTTTAAATTCCAGTTCCGGAATGTGGAGTACAGTTCCGGGAGGAACAAGACCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | CTGGAGTGTCCCTGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGGAGAGTTATTCTGCATaGTCTAGGCAAGTCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LECPCVWTSSLVCGNFQMESYSA*SRQVLV Trigger: AACCAAGACTTGCCTAGACAATGCAGAATAACTCTC...CATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACAGGGACACTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | CAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTATGATTGGTACATACCAGGTGACATaGTACCGCAGGGCTGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QHEKYISSPLRALSSMIGTYQVT*YRRAGS Trigger: CGACCCAGCCCTGCGGTACAATGTCACCTGGTATGT...ACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | TGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTTCTTGGATTCACCCTCTTCTaGCTCCACAAAATTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CVWTSSLVCGNFQMFKFLGFTLF*LHKILP Trigger: TGGCAGAATTTTGTGGAGCAAGAAGAGGGTGAATCC...AAGAAACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | TGTGTCTGGACTAGCTCGCTTGTCTGTGGCAACTTCCAGATGTTCAAGTTTCTTTGGTTTAACCATGGCTaGGTTCATAGCCTGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CVWTSSLVCGNFQMFKFLWFNHG*VHSLEC Trigger: ACACTCCAGGCTATGAACCAAGCCATGGTTAAACCA...AAGAAACTTGAACATCTGGAAGTTGCCACAGACAAGCGAGCTAGTCCAGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | TGGTTGGTGTCAAATGTTGTCCAGCTCCAAATGGTATTAGGAAGACAGGCATGTTGGAATTTAAAGAAGTaGGCAGGCAGCCGTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WLVSNVVQLQMVLGRQACWNLKK*AGSRSP Trigger: AGGAGAACGGCTGCCTGCCAACTTCTTTAAATTCCA...ACATGCCTGTCTTCCTAATACCATTTGGAGCTGGACAACATTTGACACCAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | AAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATGGGAAAGGCCCTCACTaGATTGTCGTAAGAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGPHLIVVRSLYGRVILHGKGPH*IVVRSL Trigger: CAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCC...ATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | AAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATGTCTTGCTAAGGGTTTaGATAATGCGGTCAGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KGPHLIVVRSLYGRVILHVLLRV*IMRSAH Trigger: GTGTGCTGACCGCATTATCAAAACCCTTAGCAAGAC...ATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | TCTCATGCTTTTTGTTCCACCTTCTGCCCTATTACTTGCCTTCAGAGAAGGGAACGCAGGTTCTTGGTCTaGCTAAGGGTTTTGATAATG | + |
|
Preference number: 5 (lower is better) Translates to: SHAFCSTFCPITCLQRRERRFLV*LRVLIM Trigger: CATTATCAAAACCCTTAGCAAGACCAAGAACCTGCG...TTCCCTTCTCTGAAGGCAAGTAATAGGGCAGAAGGTGGAACAAAAAGCATGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | AATAAACTACAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTTGGCTGTACATGTCATaGCTGTCTCTTGGTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NKLQHEKYISSPLRALSSWLYMS*LSLGGS Trigger: GCTGCCACCAAGAGACAGCAATGACATGTACAGCCA...ACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTGTAGTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | AGGGAAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGGTTGGTGTCAAATGTaGTCCAGCTCCAAATGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RERPSLDCRKKSVWESYSGWCQM*SSSKWY Trigger: ATACCATTTGGAGCTGGACAACATTTGACACCAACC...AGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | CAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTATGATTGGTCTTCTGCCCTATTACTaGCCTTCAGAGAAGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QHEKYISSPLRALSSMIGLLPYY*PSEKGK Trigger: CTTTCCCTTCTCTGAAGGCAAGTAATAGGGCAGAAG...ACCAATCATACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | ATTAGGACCTTCAGTCCCATAGTTGACTGGAGCCCATGTATGGTTGCATTTCTCCTTATTAACTGGCATTaGGGATGTGGCTACCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRTFSPIVDWSPCMVAFLLINWH*GCGYLR Trigger: TCTAAGGTAGCCACATCCCAAATGCCAGTTAATAAG...GAGAAATGCAACCATACATGGGCTCCAGTCAACTATGGGACTGAAGGTCCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | AACTGGCATTTGGGATGTGGCTACCTTAGATTTCTCATGCTTTTTGTTCCACCTGTCCAGTATGATTGGTaGGTGTCAAATGTTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NWHLGCGYLRFLMLFVPPVQYDW*VSNVVQ Trigger: CTGGACAACATTTGACACCAACCAATCATACTGGAC...AGGTGGAACAAAAAGCATGAGAAATCTAAGGTAGCCACATCCCAAATGCCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | AATAAACTACAGCATGAGAAGTATATTTCAAGTCCTCTAAGGGCCTTGTCCAGTGTTGCATTTCTCTCCTaGCAGGTCACTTTCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NKLQHEKYISSPLRALSSVAFLS*QVTFVL Trigger: AAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAAC...ACTGGACAAGGCCCTTAGAGGACTTGAAATATACTTCTCATGCTGTAGTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS-3UTR CAA 90 bp | AAAGGCCCTCACTTGATTGTCGTAAGAAGTCTGTATGGGAGAGTTATTCTGCATGATTTCTCATGCTTTTaGTTCCACCTTCTGCCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: KGPHLIVVRSLYGRVILHDFSCF*FHLLPY Trigger: ATAGGGCAGAAGGTGGAACAAAAAGCATGAGAAATC...ATGCAGAATAACTCTCCCATACAGACTTCTTACGACAATCAAGTGAGGGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS TCA 72 bp | CACACGCTGCACAGGGGCTGGAGGACACATACCAGGTaGCATTGTACCGCAGGGCTGGGTCGAAGGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HTLHRGWRTHTR*HCTAGLGRRLA Trigger: TGCCAGCCTTCGACCCAGCCCTGCGGTACAATGTCACCTGGTATGTGTCCTCCAGCCCCTGTGCAGCGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 72 bp | GCTGCACAGGGGCTGGAGGACACATACCAGGTGACATaGTACCGCAGGGCTGGGTCGAAGGCTGGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AAQGLEDTYQVT*YRRAGSKAGRM Trigger: CATCCTGCCAGCCTTCGACCCAGCCCTGCGGTACAATGTCACCTGGTATGTGTCCTCCAGCCCCTGTGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 90 bp | TCAGCACACGCTGCACAGGGGCTGGAGGACACATACCAGGTGACATaGTACCGCAGGGCTGGGTCGAAGGCTGGCAGGATGGTGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SAHAAQGLEDTYQVT*YRRAGSKAGRMVLK Trigger: CTTCAACACCATCCTGCCAGCCTTCGACCCAGCCCTGCGGTACAATGTCACCTGGTATGTGTCCTCCAGCCCCTGTGCAGCGTGTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CCA 72 bp | TTACAGCCAGCCTCCTTCAGCTTCTTCAGAGCAGCCTaGATCTCCGGCTCCTCCCACATGAAGAGTCGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LQPASFSFFRAA*ISGSSHMKSRP Trigger: GGGTCGACTCTTCATGTGGGAGGAGCCGGAGATCCAGGCTGCTCTGAAGAAGCTGAAGGAGGCTGGCTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CCA 72 bp | GCTGGCAGGATGGTGTTGAAGAAAGCTTCCTCTGCATaGGCAGCCGCATGCTCATCCTCTAGGTATCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: AGRMVLKKASSA*AAACSSSRYPR Trigger: TCGGGGATACCTAGAGGATGAGCATGCGGCTGCCCATGCAGAGGAAGCTTTCTTCAACACCATCCTGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CCA 72 bp | GGAGGACACATACCAGGTGACATTGTACCGCAGGGCTaGGTCGAAGGCTGGCAGGATGGTGTTGAAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGHIPGDIVPQG*VEGWQDGVEES Trigger: GCTTTCTTCAACACCATCCTGCCAGCCTTCGACCCAGCCCTGCGGTACAATGTCACCTGGTATGTGTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 90 bp | CCCACCAGAATGAGCAGACGCAGGTTCTTGGTCTTGCTAAGGGTTTaGATAATGCGGTCAGCACACGCTGCACAGGGGCTGGAGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: PTRMSRRRFLVLLRV*IMRSAHAAQGLEDT Trigger: TGTGTCCTCCAGCCCCTGTGCAGCGTGTGCTGACCGCATTATCAAAACCCTTAGCAAGACCAAGAACCTGCGTCTGCTCATTCTGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS GCA 72 bp | GTGTTGAAGAAAGCTTCCTCTGCATGGGCAGCCGCATaGTCATCCTCTAGGTATCCCCGAGATGCCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: VLKKASSAWAAA*SSSRYPRDACT Trigger: AGTGCAGGCATCTCGGGGATACCTAGAGGATGAGCATGCGGCTGCCCATGCAGAGGAAGCTTTCTTCAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 72 bp | ATGAGCAGACGCAGGTTCTTGGTCTTGCTAAGGGTTTaGATAATGCGGTCAGCACACGCTGCACAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MSRRRFLVLLRV*IMRSAHAAQGL Trigger: CAGCCCCTGTGCAGCGTGTGCTGACCGCATTATCAAAACCCTTAGCAAGACCAAGAACCTGCGTCTGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 90 bp | ATGAAGAGTCGACCCACCAGAATGAGCAGACGCAGGTTCTTGGTCTaGCTAAGGGTTTTGATAATGCGGTCAGCACACGCTGCACAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MKSRPTRMSRRRFLV*LRVLIMRSAHAAQG Trigger: CCCCTGTGCAGCGTGTGCTGACCGCATTATCAAAACCCTTAGCAAGACCAAGAACCTGCGTCTGCTCATTCTGGTGGGTCGACTCTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS GCA 72 bp | CTTGCTAAGGGTTTTGATAATGCGGTCAGCACACGCTaGACAGGGGCTGGAGGACACATACCAGGTGACATT | + |
|
Preference number: 6 (lower is better) Translates to: LAKGFDNAVSTR*TGAGGHIPGDI Trigger: AATGTCACCTGGTATGTGTCCTCCAGCCCCTGTGCAGCGTGTGCTGACCGCATTATCAAAACCCTTAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 72 bp | CGACCCACCAGAATGAGCAGACGCAGGTTCTTGGTCTaGCTAAGGGTTTTGATAATGCGGTCAGCACACGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPTRMSRRRFLV*LRVLIMRSAHA Trigger: AGCGTGTGCTGACCGCATTATCAAAACCCTTAGCAAGACCAAGAACCTGCGTCTGCTCATTCTGGTGGGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 90 bp | TCCCACATGAAGAGTCGACCCACCAGAATGAGCAGACGCAGGTTCTaGGTCTTGCTAAGGGTTTTGATAATGCGGTCAGCACACGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SHMKSRPTRMSRRRF*VLLRVLIMRSAHAA Trigger: TGCAGCGTGTGCTGACCGCATTATCAAAACCCTTAGCAAGACCAAGAACCTGCGTCTGCTCATTCTGGTGGGTCGACTCTTCATGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 90 bp | CTGAATGTCCTCCCAGGGCTGAAAGGCCTTGGATTCACCCTCTTCTaGCTCCACAAAATTCTGCCAGACATATTCGAAGTCCTGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LNVLPGLKGLGFTLF*LHKILPDIFEVLGL Trigger: AAGCCCCAGGACTTCGAATATGTCTGGCAGAATTTTGTGGAGCAAGAAGAGGGTGAATCCAAGGCCTTTCAGCCCTGGGAGGACATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CCA 72 bp | TGCTCCACAAAATTCTGCCAGACATATTCGAAGTCCTaGGGCTTCATGATGCGCAGTTTACAGCCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSTKFCQTYSKS*GFMMRSLQPAS Trigger: GGAGGCTGGCTGTAAACTGCGCATCATGAAGCCCCAGGACTTCGAATATGTCTGGCAGAATTTTGTGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CCA 72 bp | AGTTCTCCTGAATGTCCTCCCAGGGCTGAAAGGCCTTaGATTCACCCTCTTCTTGCTCCACAAAATTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPECPPRAERP*IHPLLAPQNSA Trigger: GGCAGAATTTTGTGGAGCAAGAAGAGGGTGAATCCAAGGCCTTTCAGCCCTGGGAGGACATTCAGGAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS TCA 72 bp | AATTCTGCCAGACATATTCGAAGTCCTGGGGCTTCATaGTGCGCAGTTTACAGCCAGCCTCCTTCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSARHIRSPGAS*CAVYSQPPSAS Trigger: AGAAGCTGAAGGAGGCTGGCTGTAAACTGCGCATCATGAAGCCCCAGGACTTCGAATATGTCTGGCAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CCA 72 bp | TTGTTCCTCCCGGAACTGTACTCCACATTCCGGAACTaGAATTTAAAGAAGTTGGCAGGCAGCCGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LFLPELYSTFRN*NLKKLAGSRSP Trigger: AGGAGAACGGCTGCCTGCCAACTTCTTTAAATTCCAGTTCCGGAATGTGGAGTACAGTTCCGGGAGGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 72 bp | AAGAGTCGACCCACCAGAATGAGCAGACGCAGGTTCTaGGTCTTGCTAAGGGTTTTGATAATGCGGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KSRPTRMSRRRF*VLLRVLIMRSA Trigger: TGCTGACCGCATTATCAAAACCCTTAGCAAGACCAAGAACCTGCGTCTGCTCATTCTGGTGGGTCGACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS GCA 72 bp | GCCTTGGATTCACCCTCTTCTTGCTCCACAAAATTCTaGCAGACATATTCGAAGTCCTGGGGCTTCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: ALDSPSSCSTKF*QTYSKSWGFMM Trigger: CATCATGAAGCCCCAGGACTTCGAATATGTCTGGCAGAATTTTGTGGAGCAAGAAGAGGGTGAATCCAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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| CDS CAA 72 bp | CTGTACTCCACATTCCGGAACTGGAATTTAAAGAAGTaGGCAGGCAGCCGTTCTCCTGTGACAATCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LYSTFRNWNLKK*AGSRSPVTISK Trigger: CTTTGAGATTGTCACAGGAGAACGGCTGCCTGCCAACTTCTTTAAATTCCAGTTCCGGAATGTGGAGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000244669.3 |
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