Pregenerated sensors for APOBEC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000111701Ensembl transcript IDs: ENST00000229304.5, ENST00000467171.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTGGGTATTGTaGCCAGTGAGCTTCATCCCCAGGTGGGTAGTTGACAAAATTCCT | + |
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Preference number: 1 (lower is better) Translates to: VQLQCVQHHPQRWVL*PVSFIPRWVVDKIP Trigger: AGGAATTTTGTCAACTACCCACCTGGGGATGAAGCTCACTGGCCACAATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR CCA 90 bp | AATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTaGGTATTGTGGCCAGTGAGCTTCATCCCCAGGTGGGTAGTTGAC | + |
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Preference number: 1 (lower is better) Translates to: NYAVQLQCVQHHPQR*VLWPVSFIPRWVVD Trigger: GTCAACTACCCACCTGGGGATGAAGCTCACTGGCCACAATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR CAA 90 bp | GCAGTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTGGGTATaGTGGCCAGTGAGCTTCATCCCCAGGTGGGTAGTTGACAAAATT | + |
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Preference number: 2 (lower is better) Translates to: AVQLQCVQHHPQRWV*WPVSFIPRWVVDKI Trigger: AATTTTGTCAACTACCCACCTGGGGATGAAGCTCACTGGCCACAATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAACAGGGTGGAAGACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACAAGGACAAGAACCAGGTaGTGGAGCAGCTCATGGATG | + |
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Preference number: 2 (lower is better) Translates to: LNRVEDLELCSAAPVRTTRTRTR*WSSSWM Trigger: CATCCATGAGCTGCTCCATCACCTGGTTCTTGTCCT...TGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACCCTGTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCATCTCCAAGCCACAGAAGGATGTATCAGCCCTGTAGCTAAAAGGATGTGTCTTCCACGTGATTGGTaGTGTTTTTGCCTGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: IHLQATEGCISPVAKRMCLPRDW*CFCLSF Trigger: GAAGCTCAGGCAAAAACACCACCAATCACGTGGAAG...ACACATCCTTTTAGCTACAGGGCTGATACATCCTTCTGTGGCTTGGAGATGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGTAATACATATTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTGGTGGTGTTTTTGCCTaGGCTTCGCCAGATCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: PEVIHIYCWFKLQSFGVPGGVFA*ASPDLP Trigger: CGGAAGATCTGGCGAAGCTCAGGCAAAAACACCACC...AGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAATATGTATTACCTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTCATCTCAACTCTCTAATAGCCTaGGAGCATTCCCAGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SSLLVLESVHTRNHPIHLNSLIA*EHSQQG Trigger: TCCCTGCTGGGAATGCTCCCAGGCTATTAGAGAGTT...GAGATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR GCA 90 bp | CATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTCATCTCCAAGCTTAGAATTATGCAGTaGAGCTCCAGTGCGTACAAC | + |
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Preference number: 2 (lower is better) Translates to: HCLFLNQYTHGIILFISKLRIMQ*SSSAYN Trigger: GTTGTACGCACTGGAGCTGCACTGCATAATTCTAAG...CTTGGAGATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGAAGACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACTTTCTAGATTCTAAATaGCATTCACTCTTTAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GGRLRIMQCSSSAYNIIHFLDSK*HSLFSG Trigger: CCCACTAAAGAGTGAATGCCATTTAGAATCTAGAAA...GTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTCATCTCAGCTTCATCCCCAGGTaGGTAGTTGACAAAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSLLVLESVHTRNHPIHLSFIPR*VVDKIP Trigger: AGGAATTTTGTCAACTACCCACCTGGGGATGAAGCT...GAGATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR CAA 90 bp | ATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTaGAATCAGTACACACACGGAATCATCCTATTCATCTCCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ILNGIHSLVGHHCLF*NQYTHGIILFISKP Trigger: TGGCTTGGAGATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR CAA 90 bp | ACATTTCTAGATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATaGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTCAT | + |
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Preference number: 2 (lower is better) Translates to: TFLDSKWHSLFSGSS*LVLESVHTRNHPIH Trigger: ATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATCTAGAAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAATACATATTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTTTAGTGGGTCATCATTaGTTGTTCTTGAATCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: EVIHIYCWFKLQSFGVPCLVGHH*LFLNQY Trigger: GTACTGATTCAAGAACAAGCAATGATGACCCACTAA...ACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAATATGTATTACCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| 3UTR CCA 72 bp | GTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTaGGTATTGTGGCCAGTGAGCTTCATCCCCAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VQLQCVQHHPQR*VLWPVSFIPRW Trigger: CCACCTGGGGATGAAGCTCACTGGCCACAATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR CCA 72 bp | CAGTGCGTACAACATCATCCACAGAGGTGGGTATTGTaGCCAGTGAGCTTCATCCCCAGGTGGGTAGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: QCVQHHPQRWVL*PVSFIPRWVVD Trigger: GTCAACTACCCACCTGGGGATGAAGCTCACTGGCCACAATACCCACCTCTGTGGATGATGTTGTACGCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR CAA 90 bp | TTAAACAGGGTGGAAGACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACACCACAGAGGTGGGTATaGTGGCCAGTGAGCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: LNRVEDLELCSAAPVRTTPQRWV*WPVSFI Trigger: GATGAAGCTCACTGGCCACAATACCCACCTCTGTGG...TGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACCCTGTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR CCA 72 bp | AGGTGGGTATTGTGGCCAGTGAGCTTCATCCCCAGGTaGGTAGTTGACAAAATTCCTCCAGCAGTGATAATA | + |
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Preference number: 3 (lower is better) Translates to: RWVLWPVSFIPR*VVDKIPPAVII Trigger: TATTATCACTGCTGGAGGAATTTTGTCAACTACCCACCTGGGGATGAAGCTCACTGGCCACAATACCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR CAA 90 bp | GAATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTGGGTATTGAGACCTTGCCGATTTaGTTGATCCATGTGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: ELCSAAPVRTTSSTEVGIETLPI*LIHVPK Trigger: TTTTGGCACATGGATCAACAAAATCGGCAAGGTCTC...AATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR CAA 90 bp | AAACAGGGTGGAAGACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACATCAAGGTCCCTGAGACCTaGCCGATTTTGTTGATCCAT | + |
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Preference number: 3 (lower is better) Translates to: KQGGRLRIMQCSSSAYNIKVPET*PILLIH Trigger: ATGGATCAACAAAATCGGCAAGGTCTCAGGGACCTT...GATGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACCCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR GCA 72 bp | ATCTTTAAACAGGGTGGAAGACTTAGAATTATGCAGTaGAGCTCCAGTGCGTACAACATCATCCACAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: IFKQGGRLRIMQ*SSSAYNIIHRG Trigger: ACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACCCTGTTTAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGGAAGACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACTTTAGTGGGTCATCATaGCTTGTTCTTGAATCAGTA | + |
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Preference number: 3 (lower is better) Translates to: GGRLRIMQCSSSAYNIIHFSGSS*LVLESV Trigger: TACTGATTCAAGAACAAGCAATGATGACCCACTAAA...GTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| 3UTR GCA 72 bp | ATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTaGTTGTTCTTGAATCAGTACACACACGGAATCATC | + |
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Preference number: 3 (lower is better) Translates to: ILNGIHSLVGHH*LFLNQYTHGII Trigger: GATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| 3UTR CAA 72 bp | CTCCAGTGCGTACAACATCATCCACAGAGGTGGGTATaGTGGCCAGTGAGCTTCATCCCCAGGTGGGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: LQCVQHHPQRWV*WPVSFIPRWVV Trigger: AACTACCCACCTGGGGATGAAGCTCACTGGCCACAATACCCACCTCTGTGGATGATGTTGTACGCACTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | GAATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTGGGTATTGGCTCATGCCCCACTTaGTTTCGTAGAGCAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: ELCSAAPVRTTSSTEVGIGSCPT*FRRADR Trigger: CCTGTCTGCTCTACGAAATCAAGTGGGGCATGAGCC...AATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | GTGCGTACAACATCATCCACAGAGGTGGGTATTGTGGCCAGTGAGCTTCATCCCTCTCAGAAGTCATGGTaGTCTGTCTCTGGACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VRTTSSTEVGIVASELHPSQKSW*SVSGLP Trigger: AGGAAGTCCAGAGACAGAGCACCATGACTTCTGAGA...GGGATGAAGCTCACTGGCCACAATACCCACCTCTGTGGATGATGTTGTACGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | GGTGGAAGACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACCAGAGGTGGGTATTGTaGCCAGTGAGCTTCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: GGRLRIMQCSSSAYNIIHQRWVL*PVSFIP Trigger: GGGGATGAAGCTCACTGGCCACAATACCCACCTCTG...GTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | GACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTGAGGACAAGAACCAGGTaGTGGAGCAGCTCATGGATG | + |
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Preference number: 4 (lower is better) Translates to: DLELCSAAPVRTTSSTEVRTRTR*WSSSWM Trigger: CATCCATGAGCTGCTCCATCACCTGGTTCTTGTCCT...CACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | CACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCGGGTATTGTGGCCAGTaGGCTTCATCCCCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HSLVGHHCLFLNQYTHGIGYCGQ*ASSPGG Trigger: CCCACCTGGGGATGAAGCTCACTGGCCACAATACCC...GATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | GAATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTGGGTATTCTTCCACGTGATTGGTaGTGTTTTTGCCTGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ELCSAAPVRTTSSTEVGILPRDW*CFCLSF Trigger: GAAGCTCAGGCAAAAACACCACCAATCACGTGGAAG...AATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | GCCACAGAAGGATGTATCAGCCCTGTAGCTAAAAGGATGTGTGGCGGAATCGTTAGCTTCATCCCCAGGTaGGTAGTTGACAAAATTCCT | + |
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Preference number: 4 (lower is better) Translates to: ATEGCISPVAKRMCGGIVSFIPR*VVDKIP Trigger: AGGAATTTTGTCAACTACCCACCTGGGGATGAAGCT...AACGATTCCGCCACACATCCTTTTAGCTACAGGGCTGATACATCCTTCTGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | CACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCAGTGGGGTCACCGGTTaGAGGACCTTTCTCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: HSLVGHHCLFLNQYTHGISGVTG*RTFLRS Trigger: ACTTCTGAGAAAGGTCCTTCAACCGGTGACCCCACT...GATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229304.5 |
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| CDS-3UTR TCA 90 bp | TTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTAGGTGGTGTTTTTGCCTaGGCTTCGCCAGATCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: LVGHHCLFLNQYTHGIILGGVFA*ASPDLP Trigger: CGGAAGATCTGGCGAAGCTCAGGCAAAAACACCACC...TAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | CACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCGCAGTGCAGCTCCAGTaGGTACAACATCATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: HSLVGHHCLFLNQYTHGIAVQLQ*VQHHPQ Trigger: CTGTGGATGATGTTGTACGCACTGGAGCTGCACTGC...GATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | TGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACAGAGGTGGGTATTGTaGCCAGTGAGCTTCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: WHSLFSGSSLLVLESVHTQRWVL*PVSFIP Trigger: GGGGATGAAGCTCACTGGCCACAATACCCACCTCTG...TGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | ACATTTCTAGATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTGGGTATTGTGGCCAGTaGGCTTCATCCCCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TFLDSKWHSLFSGSSLLVGYCGQ*ASSPGG Trigger: CCCACCTGGGGATGAAGCTCACTGGCCACAATACCC...AACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATCTAGAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | CCAGTGAGCTTCATCCCCAGGTGGGTAGTTGACAAAATTCCTCCAGCAGTGATAATCATTGCTTGTTCTTaGATCAGTACACACACGGAA | + |
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Preference number: 4 (lower is better) Translates to: PVSFIPRWVVDKIPPAVIIIACS*ISTHTE Trigger: TTCCGTGTGTGTACTGATTCAAGAACAAGCAATGAT...TATCACTGCTGGAGGAATTTTGTCAACTACCCACCTGGGGATGAAGCTCACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | CATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTCATCTCCAAGGCAGTGCAGCTCCAGTaGGTACAACATCATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: HCLFLNQYTHGIILFISKAVQLQ*VQHHPQ Trigger: CTGTGGATGATGTTGTACGCACTGGAGCTGCACTGC...CTTGGAGATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | CATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAACTCTCTAATAGCCTaGGAGCATTCCCAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: HSLFSGSSLLVLESVHTRNSLIA*EHSQQG Trigger: TCCCTGCTGGGAATGCTCCCAGGCTATTAGAGAGTT...CCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | ATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTGAACATTTCTAGATTCGGCTCATGCCCCACTTaGTTTCGTAGAGCAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: IVGLSYRVLGYLVNISRFGSCPT*FRRADR Trigger: CCTGTCTGCTCTACGAAATCAAGTGGGGCATGAGCC...GAATCTAGAAATGTTCACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | GATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGGTGGTGTTTTTGCCTaGGCTTCGCCAGATCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: DSKWHSLFSGSSLLVLESGGVFA*ASPDLP Trigger: CGGAAGATCTGGCGAAGCTCAGGCAAAAACACCACC...TGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTAAGAGTCACACCAGGGTaGCGACTCAGAAACTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LVGHHCLFLNQYTHGIILRVTPG*RLRNSL Trigger: TAGAGAGTTTCTGAGTCGGCACCCTGGTGTGACTCT...TAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | TTAAACAGGGTGGAAGACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACACTTAGAATTATGCAGTaGAGCTCCAGTGCGTACAAC | + |
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Preference number: 4 (lower is better) Translates to: LNRVEDLELCSAAPVRTTLRIMQ*SSSAYN Trigger: GTTGTACGCACTGGAGCTGCACTGCATAATTCTAAG...TGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACCCTGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | TCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATAACTCTCTAATAGCCTaGGAGCATTCCCAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLFSGSSLLVLESVHTRNNSLIA*EHSQQG Trigger: TCCCTGCTGGGAATGCTCCCAGGCTATTAGAGAGTT...ATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | TCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATGATTGGTGGTGTTTTTaGCTGAGCTTCGCCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: SLFSGSSLLVLESVHTRNDWWCF*LSFARS Trigger: AGATCTGGCGAAGCTCAGGCAAAAACACCACCAATC...ATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTAGATTGGTGGTGTTTTTaGCTGAGCTTCGCCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: LVGHHCLFLNQYTHGIILDWWCF*LSFARS Trigger: AGATCTGGCGAAGCTCAGGCAAAAACACCACCAATC...TAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | GAATTATGCAGTGCAGCTCCAGTGCGTACAACATCATCCACAGAGGTGGGTATTTTAGTGGGTCATCATTaGTTGTTCTTGAATCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: ELCSAAPVRTTSSTEVGILVGHH*LFLNQY Trigger: GTACTGATTCAAGAACAAGCAATGATGACCCACTAA...AATACCCACCTCTGTGGATGATGTTGTACGCACTGGAGCTGCACTGCATAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | GATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCACATCATCCACAGAGGTaGGTATTGTGGCCAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: DSKWHSLFSGSSLLVLESHHPQR*VLWPVS Trigger: GCTCACTGGCCACAATACCCACCTCTGTGGATGATG...TGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | GAGGTAATACATATTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTAGGACAAGAACCAGGTaGTGGAGCAGCTCATGGATG | + |
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Preference number: 4 (lower is better) Translates to: EVIHIYCWFKLQSFGVPCRTRTR*WSSSWM Trigger: CATCCATGAGCTGCTCCATCACCTGGTTCTTGTCCT...ACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAATATGTATTACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTAGAAGACTTAGAATTATaGAGTGCAGCTCCAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: LVGHHCLFLNQYTHGIILEDLEL*SAAPVR Trigger: ACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTC...TAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | CATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTCATCTCCCTTTCTCAGAAGTCATaGTGCTCTGTCTCTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: HHCLFLNQYTHGIILFISLSQKS*CSVSGL Trigger: AAGTCCAGAGACAGAGCACCATGACTTCTGAGAAAG...GGAGATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | GAGGTAATACATATTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTTTCTTCTCCTCAGAGTaGGGTCACCGGTTGAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: EVIHIYCWFKLQSFGVPCFFSSE*GHRLKD Trigger: GTCCTTCAACCGGTGACCCCACTCTGAGGAGAAGAA...ACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAATATGTATTACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229304.5 |
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| CDS-3UTR CCA 90 bp | AAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACCTTCCACGTGATTGGTaGTGTTTTTGCCTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KWHSLFSGSSLLVLESVHLPRDW*CFCLSF Trigger: GAAGCTCAGGCAAAAACACCACCAATCACGTGGAAG...GTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | TTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTGAACATTTCTAGACATCATCCACAGAGGTaGGTATTGTGGCCAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FIVGLSYRVLGYLVNISRHHPQR*VLWPVS Trigger: GCTCACTGGCCACAATACCCACCTCTGTGGATGATG...TCTAGAAATGTTCACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| 3UTR CAA 72 bp | GGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTaGAATCAGTACACACACGGAATCATCCTATTCATC | + |
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Preference number: 4 (lower is better) Translates to: GIHSLVGHHCLF*NQYTHGIILFI Trigger: GATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | GATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCATCTCAGAAGTCATGGTaGTCTGTCTCTGGACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSKWHSLFSGSSLLVLESSQKSW*SVSGLP Trigger: AGGAAGTCCAGAGACAGAGCACCATGACTTCTGAGA...TGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | TCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTAGAAGACTTAGAATTATaGAGTGCAGCTCCAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SKWHSLFSGSSLLVLESVEDLEL*SAAPVR Trigger: ACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTC...TACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGGTAATACATATTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTCTTTCTCAGAAGTCATaGTGCTCTGTCTCTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PEVIHIYCWFKLQSFGVPLSQKS*CSVSGL Trigger: AAGTCCAGAGACAGAGCACCATGACTTCTGAGAAAG...AGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAATATGTATTACCTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| 3UTR CAA 72 bp | CTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTaGTTCTTGAATCAGTACACACACGGAATCATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LNGIHSLVGHHC*FLNQYTHGIIL Trigger: TAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTAGATGCTCTCATAATCTaGATAGTTACTCCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVGHHCLFLNQYTHGIILDALII*IVTPLL Trigger: TAACAGTGGAGTAACTATTCAGATTATGAGAGCATC...TAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | TGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACAGATGCTCTCATAATCTaGATAGTTACTCCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WHSLFSGSSLLVLESVHTDALII*IVTPLL Trigger: TAACAGTGGAGTAACTATTCAGATTATGAGAGCATC...TGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | ACATTTCTAGATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTAGAATTATGCAGTaGAGCTCCAGTGCGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TFLDSKWHSLFSGSSLLVLRIMQ*SSSAYN Trigger: GTTGTACGCACTGGAGCTGCACTGCATAATTCTAAG...AACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATCTAGAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | TTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTGAACATTTCTAGAAGCTTCATCCCCAGGTaGGTAGTTGACAAAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FIVGLSYRVLGYLVNISRSFIPR*VVDKIP Trigger: AGGAATTTTGTCAACTACCCACCTGGGGATGAAGCT...TCTAGAAATGTTCACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| 3UTR CAA 72 bp | GATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATaGCTTGTTCTTGAATCAGTACACACACGGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSKWHSLFSGSS*LVLESVHTRNH Trigger: ATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTTCTAGATTCTAAATaGCATTCACTCTTTAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVGHHCLFLNQYTHGIILFLDSK*HSLFSG Trigger: CCCACTAAAGAGTGAATGCCATTTAGAATCTAGAAA...TAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CCA 90 bp | CATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTCATCTCCTTTCTAGATTCTAAATaGCATTCACTCTTTAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HHCLFLNQYTHGIILFISFLDSK*HSLFSG Trigger: CCCACTAAAGAGTGAATGCCATTTAGAATCTAGAAA...GGAGATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR TCA 90 bp | TTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTGAACATTTCTAGAATCATTGCTTGTTCTTaGATCAGTACACACACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FIVGLSYRVLGYLVNISRIIACS*ISTHTE Trigger: TTCCGTGTGTGTACTGATTCAAGAACAAGCAATGAT...TCTAGAAATGTTCACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR GCA 90 bp | GATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCATTAGTGGGTCATCATTaGTTGTTCTTGAATCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DSKWHSLFSGSSLLVLESLVGHH*LFLNQY Trigger: GTACTGATTCAAGAACAAGCAATGATGACCCACTAA...TGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | GTGCCGACTCAGAAACTCTCTAATAGCCTGGGAGCATTCCCAGCAGGGACTCCACCACAGAGGTGGGTATaGTGGCCAGTGAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VPTQKLSNSLGAFPAGTPPQRWV*WPVSFI Trigger: GATGAAGCTCACTGGCCACAATACCCACCTCTGTGG...TGGAGTCCCTGCTGGGAATGCTCCCAGGCTATTAGAGAGTTTCTGAGTCGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | TGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACAGAGTGGGGTCACCGGTaGAAGGACCTTTCTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WHSLFSGSSLLVLESVHTEWGHR*KDLSQK Trigger: CTTCTGAGAAAGGTCCTTCAACCGGTGACCCCACTC...TGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229304.5 |
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| CDS-3UTR CAA 90 bp | CACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGAATCAAGGTCCCTGAGACCTaGCCGATTTTGTTGATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSLVGHHCLFLNQYTHGIKVPET*PILLIH Trigger: ATGGATCAACAAAATCGGCAAGGTCTCAGGGACCTT...GATTCCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | GATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCACCACAGAGGTGGGTATaGTGGCCAGTGAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: DSKWHSLFSGSSLLVLESPQRWV*WPVSFI Trigger: GATGAAGCTCACTGGCCACAATACCCACCTCTGTGG...TGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTGGAAGACTTAGAATTATGCAGTGCAGCTCCAGTGCGTACAACATCGTGGGTCATCATTGCTaGTTCTTGAATCAGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: KQGGRLRIMQCSSSAYNIVGHHC*FLNQYT Trigger: TGTGTACTGATTCAAGAACAAGCAATGATGACCCAC...GATGTTGTACGCACTGGAGCTGCACTGCATAATTCTAAGTCTTCCACCCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | AAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACGTGTGGCGGAATCGTTaGGTAATGGCAGTTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KWHSLFSGSSLLVLESVHVWRNR*VMAVLK Trigger: CTTCAAAACTGCCATTACCAAACGATTCCGCCACAC...GTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | CATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTACACACACGGCATCATTGCTTGTTCTaGAATCAGTACACACACGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSLFSGSSLLVLESVHTRHHCLF*NQYTHG Trigger: TCCGTGTGTGTACTGATTCAAGAACAAGCAATGATG...CCGTGTGTGTACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | GATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTGTGGCGGAATCGTTaGGTAATGGCAGTTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSKWHSLFSGSSLLVLESVWRNR*VMAVLK Trigger: CTTCAAAACTGCCATTACCAAACGATTCCGCCACAC...TGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | CATTGCTTGTTCTTGAATCAGTACACACACGGAATCATCCTATTCATCTCCAAGCATCATTGCTTGTTCTaGAATCAGTACACACACGGA | + |
|
Preference number: 5 (lower is better) Translates to: HCLFLNQYTHGIILFISKHHCLF*NQYTHG Trigger: TCCGTGTGTGTACTGATTCAAGAACAAGCAATGATG...CTTGGAGATGAATAGGATGATTCCGTGTGTGTACTGATTCAAGAACAAGCAATG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGGTAATACATATTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTGAGACCTTGCCGATTTaGTTGATCCATGTGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PEVIHIYCWFKLQSFGVPETLPI*LIHVPK Trigger: TTTTGGCACATGGATCAACAAAATCGGCAAGGTCTC...AGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAATATGTATTACCTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | TCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTCTTGAATCAGTAGAGACCTTGCCGATTTaGTTGATCCATGTGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SKWHSLFSGSSLLVLESVETLPI*LIHVPK Trigger: TTTTGGCACATGGATCAACAAAATCGGCAAGGTCTC...TACTGATTCAAGAACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | ACATTTCTAGATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTAAGGTCCCTGAGACCTaGCCGATTTTGTTGATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TFLDSKWHSLFSGSSLLVKVPET*PILLIH Trigger: ATGGATCAACAAAATCGGCAAGGTCTCAGGGACCTT...AACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATCTAGAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTGAACATTTCTAGAGTGGGTCATCATTGCTaGTTCTTGAATCAGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: FIVGLSYRVLGYLVNISRVGHHC*FLNQYT Trigger: TGTGTACTGATTCAAGAACAAGCAATGATGACCCAC...TCTAGAAATGTTCACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | ACATTTCTAGATTCTAAATGGCATTCACTCTTTAGTGGGTCATCATTGCTTGTTTTTAGTGGGTCATCATaGCTTGTTCTTGAATCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TFLDSKWHSLFSGSSLLVFSGSS*LVLESV Trigger: TACTGATTCAAGAACAAGCAATGATGACCCACTAAA...AACAAGCAATGATGACCCACTAAAGAGTGAATGCCATTTAGAATCTAGAAATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGTTGGTTTAAGCTACAGAGTTTTGGGGTACCTTGTGAACATTTCTAGATTTAGTGGGTCATCATaGCTTGTTCTTGAATCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FIVGLSYRVLGYLVNISRFSGSS*LVLESV Trigger: TACTGATTCAAGAACAAGCAATGATGACCCACTAAA...TCTAGAAATGTTCACAAGGTACCCCAAAACTCTGTAGCTTAAACCAACAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS TCA 72 bp | CTGAGCTTCGCCAGATCTTCCGGCTCATGCCCCACTTaGTTTCGTAGAGCAGACAGGCCTCTTTACGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSFARSSGSCPT*FRRADRPLYEV Trigger: AACTTCGTAAAGAGGCCTGTCTGCTCTACGAAATCAAGTGGGGCATGAGCCGGAAGATCTGGCGAAGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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| CDS CCA 72 bp | TTTCGTAGAGCAGACAGGCCTCTTTACGAAGTTCTCTaGGGTCATAGAAGACGTCAAACTCCCAGGGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: FRRADRPLYEVL*GHRRRQTPRVR Trigger: TCGAACCCTGGGAGTTTGACGTCTTCTATGACCCCAGAGAACTTCGTAAAGAGGCCTGTCTGCTCTACGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229304.5 ENST00000467171.2 |
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