RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APOB (Homo sapiens)

Ensembl gene IDs: ENSG00000084674

Ensembl transcript IDs: ENST00000233242.5, ENST00000399256.4, ENST00000673739.1, ENST00000673882.1

Found 1451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGCGCATACAAGGTGGCTCGGCTGCGCTGATCCCTCGCCATGTTaGAGATCTCTCGCAGCTGCTGTGCTGAGGGCTCGGGGATCAGGG +
Preference number: 1 (lower is better)
Translates to: SAHTRWLGCADPSPC*RSLAAAVLRARGSG
Trigger: CCCTGATCCCCGAGCCCTCAGCACAGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 90 bp GCGCTGATCCCTCGCCATGTTGAAGATCTCTCGCAGCTGCTGTGCTaGGGGCTCGGGGATCAGGGCCACCAGGTAGGTGACCACATCTAT +
Preference number: 1 (lower is better)
Translates to: ALIPRHVEDLSQLLC*GLGDQGHQVGDHIY
Trigger: ATAGATGTGGTCACCTACCTGGTGGCCCTGATCCCCGAGCCCTCAGCACAGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 90 bp TTGTTGACCGCGTGGCTCAGCGCATACAAGGTGGCTCGGCTGCGCTaGTCCCTCGCCATGTTGAAGATCTCTCGCAGCTGCTGTGCTGAG +
Preference number: 1 (lower is better)
Translates to: LLTAWLSAYKVARLR*SLAMLKISRSCCAE
Trigger: CTCAGCACAGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGAGCCACGCGGTCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 90 bp TGGTGTCCCCGGTCAGCGGATAGTAGGAGGCGGAGTCTGTGGAGCTaGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAA +
Preference number: 1 (lower is better)
Translates to: WCPRSADSRRRSLWS*RWSKRLRCSNSGQE
Trigger: TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGCTGACCGGGGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 90 bp CCCCGGTCAGCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTaGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAAAGACTT +
Preference number: 1 (lower is better)
Translates to: PRSADSRRRSLWSWR*SKRLRCSNSGQERL
Trigger: AAGTCTTTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGCTGACCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 90 bp CTAATCTGGTGTCCCCGGTCAGCGGATAGTAGGAGGCGGAGTCTGTaGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGC +
Preference number: 1 (lower is better)
Translates to: LIWCPRSADSRRRSL*SWRWSKRLRCSNSG
Trigger: GCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGCTGACCGGGGACACCAGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 90 bp GGTCAACCACAGAGTCAGCCTTCATGTGGTAACGAGCCCGAAGGCTaGAATGGTCTGTGCTGGTGTTGCCACCACTGTAGGAGGCGGACC +
Preference number: 1 (lower is better)
Translates to: GQPQSQPSCGNEPEG*NGLCWCCHHCRRRT
Trigger: GGTCCGCCTCCTACAGTGGTGGCAACACCAGCACAGACCATTTCAGCCTTCGGGCTCGTTACCACATGAAGGCTGACTCTGTGGTTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR GCA 90 bp AGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTaGAGTAATTCAGGCCAGGAAAGACTTGCTTGCAAACTGACCAGG +
Preference number: 1 (lower is better)
Translates to: RRRSLWSWRWSKRLR*SNSGQERLACKLTR
Trigger: CCTGGTCAGTTTGCAAGCAAGTCTTTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 90 bp TGCTGGTGTTGCCACCACTGTAGGAGGCGGACCAGTTGTACAAGTTaGTGTAGACATTCGTGGAGAGGTCTAGAACACCCAGGAGAGGCA +
Preference number: 1 (lower is better)
Translates to: CWCCHHCRRRTSCTS*CRHSWRGLEHPGEA
Trigger: TGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGTCTACAGCAACTTGTACAACTGGTCCGCCTCCTACAGTGGTGGCAACACCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR GCA 90 bp CAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATAGGTTaGGCTGACAGAATACTGCTCAATCTCTCCTGTAGGCCTCAGTTC +
Preference number: 1 (lower is better)
Translates to: QGIHQGSVLSLELIG*ADRILLNLSCRPQF
Trigger: GAACTGAGGCCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 90 bp GGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACATaGGCCTCCAGACCCGACTCGTGGAAGAAGTTGGTGTTCATCTGG +
Preference number: 1 (lower is better)
Translates to: GEGMINFSFPAFRAT*ASRPDSWKKLVFIW
Trigger: CCAGATGAACACCAACTTCTTCCACGAGTCGGGTCTGGAGGCTCATGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 90 bp GATGGGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTaGTTCATCACTGAGGCCTCTCAGCTCAGTAACCAGCTTATTGAA +
Preference number: 1 (lower is better)
Translates to: DGAGHLNQLWQERCD*FITEASQLSNQLIE
Trigger: TTCAATAAGCTGGTTACTGAGCTGAGAGGCCTCAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 90 bp ACTCCAGCCTTGGCTCCGGGAGCAATGACTCCAGATGAAGATATTTaGAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATTCTCC +
Preference number: 1 (lower is better)
Translates to: TPALAPGAMTPDEDI*NCNPAPVGSSKAFS
Trigger: GGAGAATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTGGAGTCATTGCTCCCGGAGCCAAGGCTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 90 bp CACTGTAGGAGGCGGACCAGTTGTACAAGTTGCTGTAGACATTCGTaGAGAGGTCTAGAACACCCAGGAGAGGCACTTGCAGTTGATACA +
Preference number: 1 (lower is better)
Translates to: HCRRRTSCTSCCRHS*RGLEHPGEALAVDT
Trigger: TGTATCAACTGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGTCTACAGCAACTTGTACAACTGGTCCGCCTCCTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR TCA 90 bp CAGTTCCTGGAGAGTCTTCAAAACAGCTTCGGCCTGCTTTGGAGGTaGTGTGGATTTGGTGCTCTCAAATGCGAGGCCCATCTTCTTAGT +
Preference number: 1 (lower is better)
Translates to: QFLESLQNSFGLLWR*CGFGALKCEAHLLS
Trigger: ACTAAGAAGATGGGCCTCGCATTTGAGAGCACCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTTGAAGACTCTCCAGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 90 bp CAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTaGTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTTCTTTC +
Preference number: 1 (lower is better)
Translates to: QFGRRPVGEDLTSGF*LQTGYGNNTLDFSF
Trigger: GAAAGAAAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 90 bp AGAACCTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTaGATGGCAGCTTTCTGGATCATCAGTGATGGCTTTGTACTTTGG +
Preference number: 1 (lower is better)
Translates to: RTSWSLSLGSIFRRA*MAAFWIISDGFVLW
Trigger: CCAAAGTACAAAGCCATCACTGATGATCCAGAAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 90 bp TTGGGAATGGTAAAAGTAGGGACTTGGAACTCTCGAGATGGCAGATaGAATCCCACAGACTTGAAGTGGAGGGCTGGTGTCCTAACAGTC +
Preference number: 1 (lower is better)
Translates to: LGMVKVGTWNSRDGR*NPTDLKWRAGVLTV
Trigger: GACTGTTAGGACACCAGCCCTCCACTTCAAGTCTGTGGGATTCCATCTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTACCATTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 90 bp ACATTCGTGGAGAGGTCTAGAACACCCAGGAGAGGCACTTGCAGTTaGTACAACTTGGGAATGGTAAAAGTAGGGACTTGGAACTCTCGA +
Preference number: 1 (lower is better)
Translates to: TFVERSRTPRRGTCS*YNLGMVKVGTWNSR
Trigger: TCGAGAGTTCCAAGTCCCTACTTTTACCATTCCCAAGTTGTATCAACTGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CCA 90 bp GCCTGGATGGCAGCTTTCTGGATCATCAGTGATGGCTTTGTACTTTaGACACATTTCAGGATTGAAGACTTGAGTTCTGGAGTTAACTGC +
Preference number: 1 (lower is better)
Translates to: AWMAAFWIISDGFVL*THFRIEDLSSGVNC
Trigger: GCAGTTAACTCCAGAACTCAAGTCTTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATCACTGATGATCCAGAAAGCTGCCATCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 90 bp TTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTCTaGATCATCAGTGATGGCTTTGTACTTTGGACACATTTCAGGATT +
Preference number: 1 (lower is better)
Translates to: LSLGSIFRRAWMAAF*IISDGFVLWTHFRI
Trigger: AATCCTGAAATGTGTCCAAAGTACAAAGCCATCACTGATGATCCAGAAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 90 bp CTTTGGTGCAGGTCCAGTTCATATGTGCTTCTGCTTATAGTCTACTaGCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGG +
Preference number: 1 (lower is better)
Translates to: LWCRSSSYVLLLIVY*LLQGWLTVWFYQYR
Trigger: CCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAGAAGCACATATGAACTGGACCTGCACCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR CCA 90 bp GCCCATCTTCTTAGTACCTTCACCAAAGAAGCGGCTGTTGATCTTTaGTGTGTCTTCAAGTTTCAAAGTCTGTGTCACTTGTGCTACCAT +
Preference number: 1 (lower is better)
Translates to: AHLLSTFTKEAAVDL*CVFKFQSLCHLCYH
Trigger: ATGGTAGCACAAGTGACACAGACTTTGAAACTTGAAGACACACCAAAGATCAACAGCCGCTTCTTTGGTGAAGGTACTAAGAAGATGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 90 bp CTTTGGACACATTTCAGGATTGAAGACTTGAGTTCTGGAGTTAACTaGTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATCAAA +
Preference number: 1 (lower is better)
Translates to: LWTHFRIEDLSSGVN*SMVWPIFPMTRRIK
Trigger: TTTGATTCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTCTTCAATCCTGAAATGTGTCCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 90 bp ACATCAAAATCCGGAATTTGGACTTCACTGGACAAGGTCATACTCTaGCGATTATATTTGAATGTCATGGTAGCCTCAGTCTGCTTCGCA +
Preference number: 1 (lower is better)
Translates to: TSKSGIWTSLDKVIL*RLYLNVMVASVCFA
Trigger: TGCGAAGCAGACTGAGGCTACCATGACATTCAAATATAATCGGCAGAGTATGACCTTGTCCAGTGAAGTCCAAATTCCGGATTTTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR TCA 90 bp TCAGTGATGGCTTTGTACTTTGGACACATTTCAGGATTGAAGACTTaGGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAA +
Preference number: 1 (lower is better)
Translates to: SVMALYFGHISGLKT*VLELTAPWFGPYFQ
Trigger: TTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTCTTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATCACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 90 bp TCGAATCTAGAAATTTGTGGCGTAGAGACCCATCACATGATAGTGTaGACGTATTCTTGTGGTCATATGTTGTTTCTCCAGATCCTTGCA +
Preference number: 1 (lower is better)
Translates to: SNLEICGVETHHMIV*TYSCGHMLFLQILA
Trigger: TGCAAGGATCTGGAGAAACAACATATGACCACAAGAATACGTTCACACTATCATGTGATGGGTCTCTACGCCACAAATTTCTAGATTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CCA 90 bp AGATCTTGGATATCCAATTCTTCTGAGTTCAAGATATTGGCAATATaGGAAGCCACAAAGTTCTTCACTTGCTCATTCTGTTCCCATGGT +
Preference number: 1 (lower is better)
Translates to: RSWISNSSEFKILAI*EATKFFTCSFCSHG
Trigger: ACCATGGGAACAGAATGAGCAAGTGAAGAACTTTGTGGCTTCCCATATTGCCAATATCTTGAACTCAGAAGAATTGGATATCCAAGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 90 bp TTAACTCTGAGGATTGTTCCGAGGTCAACATCAAAATCCGGAATTTaGACTTCACTGGACAAGGTCATACTCTGCCGATTATATTTGAAT +
Preference number: 1 (lower is better)
Translates to: LTLRIVPRSTSKSGI*TSLDKVILCRLYLN
Trigger: ATTCAAATATAATCGGCAGAGTATGACCTTGTCCAGTGAAGTCCAAATTCCGGATTTTGATGTTGACCTCGGAACAATCCTCAGAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CCA 90 bp ACTTTTTCAGATCTTGGATATCCAATTCTTCTGAGTTCAAGATATTaGCAATATGGGAAGCCACAAAGTTCTTCACTTGCTCATTCTGTT +
Preference number: 1 (lower is better)
Translates to: TFSDLGYPILLSSRY*QYGKPQSSSLAHSV
Trigger: AACAGAATGAGCAAGTGAAGAACTTTGTGGCTTCCCATATTGCCAATATCTTGAACTCAGAAGAATTGGATATCCAAGATCTGAAAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGGCGTCCAGTGTGTACTaGCAGGACTGGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRASSVY*QDWLLL
Trigger: CAGCAGCAGCCAGTCCTGTCAGTACACACTGGACGC...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGGGGCCACCAGGTAGGTaGCCACATCTATCAGAAGGG +
Preference number: 2 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRGPPGR*PHLSEG
Trigger: CCCTTCTGATAGATGTGGTCACCTACCTGGTGGCCC...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGCCAAGGCTTGTAAAGTaGTGGGGCTGGACACCTCAA +
Preference number: 2 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRPRLVK*WGWTPQ
Trigger: TTGAGGTGTCCAGCCCCATCACTTTACAAGCCTTGG...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGCCAAGCCAATCTCGATaGGGTCAGCTGAAGCAAATC +
Preference number: 2 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQEPSQSR*GQLKQI
Trigger: GATTTGCTTCAGCTGACCTCATCGAGATTGGCTTGG...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGGACTTGCTTGCAAACTaGCCAGGACTGCCTGTTCTC +
Preference number: 2 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRDLLAN*PGLPVL
Trigger: GAGAACAGGCAGTCCTGGTCAGTTTGCAAGCAAGTC...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTAAGATCTCTCGCAGCTaGTGTGCTGAGGGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: RSSLAGDQWARISLLASAKISRS*CAEGSG
Trigger: CCCCGAGCCCTCAGCACAGCAGCTGCGAGAGATCTT...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTTCAGCGCATACAAGGTaGCTCGGCTGCGCTGATCCC +
Preference number: 2 (lower is better)
Translates to: RSSLAGDQWARISLLASASAHTR*LGCADP
Trigger: GGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGA...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGGGAGGTCATGGAGACTaGCAAAACCAAGCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRGGHGD*QNQAPL
Trigger: GAGAGGAGCTTGGTTTTGCCAGTCTCCATGACCTCC...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACGGCCTGCTTTGGAGGTaGTGTGGATTTGGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHGLLWR*CGFGAL
Trigger: GAGAGCACCAAATCCACATCACCTCCAAAGCAGGCC...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCGGCCTGCTTTGGAGGTaGTGTGGATTTGGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSGLLWR*CGFGAL
Trigger: GAGAGCACCAAATCCACATCACCTCCAAAGCAGGCC...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGTTGGAGTAAGCGCCTaGGGTGCAGTAATTCAGGCC +
Preference number: 2 (lower is better)
Translates to: RSSLAGDQWARISLLASAVGVSA*GAVIQA
Trigger: GGCCTGAATTACTGCACCTCAGGCGCTTACTCCAAC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGACTGAGCAGCTTGACTaGTCTCTTTGGGGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRTEQLD*SLWGRN
Trigger: ATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGT...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAAGACTTGCTTGCAAACTaGCCAGGACTGCCTGTTCTC +
Preference number: 2 (lower is better)
Translates to: LWSWRWSKRLRCSNSGQEDLLAN*PGLPVL
Trigger: GAGAACAGGCAGTCCTGGTCAGTTTGCAAGCAAGTC...TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACGGATCCCCTGCAGAGTaGGGGCACCCATCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHGSPAE*GHPSEA
Trigger: TGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCC...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGAACTGCTCCATGGTTTaGCCCATATTTCCAATGACC +
Preference number: 2 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRNCSMV*PIFPMT
Trigger: GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTT...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp ATTGTAGGAAAGCAGGTCAACCACAGAGTCAGCCTTCATGTGGTAACGAGCCCGGGGCCACCAGGTAGGTaGCCACATCTATCAGAAGGG +
Preference number: 2 (lower is better)
Translates to: IVGKQVNHRVSLHVVTSPGPPGR*PHLSEG
Trigger: CCCTTCTGATAGATGTGGTCACCTACCTGGTGGCCC...CGGGCTCGTTACCACATGAAGGCTGACTCTGTGGTTGACCTGCTTTCCTACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR TCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTTCTTATGATAGTTGTTaGCCGCGTGGCTCAGCGCAT +
Preference number: 2 (lower is better)
Translates to: RSSLAGDQWARISLLASASYDSC*PRGSAH
Trigger: ATGCGCTGAGCCACGCGGTCAACAACTATCATAAGA...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTCCAAGCCAATCTCGATaGGGTCAGCTGAAGCAAATC +
Preference number: 2 (lower is better)
Translates to: RSSLAGDQWARISLLASAPSQSR*GQLKQI
Trigger: GATTTGCTTCAGCTGACCTCATCGAGATTGGCTTGG...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAAATGGCTTCTGCCACATaGTTCCTCTTAGCGTCCAGT +
Preference number: 2 (lower is better)
Translates to: LWSWRWSKRLRCSNSGQEMASAT*FLLASS
Trigger: ACTGGACGCTAAGAGGAAGCATGTGGCAGAAGCCAT...TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAAGTGATGTGGATTTGGTaGTCTCAAATGCGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LWSWRWSKRLRCSNSGQEVMWIW*SQMRGP
Trigger: TGGGCCTCGCATTTGAGAGCACCAAATCCACATCAC...TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTACTGGAGGATGTGAGTaGAGCACTGAGGCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFTGGCE*STEAVH
Trigger: GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGT...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp TGTAGACATTCGTGGAGAGGTCTAGAACACCCAGGAGAGGCACTTGCAGTTGATTCAGCGCATACAAGGTaGCTCGGCTGCGCTGATCCC +
Preference number: 2 (lower is better)
Translates to: CRHSWRGLEHPGEALAVDSAHTR*LGCADP
Trigger: GGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGA...ATCAACTGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAATGCGGAGGTAGGCTCTaGCTTCCGGGACTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQCGGRL*LPGLLW
Trigger: CCAAAGAAGTCCCGGAAGCCAGAGCCTACCTCCGCA...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTTGGAGCTGTGGAGCTGGCGTTaGAGTAAGCGCCTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: EGEGSIFISSCYLVGALELWSWR*SKRLRC
Trigger: GCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG...CTCCAAGGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGCCCACAGACTTGAAGTaGAGGGCTGGTGTCCTAACA +
Preference number: 2 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRPTDLK*RAGVLT
Trigger: TGTTAGGACACCAGCCCTCCACTTCAAGTCTGTGGG...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAACAAGGTGGCTCGGCTaGGCTGATCCCTCGCCATGT +
Preference number: 2 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRTRWLG*ADPSPC
Trigger: ACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGT...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAAGCTTTCCCAGGAGCTaGAGGTCATGGAGACTGGCA +
Preference number: 2 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQSFPRS*RSWRLA
Trigger: TGCCAGTCTCCATGACCTCCAGCTCCTGGGAAAGCT...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp GCCATCCTTCTGAGTTCAGAGACCTTCCGAGCCCTGGTGCCAGCTTaGGTGCAGGTCCAGTTCATATGTGCTTCTGCTTATAGTCTACTG +
Preference number: 2 (lower is better)
Translates to: AILLSSETFRALVPA*VQVQFICASAYSLL
Trigger: CAGTAGACTATAAGCAGAAGCACATATGAACTGGACCTGCACCAAAGCTGGCACCAGGGCTCGGAAGGTCTCTGAACTCAGAAGGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR-3UTR TCA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACCAAAGAAGCGGCTGTTaGTCTTTGGTGTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHQRSGC*SLVCLQ
Trigger: TTGAAGACACACCAAAGATCAACAGCCGCTTCTTTG...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGTCATCAAGGAAAGTCTaGAGAAGAACCTCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRSSRKV*RRTSWS
Trigger: GGACCAGGAGGTTCTTCTTCAGACTTTCCTTGATGA...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR TCA 90 bp AGTTACAAACTTCAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATAGCTTTTAGGGCAACATaGGCCTCCAGACCCGACTCG +
Preference number: 2 (lower is better)
Translates to: SYKLQGIHQGSVLSLELIAFRAT*ASRPDS
Trigger: CGAGTCGGGTCTGGAGGCTCATGTTGCCCTAAAAGC...TATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTGAAGTTTGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGCTTGCAGATGGCTTCTaGCACATGCTTCCTCTTAGC +
Preference number: 2 (lower is better)
Translates to: GLDTSISCGKRDVTASSLLADGF*HMLPLS
Trigger: GCTAAGAGGAAGCATGTGGCAGAAGCCATCTGCAAG...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATATCTGGGGGATCCCCTaGAGAGTGCGGGCACCCATC +
Preference number: 2 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHIWGIP*RVRAPI
Trigger: GATGGGTGCCCGCACTCTGCAGGGGATCCCCCAGAT...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCAACTGCTCCATGGTTTaGCCCATATTTCCAATGACC +
Preference number: 2 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSNCSMV*PIFPMT
Trigger: GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTT...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTTGGATGGCAGCTTTCTaGATCATCAGTGATGGCTTT +
Preference number: 2 (lower is better)
Translates to: RSSLAGDQWARISLLASAWMAAF*IISDGF
Trigger: AAAGCCATCACTGATGATCCAGAAAGCTGCCATCCA...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTCCGCAGAGCCTGGATaGCAGCTTTCTGGATCATCA +
Preference number: 2 (lower is better)
Translates to: GGEGEGSIFISSCYLVGASAEPG*QLSGSS
Trigger: TGATGATCCAGAAAGCTGCCATCCAGGCTCTGCGGA...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR TCA 90 bp GCTTCATCACTGAGGCCTCTCAGCTCAGTAACCAGCTTATTGAAGAGATTAGCTAGGACTGGCTGCTGCTaGTCAGAGTTGACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: ASSLRPLSSVTSLLKRLARTGCC*SELTRG
Trigger: GCCCCTTGTCAACTCTGATCAGCAGCAGCCAGTCCT...AGCTAATCTCTTCAATAAGCTGGTTACTGAGCTGAGAGGCCTCAGTGATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAATCTTATGATAGTTGTTaGCCGCGTGGCTCAGCGCAT +
Preference number: 2 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQSYDSC*PRGSAH
Trigger: ATGCGCTGAGCCACGCGGTCAACAACTATCATAAGA...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAAACACCATCAGGAACTTaGCCATTAACCCAGTACAAA +
Preference number: 2 (lower is better)
Translates to: LWSWRWSKRLRCSNSGQETPSGT*PLTQYK
Trigger: TTTGTACTGGGTTAATGGTCAAGTTCCTGATGGTGT...TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTAAAACAGCTTCGGCCTaGTTTGGAGGTGATGTGGAT +
Preference number: 2 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFKTASA*FGGDVD
Trigger: ATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTT...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTCAAGAGAGATGTGACTaGTTCATCACTGAGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFQERCD*FITEAS
Trigger: AGAGGCCTCAGTGATGAAGCAGTCACATCTCTCTTG...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GAACTCCTTCAGGCTATTGAGGTGGTCTTGCAAAGTCTGGGTATAAGGAAGACTTTGGCAGGCGACCAGTaGGCGAGGATCTCACTTCTG +
Preference number: 2 (lower is better)
Translates to: ELLQAIEVVLQSLGIRKTLAGDQ*ARISLL
Trigger: CAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAA...AGTCTTCCTTATACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATAGGACTGGCTGCTGCTaGTCAGAGTTGACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHRTGCC*SELTRG
Trigger: GCCCCTTGTCAACTCTGATCAGCAGCAGCCAGTCCT...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp GGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATCAAAGATCCCTCGCCATGTTaGAGATCTCTCGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GVNCSMVWPIFPMTRRIKDPSPC*RSLAAA
Trigger: AGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATC...TTTGATTCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTGCTTTTAGGGCAACATaGGCCTCCAGACCCGACTCG +
Preference number: 2 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFAFRAT*ASRPDS
Trigger: CGAGTCGGGTCTGGAGGCTCATGTTGCCCTAAAAGC...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGATGGCTTCTGCCACATaGTTCCTCTTAGCGTCCAGT +
Preference number: 2 (lower is better)
Translates to: SLELIGCADRILLNLSCRMASAT*FLLASS
Trigger: ACTGGACGCTAAGAGGAAGCATGTGGCAGAAGCCAT...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp GAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTTGGAGGCGCTGACAGAATACTaGTCAATCTCTCCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: EGEGSIFISSCYLVGALEALTEY*SISPVG
Trigger: GCCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGC...CTCCAAGGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp GGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATCAAAACTGGAGGATGTGAGTaGAGCACTGAGGCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: GVNCSMVWPIFPMTRRIKTGGCE*STEAVH
Trigger: GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGT...TTTGATTCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GAACTCCTTCAGGCTATTGAGGTGGTCTTGCAAAGTCTGGGTATAAGGAAGACTGTTCCAGCTCTAATCTaGTGTCCCCGGTCAGCGGAT +
Preference number: 2 (lower is better)
Translates to: ELLQAIEVVLQSLGIRKTVPALI*CPRSAD
Trigger: ATCCGCTGACCGGGGACACCAGATTAGAGCTGGAAC...AGTCTTCCTTATACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTCTCGAGATGGCAGATaGAATCCCACAGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: GGEGEGSIFISSCYLVGASRDGR*NPTDLK
Trigger: CTTCAAGTCTGTGGGATTCCATCTGCCATCTCGAGA...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CAA 90 bp AGAGTCTTCAAAACAGCTTCGGCCTGCTTTGGAGGTGATGTGGATTaGGTGCTCTCAAATGCGAGGCCCATCTTCTTAGTACCTTCACCA +
Preference number: 2 (lower is better)
Translates to: RVFKTASACFGGDVD*VLSNARPIFLVPSP
Trigger: TGGTGAAGGTACTAAGAAGATGGGCCTCGCATTTGAGAGCACCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTTGAAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp ACCAGTTCAGCCTGCATGTTGGCTACTTCCAGTTTTACTCCAGCCTaGGCTCCGGGAGCAATGACTCCAGATGAAGATATTTGCAACTGT +
Preference number: 2 (lower is better)
Translates to: TSSACMLATSSFTPA*APGAMTPDEDICNC
Trigger: ACAGTTGCAAATATCTTCATCTGGAGTCATTGCTCCCGGAGCCAAGGCTGGAGTAAAACTGGAAGTAGCCAACATGCAGGCTGAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp TTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTaGCAAACGGGGTATGGAAATAACACCCTTGATTTTTCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: FGRRPVGEDLTSGFC*QTGYGNNTLDFSFF
Trigger: GAAGAAAGAAAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp TCCCATGTTCTGGAGGTTGAACTCCTTCAGGCTATTGAGGTGGTCTaGCAAAGTCTGGGTATAAGGAAGACTCCCAGATGCCTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: SHVLEVELLQAIEVV*QSLGIRKTPRCLLK
Trigger: CTTCAGAAGGCATCTGGGAGTCTTCCTTATACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTCAACCTCCAGAACATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp AGGTTTTCTGGGATGTGGAAGTCTGGCAATCCCATGTTCTGGAGGTaGAACTCCTTCAGGCTATTGAGGTGGTCTTGCAAAGTCTGGGTA +
Preference number: 2 (lower is better)
Translates to: RFSGMWKSGNPMFWR*NSFRLLRWSCKVWV
Trigger: TACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTCAACCTCCAGAACATGGGATTGCCAGACTTCCACATCCCAGAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCAGGCAGGAGAATTGCTTaGACCCGGAAGGCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: DMVVNRLVSTKDTQISRAGRRIA*TRKAEL
Trigger: CAACTCTGCCTTCCGGGTTCAAGCAATTCTCCTGCC...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
3UTR-3UTR TCA 90 bp CAAAGGAATCTCAATTTTCAAACTGTTCTTGTTCAAGGTATATTTGACCCGGCCGTGGCTCGGCTGCGCTaGTCCCTCGCCATGTTGAAG +
Preference number: 2 (lower is better)
Translates to: QRNLNFQTVLVQGIFDPAVARLR*SLAMLK
Trigger: CTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCAC...GGCCGGGTCAAATATACCTTGAACAAGAACAGTTTGAAAATTGAGATTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CCTCCACTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCGGCCCATATTTCCAATaGCCCGCAGAATCAAATAGG +
Preference number: 2 (lower is better)
Translates to: PPLSSLTGLFGEGMINFSGPYFQ*PAESNR
Trigger: CCTATTTGATTCTGCGGGTCATTGGAAATATGGGCC...GCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGCATCACATGATAGTGTaGACGTATTCTTGTGGTCAT +
Preference number: 2 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRHHMIV*TYSCGH
Trigger: ATGACCACAAGAATACGTTCACACTATCATGTGATG...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp AGTTACAAACTTCAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATAGTGATGTGGATTTGGTaGTCTCAAATGCGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SYKLQGIHQGSVLSLELIVMWIW*SQMRGP
Trigger: TGGGCCTCGCATTTGAGAGCACCAAATCCACATCAC...TATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTGAAGTTTGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACAAGAGATTAGCTCTCTaGATATTTTGCTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHKRLAL*IFCSEM
Trigger: CATCTCTGAGCAAAATATCCAGAGAGCTAATCTCTT...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGAAGAGATTAGCTCTCTaGATATTTTGCTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLKRLAL*IFCSEM
Trigger: CATCTCTGAGCAAAATATCCAGAGAGCTAATCTCTT...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCGATGGCTTTGTACTTTaGACACATTTCAGGATTGAA +
Preference number: 2 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSDGFVL*THFRIE
Trigger: TTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATC...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GAAGAGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATAGGAGGCGGAGTCTGTaGAGCTGGCGTTGGAGTAAG +
Preference number: 2 (lower is better)
Translates to: EEKSSDKPAMFRLFVWSNRRRSL*SWRWSK
Trigger: CTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCT...ATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR TCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCGATCCCTCGCCATGTTaGAGATCTCTCGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SNFLVLNVQGESVRRFALDPSPC*RSLAAA
Trigger: AGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATC...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR TCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACACACCATCAGGAACTTaGCCATTAACCCAGTACAAA +
Preference number: 2 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHTPSGT*PLTQYK
Trigger: TTTGTACTGGGTTAATGGTCAAGTTCCTGATGGTGT...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCACCCGGAAGGCAGAGTTaGAGTGAGCCGAGATTGTAT +
Preference number: 2 (lower is better)
Translates to: DMVVNRLVSTKDTQISRAPGRQS*SEPRLY
Trigger: ATACAATCTCGGCTCACTGCAACTCTGCCTTCCGGG...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
3UTR-3UTR GCA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAAAAACAGCTTCGGCCTaGTTTGGAGGTGATGTGGAT +
Preference number: 2 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPKTASA*FGGDVD
Trigger: ATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTT...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp AGTTACAAACTTCAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATACAAGAGAGATGTGACTaGTTCATCACTGAGGCCTCT +
Preference number: 2 (lower is better)
Translates to: SYKLQGIHQGSVLSLELIQERCD*FITEAS
Trigger: AGAGGCCTCAGTGATGAAGCAGTCACATCTCTCTTG...TATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTGAAGTTTGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCAAGAAGGGGGTTGGCATaGACACGTTTCAGCCACTGG +
Preference number: 2 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPRRGLA*TRFSHW
Trigger: CCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCT...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673882.1
3UTR-3UTR GCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCACCAGTTGTACAAGTTaGTGTAGACATTCGTGGAGA +
Preference number: 2 (lower is better)
Translates to: GGEGEGSIFISSCYLVGATSCTS*CRHSWR
Trigger: TCTCCACGAATGTCTACAGCAACTTGTACAACTGGT...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAGCGGCTGTTGATCTTTaGTGTGTCTTCAAGTTTCAA +
Preference number: 2 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQAAVDL*CVFKFQ
Trigger: TTGAAACTTGAAGACACACCAAAGATCAACAGCCGC...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACGAGTTAACTGCTCCATaGTTTGGCCCATATTTCCAA +
Preference number: 2 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHELTAP*FGPYFQ
Trigger: TTGGAAATATGGGCCAAACCATGGAGCAGTTAACTC...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp AGGCACTTGCAGTTGATACAACTTGGGAATGGTAAAAGTAGGGACTaGGAACTCTCGAGATGGCAGATGGAATCCCACAGACTTGAAGTG +
Preference number: 2 (lower is better)
Translates to: RHLQLIQLGNGKSRD*ELSRWQMESHRLEV
Trigger: CACTTCAAGTCTGTGGGATTCCATCTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTACCATTCCCAAGTTGTATCAACTGCAAGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp TCTGCATTCAGCTCATTCTCCAGCACCAGGAGACTACACTTCAAGTaGGTCGTTGCACTGGTAGATATTCCATCTTGGCCAATCCTTAGT +
Preference number: 2 (lower is better)
Translates to: SAFSSFSSTRRLHFK*VVALVDIPSWPILS
Trigger: ACTAAGGATTGGCCAAGATGGAATATCTACCAGTGCAACGACCAACTTGAAGTGTAGTCTCCTGGTGCTGGAGAATGAGCTGAATGCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR TCA 90 bp AGAAACAGATTTGTAGAGTTGATAGTTCCGAGAGAATTTTCTGAAGTCCATGACGCGTCCAGTGTGTACTaGCAGGACTGGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: RNRFVELIVPREFSEVHDASSVY*QDWLLL
Trigger: CAGCAGCAGCCAGTCCTGTCAGTACACACTGGACGC...GTCATGGACTTCAGAAAATTCTCTCGGAACTATCAACTCTACAAATCTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp GGACAAGGTCATACTCTGCCGATTATATTTGAATGTCATGGTAGCCTCAGTCTGCTCGATGAGGTCAGCTaGAGCAAATCCAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: GQGHTLPIIFECHGSLSLLDEVS*SKSKGS
Trigger: ACTGCCTTTGGATTTGCTTCAGCTGACCTCATCGAG...CAGACTGAGGCTACCATGACATTCAAATATAATCGGCAGAGTATGACCTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp GAAGAGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATGCCACCAGTTCAGCCTaGATGTTGGCTACTTCCAGT +
Preference number: 2 (lower is better)
Translates to: EEKSSDKPAMFRLFVWSNATSSA*MLATSS
Trigger: ACTGGAAGTAGCCAACATGCAGGCTGAACTGGTGGC...ATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAAACCTCTCCAATCATCTaGGGGATCCCCTGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKTSPII*GIPCRV
Trigger: CACTCTGCAGGGGATCCCCCAGATGATTGGAGAGGT...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp CCGCAGAATCAAATAGGTGTAATCTTCATCCCCAGTGCAGTCATCTaGAATCTGTTCCATCAGGTAATTAGCAATGTCCAGCAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PQNQIGVIFIPSAVI*NLFHQVISNVQQLL
Trigger: CAGGAGCTGCTGGACATTGCTAATTACCTGATGGAACAGATTCAAGATGACTGCACTGGGGATGAAGATTACACCTATTTGATTCTGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp TTACCAGCCACATGCAGCTTCAGGGGTTCTAGCCGTAGTTTCCCATaGTTGGTGAGATCCAGAGCATTGTATTTCAGGTCACTGTTTAAA +
Preference number: 2 (lower is better)
Translates to: LPATCSFRGSSRSFP*LVRSRALYFRSLFK
Trigger: TTTAAACAGTGACCTGAAATACAATGCTCTGGATCTCACCAACAATGGGAAACTACGGCTAGAACCCCTGAAGCTGCATGTGGCTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR TCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTGTTAACATTTCCATGTaGTCCAAGAGTCATCTTCAG +
Preference number: 2 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTVNISM*SKSHLQ
Trigger: CTGAAGATGACTCTTGGATCACATGGAAATGTTAAC...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
3UTR-3UTR TCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTCCAAGGCTTGTAAAGTaGTGGGGCTGGACACCTCAA +
Preference number: 2 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPPRLVK*WGWTPQ
Trigger: TTGAGGTGTCCAGCCCCATCACTTTACAAGCCTTGG...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCATTTCTGGATCATCAGTaGTGGCTTTGTACTTTGGAC +
Preference number: 2 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPFLDHQ*WLCTLD
Trigger: GTCCAAAGTACAAAGCCATCACTGATGATCCAGAAA...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTTCATCAAGGAAAGTCTaGAGAAGAACCTCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFSSRKV*RRTSWS
Trigger: GGACCAGGAGGTTCTTCTTCAGACTTTCCTTGATGA...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCACTCGATGAGGTCAGCTaGAGCAAATCCAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPLDEVS*SKSKGS
Trigger: ACTGCCTTTGGATTTGCTTCAGCTGACCTCATCGAG...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
3UTR-3UTR TCA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTTGGCTCCGGGAGCAATaGCTCCAGATGAAGATATTT +
Preference number: 2 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFWLREQ*LQMKIF
Trigger: AAATATCTTCATCTGGAGTCATTGCTCCCGGAGCCA...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp GAAGACTCCCAGATGCCTTCTGAAGCCATGAGCTCATTGCAACTATTAATTTGGGCTCATAGGTTGCGCTaGCAGAATACTGCTCAATCT +
Preference number: 2 (lower is better)
Translates to: EDSQMPSEAMSSLQLLIWAHRLR*QNTAQS
Trigger: AGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGC...CCAAATTAATAGTTGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCAATAAGCTGTAGCAGATaGGTCCATTTGGAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPISCSR*VHLEKQ
Trigger: CTGCTTCTCCAAATGGACTCATCTGCTACAGCTTAT...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACAGAGGTGTTGCTCCTTaGAGATGGCTTCTGCCACAT +
Preference number: 2 (lower is better)
Translates to: QESISIHMQALRIIGEIHRGVAP*RWLLPH
Trigger: ATGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCT...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp TGTAAAGTGATGGGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTAGTCTGTGTCACTTGTaGTACCATCCCATACTTATT +
Preference number: 2 (lower is better)
Translates to: CKVMGLDTSISCGKRDVTSLCHL*YHPILI
Trigger: AATAAGTATGGGATGGTAGCACAAGTGACACAGACT...AGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCCCATCACTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp ATATTCGAATCTAGAAATTTGTGGCGTAGAGACCCATCACATGATAGTGTGAACAGAAGGGGGTTGGCATaGACACGTTTCAGCCACTGG +
Preference number: 2 (lower is better)
Translates to: IFESRNLWRRDPSHDSVNRRGLA*TRFSHW
Trigger: CCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCT...GTTCACACTATCATGTGATGGGTCTCTACGCCACAAATTTCTAGATTCGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGACAAAGTTCTTCACTTaGTCATTCTGTTCCCATGGT +
Preference number: 2 (lower is better)
Translates to: SLELIGCADRILLNLSCRTKFFT*SFCSHG
Trigger: ACCATGGGAACAGAATGAGCAAGTGAAGAACTTTGT...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCAAGTAAGCGCCTGAGGTaGAGTAATTCAGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPSKRLR*SNSGQE
Trigger: TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACT...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
3UTR-3UTR GCA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCAGCGCTGACAGAATACTaGTCAATCTCTCCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPALTEY*SISPVG
Trigger: GCCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGC...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
3UTR-3UTR GCA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACTTCTGGCTTCTGCTTaGAAACGGGGTATGGAAATA +
Preference number: 2 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPLLASA*KRGMEI
Trigger: TATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAG...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAAGGAGGTCATGGAGACTaGCAAAACCAAGCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKGGHGD*QNQAPL
Trigger: GAGAGGAGCTTGGTTTTGCCAGTCTCCATGACCTCC...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GGACAAGGTCATACTCTGCCGATTATATTTGAATGTCATGGTAGCCTCAGTCTGGTAATCCAGCTCCAGTaGGGAGTTCAAAGGCATTCT +
Preference number: 2 (lower is better)
Translates to: GQGHTLPIIFECHGSLSLVIQLQ*GVQRHS
Trigger: AGAATGCCTTTGAACTCCCCACTGGAGCTGGATTAC...CAGACTGAGGCTACCATGACATTCAAATATAATCGGCAGAGTATGACCTTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CAA 90 bp GTGACTGCTTCATCACTGAGGCCTCTCAGCTCAGTAACCAGCTTATaGAAGAGATTAGCTCTCTGGATATTTTGCTCAGAGATGGTTAGT +
Preference number: 2 (lower is better)
Translates to: VTASSLRPLSSVTSL*KRLALWIFCSEMVS
Trigger: ACTAACCATCTCTGAGCAAAATATCCAGAGAGCTAATCTCTTCAATAAGCTGGTTACTGAGCTGAGAGGCCTCAGTGATGAAGCAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCTGCTTATAGTCTACTaGCTACTGCAAGGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: TPFICSSSPKFSKITQILLLIVY*LLQGWL
Trigger: GAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR-3UTR GCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAACTTGCAGATGGCTTCTaGCACATGCTTCCTCTTAGC +
Preference number: 2 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKLADGF*HMLPLS
Trigger: GCTAAGAGGAAGCATGTGGCAGAAGCCATCTGCAAG...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTAGAGGTGTTGCTCCTTaGAGATGGCTTCTGCCACAT +
Preference number: 2 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPRGVAP*RWLLPH
Trigger: ATGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCT...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATAGTTCTGGAGTTAACTaGTCCATGGTTTGGCCCATA +
Preference number: 2 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHSSGVN*SMVWPI
Trigger: TATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAACAAAGTTCTTCACTTaGTCATTCTGTTCCCATGGT +
Preference number: 2 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPTKFFT*SFCSHG
Trigger: ACCATGGGAACAGAATGAGCAAGTGAAGAACTTTGT...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAACCATTTACCATATCCTaGTCATGTTTATCATCTTTG +
Preference number: 2 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQPFTIS*SCLSSL
Trigger: CAAAGATGATAAACATGAGCAGGATATGGTAAATGG...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp GAACTCCTTCAGGCTATTGAGGTGGTCTTGCAAAGTCTGGGTATAAGGAAGACTGCGGCTGTTGATCTTTaGTGTGTCTTCAAGTTTCAA +
Preference number: 2 (lower is better)
Translates to: ELLQAIEVVLQSLGIRKTAAVDL*CVFKFQ
Trigger: TTGAAACTTGAAGACACACCAAAGATCAACAGCCGC...AGTCTTCCTTATACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CAAAGGAATCTCAATTTTCAAACTGTTCTTGTTCAAGGTATATTTGACCCGGCCCTATCAGAAGGGGGTTaGCATGCACACGTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: QRNLNFQTVLVQGIFDPALSEGG*HAHVSA
Trigger: GGCTGAAACGTGTGCATGCCAACCCCCTTCTGATAG...GGCCGGGTCAAATATACCTTGAACAAGAACAGTTTGAAAATTGAGATTCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCAGAGTTAACTGCTCCATaGTTTGGCCCATATTTCCAA +
Preference number: 2 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPELTAP*FGPYFQ
Trigger: TTGGAAATATGGGCCAAACCATGGAGCAGTTAACTC...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAAAAGTTGGTGTTCATCTaGACCCCACTCCTAGCGAAG +
Preference number: 2 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKKLVFI*TPLLAK
Trigger: CTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTT...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CAAAGGAATCTCAATTTTCAAACTGTTCTTGTTCAAGGTATATTTGACCCGGCCGCCATGCCACCCTCTTaGAAACTGTGGAGCCATAAG +
Preference number: 2 (lower is better)
Translates to: QRNLNFQTVLVQGIFDPAAMPPS*KLWSHK
Trigger: CTTATGGCTCCACAGTTTCCAAGAGGGTGGCATGGC...GGCCGGGTCAAATATACCTTGAACAAGAACAGTTTGAAAATTGAGATTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGAAAATGCCATCCTTCTaGGTTCAGAGACCTTCCGAG +
Preference number: 2 (lower is better)
Translates to: TPFICSSSPKFSKITQILKMPSF*VQRPSE
Trigger: CTCGGAAGGTCTCTGAACTCAGAAGGATGGCATTTT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR-3UTR TCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAAGGCCCATATTTCCAATaGCCCGCAGAATCAAATAGG +
Preference number: 2 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKGPYFQ*PAESNR
Trigger: CCTATTTGATTCTGCGGGTCATTGGAAATATGGGCC...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp AGCTCATTGCAACTATTAATTTGGAACCCACGTGCCGGAAAGTCATGTCTGTTTCTGCTTCGCACCTTCTaGTTGAGTTACAAACTTCAG +
Preference number: 2 (lower is better)
Translates to: SSLQLLIWNPRAGKSCLFLLRTF*LSYKLQ
Trigger: CTGAAGTTTGTAACTCAAGCAGAAGGTGCGAAGCAG...AAACAGACATGACTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAATGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp CAAAGGAATCTCAATTTTCAAACTGTTCTTGTTCAAGGTATATTTGACCCGGCCCACCTCAATCAGCTGTaGCAAGAGAGATGTGACTGC +
Preference number: 2 (lower is better)
Translates to: QRNLNFQTVLVQGIFDPAHLNQL*QERCDC
Trigger: GCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTG...GGCCGGGTCAAATATACCTTGAACAAGAACAGTTTGAAAATTGAGATTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTGATTCCCTTCTATTTTaGCTGAGGCTGGGTCAAGTG +
Preference number: 2 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFDSLLF*LRLGQV
Trigger: CACTTGACCCAGCCTCAGCCAAAATAGAAGGGAATC...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp GCTGTTGATCTTTGGTGTGTCTTCAAGTTTCAAAGTCTGTGTCACTaGTGCTACCATCCCATACTTATTCTTGTAGGAGAAAGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: AVDLWCVFKFQSLCH*CYHPILILVGERQE
Trigger: TTCCTGCCTTTCTCCTACAAGAATAAGTATGGGATGGTAGCACAAGTGACACAGACTTTGAAACTTGAAGACACACCAAAGATCAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp ATCAGTGATGGCTTTGTACTTTGGACACATTTCAGGATTGAAGACTaGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCA +
Preference number: 2 (lower is better)
Translates to: ISDGFVLWTHFRIED*SSGVNCSMVWPIFP
Trigger: TGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTCTTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATCACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTCAAAGAAGCGGCTGTTaGTCTTTGGTGTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPQRSGC*SLVCLQ
Trigger: TTGAAGACACACCAAAGATCAACAGCCGCTTCTTTG...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACGTTAATATCTGCCTGTaGAGGACTCCTCATCAACAT +
Preference number: 2 (lower is better)
Translates to: QESISIHMQALRIIGEIHVNICL*RTPHQH
Trigger: ATGTTGATGAGGAGTCCTTCACAGGCAGATATTAAC...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp AGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATTTCATTCGCACCTTCTGCTTaGGTTACAAACTTCAGGGTA +
Preference number: 2 (lower is better)
Translates to: RSPVISLQCSDCLCGQISFAPSA*VTNFRV
Trigger: TACCCTGAAGTTTGTAACTCAAGCAGAAGGTGCGAA...TGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTGGTGCCAGCTTTGGTaGAGGTCCAGTTCATATGTG +
Preference number: 2 (lower is better)
Translates to: IKTPFICSSSPKFSKITQWCQLW*RSSSYV
Trigger: CACATATGAACTGGACCTGCACCAAAGCTGGCACCA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR-3UTR GCA 90 bp GACTTGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCGCTCTCTGGATATTTTaGTCAGAGATGGTTAGTTTT +
Preference number: 2 (lower is better)
Translates to: DLSSGVNCSMVWPIFPMTALWIF*SEMVSF
Trigger: AAAACTAACCATCTCTGAGCAAAATATCCAGAGAGC...GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp AGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATTTCACTTCTGGCTTCTGCTTaGAAACGGGGTATGGAAATA +
Preference number: 2 (lower is better)
Translates to: RSPVISLQCSDCLCGQISLLASA*KRGMEI
Trigger: TATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAG...TGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACATGTTTATCATCTTTaGTATAGCCAAAGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPHVYHL*YSQSGP
Trigger: TGGACCACTTTGGCTATACCAAAGATGATAAACATG...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CAAAGGAATCTCAATTTTCAAACTGTTCTTGTTCAAGGTATATTTGACCCGGCCGTAATCCAGCTCCAGTaGGGAGTTCAAAGGCATTCT +
Preference number: 2 (lower is better)
Translates to: QRNLNFQTVLVQGIFDPAVIQLQ*GVQRHS
Trigger: AGAATGCCTTTGAACTCCCCACTGGAGCTGGATTAC...GGCCGGGTCAAATATACCTTGAACAAGAACAGTTTGAAAATTGAGATTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp TCATACTTTAGGGAAGCAGTATTTTTAATGATGCCACTTTGCAGATCAGAGGTGGTTCTCAATGAGAGGTaGGATCACCTCCGTTTTGGT +
Preference number: 2 (lower is better)
Translates to: SYFREAVFLMMPLCRSEVVLNER*DHLRFG
Trigger: ACCAAAACGGAGGTGATCCCACCTCTCATTGAGAAC...CACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCCTAAAGTATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp TCATACTTTAGGGAAGCAGTATTTTTAATGATGCCACTTTGCAGATCAGAGGTGTGCTGTAGACATTCGTaGAGAGGTCTAGAACACCCA +
Preference number: 2 (lower is better)
Translates to: SYFREAVFLMMPLCRSEVCCRHS*RGLEHP
Trigger: TGGGTGTTCTAGACCTCTCCACGAATGTCTACAGCA...CACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCCTAAAGTATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CAA 90 bp GCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTaGCCACCAAAAGGCAAAGGAATCTCAATTTTCAAACTGTTCTTG +
Preference number: 2 (lower is better)
Translates to: AGVLTVSNIFRSLED*PPKGKGISIFKLFL
Trigger: CAAGAACAGTTTGAAAATTGAGATTCCTTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACAGTACAAAGCTTTGTTaGCACTGTCTGGGAAAAATC +
Preference number: 2 (lower is better)
Translates to: QESISIHMQALRIIGEIHSTKLC*HCLGKI
Trigger: GATTTTTCCCAGACAGTGTCAACAAAGCTTTGTACT...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR TCA 90 bp AGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATTTCATGTTCAAGGTATATTTaGCCCGGCCATCGCTTTTTA +
Preference number: 2 (lower is better)
Translates to: RSPVISLQCSDCLCGQISCSRYI*PGHRFL
Trigger: TAAAAAGCGATGGCCGGGTCAAATATACCTTGAACA...TGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp GAAGACTCCCAGATGCCTTCTGAAGCCATGAGCTCATTGCAACTATTAATTTGGGCTCTCTGGATATTTTaGTCAGAGATGGTTAGTTTT +
Preference number: 2 (lower is better)
Translates to: EDSQMPSEAMSSLQLLIWALWIF*SEMVSF
Trigger: AAAACTAACCATCTCTGAGCAAAATATCCAGAGAGC...CCAAATTAATAGTTGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACGAAGTCCATGACAGTTaGAAGTTGAGATTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: QESISIHMQALRIIGEIHEVHDS*KLRFFQ
Trigger: CTGAAAGAATCTCAACTTCCAACTGTCATGGACTTC...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 90 bp ATTAACTCTGAGGATTGTTCCGAGGTCAACATCAAAATCCGGAATTaGGACTTCACTGGACAAGGTCATACTCTGCCGATTATATTTGAA +
Preference number: 2 (lower is better)
Translates to: INSEDCSEVNIKIRN*DFTGQGHTLPIIFE
Trigger: TTCAAATATAATCGGCAGAGTATGACCTTGTCCAGTGAAGTCCAAATTCCGGATTTTGATGTTGACCTCGGAACAATCCTCAGAGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CAA 90 bp GTTTTGAAGAGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTaGTGTGGTCAAATTTCATTTCAGCATATGAGCCCATCATGTCAT +
Preference number: 2 (lower is better)
Translates to: VLKRSPVISLQCSDC*CGQISFQHMSPSCH
Trigger: ATGACATGATGGGCTCATATGCTGAAATGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCTCTTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTAGTCTGTGTCACTTGTaGTACCATCCCATACTTATT +
Preference number: 2 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPSLCHL*YHPILI
Trigger: AATAAGTATGGGATGGTAGCACAAGTGACACAGACT...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCAAGATATTGGCAATATaGGAAGCCACAAAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: SNFLVLNVQGESVRRFALKILAI*EATKFF
Trigger: GAAGAACTTTGTGGCTTCCCATATTGCCAATATCTT...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp AGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATTTCAGACAAGGTCATACTCTaGCGATTATATTTGAATGTC +
Preference number: 2 (lower is better)
Translates to: RSPVISLQCSDCLCGQISDKVIL*RLYLNV
Trigger: GACATTCAAATATAATCGGCAGAGTATGACCTTGTC...TGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR GCA 90 bp AGTTCTTATACTTCCCATTGGTGTCAGATTTTAAAGTCAGCTCGTAGTTCTCATGAAGAGACTCTGAACTaGCCATCAATCTTGACTTCT +
Preference number: 2 (lower is better)
Translates to: SSYTSHWCQILKSARSSHEETLN*PSILTS
Trigger: AGAAGTCAAGATTGATGGGCAGTTCAGAGTCTCTTC...ATGAGAACTACGAGCTGACTTTAAAATCTGACACCAATGGGAAGTATAAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTAAGATATTGGCAATATaGGAAGCCACAAAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPKILAI*EATKFF
Trigger: GAAGAACTTTGTGGCTTCCCATATTGCCAATATCTT...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR GCA 90 bp ATATTCGAATCTAGAAATTTGTGGCGTAGAGACCCATCACATGATAGTGTGAACCCATTTACCATATCCTaGTCATGTTTATCATCTTTG +
Preference number: 2 (lower is better)
Translates to: IFESRNLWRRDPSHDSVNPFTIS*SCLSSL
Trigger: CAAAGATGATAAACATGAGCAGGATATGGTAAATGG...GTTCACACTATCATGTGATGGGTCTCTACGCCACAAATTTCTAGATTCGAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR TCA 72 bp ACAAGGTGGCTCGGCTGCGCTGATCCCTCGCCATGTTaGAGATCTCTCGCAGCTGCTGTGCTGAGGGCTCGG +
Preference number: 3 (lower is better)
Translates to: TRWLGCADPSPC*RSLAAAVLRAR
Trigger: CCGAGCCCTCAGCACAGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 72 bp GCGTGGCTCAGCGCATACAAGGTGGCTCGGCTGCGCTaGTCCCTCGCCATGTTGAAGATCTCTCGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: AWLSAYKVARLR*SLAMLKISRSC
Trigger: GCAGCTGCGAGAGATCTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGAGCCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 72 bp TGTCCCCGGTCAGCGGATAGTAGGAGGCGGAGTCTGTaGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGT +
Preference number: 3 (lower is better)
Translates to: CPRSADSRRRSL*SWRWSKRLRCS
Trigger: ACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGCTGACCGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 72 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTaGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: ADSRRRSLWSWR*SKRLRCSNSGQ
Trigger: CTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGAGAACCTCCTGGTCCTaGTCTTTAGGCTCCATTTTC +
Preference number: 3 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQERTSWS*SLGSIF
Trigger: GAAAATGGAGCCTAAAGACAAGGACCAGGAGGTTCT...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 72 bp TTCCTGATGACCTCTCCAATCATCTGGGGGATCCCCTaGAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCC +
Preference number: 3 (lower is better)
Translates to: FLMTSPIIWGIP*RVRAPIRSSFP
Trigger: GGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAGATGATTGGAGAGGTCATCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 72 bp GGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTaGGGTGCAGTAATTCAGGCCAGGAAAGACTTGCTT +
Preference number: 3 (lower is better)
Translates to: GGVCGAGVGVSA*GAVIQARKDLL
Trigger: AAGCAAGTCTTTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACAAGAGGTGTTGCTCCTaGCAGATGGCTTCTGCCACA +
Preference number: 3 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHKRCCS*QMASAT
Trigger: TGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCTT...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 72 bp CAGAGTCAGCCTTCATGTGGTAACGAGCCCGAAGGCTaGAATGGTCTGTGCTGGTGTTGCCACCACTGTAGG +
Preference number: 3 (lower is better)
Translates to: QSQPSCGNEPEG*NGLCWCCHHCR
Trigger: CCTACAGTGGTGGCAACACCAGCACAGACCATTTCAGCCTTCGGGCTCGTTACCACATGAAGGCTGACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CCA 72 bp TGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTaGAGCACTGAGGCTGTCCACACTGAACCAAGGCTT +
Preference number: 3 (lower is better)
Translates to: WHAHVSATGGCE*STEAVHTEPRL
Trigger: AAGCCTTGGTTCAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 72 bp TCCAGACCCGACTCGTGGAAGAAGTTGGTGTTCATCTaGACCCCACTCCTAGCGAAGTCCGGAATGATGATG +
Preference number: 3 (lower is better)
Translates to: SRPDSWKKLVFI*TPLLAKSGMMM
Trigger: CATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGGTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACCCAAAGAAGCGGCTGTaGATCTTTGGTGTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHPKKRL*IFGVSS
Trigger: TGAAGACACACCAAAGATCAACAGCCGCTTCTTTGG...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTGGAGGTGATGTGGATTaGGTGCTCTCAAATGCGAGG +
Preference number: 3 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFGGDVD*VLSNAR
Trigger: CCTCGCATTTGAGAGCACCAAATCCACATCACCTCC...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCCCCAGTGCAGTCATCTaGAATCTGTTCCATCAGGTA +
Preference number: 3 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSPSAVI*NLFHQV
Trigger: TACCTGATGGAACAGATTCAAGATGACTGCACTGGG...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGCCCATGTTCTGGAGGTaGAACTCCTTCAGGCTATTG +
Preference number: 3 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRPMFWR*NSFRLL
Trigger: CAATAGCCTGAAGGAGTTCAACCTCCAGAACATGGG...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR GCA 72 bp TCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTaGACGTCCACAGTCCCAGCTACTTGGGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: STKDTQISRACW*TSTVPATWEAE
Trigger: CTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
3UTR GCA 72 bp GGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTaGTTCATCACTGAGGCCTCTCAGCTCAGTAACCAG +
Preference number: 3 (lower is better)
Translates to: GHLNQLWQERCD*FITEASQLSNQ
Trigger: CTGGTTACTGAGCTGAGAGGCCTCAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 72 bp AGGCCAGGAAAGACTTGCTTGCAAACTGACCAGGACTaGCTGTTCTCAATGAGAGGTGGGATCACCTCCGTT +
Preference number: 3 (lower is better)
Translates to: RPGKTCLQTDQD*LFSMRGGITSV
Trigger: AACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAGTCCTGGTCAGTTTGCAAGCAAGTCTTTCCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 72 bp AGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTaGAGTAATTCAGGCCAGGAAAGACTTGCTTGCAAA +
Preference number: 3 (lower is better)
Translates to: SLWSWRWSKRLR*SNSGQERLACK
Trigger: TTTGCAAGCAAGTCTTTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 72 bp CACCAAGGCTCTGTCCTCTCTCTGGAGCTCATAGGTTaGGCTGACAGAATACTGCTCAATCTCTCCTGTAGG +
Preference number: 3 (lower is better)
Translates to: HQGSVLSLELIG*ADRILLNLSCR
Trigger: CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGAGAGGACAGAGCCTTGGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 72 bp AGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTaGTTGCAAACGGGGTATGGAAATAACACCCTTGAT +
Preference number: 3 (lower is better)
Translates to: RRPVGEDLTSGF*LQTGYGNNTLD
Trigger: ATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 72 bp TGCCACCACTGTAGGAGGCGGACCAGTTGTACAAGTTaGTGTAGACATTCGTGGAGAGGTCTAGAACACCCA +
Preference number: 3 (lower is better)
Translates to: CHHCRRRTSCTS*CRHSWRGLEHP
Trigger: TGGGTGTTCTAGACCTCTCCACGAATGTCTACAGCAACTTGTACAACTGGTCCGCCTCCTACAGTGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CCA 72 bp GTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTaGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: VSTKDTQISRAC*CTSTVPATWEA
Trigger: AGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
3UTR CCA 72 bp AGGCGGACCAGTTGTACAAGTTGCTGTAGACATTCGTaGAGAGGTCTAGAACACCCAGGAGAGGCACTTGCA +
Preference number: 3 (lower is better)
Translates to: RRTSCTSCCRHS*RGLEHPGEALA
Trigger: TGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGTCTACAGCAACTTGTACAACTGGTCCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp TGTAGACATTCGTGGAGAGGTCTAGAACACCCAGGAGAGGCACTTGCAGTTGATGGAGGTGATGTGGATTaGGTGCTCTCAAATGCGAGG +
Preference number: 3 (lower is better)
Translates to: CRHSWRGLEHPGEALAVDGGDVD*VLSNAR
Trigger: CCTCGCATTTGAGAGCACCAAATCCACATCACCTCC...ATCAACTGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTCTCTGCCGATTATATTaGAATGTCATGGTAGCCTCA +
Preference number: 3 (lower is better)
Translates to: RSSLAGDQWARISLLASALCRLY*NVMVAS
Trigger: TGAGGCTACCATGACATTCAAATATAATCGGCAGAG...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGTGTTTCTCCAGATCCTaGCACATTGTAGGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRCFSRS*HIVGKQ
Trigger: CTGCTTTCCTACAATGTGCAAGGATCTGGAGAAACA...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR GCA 72 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATaGTGGTGCACGTCCACAGTCCCAGCTACTTGGGAG +
Preference number: 3 (lower is better)
Translates to: LVSTKDTQISRA*WCTSTVPATWE
Trigger: CTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
3UTR-3UTR CAA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACAAGGCAGGAGAATTGCTaGAACCCGGAAGGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: LVSTKDTQISRACWCTSTRQENC*NPEGRV
Trigger: AACTCTGCCTTCCGGGTTCAAGCAATTCTCCTGCCT...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
3UTR-3UTR CAA 90 bp GCTTCATCACTGAGGCCTCTCAGCTCAGTAACCAGCTTATTGAAGAGATTAGCTCAGCTTCGGCCTGCTTaGGAGGTGATGTGGATTTGG +
Preference number: 3 (lower is better)
Translates to: ASSLRPLSSVTSLLKRLAQLRPA*EVMWIW
Trigger: CCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTG...AGCTAATCTCTTCAATAAGCTGGTTACTGAGCTGAGAGGCCTCAGTGATGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGCTTCCGGGACTTCTTaGGATTTCAAATCTTTAATC +
Preference number: 3 (lower is better)
Translates to: RSSLAGDQWARISLLASAASGTS*DFKSLI
Trigger: GATTAAAGATTTGAAATCCAAAGAAGTCCCGGAAGC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCTCCACTGAGCAGCTaGACTGGTCTCTTTGGGGAA +
Preference number: 3 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPPPLSS*TGLFGE
Trigger: TTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGG...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 72 bp ATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACATaGGCCTCCAGACCCGACTCGTGGAAGAAGTTGGTG +
Preference number: 3 (lower is better)
Translates to: MINFSFPAFRAT*ASRPDSWKKLV
Trigger: CACCAACTTCTTCCACGAGTCGGGTCTGGAGGCTCATGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 72 bp GCAGTAATTCAGGCCAGGAAAGACTTGCTTGCAAACTaGCCAGGACTGCCTGTTCTCAATGAGAGGTGGGAT +
Preference number: 3 (lower is better)
Translates to: AVIQARKDLLAN*PGLPVLNERWD
Trigger: ATCCCACCTCTCATTGAGAACAGGCAGTCCTGGTCAGTTTGCAAGCAAGTCTTTCCTGGCCTGAATTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 72 bp GGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTCTaGATCATCAGTGATGGCTTTGTACTTTGGACACAT +
Preference number: 3 (lower is better)
Translates to: GSIFRRAWMAAF*IISDGFVLWTH
Trigger: ATGTGTCCAAAGTACAAAGCCATCACTGATGATCCAGAAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp GACTTGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCTCTATCAGAAGGGGGTaGGCATGCACACGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: DLSSGVNCSMVWPIFPMTSIRRG*ACTRFS
Trigger: GCTGAAACGTGTGCATGCCAACCCCCTTCTGATAGA...GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACGTCTGGGAAAAATCCTaGCTTCCCAAAAAGAGCTTC +
Preference number: 3 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHVWEKS*LPKKSF
Trigger: GAAGCTCTTTTTGGGAAGCAAGGATTTTTCCCAGAC...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGCAGTACAAAGCTTTGTaGACACTGTCTGGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRQYKAL*TLSGKN
Trigger: ATTTTTCCCAGACAGTGTCAACAAAGCTTTGTACTG...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCCAGACACGGAGGGTTTaGCCACCAGTTCAGCCTGCA +
Preference number: 3 (lower is better)
Translates to: SNFLVLNVQGESVRRFALQTRRV*PPVQPA
Trigger: TGCAGGCTGAACTGGTGGCAAAACCCTCCGTGTCTG...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp TGTAGACATTCGTGGAGAGGTCTAGAACACCCAGGAGAGGCACTTGCAGTTGATACCAAATGTAATGTGTaGCCTCCACTGAGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: CRHSWRGLEHPGEALAVDTKCNV*PPLSSL
Trigger: CAAGCTGCTCAGTGGAGGCAACACATTACATTTGGT...ATCAACTGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp GAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTTGGAGGCTATTGAGGTGGTCTaGCAAAGTCTGGGTATAAGG +
Preference number: 3 (lower is better)
Translates to: EGEGSIFISSCYLVGALEAIEVV*QSLGIR
Trigger: CCTTATACCCAGACTTTGCAAGACCACCTCAATAGC...CTCCAAGGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGGCACCACTATTAATTTaGTCAGTGCCTAAGATGTCA +
Preference number: 3 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRAPLLI*SVPKMS
Trigger: TGACATCTTAGGCACTGACAAAATTAATAGTGGTGC...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR TCA 72 bp GAGAGGTCTAGAACACCCAGGAGAGGCACTTGCAGTTaGTACAACTTGGGAATGGTAAAAGTAGGGACTTGG +
Preference number: 3 (lower is better)
Translates to: ERSRTPRRGTCS*YNLGMVKVGTW
Trigger: CCAAGTCCCTACTTTTACCATTCCCAAGTTGTATCAACTGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 72 bp TGTGTTGCCTCCACTGAGCAGCTTGACTGGTCTCTTTaGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: CVASTEQLDWSL*GRNDKLQLPSF
Trigger: AAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGGCAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCACAGCTTCGGCCTGCTTaGGAGGTGATGTGGATTTGG +
Preference number: 3 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPQLRPA*EVMWIW
Trigger: CCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTG...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAACAGACACGGAGGGTTTaGCCACCAGTTCAGCCTGCA +
Preference number: 3 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKQTRRV*PPVQPA
Trigger: TGCAGGCTGAACTGGTGGCAAAACCCTCCGTGTCTG...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGTCAGTAACCAGCTTATaGAAGAGATTAGCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: SLELIGCADRILLNLSCRSVTSL*KRLALW
Trigger: CCAGAGAGCTAATCTCTTCAATAAGCTGGTTACTGA...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCATCTATCAGAAGGGGGTaGGCATGCACACGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPSIRRG*ACTRFS
Trigger: GCTGAAACGTGTGCATGCCAACCCCCTTCTGATAGA...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673882.1
3UTR-3UTR CAA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGAAAGAGCTTCCAATGTaGGCTCAAAGCCTTTTCCTT +
Preference number: 3 (lower is better)
Translates to: SLELIGCADRILLNLSCRKELPM*AQSLFL
Trigger: AAGGAAAAGGCTTTGAGCCAACATTGGAAGCTCTTT...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGTCTGGGAAAAATCCTaGCTTCCCAAAAAGAGCTTC +
Preference number: 3 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPVWEKS*LPKKSF
Trigger: GAAGCTCTTTTTGGGAAGCAAGGATTTTTCCCAGAC...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAACAGTACAAAGCTTTGTaGACACTGTCTGGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQQYKAL*TLSGKN
Trigger: ATTTTTCCCAGACAGTGTCAACAAAGCTTTGTACTG...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTCCTCCACTGAGCAGCTaGACTGGTCTCTTTGGGGAA +
Preference number: 3 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFPPLSS*TGLFGE
Trigger: TTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGG...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACTTCGCACCTTCTGCTaGAGTTACAAACTTCAGGGT +
Preference number: 3 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPLRTFC*SYKLQG
Trigger: ACCCTGAAGTTTGTAACTCAAGCAGAAGGTGCGAAG...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR GCA 72 bp TTCAGTTCCTGGAGAGTCTTCAAAACAGCTTCGGCCTaGTTTGGAGGTGATGTGGATTTGGTGCTCTCAAAT +
Preference number: 3 (lower is better)
Translates to: FSSWRVFKTASA*FGGDVDLVLSN
Trigger: ATTTGAGAGCACCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTTGAAGACTCTCCAGGAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTAAGAGGTGTTGCTCCTaGCAGATGGCTTCTGCCACA +
Preference number: 3 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFKRCCS*QMASAT
Trigger: TGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCTT...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTCCCAGTGCAGTCATCTaGAATCTGTTCCATCAGGTA +
Preference number: 3 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFPSAVI*NLFHQV
Trigger: TACCTGATGGAACAGATTCAAGATGACTGCACTGGG...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTAGATTCCCTTCTATTTaGGCTGAGGCTGGGTCAAGT +
Preference number: 3 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFRFPSI*AEAGSS
Trigger: ACTTGACCCAGCCTCAGCCAAAATAGAAGGGAATCT...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 72 bp CATTTCAGGATTGAAGACTTGAGTTCTGGAGTTAACTaGTCCATGGTTTGGCCCATATTTCCAATGACCCGC +
Preference number: 3 (lower is better)
Translates to: HFRIEDLSSGVN*SMVWPIFPMTR
Trigger: GCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTCTTCAATCCTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTCAAAGTCTGTGTCACTaGTGCTACCATCCCATACTT +
Preference number: 3 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFQSLCH*CYHPIL
Trigger: AAGTATGGGATGGTAGCACAAGTGACACAGACTTTG...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACCCAAAGAAGCGGCTGTaGATCTTTGGTGTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: QESISIHMQALRIIGEIHPKKRL*IFGVSS
Trigger: TGAAGACACACCAAAGATCAACAGCCGCTTCTTTGG...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACAGATTCCCTTCTATTTaGGCTGAGGCTGGGTCAAGT +
Preference number: 3 (lower is better)
Translates to: QESISIHMQALRIIGEIHRFPSI*AEAGSS
Trigger: ACTTGACCCAGCCTCAGCCAAAATAGAAGGGAATCT...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATGACACCATCAGGAACTaGACCATTAACCCAGTACAA +
Preference number: 3 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHDTIRN*TINPVQ
Trigger: TTGTACTGGGTTAATGGTCAAGTTCCTGATGGTGTC...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAAGGGATCACCTCCGTTTaGGTGGTAGAGACCAAATGT +
Preference number: 3 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKGITSV*VVETKC
Trigger: ACATTTGGTCTCTACCACCAAAACGGAGGTGATCCC...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR GCA 72 bp AGGTCCAGTTCATATGTGCTTCTGCTTATAGTCTACTaGCTACTGCAAGGCTGGCTCACTGTATGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: RSSSYVLLLIVY*LLQGWLTVWFY
Trigger: ATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAGAAGCACATATGAACTGGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR GCA 72 bp TCCGGAATTTGGACTTCACTGGACAAGGTCATACTCTaGCGATTATATTTGAATGTCATGGTAGCCTCAGTC +
Preference number: 3 (lower is better)
Translates to: SGIWTSLDKVIL*RLYLNVMVASV
Trigger: GACTGAGGCTACCATGACATTCAAATATAATCGGCAGAGTATGACCTTGTCCAGTGAAGTCCAAATTCCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCATCATCAGTGATGGCTTaGTACTTTGGACACATTTCA +
Preference number: 3 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPSSVMA*YFGHIS
Trigger: TGAAATGTGTCCAAAGTACAAAGCCATCACTGATGA...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTAGAACCTCCTGGTCCTaGTCTTTAGGCTCCATTTTC +
Preference number: 3 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFRTSWS*SLGSIF
Trigger: GAAAATGGAGCCTAAAGACAAGGACCAGGAGGTTCT...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp AGCTCATTGCAACTATTAATTTGGAACCCACGTGCCGGAAAGTCATGTCTGTTTAGTTCAGCCTGCATGTaGGCTACTTCCAGTTTTACT +
Preference number: 3 (lower is better)
Translates to: SSLQLLIWNPRAGKSCLFSSACM*ATSSFT
Trigger: AGTAAAACTGGAAGTAGCCAACATGCAGGCTGAACT...AAACAGACATGACTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAATGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 72 bp GATATTCCATCTTGGCCAATCCTTAGTGTCGCCTTGTaGGCACCACTATTAATTTTGTCAGTGCCTAAGATG +
Preference number: 3 (lower is better)
Translates to: DIPSWPILSVAL*APLLILSVPKM
Trigger: CATCTTAGGCACTGACAAAATTAATAGTGGTGCTCACAAGGCGACACTAAGGATTGGCCAAGATGGAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CCA 72 bp GCAGCTTTCTGGATCATCAGTGATGGCTTTGTACTTTaGACACATTTCAGGATTGAAGACTTGAGTTCTGGA +
Preference number: 3 (lower is better)
Translates to: AAFWIISDGFVL*THFRIEDLSSG
Trigger: TCCAGAACTCAAGTCTTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATCACTGATGATCCAGAAAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp TCATACTTTAGGGAAGCAGTATTTTTAATGATGCCACTTTGCAGATCAGAGGTGACTTCTGGCTTCTGCTaGCAAACGGGGTATGGAAAT +
Preference number: 3 (lower is better)
Translates to: SYFREAVFLMMPLCRSEVTSGFC*QTGYGN
Trigger: ATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGT...CACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCCTAAAGTATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp AGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATTTCAACGCAGCAGTGCATTTaGCTTAGAGAAGGTCATATC +
Preference number: 3 (lower is better)
Translates to: RSPVISLQCSDCLCGQISTQQCI*LREGHI
Trigger: GATATGACCTTCTCTAAGCAAAATGCACTGCTGCGT...TGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR TCA 72 bp GAAATTTGTGGCGTAGAGACCCATCACATGATAGTGTaGACGTATTCTTGTGGTCATATGTTGTTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: EICGVETHHMIV*TYSCGHMLFLQ
Trigger: CTGGAGAAACAACATATGACCACAAGAATACGTTCACACTATCATGTGATGGGTCTCTACGCCACAAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR TCA 72 bp GAGCCCATCATGTCATTTGAGAGCTTAAGTCCTTCTTaGCTGACCTTGAAGTTGAAAATGTTTTTGCTGTCG +
Preference number: 3 (lower is better)
Translates to: EPIMSFESLSPS*LTLKLKMFLLS
Trigger: CGACAGCAAAAACATTTTCAACTTCAAGGTCAGTCAAGAAGGACTTAAGCTCTCAAATGACATGATGGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CCA 72 bp TCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTaGTCAAATTTCATTTCAGCATATGAGCCCATCATG +
Preference number: 3 (lower is better)
Translates to: SSDKPAMFRLFV*SNFISAYEPIM
Trigger: CATGATGGGCTCATATGCTGAAATGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAATCTGAGTTCAAGATATaGGCAATATGGGAAGCCACA +
Preference number: 3 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKSEFKI*AIWEAT
Trigger: TGTGGCTTCCCATATTGCCAATATCTTGAACTCAGA...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTTCTGAGTTCAAGATATaGGCAATATGGGAAGCCACA +
Preference number: 3 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFSEFKI*AIWEAT
Trigger: TGTGGCTTCCCATATTGCCAATATCTTGAACTCAGA...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAAAAAGAGCTTCCAATGTaGGCTCAAAGCCTTTTCCTT +
Preference number: 3 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKKELPM*AQSLFL
Trigger: AAGGAAAAGGCTTTGAGCCAACATTGGAAGCTCTTT...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACGCTTCCGGGACTTCTTaGGATTTCAAATCTTTAATC +
Preference number: 3 (lower is better)
Translates to: QESISIHMQALRIIGEIHASGTS*DFKSLI
Trigger: GATTAAAGATTTGAAATCCAAAGAAGTCCCGGAAGC...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp AGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATTTCAATTGCAACTATTAATTaGGAACCCACGTGCCGGAAA +
Preference number: 3 (lower is better)
Translates to: RSPVISLQCSDCLCGQISIATIN*EPTCRK
Trigger: TTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAAT...TGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR-3UTR CAA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAATGTCACAACTTCTGCTaGAGTTACAAACTTCAGGGT +
Preference number: 3 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKCHNFC*SYKLQG
Trigger: ACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACA...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673882.1
3UTR-3UTR CAA 90 bp AGAAACAGATTTGTAGAGTTGATAGTTCCGAGAGAATTTTCTGAAGTCCATGACCAAAGTCTGTGTCACTaGTGCTACCATCCCATACTT +
Preference number: 3 (lower is better)
Translates to: RNRFVELIVPREFSEVHDQSLCH*CYHPIL
Trigger: AAGTATGGGATGGTAGCACAAGTGACACAGACTTTG...GTCATGGACTTCAGAAAATTCTCTCGGAACTATCAACTCTACAAATCTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR-3UTR CAA 90 bp ATATTCGAATCTAGAAATTTGTGGCGTAGAGACCCATCACATGATAGTGTGAACTCAGTAACCAGCTTATaGAAGAGATTAGCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: IFESRNLWRRDPSHDSVNSVTSL*KRLALW
Trigger: CCAGAGAGCTAATCTCTTCAATAAGCTGGTTACTGA...GTTCACACTATCATGTGATGGGTCTCTACGCCACAAATTTCTAGATTCGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CCA 72 bp GATCTTGGATATCCAATTCTTCTGAGTTCAAGATATTaGCAATATGGGAAGCCACAAAGTTCTTCACTTGCT +
Preference number: 3 (lower is better)
Translates to: DLGYPILLSSRY*QYGKPQSSSLA
Trigger: AGCAAGTGAAGAACTTTGTGGCTTCCCATATTGCCAATATCTTGAACTCAGAAGAATTGGATATCCAAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR TCA 72 bp CGAGAGAATTTTCTGAAGTCCATGACAGTTGGAAGTTaGGATTCTTTCAGAGCTTCTTTCACTAACTTTTTC +
Preference number: 3 (lower is better)
Translates to: RENFLKSMTVGS*DSFRASFTNFF
Trigger: GAAAAAGTTAGTGAAAGAAGCTCTGAAAGAATCTCAACTTCCAACTGTCATGGACTTCAGAAAATTCTCTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CCA 72 bp ATATCCAATTCTTCTGAGTTCAAGATATTGGCAATATaGGAAGCCACAAAGTTCTTCACTTGCTCATTCTGT +
Preference number: 3 (lower is better)
Translates to: ISNSSEFKILAI*EATKFFTCSFC
Trigger: ACAGAATGAGCAAGTGAAGAACTTTGTGGCTTCCCATATTGCCAATATCTTGAACTCAGAAGAATTGGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGGGATCCCCTGCAGAGTaGGGGCACCCATCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQEGSPAE*GHPSEA
Trigger: TGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCC...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGGGGCCACCAGGTAGGTaGCCACATCTATCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQEGPPGR*PHLSEG
Trigger: CCCTTCTGATAGATGTGGTCACCTACCTGGTGGCCC...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGAAGATCTCTCGCAGCTaGTGTGCTGAGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRKISRS*CAEGSG
Trigger: CCCCGAGCCCTCAGCACAGCAGCTGCGAGAGATCTT...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGAGGACTGGCTGCTGCTaGTCAGAGTTGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRRTGCC*SELTRG
Trigger: GCCCCTTGTCAACTCTGATCAGCAGCAGCCAGTCCT...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGACTGGAGGATGTGAGTaGAGCACTGAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQETGGCE*STEAVH
Trigger: GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGT...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGAGGAGGCGGAGTCTGTaGAGCTGGCGTTGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRRRRSL*SWRWSK
Trigger: CTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCT...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGCTGGAATGGCCAGCTTaGGCTCATACCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRLEWPA*AHTWTW
Trigger: CCATGTCCAGGTATGAGCTCAAGCTGGCCATTCCAG...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGGATCCCTCGCCATGTTaGAGATCTCTCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRDPSPC*RSLAAA
Trigger: AGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATC...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGTGGCTCGGCTGCGCTaGTCCCTCGCCATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASAVARLR*SLAMLK
Trigger: CTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCAC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGGCCATGCCACCCTCTTaGAAACTGTGGAGCCATAAG +
Preference number: 4 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQEAMPPS*KLWSHK
Trigger: CTTATGGCTCCACAGTTTCCAAGAGGGTGGCATGGC...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGCCCACAGACTTGAAGTaGAGGGCTGGTGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQEPTDLK*RAGVLT
Trigger: TGTTAGGACACCAGCCCTCCACTTCAAGTCTGTGGG...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCCTGTGCGGATGGGCTTaGAGCGATCACACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSLCGWA*SDHTAP
Trigger: TGGGGCAGTGTGATCGCTTCAAGCCCATCCGCACAG...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAAGCTGCTGATCAGAGTTaGCAAGGGGCGGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: LWSWRWSKRLRCSNSGQEAADQS*QGAGHA
Trigger: GGCATGACCCGCCCCTTGTCAACTCTGATCAGCAGC...TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCGCGTCCAGTGTGTACTaGCAGGACTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSASSVY*QDWLLL
Trigger: CAGCAGCAGCCAGTCCTGTCAGTACACACTGGACGC...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCACAAGGTGGCTCGGCTaGGCTGATCCCTCGCCATGT +
Preference number: 4 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSTRWLG*ADPSPC
Trigger: ACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGT...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGCTGGAGCTCATAGGTTaGGCTGACAGAATACTGCTC +
Preference number: 4 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQELELIG*ADRILL
Trigger: GAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAG...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGCTGTTATCTGGTTGGTaGCTTGGAGGTAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQELLSGW*LGGRRS
Trigger: ACTCCTCCTACCTCCAAGGCACCAACCAGATAACAG...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGTGCGGAGGTAGGCTCTaGCTTCCGGGACTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLCGGRL*LPGLLW
Trigger: CCAAAGAAGTCCCGGAAGCCAGAGCCTACCTCCGCA...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACAGGACTGGCTGCTGCTaGTCAGAGTTGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHRTGCC*SELTRG
Trigger: GCCCCTTGTCAACTCTGATCAGCAGCAGCCAGTCCT...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGGGCCTGCTTTGGAGGTaGTGTGGATTTGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLGLLWR*CGFGAL
Trigger: GAGAGCACCAAATCCACATCACCTCCAAAGCAGGCC...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGGTGGCTCGGCTGCGCTaGTCCCTCGCCATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLVARLR*SLAMLK
Trigger: CTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCAC...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGTCTTATGATAGTTGTTaGCCGCGTGGCTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRSYDSC*PRGSAH
Trigger: ATGCGCTGAGCCACGCGGTCAACAACTATCATAAGA...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGCTCGATGAGGTCAGCTaGAGCAAATCCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRLDEVS*SKSKGS
Trigger: ACTGCCTTTGGATTTGCTTCAGCTGACCTCATCGAG...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGGCTTTTAGGGCAACATaGGCCTCCAGACCCGACTCG +
Preference number: 4 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLAFRAT*ASRPDS
Trigger: CGAGTCGGGTCTGGAGGCTCATGTTGCCCTAAAAGC...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGACTCCTTCAGGCTATTaGGGTGGTCTTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQETPSGY*GGLAKS
Trigger: AGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGT...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGGAATCCCACAGACTTaGAGTGGAGGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASAGIPQT*SGGLVS
Trigger: GGACACCAGCCCTCCACTTCAAGTCTGTGGGATTCC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGCCAGTGATAGCTCTGTaGGGGCGGCTTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLPVIAL*GRLSHP
Trigger: TGGATGGGAAAGCCGCCCTCACAGAGCTATCACTGG...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGGGCAGGAGAATTGCTTaGACCCGGAAGGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLGRRIA*TRKAEL
Trigger: CAACTCTGCCTTCCGGGTTCAAGCAATTCTCCTGCC...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGAGAGGTGTTGCTCCTTaGAGATGGCTTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRRGVAP*RWLLPH
Trigger: ATGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCT...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGGCGCTGACAGAATACTaGTCAATCTCTCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRALTEY*SISPVG
Trigger: GCCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGC...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGTCTTTCAGGGTGCACTaGCTGGTCTTCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRSFRVH*LVFRMK
Trigger: CTTCATCCTGAAGACCAGCCAGTGCACCCTGAAAGA...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCTGCGGAGGTAGGCTCTaGCTTCCGGGACTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSCGGRL*LPGLLW
Trigger: CCAAAGAAGTCCCGGAAGCCAGAGCCTACCTCCGCA...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGACTTCCGGAGGTGCTTaGATCGGGTCGCATCTTTTG +
Preference number: 4 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLTSGGA*IGSHLL
Trigger: CAAAAGATGCGACCCGATTCAAGCACCTCCGGAAGT...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCAACGAGCCCGAAGGCTaGAATGGTCTGTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSNEPEG*NGLCWC
Trigger: ACACCAGCACAGACCATTTCAGCCTTCGGGCTCGTT...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGATACCTGGACATGGCTaGAGCAAACTCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRIPGHG*SKLLRV
Trigger: AACTCTGAGGAGTTTGCTGCAGCCATGTCCAGGTAT...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCGCGTCCAGTGTGTACTaGCAGGACTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVASSVY*QDWLLL
Trigger: CAGCAGCAGCCAGTCCTGTCAGTACACACTGGACGC...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGCAAAGAAGCGGCTGTTaGTCTTTGGTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRQRSGC*SLVCLQ
Trigger: TTGAAGACACACCAAAGATCAACAGCCGCTTCTTTG...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTCCAAGGCTTGTAAAGTaGTGGGGCTGGACACCTCAA +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASAPRLVK*WGWTPQ
Trigger: TTGAGGTGTCCAGCCCCATCACTTTACAAGCCTTGG...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGAGAGGCACTTGCAGTTaGTACAACTTGGGAATGGTA +
Preference number: 4 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRRGTCS*YNLGMV
Trigger: TACCATTCCCAAGTTGTATCAACTGCAAGTGCCTCT...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCAAGATCTCTCGCAGCTaGTGTGCTGAGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GGEGEGSIFISSCYLVGAKISRS*CAEGSG
Trigger: CCCCGAGCCCTCAGCACAGCAGCTGCGAGAGATCTT...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCACAAGGTGGCTCGGCTaGGCTGATCCCTCGCCATGT +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVTRWLG*ADPSPC
Trigger: ACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGT...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp ATTGTAGGAAAGCAGGTCAACCACAGAGTCAGCCTTCATGTGGTAACGAGCCCGACAAGGTGGCTCGGCTaGGCTGATCCCTCGCCATGT +
Preference number: 4 (lower is better)
Translates to: IVGKQVNHRVSLHVVTSPTRWLG*ADPSPC
Trigger: ACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGT...CGGGCTCGTTACCACATGAAGGCTGACTCTGTGGTTGACCTGCTTTCCTACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCGCCACCAGTTCAGCCTaGATGTTGGCTACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSATSSA*MLATSS
Trigger: ACTGGAAGTAGCCAACATGCAGGCTGAACTGGTGGC...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACTCCGCAGAGCCTGGATaGCAGCTTTCTGGATCATCA +
Preference number: 4 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHSAEPG*QLSGSS
Trigger: TGATGATCCAGAAAGCTGCCATCCAGGCTCTGCGGA...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCCTGTGGAGCTGGCGTTaGAGTAAGCGCCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GGEGEGSIFISSCYLVGALWSWR*SKRLRC
Trigger: GCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACCTGTGGAGCTGGCGTTaGAGTAAGCGCCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHLWSWR*SKRLRC
Trigger: GCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAACGGAGTCTGTGGAGCTaGCGTTGGAGTAAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQRSLWS*RWSKRL
Trigger: CAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCG...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTTTGGCAGGCGACCAGTaGGCGAGGATCTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFLAGDQ*ARISLL
Trigger: CAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAA...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGCCCACAGACTTGAAGTaGAGGGCTGGTGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLPTDLK*RAGVLT
Trigger: TGTTAGGACACCAGCCCTCCACTTCAAGTCTGTGGG...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGGCGTCCAGTGTGTACTaGCAGGACTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRASSVY*QDWLLL
Trigger: CAGCAGCAGCCAGTCCTGTCAGTACACACTGGACGC...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACAGTGGCTCGGCTGCGCTaGTCCCTCGCCATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTVARLR*SLAMLK
Trigger: CTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCAC...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGTCTTATGATAGTTGTTaGCCGCGTGGCTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLSYDSC*PRGSAH
Trigger: ATGCGCTGAGCCACGCGGTCAACAACTATCATAAGA...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGTCATCAAGGAAAGTCTaGAGAAGAACCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLSSRKV*RRTSWS
Trigger: GGACCAGGAGGTTCTTCTTCAGACTTTCCTTGATGA...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGAAGAGTCATCTTCAGTaGAATTCAAGGCAAACCTCC +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRKSHLQ*NSRQTS
Trigger: GGAGGTTTGCCTTGAATTTCACTGAAGATGACTCTT...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTTGAAGCGATCACACTaGCCCAGGTCTCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSLKRSH*PRSLSV
Trigger: CACTGAAAGAGACCTGGGGCAGTGTGATCGCTTCAA...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTATGGCTTCTGCCACATaGTTCCTCTTAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASAMASAT*FLLASS
Trigger: ACTGGACGCTAAGAGGAAGCATGTGGCAGAAGCCAT...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAATCTGGGGGATCCCCTaGAGAGTGCGGGCACCCATC +
Preference number: 4 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPIWGIP*RVRAPI
Trigger: GATGGGTGCCCGCACTCTGCAGGGGATCCCCCAGAT...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACCTGGAGCTCATAGGTTaGGCTGACAGAATACTGCTC +
Preference number: 4 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHLELIG*ADRILL
Trigger: GAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAG...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGGCGGCTGTTGATCTTTaGTGTGTCTTCAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRAAVDL*CVFKFQ
Trigger: TTGAAACTTGAAGACACACCAAAGATCAACAGCCGC...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CCTCAGTCTGCTTCGCACCTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCATCAGCGCATACAAGGTaGCTCGGCTGCGCTGATCCC +
Preference number: 4 (lower is better)
Translates to: PQSASHLLLELQTSGYPPSAHTR*LGCADP
Trigger: GGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGA...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGGTGCGAAGCAGACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGTTTGTTGACACTGTCTaGGAAAAATCCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRFVDTV*EKSLLP
Trigger: GGGAAGCAAGGATTTTTCCCAGACAGTGTCAACAAA...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGAAGTTGGTGTTCATCTaGACCCCACTCCTAGCGAAG +
Preference number: 4 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLKLVFI*TPLLAK
Trigger: CTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTT...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTGGGATGTGGAAGTCTaGCAATCCCATGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSWDVEV*QSHVLE
Trigger: CTCCAGAACATGGGATTGCCAGACTTCCACATCCCA...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCGTTATTCCAGCACTGTaGGAGGCCCAGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVVIPAL*EAQAGG
Trigger: TCCTCCAGCCTGGGCCTCCCACAGTGCTGGAATAAC...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCGTCTTGACGGTAAAGTaGGTGGAGCAGTTTCCATAC +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSVLTVK*VEQFPY
Trigger: GTATGGAAACTGCTCCACTCACTTTACCGTCAAGAC...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACACTGTGCGGATGGGCTTaGAGCGATCACACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTLCGWA*SDHTAP
Trigger: TGGGGCAGTGTGATCGCTTCAAGCCCATCCGCACAG...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGAGGACTGGCTGCTGCTaGTCAGAGTTGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRRTGCC*SELTRG
Trigger: GCCCCTTGTCAACTCTGATCAGCAGCAGCCAGTCCT...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCGGCCTGCTTTGGAGGTaGTGTGGATTTGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GGEGEGSIFISSCYLVGAGLLWR*CGFGAL
Trigger: GAGAGCACCAAATCCACATCACCTCCAAAGCAGGCC...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp CCTCAGTCTGCTTCGCACCTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCAGGGCCACCAGGTAGGTaGCCACATCTATCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PQSASHLLLELQTSGYPPGPPGR*PHLSEG
Trigger: CCCTTCTGATAGATGTGGTCACCTACCTGGTGGCCC...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGGTGCGAAGCAGACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp CTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAAGGCCCATATTTCCAATaGCCCGCAGAATCAAATAGG +
Preference number: 4 (lower is better)
Translates to: LWSWRWSKRLRCSNSGQEGPYFQ*PAESNR
Trigger: CCTATTTGATTCTGCGGGTCATTGGAAATATGGGCC...TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGGGCCCATATTTCCAATaGCCCGCAGAATCAAATAGG +
Preference number: 4 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLGPYFQ*PAESNR
Trigger: CCTATTTGATTCTGCGGGTCATTGGAAATATGGGCC...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGCTCGATGAGGTCAGCTaGAGCAAATCCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRLDEVS*SKSKGS
Trigger: ACTGCCTTTGGATTTGCTTCAGCTGACCTCATCGAG...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGCTCCCAGATGCCTTCTaGAGCCATGAGCTCATTGCA +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLLPDAF*SHELIA
Trigger: TGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAG...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCATCCAGAAAGCAGGCTaGAGAACCTCAATGACTCGT +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSIQKAG*RTSMTR
Trigger: ACGAGTCATTGAGGTTCTTCAGCCTGCTTTCTGGAT...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAAGAAGGGGGTTGGCATaGACACGTTTCAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQRRGLA*TRFSHW
Trigger: CCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCT...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGACAAAGTTCTTCACTTaGTCATTCTGTTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRTKFFT*SFCSHG
Trigger: ACCATGGGAACAGAATGAGCAAGTGAAGAACTTTGT...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGAGGTTACCAGCCACATaGAGCTTCAGGGGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLRLPAT*SFRGSS
Trigger: GCTAGAACCCCTGAAGCTGCATGTGGCTGGTAACCT...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTATCCATGCCCACGGTaGCTACGGCTGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQYPCPR*LRLGRL
Trigger: CAGCCTCCCCAGCCGTAGGCACCGTGGGCATGGATA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACTATCCTGGACATGGCTaGAGCAAACTCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHYPGHG*SKLLRV
Trigger: AACTCTGAGGAGTTTGCTGCAGCCATGTCCAGGATA...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCATGAAGCTGCAGAGCTaGGGAACCTCCAGCTCAACC +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVMKLQS*GTSSST
Trigger: GGTTGAGCTGGAGGTTCCCCAGCTCTGCAGCTTCAT...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTCTATCAGAAGGGGGTTaGCATGCACACGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFLSEGG*HAHVSA
Trigger: GGCTGAAACGTGTGCATGCCAACCCCCTTCTGATAG...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCGATTCCCTTCTATTTTaGCTGAGGCTGGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSDSLLF*LRLGQV
Trigger: CACTTGACCCAGCCTCAGCCAAAATAGAAGGGAATC...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCGATTCCCTTCTATTTTaGCTGAGGCTGGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSDSLLF*LRLGQV
Trigger: CACTTGACCCAGCCTCAGCCAAAATAGAAGGGAATC...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TGTAAAGTGATGGGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTTGCGGAGGTAGGCTCTaGCTTCCGGGACTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CKVMGLDTSISCGKRDVTCGGRL*LPGLLW
Trigger: CCAAAGAAGTCCCGGAAGCCAGAGCCTACCTCCGCA...AGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCCCATCACTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACAGCTTTCCCAGGAGCTaGAGGTCATGGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHSFPRS*RSWRLA
Trigger: TGCCAGTCTCCATGACCTCCAGCTCCTGGGAAAGCT...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGTAATCCAGCTCCAGTaGGGAGTTCAAAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASAVIQLQ*GVQRHS
Trigger: AGAATGCCTTTGAACTCCCCACTGGAGCTGGATTAC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCGTTCCAGCTCTAATCTaGTGTCCCCGGTCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: GGEGEGSIFISSCYLVGAVPALI*CPRSAD
Trigger: ATCCGCTGACCGGGGACACCAGATTAGAGCTGGAAC...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAGTTCCAGCTCTAATCTaGTGTCCCCGGTCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQVPALI*CPRSAD
Trigger: ATCCGCTGACCGGGGACACCAGATTAGAGCTGGAAC...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp ATTGTAGGAAAGCAGGTCAACCACAGAGTCAGCCTTCATGTGGTAACGAGCCCGGTGTCACAACTTAGGTaGCCCATGAGGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: IVGKQVNHRVSLHVVTSPVSQLR*PMRATS
Trigger: TGAGGTCGCCCTCATGGGCCACCTAAGTTGTGACAC...CGGGCTCGTTACCACATGAAGGCTGACTCTGTGGTTGACCTGCTTTCCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTCTCGAGATGGCAGATaGAATCCCACAGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSSRDGR*NPTDLK
Trigger: CTTCAAGTCTGTGGGATTCCATCTGCCATCTCGAGA...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAATTGGAACTCTCGAGATaGCAGATGGAATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LWSWRWSKRLRCSNSGQELELSR*QMESHR
Trigger: TCTGTGGGATTCCATCTGCCATCTCGAGAGTTCCAA...TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCCCAAGGCTTGTAAAGTaGTGGGGCTGGACACCTCAA +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVPRLVK*WGWTPQ
Trigger: TTGAGGTGTCCAGCCCCATCACTTTACAAGCCTTGG...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGTGGCTCGGCTGCGCTaGTCCCTCGCCATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQVARLR*SLAMLK
Trigger: CTTCAACATGGCGAGGGATCAGCGCAGCCGAGCCAC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGGTTAATATCTGCCTGTaGAGGACTCCTCATCAACAT +
Preference number: 4 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLVNICL*RTPHQH
Trigger: ATGTTGATGAGGAGTCCTTCACAGGCAGATATTAAC...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCATAAGCTGTAGCAGATaGGTCCATTTGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSISCSR*VHLEKQ
Trigger: CTGCTTCTCCAAATGGACTCATCTGCTACAGCTTAT...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGGGTCCATCGCCAGCTaGGGTGGGGCGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFGSIAS*GGAAPG
Trigger: CCCAGGAGCCGCCCCACCGCAGCTGGCGATGGACCC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCACACCTCTTTCAGGGTaGACTGGCTGGTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVTPLSG*TGWSSG
Trigger: TCCTGAAGACCAGCCAGTGCACCCTGAAAGAGGTGT...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTAGTTCTGGAGTTAACTaGTCCATGGTTTGGCCCATA +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASASSGVN*SMVWPI
Trigger: TATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTAGTAAGCGCCTGAGGTaGAGTAATTCAGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFSKRLR*SNSGQE
Trigger: TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACT...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGGTCTGTGCTGGTGTTaGCACCACTGTAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQGLCWC*HHCRRR
Trigger: CCGCCTCCTACAGTGGTGGCAACACCAGCACAGACC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCATCGCCAGCTGCGGTaGGGCGGCTCCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQHRQLR*GGSWAA
Trigger: CGCAGCCCAGGAGCCGCCCCACCGCAGCTGGCGATG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGTCTTTCAGGGTGCACTaGCTGGTCTTCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLSFRVH*LVFRMK
Trigger: CTTCATCCTGAAGACCAGCCAGTGCACCCTGAAAGA...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCGCTCATACCTGGACATaGCTGCAGCAAACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVAHTWT*LQQTPQ
Trigger: CTGAGGAGTTTGCTGCAGCCATGTCCAGGTATGAGC...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGAACTGCTCCATGGTTTaGCCCATATTTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLNCSMV*PIFPMT
Trigger: GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTT...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTGGATGGCAGCTTTCTaGATCATCAGTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSWMAAF*IISDGF
Trigger: AAAGCCATCACTGATGATCCAGAAAGCTGCCATCCA...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAGGAGGTCATGGAGACTaGCAAAACCAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQGGHGD*QNQAPL
Trigger: GAGAGGAGCTTGGTTTTGCCAGTCTCCATGACCTCC...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TGTAAAGTGATGGGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTACCTCTCCAATCATCTaGGGGATCCCCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CKVMGLDTSISCGKRDVTTSPII*GIPCRV
Trigger: CACTCTGCAGGGGATCCCCCAGATGATTGGAGAGGT...AGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCCCATCACTTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGACTCGTGGAAGAAGTTaGTGTTCATCTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLTRGRS*CSSGPH
Trigger: GTGGGGTCCAGATGAACACCAACTTCTTCCACGAGT...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCGGAGTCTGTGGAGCTaGCGTTGGAGTAAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQRSLWS*RWSKRL
Trigger: CAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TGTGGATTTGGTGCTCTCAAATGCGAGGCCCATCTTCTTAGTACCTTCACCAAACGGAGTCTGTGGAGCTaGCGTTGGAGTAAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: CGFGALKCEAHLLSTFTKRSLWS*RWSKRL
Trigger: CAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCG...TTTGGTGAAGGTACTAAGAAGATGGGCCTCGCATTTGAGAGCACCAAATCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TGTAAAGTGATGGGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTTTTGGAGAAGCAGTTTaGCAGGCGACCAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: CKVMGLDTSISCGKRDVTFGEAV*QATSGR
Trigger: TCGCCCACTGGTCGCCTGCCAAACTGCTTCTCCAAA...AGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCCCATCACTTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACGCCATGCCACCCTCTTaGAAACTGTGGAGCCATAAG +
Preference number: 4 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHAMPPS*KLWSHK
Trigger: CTTATGGCTCCACAGTTTCCAAGAGGGTGGCATGGC...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGTAAAAGTAGGGACTTaGAACTCTCGAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASAVKVGT*NSRDGR
Trigger: TCTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTAC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAGACCTTCCGAGCCCTaGTGCCAGCTTTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQRPSEP*CQLWCR
Trigger: CCTGCACCAAAGCTGGCACCAGGGCTCGGAAGGTCT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCGATCGTAAGGGAGTCTaGGCGATCCATCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVDRKGV*AIHQKQ
Trigger: CTGCTTCTGATGGATCGCCCAGACTCCCTTACGATC...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACATCGGGCTTGTGCAGCTaGGATCGTAAGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTSGLCS*DRKGVW
Trigger: CCAGACTCCCTTACGATCCCAGCTGCACAAGCCCGA...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp ATTGTAGGAAAGCAGGTCAACCACAGAGTCAGCCTTCATGTGGTAACGAGCCCGACGGTATCCTGGACATaGCTGCAGCAAACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IVGKQVNHRVSLHVVTSPTVSWT*LQQTPQ
Trigger: CTGAGGAGTTTGCTGCAGCCATGTCCAGGATACCGT...CGGGCTCGTTACCACATGAAGGCTGACTCTGTGGTTGACCTGCTTTCCTACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCAGCTGCTGATCAGAGTTaGCAAGGGGCGGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: DMVVNRLVSTKDTQISRAAADQS*QGAGHA
Trigger: GGCATGACCCGCCCCTTGTCAACTCTGATCAGCAGC...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp AGTTACAAACTTCAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATAGATCCCTCGCCATGTTaGAGATCTCTCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SYKLQGIHQGSVLSLELIDPSPC*RSLAAA
Trigger: AGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATC...TATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTGAAGTTTGTAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTTTCTGGATCATCAGTaGTGGCTTTGTACTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSFLDHQ*WLCTLD
Trigger: GTCCAAAGTACAAAGCCATCACTGATGATCCAGAAA...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCTTTCTGGATCATCAGTaGTGGCTTTGTACTTTGGAC +
Preference number: 4 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSFLDHQ*WLCTLD
Trigger: GTCCAAAGTACAAAGCCATCACTGATGATCCAGAAA...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGTTAATATCTGCCTGTaGAGGACTCCTCATCAACAT +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASAVNICL*RTPHQH
Trigger: ATGTTGATGAGGAGTCCTTCACAGGCAGATATTAAC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCACACCATCAGGAACTTaGCCATTAACCCAGTACAAA +
Preference number: 4 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSTPSGT*PLTQYK
Trigger: TTTGTACTGGGTTAATGGTCAAGTTCCTGATGGTGT...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGTTGGAGTAAGCGCCTaGGGTGCAGTAATTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPVGVSA*GAVIQA
Trigger: GGCCTGAATTACTGCACCTCAGGCGCTTACTCCAAC...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGACTCCTTCAGGCTATTaGGGTGGTCTTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLTPSGY*GGLAKS
Trigger: AGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGT...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAGTGTTAGGATCCCTCTaGCAAGACAGGCCATATGTG +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQVLGSL*QDRPYV
Trigger: CACATATGGCCTGTCTTGTCAGAGGGATCCTAACAC...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGCTCATGTCAATGGCTaGAGCCAGCCCAGCGATGTC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQAHVNG*SQPSDV
Trigger: GACATCGCTGGGCTGGCTTCAGCCATTGACATGAGC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCATGGCTTCTGCCACATaGTTCCTCTTAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GGEGEGSIFISSCYLVGAMASAT*FLLASS
Trigger: ACTGGACGCTAAGAGGAAGCATGTGGCAGAAGCCAT...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACAAGAAGGGGGTTGGCATaGACACGTTTCAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTRRGLA*TRFSHW
Trigger: CCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCT...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAACAAGGTGGCTCGGCTaGGCTGATCCCTCGCCATGT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQTRWLG*ADPSPC
Trigger: ACATGGCGAGGGATCAGCGCAGCCGAGCCACCTTGT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGCAAACTGACCAGGACTaGCTGTTCTCAATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLQTDQD*LFSMRG
Trigger: ACCTCTCATTGAGAACAGGCAGTCCTGGTCAGTTTG...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAACTCACTTCTGGCTTCTaGTTGCAAACGGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQLTSGF*LQTGYG
Trigger: TCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAAGAGAGGCCAAGCTCTaGATTCAGCTCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQREAKL*IQLILQ
Trigger: CTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCT...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGGTAGGTCCCAGTGGTaGCACTGGCTGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQGRSQW*HWLLSG
Trigger: TCCAGAAAGCAGCCAGTGGCACCACTGGGACCTACC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTCTGAGGCAGGAGAATTaGTTGAACCCGGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTLRQEN*LNPEGR
Trigger: TCTGCCTTCCGGGTTCAAGCAATTCTCCTGCCTCAG...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCGGGTCGCATCTTTTaGACAGACCAGGCTGACATT +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVSGRIF*TDQADI
Trigger: AATGTCAGCCTGGTCTGTCCAAAAGATGCGACCCGA...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTCTATCAGAAGGGGGTTaGCATGCACACGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTLSEGG*HAHVSA
Trigger: GGCTGAAACGTGTGCATGCCAACCCCCTTCTGATAG...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGTCAGCGCATACAAGGTaGCTCGGCTGCGCTGATCCC +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGSAHTR*LGCADP
Trigger: GGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGA...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTTCCGCAGAGCCTGGATaGCAGCTTTCTGGATCATCA +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTSAEPG*QLSGSS
Trigger: TGATGATCCAGAAAGCTGCCATCCAGGCTCTGCGGA...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTGGAGGTCATGGAGACTaGCAAAACCAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTGGHGD*QNQAPL
Trigger: GAGAGGAGCTTGGTTTTGCCAGTCTCCATGACCTCC...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp TGTAAAGTGATGGGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGGAGGTCATGGAGACTaGCAAAACCAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CKVMGLDTSISCGKRDVTGGHGD*QNQAPL
Trigger: GAGAGGAGCTTGGTTTTGCCAGTCTCCATGACCTCC...AGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCCCATCACTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp ATAGATGCCCCAGAGAGGCCAAGCTCTGCATTCAGCTCATTCTCCAGCACCAGGGTTCAGCCTGCATGTTaGCTACTTCCAGTTTTACTC +
Preference number: 4 (lower is better)
Translates to: IDAPERPSSAFSSFSSTRVQPAC*LLPVLL
Trigger: GAGTAAAACTGGAAGTAGCCAACATGCAGGCTGAAC...CCTGGTGCTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCTGGGGCATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp GACTTGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCAGGAGGCGGAGTCTGTaGAGCTGGCGTTGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: DLSSGVNCSMVWPIFPMTRRRSL*SWRWSK
Trigger: CTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCT...GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACTGGGATGTGGAAGTCTaGCAATCCCATGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHWDVEV*QSHVLE
Trigger: CTCCAGAACATGGGATTGCCAGACTTCCACATCCCA...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGCCTGTCTGCTCAGCTaGAGTAAGCAGGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQACLLS*SKQGTD
Trigger: GTCAGTGCCCTGCTTACTCCAGCTGAGCAGACAGGC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAGCTCAACCTTGCAGTTaGTCCTGGTGGCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRAQPCS*SWWHFL
Trigger: CAAGAAGTGCCACCAGGATCAACTGCAAGGTTGAGC...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AGCTCATTGCAACTATTAATTTGGAACCCACGTGCCGGAAAGTCATGTCTGTTTGCTGCTGATCAGAGTTaGCAAGGGGCGGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: SSLQLLIWNPRAGKSCLFAADQS*QGAGHA
Trigger: GGCATGACCCGCCCCTTGTCAACTCTGATCAGCAGC...AAACAGACATGACTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAATGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGCGTCCAGTGTGTACTaGCAGGACTGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNASSVY*QDWLLL
Trigger: CAGCAGCAGCCAGTCCTGTCAGTACACACTGGACGC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TGTGGATTTGGTGCTCTCAAATGCGAGGCCCATCTTCTTAGTACCTTCACCAAAGGCCTGCTTTGGAGGTaGTGTGGATTTGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CGFGALKCEAHLLSTFTKGLLWR*CGFGAL
Trigger: GAGAGCACCAAATCCACATCACCTCCAAAGCAGGCC...TTTGGTGAAGGTACTAAGAAGATGGGCCTCGCATTTGAGAGCACCAAATCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGGGGCCACCAGGTAGGTaGCCACATCTATCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGGPPGR*PHLSEG
Trigger: CCCTTCTGATAGATGTGGTCACCTACCTGGTGGCCC...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp GACTTGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCGATCCCTCGCCATGTTaGAGATCTCTCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DLSSGVNCSMVWPIFPMTDPSPC*RSLAAA
Trigger: AGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATC...GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCATGACAGTTGGAAGTTaGGATTCTTTCAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSMTVGS*DSFRAS
Trigger: AGAAGCTCTGAAAGAATCTCAACTTCCAACTGTCAT...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTCCAAGCCAATCTCGATaGGGTCAGCTGAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTPSQSR*GQLKQI
Trigger: GATTTGCTTCAGCTGACCTCATCGAGATTGGCTTGG...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATGGAATCCCACAGACTTaGAGTGGAGGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHGIPQT*SGGLVS
Trigger: GGACACCAGCCCTCCACTTCAAGTCTGTGGGATTCC...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAACGAGCCCGAAGGCTaGAATGGTCTGTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQNEPEG*NGLCWC
Trigger: ACACCAGCACAGACCATTTCAGCCTTCGGGCTCGTT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTGCTGAAGAACCTCAATaGCTCGTAATCAGCCTGATA +
Preference number: 4 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFAEEPQ*LVISLI
Trigger: TATCAGGCTGATTACGAGTCATTGAGGTTCTTCAGC...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACCAGTGATAGCTCTGTaGGGGCGGCTTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQPVIAL*GRLSHP
Trigger: TGGATGGGAAAGCCGCCCTCACAGAGCTATCACTGG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTTTGAAGCGATCACACTaGCCCAGGTCTCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTLKRSH*PRSLSV
Trigger: CACTGAAAGAGACCTGGGGCAGTGTGATCGCTTCAA...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCCAAGAGAGATGTGACTaGTTCATCACTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVQERCD*FITEAS
Trigger: AGAGGCCTCAGTGATGAAGCAGTCACATCTCTCTTG...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp AGCTCATTGCAACTATTAATTTGGAACCCACGTGCCGGAAAGTCATGTCTGTTTAAGATCTCTCGCAGCTaGTGTGCTGAGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SSLQLLIWNPRAGKSCLFKISRS*CAEGSG
Trigger: CCCCGAGCCCTCAGCACAGCAGCTGCGAGAGATCTT...AAACAGACATGACTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAATGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTACAAAGTTCTTCACTTaGTCATTCTGTTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASATKFFT*SFCSHG
Trigger: ACCATGGGAACAGAATGAGCAAGTGAAGAACTTTGT...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTATCTGGGGGATCCCCTaGAGAGTGCGGGCACCCATC +
Preference number: 4 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFIWGIP*RVRAPI
Trigger: GATGGGTGCCCGCACTCTGCAGGGGATCCCCCAGAT...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CCTCCACTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCCAGGAAAGACTTGCTTaGAAACTGACCAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: PPLSSLTGLFGEGMINFSQERLA*KLTRTA
Trigger: GGCAGTCCTGGTCAGTTTGCAAGCAAGTCTTTCCTG...GCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGTTAATGATGCCACTTTaGAGATCAGAGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLLMMPL*RSEVEV
Trigger: CACCTCCACCTCTGATCTGCAAAGTGGCATCATTAA...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCTGGAACGGGCCACTaGAGCTCACTGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSGTGH*SSLFSI
Trigger: GATGCTGAACAGTGAGCTGCAGTGGCCCGTTCCAGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCAACTGGAGGATGTGAGTaGAGCACTGAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPTGGCE*STEAVH
Trigger: GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGT...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCATCAGCGCATACAAGGTaGCTCGGCTGCGCTGATCCC +
Preference number: 4 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPSAHTR*LGCADP
Trigger: GGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGA...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCGATTCCCTTCTATTTTaGCTGAGGCTGGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVDSLLF*LRLGQV
Trigger: CACTTGACCCAGCCTCAGCCAAAATAGAAGGGAATC...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp GACTTGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCACCTCTCCAATCATCTaGGGGATCCCCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: DLSSGVNCSMVWPIFPMTTSPII*GIPCRV
Trigger: CACTCTGCAGGGGATCCCCCAGATGATTGGAGAGGT...GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACATTTGGAGAAGCAGTTTaGCAGGCGACCAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATFGEAV*QATSGR
Trigger: TCGCCCACTGGTCGCCTGCCAAACTGCTTCTCCAAA...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACAGCCCGAAGGCTGAAATaGTCTGTGCTGGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATARRLK*SVLVLP
Trigger: TGGCAACACCAGCACAGACCATTTCAGCCTTCGGGC...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp CCTCCACTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCCGACACCCAGAATCATaGCCTGATAAGCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: PPLSSLTGLFGEGMINFSRHPES*PDKHFP
Trigger: TGGGAAGTGCTTATCAGGCCATGATTCTGGGTGTCG...GCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCCCAGTGGTGCCACTaGCTGCTTTCTGGAACCTCA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSQWCH*LLSGTS
Trigger: TGAGGTTCCAGAAAGCAGCCAGTGGCACCACTGGGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR CAA 72 bp GTTCCTGGAGAGTCTTCAAAACAGCTTCGGCCTGCTTaGGAGGTGATGTGGATTTGGTGCTCTCAAATGCGA +
Preference number: 4 (lower is better)
Translates to: VPGESSKQLRPA*EVMWIWCSQMR
Trigger: TCGCATTTGAGAGCACCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTTGAAGACTCTCCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp CCATATTTGTCACAAACTCCACAGACACGGAGGGTTTaGCCACCAGTTCAGCCTGCATGTTGGCTACTTCCA +
Preference number: 4 (lower is better)
Translates to: PYLSQTPQTRRV*PPVQPACWLLP
Trigger: TGGAAGTAGCCAACATGCAGGCTGAACTGGTGGCAAAACCCTCCGTGTCTGTGGAGTTTGTGACAAATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp CGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTaGCAAACGGGGTATGGAAATAACACCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: RPVGEDLTSGFC*QTGYGNNTLDF
Trigger: AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCCAAGGCTTGTAAAGTaGTGGGGCTGGACACCTCAA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQPRLVK*WGWTPQ
Trigger: TTGAGGTGTCCAGCCCCATCACTTTACAAGCCTTGG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGATCCCTCGCCATGTTaGAGATCTCTCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQDPSPC*RSLAAA
Trigger: AGCAGCTGCGAGAGATCTTCAACATGGCGAGGGATC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CCTCAGTCTGCTTCGCACCTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCATGGCTCCGGGAGCAATaGCTCCAGATGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: PQSASHLLLELQTSGYPPWLREQ*LQMKIF
Trigger: AAATATCTTCATCTGGAGTCATTGCTCCCGGAGCCA...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGGTGCGAAGCAGACTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGGAATCCCACAGACTTaGAGTGGAGGGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNGIPQT*SGGLVS
Trigger: GGACACCAGCCCTCCACTTCAAGTCTGTGGGATTCC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTGATCAGAGGTGGAGGTaGGGGAGAGGGTTCCATCTT +
Preference number: 4 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFDQRWR*GRGFHL
Trigger: AAGATGGAACCCTCTCCCTCACCTCCACCTCTGATC...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGAAGAGCCTGAAGACTaGCTTCAAAGGCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQEEPED*LQRQAW
Trigger: CCATGCCTGCCTTTGAAGTCAGTCTTCAGGCTCTTC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGACACCTCTTTCAGGGTaGACTGGCTGGTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQTPLSG*TGWSSG
Trigger: TCCTGAAGACCAGCCAGTGCACCCTGAAAGAGGTGT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAAGTGGATATTTCTGTTaGCACATTGCCCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQSGYFC*HIALPR
Trigger: ACGAGGAAGGGCAATGTGGCAACAGAAATATCCACT...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACACTTGCAGATGGCTTCTaGCACATGCTTCCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTLADGF*HMLPLS
Trigger: GCTAAGAGGAAGCATGTGGCAGAAGCCATCTGCAAG...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp AGTTACAAACTTCAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATACTTGCAGATGGCTTCTaGCACATGCTTCCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SYKLQGIHQGSVLSLELILADGF*HMLPLS
Trigger: GCTAAGAGGAAGCATGTGGCAGAAGCCATCTGCAAG...TATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTGAAGTTTGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAGTGATGTGGATTTGGTaGTCTCAAATGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRVMWIW*SQMRGP
Trigger: TGGGCCTCGCATTTGAGAGCACCAAATCCACATCAC...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGAAAACAGCTTCGGCCTaGTTTGGAGGTGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRKTASA*FGGDVD
Trigger: ATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTT...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATAGAAGGGGGTTGGCATaGACACGTTTCAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHRRGLA*TRFSHW
Trigger: CCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCT...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACAGCCACCAGTTCAGCCTaGATGTTGGCTACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATATSSA*MLATSS
Trigger: ACTGGAAGTAGCCAACATGCAGGCTGAACTGGTGGC...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCCGCAGCAGTGCATTTTaGTTAGAGAAGGTCATATCC +
Preference number: 4 (lower is better)
Translates to: GGEGEGSIFISSCYLVGARSSAF*LEKVIS
Trigger: GGATATGACCTTCTCTAAGCAAAATGCACTGCTGCG...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACAATCTTTTCGGGCTTGTaGAGCTGGGATCGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTIFSGL*SWDRKG
Trigger: TCCCTTACGATCCCAGCTGCACAAGCCCGAAAAGAT...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAATGAAGCTGCAGAGCTaGGGAACCTCCAGCTCAACC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQMKLQS*GTSSST
Trigger: GGTTGAGCTGGAGGTTCCCCAGCTCTGCAGCTTCAT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAACCTGCTTCCCTTCTaGAATGGCCAGCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQNLLPF*NGQLEL
Trigger: GAGCTCAAGCTGGCCATTCCAGAAGGGAAGCAGGTT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCAAGAGATTAGCTCTCTaGATATTTTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSKRLAL*IFCSEM
Trigger: CATCTCTGAGCAAAATATCCAGAGAGCTAATCTCTT...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCAACTGGAGGATGTGAGTaGAGCACTGAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: DMVVNRLVSTKDTQISRATGGCE*STEAVH
Trigger: GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGT...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACTATCAGAAGGGGGTTaGCATGCACACGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPLSEGG*HAHVSA
Trigger: GGCTGAAACGTGTGCATGCCAACCCCCTTCTGATAG...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGATGGCTTTGTACTTTaGACACATTTCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: RSSLAGDQWARISLLASADGFVL*THFRIE
Trigger: TTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTGGATGGCAGCTTTCTaGATCATCAGTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVWMAAF*IISDGF
Trigger: AAAGCCATCACTGATGATCCAGAAAGCTGCCATCCA...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGTTTGTTGACACTGTCTaGGAAAAATCCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLDTSISCGKRDVTASSLFVDTV*EKSLLP
Trigger: GGGAAGCAAGGATTTTTCCCAGACAGTGTCAACAAA...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCCATGTTTATCATCTTTaGTATAGCCAAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSHVYHL*YSQSGP
Trigger: TGGACCACTTTGGCTATACCAAAGATGATAAACATG...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATAAGCTTTCCCAGGAGCTaGAGGTCATGGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: EFETSLTWLSTGLSLLKISFPRS*RSWRLA
Trigger: TGCCAGTCTCCATGACCTCCAGCTCCTGGGAAAGCT...TATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CCTCCACTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCGTAATCCAGCTCCAGTaGGGAGTTCAAAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PPLSSLTGLFGEGMINFSVIQLQ*GVQRHS
Trigger: AGAATGCCTTTGAACTCCCCACTGGAGCTGGATTAC...GCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGGCAGGCGACCAGTaGGCGAGGATCTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNLAGDQ*ARISLL
Trigger: CAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAA...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAGCAGATGAGTCCATTTaGAGAAGCAGTTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRADESI*RSSLAG
Trigger: GCCTGCCAAACTGCTTCTCCAAATGGACTCATCTGC...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCCCACAGACTTGAAGTaGAGGGCTGGTGTCCTAACA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQPTDLK*RAGVLT
Trigger: TGTTAGGACACCAGCCCTCCACTTCAAGTCTGTGGG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCATTCCTGTTATCTGGTTaGTGCCTTGGAGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPFLLSG*CLGGRR
Trigger: CCTCCTACCTCCAAGGCACCAACCAGATAACAGGAA...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACTTGGTAGGTCCCAGTaGTGCCACTGGCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQLGRSQ*CHWLLS
Trigger: AGAAAGCAGCCAGTGGCACCACTGGGACCTACCAAG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR CAA 72 bp AAAACAGCTTCGGCCTGCTTTGGAGGTGATGTGGATTaGGTGCTCTCAAATGCGAGGCCCATCTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: KTASACFGGDVD*VLSNARPIFLV
Trigger: TACTAAGAAGATGGGCCTCGCATTTGAGAGCACCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp AGCTCATTCTCCAGCACCAGGAGACTACACTTCAAGTaGGTCGTTGCACTGGTAGATATTCCATCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSFSSTRRLHFK*VVALVDIPSWP
Trigger: TGGCCAAGATGGAATATCTACCAGTGCAACGACCAACTTGAAGTGTAGTCTCCTGGTGCTGGAGAATGAGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CAA 72 bp TGCAGCTTCAGGGGTTCTAGCCGTAGTTTCCCATTGTaGGTGAGATCCAGAGCATTGTATTTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: CSFRGSSRSFPL*VRSRALYFRSL
Trigger: CAGTGACCTGAAATACAATGCTCTGGATCTCACCAACAATGGGAAACTACGGCTAGAACCCCTGAAGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACATTGGACAGACCAGGCTaGCATTTTCCAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTLDRPG*HFPAFP
Trigger: AGGAAATGCTGGAAAATGTCAGCCTGGTCTGTCCAA...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGGCTCAACCTTGCAGTTaGTCCTGGTGGCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGAQPCS*SWWHFL
Trigger: CAAGAAGTGCCACCAGGATCAACTGCAAGGTTGAGC...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCTTGACGGTAAAGTaGGTGGAGCAGTTTCCATAC +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTVLTVK*VEQFPY
Trigger: GTATGGAAACTGCTCCACTCACTTTACCGTCAAGAC...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGCTGCTGATCAGAGTTaGCAAGGGGCGGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFAADQS*QGAGHA
Trigger: GGCATGACCCGCCCCTTGTCAACTCTGATCAGCAGC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTTGGAGCAAAGAAGCGGCTGTTaGTCTTTGGTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: EGEGSIFISSCYLVGALEQRSGC*SLVCLQ
Trigger: TTGAAGACACACCAAAGATCAACAGCCGCTTCTTTG...CTCCAAGGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GAAGACTCCCAGATGCCTTCTGAAGCCATGAGCTCATTGCAACTATTAATTTGGCCAAGGCTTGTAAAGTaGTGGGGCTGGACACCTCAA +
Preference number: 4 (lower is better)
Translates to: EDSQMPSEAMSSLQLLIWPRLVK*WGWTPQ
Trigger: TTGAGGTGTCCAGCCCCATCACTTTACAAGCCTTGG...CCAAATTAATAGTTGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACATCTTATGATAGTTGTTaGCCGCGTGGCTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATSYDSC*PRGSAH
Trigger: ATGCGCTGAGCCACGCGGTCAACAACTATCATAAGA...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGATCATCAAGGAAAGTCTaGAGAAGAACCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRSSRKV*RRTSWS
Trigger: GGACCAGGAGGTTCTTCTTCAGACTTTCCTTGATGA...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCTCGATGAGGTCAGCTaGAGCAAATCCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQLDEVS*SKSKGS
Trigger: ACTGCCTTTGGATTTGCTTCAGCTGACCTCATCGAG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GACTTGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCTCGATGAGGTCAGCTaGAGCAAATCCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: DLSSGVNCSMVWPIFPMTLDEVS*SKSKGS
Trigger: ACTGCCTTTGGATTTGCTTCAGCTGACCTCATCGAG...GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCCAAGCCAATCTCGATaGGGTCAGCTGAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQPSQSR*GQLKQI
Trigger: GATTTGCTTCAGCTGACCTCATCGAGATTGGCTTGG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTGCTTTTAGGGCAACATaGGCCTCCAGACCCGACTCG +
Preference number: 4 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFAFRAT*ASRPDS
Trigger: CGAGTCGGGTCTGGAGGCTCATGTTGCCCTAAAAGC...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGGCCCATCATGTCATTTaGGAGCTTAAGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRAHHVI*ELKSFL
Trigger: CAAGAAGGACTTAAGCTCTCAAATGACATGATGGGC...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGACCTGCTTCGTTTGCTaGGGTGGTTCCATTCCCTAT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQTCFVC*GGSIPY
Trigger: ATAGGGAATGGAACCACCTCAGCAAACGAAGCAGGT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGCCCTGCAGCTTCACTaGAGACCGTGTGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILALQLH*RPCALG
Trigger: TCCAAGAGCACACGGTCTTCAGTGAAGCTGCAGGGC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGGCTGGGGAGGCTGCTaGGGTGGAGATGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFGWGGC*GGDAFL
Trigger: AAGAAAGGCATCTCCACCTCAGCAGCCTCCCCAGCC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCGCAAACCTCCATCTCTaGAGAAAGTACAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVANLHL*RKYKHL
Trigger: AAGATGCTTGTACTTTCTTCAGAGATGGAGGTTTGC...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGTGTACTTCCGGAGGTaGTTGAATCGGGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQVYFRR*LNRVAS
Trigger: AGATGCGACCCGATTCAAGCACCTCCGGAAGTACAC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATAGTGTACTTCCGGAGGTaGTTGAATCGGGTCGCATCT +
Preference number: 4 (lower is better)
Translates to: EFETSLTWLSTGLSLLKIVYFRR*LNRVAS
Trigger: AGATGCGACCCGATTCAAGCACCTCCGGAAGTACAC...TATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAGTGGATATTTCTGTTaGCACATTGCCCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTSGYFC*HIALPR
Trigger: ACGAGGAAGGGCAATGTGGCAACAGAAATATCCACT...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTGAAGCGATCACACTaGCCCAGGTCTCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQLKRSH*PRSLSV
Trigger: CACTGAAAGAGACCTGGGGCAGTGTGATCGCTTCAA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGTGATGTGGATTTGGTaGTCTCAAATGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQVMWIW*SQMRGP
Trigger: TGGGCCTCGCATTTGAGAGCACCAAATCCACATCAC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAAGATCTCTCGCAGCTaGTGTGCTGAGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFKISRS*CAEGSG
Trigger: CCCCGAGCCCTCAGCACAGCAGCTGCGAGAGATCTT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACCCATTTACCATATCCTaGTCATGTTTATCATCTTTG +
Preference number: 4 (lower is better)
Translates to: HAHVSATGGCEWSTEAVHPFTIS*SCLSSL
Trigger: CAAAGATGATAAACATGAGCAGGATATGGTAAATGG...GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGGATCCCCTGCAGAGTaGGGGCACCCATCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFGSPAE*GHPSEA
Trigger: TGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCTGGGGGATCCCCTaGAGAGTGCGGGCACCCATC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQIWGIP*RVRAPI
Trigger: GATGGGTGCCCGCACTCTGCAGGGGATCCCCCAGAT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCTTCATCACTGAGGCCTCTCAGCTCAGTAACCAGCTTATTGAAGAGATTAGCTAGTAAGCGCCTGAGGTaGAGTAATTCAGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ASSLRPLSSVTSLLKRLASKRLR*SNSGQE
Trigger: TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACT...AGCTAATCTCTTCAATAAGCTGGTTACTGAGCTGAGAGGCCTCAGTGATGAAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp TGTGGATTTGGTGCTCTCAAATGCGAGGCCCATCTTCTTAGTACCTTCACCAAAGCGCTGACAGAATACTaGTCAATCTCTCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: CGFGALKCEAHLLSTFTKALTEY*SISPVG
Trigger: GCCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGC...TTTGGTGAAGGTACTAAGAAGATGGGCCTCGCATTTGAGAGCACCAAATCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCTCACTTCTGGCTTCTaGTTGCAAACGGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQLTSGF*LQTGYG
Trigger: TCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATTGTAGGAAAGCAGGTCAACCACAGAGTCAGCCTTCATGTGGTAACGAGCCCGACCAGTTGTACAAGTTaGTGTAGACATTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: IVGKQVNHRVSLHVVTSPTSCTS*CRHSWR
Trigger: TCTCCACGAATGTCTACAGCAACTTGTACAACTGGT...CGGGCTCGTTACCACATGAAGGCTGACTCTGTGGTTGACCTGCTTTCCTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAGTGGTGCCACTGGCTaGTTTCTGGAACCTCACGTC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNSGATG*FLEPHV
Trigger: GACGTGAGGTTCCAGAAAGCAGCCAGTGGCACCACT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCTGCTTATAGTCTACTaGCTACTGCAAGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQLLIVY*LLQGWL
Trigger: GAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCCTTCCGAGCCCTGGTaGCAGCTTTGGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQPSEPW*QLWCRS
Trigger: GGACCTGCACCAAAGCTGGCACCAGGGCTCGGAAGG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCCCGGAAGGCAGAGTTaGAGTGAGCCGAGATTGTAT +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGPGRQS*SEPRLY
Trigger: ATACAATCTCGGCTCACTGCAACTCTGCCTTCCGGG...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCTTTCAGGGTGCACTaGCTGGTCTTCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSFRVH*LVFRMK
Trigger: CTTCATCCTGAAGACCAGCCAGTGCACCCTGAAAGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GAACTCCTTCAGGCTATTGAGGTGGTCTTGCAAAGTCTGGGTATAAGGAAGACTTCTTTCAGGGTGCACTaGCTGGTCTTCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: ELLQAIEVVLQSLGIRKTSFRVH*LVFRMK
Trigger: CTTCATCCTGAAGACCAGCCAGTGCACCCTGAAAGA...AGTCTTCCTTATACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCAAACCTGCTTCCCTTCTaGAATGGCCAGCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: DMVVNRLVSTKDTQISRANLLPF*NGQLEL
Trigger: GAGCTCAAGCTGGCCATTCCAGAAGGGAAGCAGGTT...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp TGTGGATTTGGTGCTCTCAAATGCGAGGCCCATCTTCTTAGTACCTTCACCAAACACCTCAATCAGCTGTaGCAAGAGAGATGTGACTGC +
Preference number: 4 (lower is better)
Translates to: CGFGALKCEAHLLSTFTKHLNQL*QERCDC
Trigger: GCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTG...TTTGGTGAAGGTACTAAGAAGATGGGCCTCGCATTTGAGAGCACCAAATCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CCTCCACTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCAACTGCTCCATGGTTTaGCCCATATTTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: PPLSSLTGLFGEGMINFSNCSMV*PIFPMT
Trigger: GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTT...GCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCGAGTTAACTGCTCCATaGTTTGGCCCATATTTCCAA +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVELTAP*FGPYFQ
Trigger: TTGGAAATATGGGCCAAACCATGGAGCAGTTAACTC...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTGAAGTCCATGACAGTTaGAAGTTGAGATTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFEVHDS*KLRFFQ
Trigger: CTGAAAGAATCTCAACTTCCAACTGTCATGGACTTC...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGGAGGTCATGGAGACTaGCAAAACCAAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQGGHGD*QNQAPL
Trigger: GAGAGGAGCTTGGTTTTGCCAGTCTCCATGACCTCC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACAAAGTTGGTGTTCATCTaGACCCCACTCCTAGCGAAG +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATKLVFI*TPLLAK
Trigger: CTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTT...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GCTTCATCACTGAGGCCTCTCAGCTCAGTAACCAGCTTATTGAAGAGATTAGCTACTCGTGGAAGAAGTTaGTGTTCATCTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: ASSLRPLSSVTSLLKRLATRGRS*CSSGPH
Trigger: GTGGGGTCCAGATGAACACCAACTTCTTCCACGAGT...AGCTAATCTCTTCAATAAGCTGGTTACTGAGCTGAGAGGCCTCAGTGATGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGTTCTCAATGAGAGGTaGGATCACCTCCGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPVLNER*DHLRFG
Trigger: ACCAAAACGGAGGTGATCCCACCTCTCATTGAGAAC...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGTTCCAGCTCTAATCTaGTGTCCCCGGTCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNVPALI*CPRSAD
Trigger: ATCCGCTGACCGGGGACACCAGATTAGAGCTGGAAC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACTTGCAACTATTAATTTaGAACCCACGTGCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHLQLLI*NPRAGK
Trigger: CTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAA...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGTTCAGGCTATTGAGGTaGTCTTGCAAAGTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRFRLLR*SCKVWV
Trigger: TACCCAGACTTTGCAAGACCACCTCAATAGCCTGAA...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GAACTCCTTCAGGCTATTGAGGTGGTCTTGCAAAGTCTGGGTATAAGGAAGACTGGCAATCCCATGTTCTaGAGGTTGAACTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ELLQAIEVVLQSLGIRKTGNPMF*RLNSFR
Trigger: CCTGAAGGAGTTCAACCTCCAGAACATGGGATTGCC...AGTCTTCCTTATACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGGTAAAAGTAGGGACTTaGAACTCTCGAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRVKVGT*NSRDGR
Trigger: TCTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTAC...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTGCTTGCTGGGCACTaGGACTCAGAAACAGTGCAT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQLLAGH*DSETVH
Trigger: ATGCACTGTTTCTGAGTCCCAGTGCCCAGCAAGCAA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGGGAGGCTGCTGAGGTaGAGATGCCTTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQGRLLR*RCLSCL
Trigger: AAGACAAGAAAGGCATCTCCACCTCAGCAGCCTCCC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTATCCTTGAGTCCCTaGAAACTGGCTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQLSLSP*KLAWPS
Trigger: GGAAGGCCAAGCCAGTTTCCAGGGACTCAAGGATAA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTACGGTATCCTGGACATaGCTGCAGCAAACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFTVSWT*LQQTPQ
Trigger: CTGAGGAGTTTGCTGCAGCCATGTCCAGGATACCGT...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCCTGGTGGCACTTCTTaGATCAGCAGTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFPGGTS*ISSPRD
Trigger: GTCCCTGGGACTGCTGATTCAAGAAGTGCCACCAGG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCTGGAATGGCCAGCTTaGGCTCATACCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILLEWPA*AHTWTW
Trigger: CCATGTCCAGGTATGAGCTCAAGCTGGCCATTCCAG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCTGTGCGGATGGGCTTaGAGCGATCACACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQLCGWA*SDHTAP
Trigger: TGGGGCAGTGTGATCGCTTCAAGCCCATCCGCACAG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp AGTTACAAACTTCAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATACAAAGAAGCGGCTGTTaGTCTTTGGTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SYKLQGIHQGSVLSLELIQRSGC*SLVCLQ
Trigger: TTGAAGACACACCAAAGATCAACAGCCGCTTCTTTG...TATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTGAAGTTTGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGGCCTGCTTTGGAGGTaGTGTGGATTTGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILGLLWR*CGFGAL
Trigger: GAGAGCACCAAATCCACATCACCTCCAAAGCAGGCC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGGGCCACCAGGTAGGTaGCCACATCTATCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFGPPGR*PHLSEG
Trigger: CCCTTCTGATAGATGTGGTCACCTACCTGGTGGCCC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATCTTATGATAGTTGTTaGCCGCGTGGCTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQSYDSC*PRGSAH
Trigger: ATGCGCTGAGCCACGCGGTCAACAACTATCATAAGA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCATCAAGGAAAGTCTaGAGAAGAACCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSSRKV*RRTSWS
Trigger: GGACCAGGAGGTTCTTCTTCAGACTTTCCTTGATGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATCCAAGCCAATCTCGATaGGGTCAGCTGAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHPSQSR*GQLKQI
Trigger: GATTTGCTTCAGCTGACCTCATCGAGATTGGCTTGG...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAAGTACAAAGCTTTGTTaGCACTGTCTGGGAAAAATC +
Preference number: 4 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQSTKLC*HCLGKI
Trigger: GATTTTTCCCAGACAGTGTCAACAAAGCTTTGTACT...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGCTCATAGGTTGCGCTaGCAGAATACTGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQAHRLR*QNTAQS
Trigger: AGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATCAAAGCTCATAGGTTGCGCTaGCAGAATACTGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: GVNCSMVWPIFPMTRRIKAHRLR*QNTAQS
Trigger: AGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGC...TTTGATTCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGAGCAGCTTGACTGGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCATTCGCACCTTCTGCTTaGGTTACAAACTTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LSSLTGLFGEGMINFSFPFAPSA*VTNFRV
Trigger: TACCCTGAAGTTTGTAACTCAAGCAGAAGGTGCGAA...TGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATAAGCTGTAGCAGATaGGTCCATTTGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRISCSR*VHLEKQ
Trigger: CTGCTTCTCCAAATGGACTCATCTGCTACAGCTTAT...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGTGTTCAAGGTATATTTaGCCCGGCCATCGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRCSRYI*PGHRFL
Trigger: TAAAAAGCGATGGCCGGGTCAAATATACCTTGAACA...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGATCAGAGGTGGAGGTaGGGGAGAGGGTTCCATCTT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILDQRWR*GRGFHL
Trigger: AAGATGGAACCCTCTCCCTCACCTCCACCTCTGATC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TGTAGACATTCGTGGAGAGGTCTAGAACACCCAGGAGAGGCACTTGCAGTTGATCTTAGTGTCGCCTTGTaGGCACCACTATTAATTTTG +
Preference number: 4 (lower is better)
Translates to: CRHSWRGLEHPGEALAVDLSVAL*APLLIL
Trigger: CAAAATTAATAGTGGTGCTCACAAGGCGACACTAAG...ATCAACTGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCACCATTGAGTCTCTaGGTCACCTCACGGATTTTG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSPLSL*VTSRIL
Trigger: CAAAATCCGTGAGGTGACTCAGAGACTCAATGGTGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACTGGGGAGCTCGTCGTaGGATTTTTCAGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQLGSSS*DFSALY
Trigger: GTACAAAGCTGAAAAATCTCACGACGAGCTCCCCAG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCATGTAGGGGTTCATaGCTGTGGTTGATTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSCRGS*LWLIAA
Trigger: AGCTGCAATCAACCACAGTCATGAACCCCTACATGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGATACCTGGACATGGCTaGAGCAAACTCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQIPGHG*SKLLRV
Trigger: AACTCTGAGGAGTTTGCTGCAGCCATGTCCAGGTAT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGATGGCTTCTGCCACATaGTTCCTCTTAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGMASAT*FLLASS
Trigger: ACTGGACGCTAAGAGGAAGCATGTGGCAGAAGCCAT...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACTTGCAGATGGCTTCTaGCACATGCTTCCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQLADGF*HMLPLS
Trigger: GCTAAGAGGAAGCATGTGGCAGAAGCCATCTGCAAG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTCTTGCAGATGGCTTCTaGCACATGCTTCCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFLADGF*HMLPLS
Trigger: GCTAAGAGGAAGCATGTGGCAGAAGCCATCTGCAAG...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCAGTCTGTGTCACTTGTaGTACCATCCCATACTTATT +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVSLCHL*YHPILI
Trigger: AATAAGTATGGGATGGTAGCACAAGTGACACAGACT...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCAGTGATGTGGATTTGGTaGTCTCAAATGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DMVVNRLVSTKDTQISRAVMWIW*SQMRGP
Trigger: TGGGCCTCGCATTTGAGAGCACCAAATCCACATCAC...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACACAAGAGAGATGTGACTaGTTCATCACTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATQERCD*FITEAS
Trigger: AGAGGCCTCAGTGATGAAGCAGTCACATCTCTCTTG...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCAATCTTCATCCCCAGTaGAGTCATCTTGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVNLHPQ*SHLESV
Trigger: AACAGATTCAAGATGACTGCACTGGGGATGAAGATT...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp GGAGGTGAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCAATCTTCATCCCCAGTaGAGTCATCTTGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: GGEGEGSIFISSCYLVGANLHPQ*SHLESV
Trigger: AACAGATTCAAGATGACTGCACTGGGGATGAAGATT...GGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp AGAAACAGATTTGTAGAGTTGATAGTTCCGAGAGAATTTTCTGAAGTCCATGACGGTCTGTGCTGGTGTTaGCACCACTGTAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RNRFVELIVPREFSEVHDGLCWC*HHCRRR
Trigger: CCGCCTCCTACAGTGGTGGCAACACCAGCACAGACC...GTCATGGACTTCAGAAAATTCTCTCGGAACTATCAACTCTACAAATCTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAAGAGAGGCCAAGCTCTaGATTCAGCTCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQREAKL*IQLILQ
Trigger: CTGGAGAATGAGCTGAATGCAGAGCTTGGCCTCTCT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAACTTACTTGCCAACTTaGTTGCTGGGCACTGGGACT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQTYLPT*LLGTGT
Trigger: AGTCCCAGTGCCCAGCAAGCAAGTTGGCAAGTAAGT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGGAATCTCAATGGTCTaGTCAGGCACGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQGISMV*SGTMMV
Trigger: CACCATCATCGTGCCTGAGCAGACCATTGAGATTCC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAACTGTACGGTTGAGCTaGATGTGGAATCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQTVRLS*MWNPGL
Trigger: CAGTCCTGGATTCCACATGCAGCTCAACCGTACAGT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTCCAGGTCTCTTTCAGTaGATATTTCTGTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTPGLFQ*IFLLPH
Trigger: ATGTGGCAACAGAAATATCCACTGAAAGAGACCTGG...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACACCTCAATCAGCTGTaGCAAGAGAGATGTGACTGC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQHLNQL*QERCDC
Trigger: GCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCACCTCAATCAGCTGTaGCAAGAGAGATGTGACTGC +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGHLNQL*QERCDC
Trigger: GCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTG...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp GAAGACTCCCAGATGCCTTCTGAAGCCATGAGCTCATTGCAACTATTAATTTGGCACCTCAATCAGCTGTaGCAAGAGAGATGTGACTGC +
Preference number: 4 (lower is better)
Translates to: EDSQMPSEAMSSLQLLIWHLNQL*QERCDC
Trigger: GCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTG...CCAAATTAATAGTTGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCTATCAGAAGGGGGTTaGCATGCACACGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNLSEGG*HAHVSA
Trigger: GGCTGAAACGTGTGCATGCCAACCCCCTTCTGATAG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTCAGCGCATACAAGGTaGCTCGGCTGCGCTGATCCC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFSAHTR*LGCADP
Trigger: GGGATCAGCGCAGCCGAGCCACCTTGTATGCGCTGA...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTAGCTTTCCCAGGAGCTaGAGGTCATGGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPSFPRS*RSWRLA
Trigger: TGCCAGTCTCCATGACCTCCAGCTCCTGGGAAAGCT...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGACCTCTCCAATCATCTaGGGGATCCCCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILTSPII*GIPCRV
Trigger: CACTCTGCAGGGGATCCCCCAGATGATTGGAGAGGT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATCCAGACCCGACTCGTaGAAGAAGTTGGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQSRPDS*KKLVFI
Trigger: GATGAACACCAACTTCTTCCACGAGTCGGGTCTGGA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCAGTTCTCAATGAGAGGTaGGATCACCTCCGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPVLNER*DHLRFG
Trigger: ACCAAAACGGAGGTGATCCCACCTCTCATTGAGAAC...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCTGTGGAGCTGGCGTTaGAGTAAGCGCCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQLWSWR*SKRLRC
Trigger: GCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGCCATGCCACCCTCTTaGAAACTGTGGAGCCATAAG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNAMPPS*KLWSHK
Trigger: CTTATGGCTCCACAGTTTCCAAGAGGGTGGCATGGC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTTGGAGTTGCAACTATTAATTTaGAACCCACGTGCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: EGEGSIFISSCYLVGALELQLLI*NPRAGK
Trigger: CTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAA...CTCCAAGGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGCCCGAAGGCTGAAATaGTCTGTGCTGGTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILARRLK*SVLVLP
Trigger: TGGCAACACCAGCACAGACCATTTCAGCCTTCGGGC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCCAAGCTAAGCTTGTaGTCAACTGCTCCTTTAGCG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSKLSL*STAPLA
Trigger: CGCTAAAGGAGCAGTTGACCACAAGCTTAGCTTGGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGAGATCGGTGAACGCTaGGCTTTTGATATTGAGGTG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQEIGER*AFDIEV
Trigger: CACCTCAATATCAAAAGCCCAGCGTTCACCGATCTC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCCCTGGTGCCAGCTTTaGTGCAGGTCCAGTTCATAT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNPWCQL*CRSSSY
Trigger: ATATGAACTGGACCTGCACCAAAGCTGGCACCAGGG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR CAA 72 bp TCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTaGGAGGTAGGAGGAGTTAAACCTCAGGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: SIFISSCYLVGA*EVGGVKPQVGL
Trigger: GAGTCCAACCTGAGGTTTAACTCCTCCTACCTCCAAGGCACCAACCAGATAACAGGAAGATATGAAGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CAA 72 bp GTGAGGGCGGCTTTCCCATCCAGACTGAATTTTGCATaGTGTTCCCTGAAGCGGCCATTTGTTGTTAATTTC +
Preference number: 4 (lower is better)
Translates to: VRAAFPSRLNFA*CSLKRPFVVNF
Trigger: GAAATTAACAACAAATGGCCGCTTCAGGGAACACAATGCAAAATTCAGTCTGGATGGGAAAGCCGCCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CAA 72 bp ACATGCAGCTTCAGGGGTTCTAGCCGTAGTTTCCCATaGTTGGTGAGATCCAGAGCATTGTATTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TCSFRGSSRSFP*LVRSRALYFRS
Trigger: TGACCTGAAATACAATGCTCTGGATCTCACCAACAATGGGAAACTACGGCTAGAACCCCTGAAGCTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGAGGACTGGCTGCTGCTaGTCAGAGTTGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQRTGCC*SELTRG
Trigger: GCCCCTTGTCAACTCTGATCAGCAGCAGCCAGTCCT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCAGGCCCATATTTCCAATaGCCCGCAGAATCAAATAGG +
Preference number: 4 (lower is better)
Translates to: DMVVNRLVSTKDTQISRAGPYFQ*PAESNR
Trigger: CCTATTTGATTCTGCGGGTCATTGGAAATATGGGCC...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAGTTAATATCTGCCTGTaGAGGACTCCTCATCAACAT +
Preference number: 4 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRVNICL*RTPHQH
Trigger: ATGTTGATGAGGAGTCCTTCACAGGCAGATATTAAC...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACAACACCATCAGGAACTTaGCCATTAACCCAGTACAAA +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTTPSGT*PLTQYK
Trigger: TTTGTACTGGGTTAATGGTCAAGTTCCTGATGGTGT...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGCTTTTAGGGCAACATaGGCCTCCAGACCCGACTCG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFAFRAT*ASRPDS
Trigger: CGAGTCGGGTCTGGAGGCTCATGTTGCCCTAAAAGC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CAAAGGAATCTCAATTTTCAAACTGTTCTTGTTCAAGGTATATTTGACCCGGCCGTTGGAGTAAGCGCCTaGGGTGCAGTAATTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QRNLNFQTVLVQGIFDPAVGVSA*GAVIQA
Trigger: GGCCTGAATTACTGCACCTCAGGCGCTTACTCCAAC...GGCCGGGTCAAATATACCTTGAACAAGAACAGTTTGAAAATTGAGATTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAACTCCTTCAGGCTATTaGGGTGGTCTTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQTPSGY*GGLAKS
Trigger: AGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGTGTTAGGATCCCTCTaGCAAGACAGGCCATATGTG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNVLGSL*QDRPYV
Trigger: CACATATGGCCTGTCTTGTCAGAGGGATCCTAACAC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACATTGCATTGTGTTCCCTaGAGCGGCCATTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATLHCVP*SGHLLL
Trigger: TAACAACAAATGGCCGCTTCAGGGAACACAATGCAA...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp CCTCAGTCTGCTTCGCACCTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCAAGCTTAAGTCCTTCTTaGCTGACCTTGAAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PQSASHLLLELQTSGYPPSLSPS*LTLKLK
Trigger: TTTCAACTTCAAGGTCAGTCAAGAAGGACTTAAGCT...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGGTGCGAAGCAGACTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGCTGGAGAACTTCACTaGCTCCTTCAGAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQAGELH*LLQSQR
Trigger: CCGCTGGCTCTGAAGGAGTCAGTGAAGTTCTCCAGC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTTGCGCAGGTCAGCCTaGCTAGAGAAGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILLRRSA*LEKSSL
Trigger: CAAACTGGACTTCTCTAGTCAGGCTGACCTGCGCAA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATGTTCTCCGTTGGTaGAAAAGAGGCCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQYVLRW*KRGPLA
Trigger: AGCTAGAGGGCCTCTTTTTCACCAACGGAGAACATA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTCTGCTCAGGCACGATaGTGGTGGGCAACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILSAQAR*WWATQS
Trigger: ACTTTGAGTTGCCCACCATCATCGTGCCTGAGCAGA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTACACTTCTCTCAGGGTaGGCCCTGTGTGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFTLLSG*ALCVPS
Trigger: ACTGGGAACACACAGGGCTCACCCTGAGAGAAGTGT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCTGGCTTGGCCTTCCTaGGTCAACAGTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLAWPS*VNSSWY
Trigger: GTACCAGGAACTGTTGACTCAGGAAGGCCAAGCCAG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACAAACACGTTATCCTTaGGTCCCTGGAAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQQTRYP*VPGNWL
Trigger: AAGCCAGTTTCCAGGGACTCAAGGATAACGTGTTTG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAGTGGATATTTCTGTTaGCACATTGCCCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSGYFC*HIALPR
Trigger: ACGAGGAAGGGCAATGTGGCAACAGAAATATCCACT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCTTGAAGCGATCACACTaGCCCAGGTCTCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALLKRSH*PRSLSV
Trigger: CACTGAAAGAGACCTGGGGCAGTGTGATCGCTTCAA...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATATGGCTTCTGCCACATaGTTCCTCTTAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNMASAT*FLLASS
Trigger: ACTGGACGCTAAGAGGAAGCATGTGGCAGAAGCCAT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp AGCTCATTGCAACTATTAATTTGGAACCCACGTGCCGGAAAGTCATGTCTGTTTAGAGGTGTTGCTCCTTaGAGATGGCTTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: SSLQLLIWNPRAGKSCLFRGVAP*RWLLPH
Trigger: ATGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCT...AAACAGACATGACTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCAGTGATGTGGATTTGGTaGTCTCAAATGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPVMWIW*SQMRGP
Trigger: TGGGCCTCGCATTTGAGAGCACCAAATCCACATCAC...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
CDS-3UTR GCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGAAAACAGCTTCGGCCTaGTTTGGAGGTGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGKTASA*FGGDVD
Trigger: ATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTT...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp GGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATCAAAAGTTCTGGAGTTAACTaGTCCATGGTTTGGCCCATA +
Preference number: 4 (lower is better)
Translates to: GVNCSMVWPIFPMTRRIKSSGVN*SMVWPI
Trigger: TATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT...TTTGATTCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATCAAACTTCTGGCTTCTGCTTaGAAACGGGGTATGGAAATA +
Preference number: 4 (lower is better)
Translates to: GVNCSMVWPIFPMTRRIKLLASA*KRGMEI
Trigger: TATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAG...TTTGATTCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCGCAGCAGTGCATTTTaGTTAGAGAAGGTCATATCC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQRSSAF*LEKVIS
Trigger: GGATATGACCTTCTCTAAGCAAAATGCACTGCTGCG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTCCAGGTGCCTGTCTaGTCAGCTGGAGTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFFQVPV*SAGVSR
Trigger: CCTGCTTACTCCAGCTGAGCAGACAGGCACCTGGAA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGGCAGTGATGGAAGCTaGGATACCTGCTTCGTTTGC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILGSDGS*DTCFVC
Trigger: GCAAACGAAGCAGGTATCGCAGCTTCCATCACTGCC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATACACTGTGGCCCACATaGTGGGAATCGACTTGTGAT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNTLWPT*WESTCD
Trigger: ATCACAAGTCGATTCCCAGCATGTGGGCCACAGTGT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAAGCTTGTGGTCAACTaGTCCTTTAGCGGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQKLVVN*SFSGRV
Trigger: TACTCTACCGCTAAAGGAGCAGTTGACCACAAGCTT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCATCAATTTTGGAAGTaGCCTGCAGCTTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQHQFWK*PAASLK
Trigger: CTTCAGTGAAGCTGCAGGGCACTTCCAAAATTGATG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAACAAGAGCTGACATTTaGCATGGAGAGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQTRADI*HGESSR
Trigger: CCTGGAACTCTCTCCATGGCAAATGTCAGCTCTTGT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCTTCATCCATATCCATaGCCACGGTGCCTACGGCTG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLHPYP*PRCLRL
Trigger: CAGCCGTAGGCACCGTGGGCATGGATATGGATGAAG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTGGTGCCAGCTTTGGTaGAGGTCCAGTTCATATGTG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNWCQLW*RSSSYV
Trigger: CACATATGAACTGGACCTGCACCAAAGCTGGCACCA...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAGCGGCTGTTGATCTTTaGTGTGTCTTCAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRAAVDL*CVFKFQ
Trigger: TTGAAACTTGAAGACACACCAAAGATCAACAGCCGC...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCAAGAGATTAGCTCTCTaGATATTTTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVKRLAL*IFCSEM
Trigger: CATCTCTGAGCAAAATATCCAGAGAGCTAATCTCTT...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTGGATGGCAGCTTTCTaGATCATCAGTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQWMAAF*IISDGF
Trigger: AAAGCCATCACTGATGATCCAGAAAGCTGCCATCCA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GAGGGAGAGGGTTCCATCTTCATATCTTCCTGTTATCTGGTTGGTGCCTTGGAGGAAGTCCATGACAGTTaGAAGTTGAGATTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: EGEGSIFISSCYLVGALEEVHDS*KLRFFQ
Trigger: CTGAAAGAATCTCAACTTCCAACTGTCATGGACTTC...CTCCAAGGCACCAACCAGATAACAGGAAGATATGAAGATGGAACCCTCTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTGCGGAGGTAGGCTCTaGCTTCCGGGACTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQCGGRL*LPGLLW
Trigger: CCAAAGAAGTCCCGGAAGCCAGAGCCTACCTCCGCA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGTAATCCAGCTCCAGTaGGGAGTTCAAAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQVIQLQ*GVQRHS
Trigger: AGAATGCCTTTGAACTCCCCACTGGAGCTGGATTAC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACAGTTCAGCCTGCATGTTaGCTACTTCCAGTTTTACTC +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATVQPAC*LLPVLL
Trigger: GAGTAAAACTGGAAGTAGCCAACATGCAGGCTGAAC...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCTCCAGACCCGACTCGTaGAAGAAGTTGGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALSRPDS*KKLVFI
Trigger: GATGAACACCAACTTCTTCCACGAGTCGGGTCTGGA...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTAGGAGGCGGAGTCTGTaGAGCTGGCGTTGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFRRRSL*SWRWSK
Trigger: CTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTTGGAGAAGCAGTTTaGCAGGCGACCAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFFGEAV*QATSGR
Trigger: TCGCCCACTGGTCGCCTGCCAAACTGCTTCTCCAAA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTCAGGCTATTGAGGTaGTCTTGCAAAGTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQFRLLR*SCKVWV
Trigger: TACCCAGACTTTGCAAGACCACCTCAATAGCCTGAA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGCTCATTGCAACTATTAATTTGGAACCCACGTGCCGGAAAGTCATGTCTGTTTGGCAATCCCATGTTCTaGAGGTTGAACTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSLQLLIWNPRAGKSCLFGNPMF*RLNSFR
Trigger: CCTGAAGGAGTTCAACCTCCAGAACATGGGATTGCC...AAACAGACATGACTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATGCTGTAGACATTCGTaGAGAGGTCTAGAACACCCA +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQCCRHS*RGLEHP
Trigger: TGGGTGTTCTAGACCTCTCCACGAATGTCTACAGCA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GGACAAGGTCATACTCTGCCGATTATATTTGAATGTCATGGTAGCCTCAGTCTGTGCTGTAGACATTCGTaGAGAGGTCTAGAACACCCA +
Preference number: 4 (lower is better)
Translates to: GQGHTLPIIFECHGSLSLCCRHS*RGLEHP
Trigger: TGGGTGTTCTAGACCTCTCCACGAATGTCTACAGCA...CAGACTGAGGCTACCATGACATTCAAATATAATCGGCAGAGTATGACCTTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGGAATCTAGAAATTTGTaGCGTAGAGACCCATCACAT +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRESRNL*RRDPSH
Trigger: ATGTGATGGGTCTCTACGCCACAAATTTCTAGATTC...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp GAACTCCTTCAGGCTATTGAGGTGGTCTTGCAAAGTCTGGGTATAAGGAAGACTGTAGATATTCCATCTTaGCCAATCCTTAGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: ELLQAIEVVLQSLGIRKTVDIPS*PILSVA
Trigger: GGCGACACTAAGGATTGGCCAAGATGGAATATCTAC...AGTCTTCCTTATACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGAGAGAGTTCCAGGGTaGCTTTGCTTGTATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQERVPG*LCLYVL
Trigger: GAGAACATACAAGCAAAGCCACCCTGGAACTCTCTC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTTCAGGGCCACTTCCTaGCCAAGGTCAGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILFRATS*PRSGKS
Trigger: TGATTTCCCTGACCTTGGCCAGGAAGTGGCCCTGAA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCCACTGGCTGCTTTCTaGAACCTCACGTCGATATCA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNPLAAF*NLTSIS
Trigger: TGATATCGACGTGAGGTTCCAGAAAGCAGCCAGTGG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR CAA 72 bp GGCTTTGTACTTTGGACACATTTCAGGATTGAAGACTaGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GFVLWTHFRIED*SSGVNCSMVWP
Trigger: GGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTCTTCAATCCTGAAATGTGTCCAAAGTACAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp GAGACCAAATGTAATGTGTTGCCTCCACTGAGCAGCTaGACTGGTCTCTTTGGGGAAGGAATGATAAACTTC +
Preference number: 4 (lower is better)
Translates to: ETKCNVLPPLSS*TGLFGEGMINF
Trigger: GAAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGGCAACACATTACATTTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp CAGTTGATACAACTTGGGAATGGTAAAAGTAGGGACTaGGAACTCTCGAGATGGCAGATGGAATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: QLIQLGNGKSRD*ELSRWQMESHR
Trigger: TCTGTGGGATTCCATCTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTACCATTCCCAAGTTGTATCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGCTCAACCTTGCAGTTaGTCCTGGTGGCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFAQPCS*SWWHFL
Trigger: CAAGAAGTGCCACCAGGATCAACTGCAAGGTTGAGC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TTTGGTGTGTCTTCAAGTTTCAAAGTCTGTGTCACTTGTGCTACCATCCCATACTCATCAAGGAAAGTCTaGAGAAGAACCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FGVSSSFKVCVTCATIPYSSRKV*RRTSWS
Trigger: GGACCAGGAGGTTCTTCTTCAGACTTTCCTTGATGA...GTATGGGATGGTAGCACAAGTGACACAGACTTTGAAACTTGAAGACACACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTCCAAGCCAATCTCGATaGGGTCAGCTGAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPPSQSR*GQLKQI
Trigger: GATTTGCTTCAGCTGACCTCATCGAGATTGGCTTGG...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGACTTGCTTGCAAACTaGCCAGGACTGCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFDLLAN*PGLPVL
Trigger: GAGAACAGGCAGTCCTGGTCAGTTTGCAAGCAAGTC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTTGGAGTAAGCGCCTaGGGTGCAGTAATTCAGGCC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFVGVSA*GAVIQA
Trigger: GGCCTGAATTACTGCACCTCAGGCGCTTACTCCAAC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TTTGGTGTGTCTTCAAGTTTCAAAGTCTGTGTCACTTGTGCTACCATCCCATACGCTCATAGGTTGCGCTaGCAGAATACTGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: FGVSSSFKVCVTCATIPYAHRLR*QNTAQS
Trigger: AGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGC...GTATGGGATGGTAGCACAAGTGACACAGACTTTGAAACTTGAAGACACACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATTCGCACCTTCTGCTTaGGTTACAAACTTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQFAPSA*VTNFRV
Trigger: TACCCTGAAGTTTGTAACTCAAGCAGAAGGTGCGAA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCTCCCAGATGCCTTCTaGAGCCATGAGCTCATTGCA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLPDAF*SHELIA
Trigger: TGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CAAAGGAATCTCAATTTTCAAACTGTTCTTGTTCAAGGTATATTTGACCCGGCCCTCCCAGATGCCTTCTaGAGCCATGAGCTCATTGCA +
Preference number: 4 (lower is better)
Translates to: QRNLNFQTVLVQGIFDPALPDAF*SHELIA
Trigger: TGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAG...GGCCGGGTCAAATATACCTTGAACAAGAACAGTTTGAAAATTGAGATTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTGTTCAAGGTATATTTaGCCCGGCCATCGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQCSRYI*PGHRFL
Trigger: TAAAAAGCGATGGCCGGGTCAAATATACCTTGAACA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATCAAATGTTCAAGGTATATTTaGCCCGGCCATCGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: GVNCSMVWPIFPMTRRIKCSRYI*PGHRFL
Trigger: TAAAAAGCGATGGCCGGGTCAAATATACCTTGAACA...TTTGATTCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATAGAGGCACTTGCAGTTaGTACAACTTGGGAATGGTA +
Preference number: 4 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHRGTCS*YNLGMV
Trigger: TACCATTCCCAAGTTGTATCAACTGCAAGTGCCTCT...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGCCCATCATGTCATTTaGGAGCTTAAGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQAHHVI*ELKSFL
Trigger: CAAGAAGGACTTAAGCTCTCAAATGACATGATGGGC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGTTTCCCATTGTTGGTaGGATCCAGAGCATTGTATT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQVSHCW*DPEHCI
Trigger: AATACAATGCTCTGGATCTCACCAACAATGGGAAAC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCTTTCAACAGTGTCTTaGTCTCGTTGCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILLSTVS*SRCAGQ
Trigger: CTGACCTGCGCAACGAGATCAAGACACTGTTGAAAG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATGTGTTCCCTCATCTaGGAATCTGGGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQMCSLI*ESGAGP
Trigger: TGGGCCTGCCCCAGATTCTCAGATGAGGGAACACAT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTTTGTGGATGCCGTaGTCTCAAATGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFCLWMP*SQMAGL
Trigger: CAGCCCAGCCATTTGAGATCACGGCATCCACAAACA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCTCACAGTACTGTTATaGCTACCCTCCACAAATTTG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQLTVLL*LPSTNL
Trigger: CAAATTTGTGGAGGGTAGTCATAACAGTACTGTGAG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTGGAAAGACCCAGAATaGATCCGGACTTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQWKDPE*IRTSFF
Trigger: GAAAAATGAAGTCCGGATTCATTCTGGGTCTTTCCA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTACAGGGATGGAGAATaGATAGCCATTGGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQYRDGE*IAIGVF
Trigger: AAAAACCCCAATGGCTATTCATTCTCCATCCCTGTA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAAGCAGCAATGCCATCTaGAACACTTTTTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQSSNAI*NTFWKR
Trigger: ACGCTTCCAAAAAGTGTTTCAGATGGCATTGCTGCT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TTTGGTGTGTCTTCAAGTTTCAAAGTCTGTGTCACTTGTGCTACCATCCCATACAAAACAGCTTCGGCCTaGTTTGGAGGTGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: FGVSSSFKVCVTCATIPYKTASA*FGGDVD
Trigger: ATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTT...GTATGGGATGGTAGCACAAGTGACACAGACTTTGAAACTTGAAGACACACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGAGAAGGGGGTTGGCATaGACACGTTTCAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQRRGLA*TRFSHW
Trigger: CCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATAAGTTCTGGAGTTAACTaGTCCATGGTTTGGCCCATA +
Preference number: 4 (lower is better)
Translates to: EFETSLTWLSTGLSLLKISSGVN*SMVWPI
Trigger: TATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT...TATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp AGTTACAAACTTCAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATAACAAAGTTCTTCACTTaGTCATTCTGTTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: SYKLQGIHQGSVLSLELITKFFT*SFCSHG
Trigger: ACCATGGGAACAGAATGAGCAAGTGAAGAACTTTGT...TATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTGAAGTTTGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACCCATTTACCATATCCTaGTCATGTTTATCATCTTTG +
Preference number: 4 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHPFTIS*SCLSSL
Trigger: CAAAGATGATAAACATGAGCAGGATATGGTAAATGG...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp AGCTCATTGCAACTATTAATTTGGAACCCACGTGCCGGAAAGTCATGTCTGTTTCAAACTGACCAGGACTaGCTGTTCTCAATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSLQLLIWNPRAGKSCLFQTDQD*LFSMRG
Trigger: ACCTCTCATTGAGAACAGGCAGTCCTGGTCAGTTTG...AAACAGACATGACTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAATGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCAGGAAAGACTTGCTTaGAAACTGACCAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILQERLA*KLTRTA
Trigger: GGCAGTCCTGGTCAGTTTGCAAGCAAGTCTTTCCTG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTCAGGAAAGACTTGCTTaGAAACTGACCAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPQERLA*KLTRTA
Trigger: GGCAGTCCTGGTCAGTTTGCAAGCAAGTCTTTCCTG...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGAGTAAGCGCCTGAGGTaGAGTAATTCAGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILSKRLR*SNSGQE
Trigger: TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TGTAAAGTGATGGGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGACAAGGTCATACTCTaGCGATTATATTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: CKVMGLDTSISCGKRDVTDKVIL*RLYLNV
Trigger: GACATTCAAATATAATCGGCAGAGTATGACCTTGTC...AGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCCCATCACTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTCTCACTTCTGGCTTCTaGTTGCAAACGGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPLTSGF*LQTGYG
Trigger: TCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGATCCAGACTGAATTTTaGATTGTGTTCCCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQIQTEF*IVFPEA
Trigger: CGCTTCAGGGAACACAATGCAAAATTCAGTCTGGAT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGCTTTCCAGATACACTaGAACTGTGGCCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNAFQIH*NCGLGF
Trigger: GAAACCAAGGCCACAGTTGCAGTGTATCTGGAAAGC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCACTGAAGACCGTGTaGTCTTGGAATTCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSLKTV*SWNSSK
Trigger: CTTACTTGAATTCCAAGAGCACACGGTCTTCAGTGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGTTCCAGGGTGGCTTTaGTTGTATGTTCTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILVPGWL*LYVLRW
Trigger: CCAACGGAGAACATACAAGCAAAGCCACCCTGGAAC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTGCAATGTCAAGGTGTaGCTTTTCTTGGTCATTGGA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQCNVKV*LFLVIG
Trigger: TCCAATGACCAAGAAAAGGCACACCTTGACATTGCA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGTCTACCTCAAAGCGTaGAGTCAGTGCTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNVYLKA*SQCLKG
Trigger: TCCTTTCAAGCACTGACTGCACGCTTTGAGGTAGAC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGATCTTCTTCATATTCTaGACTGAAGTCACGGTGTGC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQIFFIF*TEVTVC
Trigger: GCACACCGTGACTTCAGTGCAGAATATGAAGAAGAT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp AGCTCATTGCAACTATTAATTTGGAACCCACGTGCCGGAAAGTCATGTCTGTTTTATCCTGGACATGGCTaGAGCAAACTCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSLQLLIWNPRAGKSCLFYPGHG*SKLLRV
Trigger: AACTCTGAGGAGTTTGCTGCAGCCATGTCCAGGATA...AAACAGACATGACTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAATGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTCGGGTCGCATCTTTTaGACAGACCAGGCTGACATT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILSGRIF*TDQADI
Trigger: AATGTCAGCCTGGTCTGTCCAAAAGATGCGACCCGA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GGTCTCTTTGGGGAAGGAATGATAAACTTCAGCTTCCCAGCTTTTAGGGCAACACCAGGTCTCTTTCAGTaGATATTTCTGTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: GLFGEGMINFSFPAFRATPGLFQ*IFLLPH
Trigger: ATGTGGCAACAGAAATATCCACTGAAAGAGACCTGG...TGTTGCCCTAAAAGCTGGGAAGCTGAAGTTTATCATTCCTTCCCCAAAGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTACTGGAGGATGTGAGTaGAGCACTGAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFTGGCE*STEAVH
Trigger: GTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGAACTGCTCCATGGTTTaGCCCATATTTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGNCSMV*PIFPMT
Trigger: GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTT...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp GACTTGAGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCGAGTTAACTGCTCCATaGTTTGGCCCATATTTCCAA +
Preference number: 4 (lower is better)
Translates to: DLSSGVNCSMVWPIFPMTELTAP*FGPYFQ
Trigger: TTGGAAATATGGGCCAAACCATGGAGCAGTTAACTC...GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTGATGGCTTTGTACTTTaGACACATTTCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTDGFVL*THFRIE
Trigger: TTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATC...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGGATGGCTTTGTACTTTaGACACATTTCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: SLELIGCADRILLNLSCRDGFVL*THFRIE
Trigger: TTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATC...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp ATATTCGAATCTAGAAATTTGTGGCGTAGAGACCCATCACATGATAGTGTGAACTCCGCAGAGCCTGGATaGCAGCTTTCTGGATCATCA +
Preference number: 4 (lower is better)
Translates to: IFESRNLWRRDPSHDSVNSAEPG*QLSGSS
Trigger: TGATGATCCAGAAAGCTGCCATCCAGGCTCTGCGGA...GTTCACACTATCATGTGATGGGTCTCTACGCCACAAATTTCTAGATTCGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACAGAAGTCCATGACAGTTaGAAGTTGAGATTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LVSTKDTQISRACWCTSTEVHDS*KLRFFQ
Trigger: CTGAAAGAATCTCAACTTCCAACTGTCATGGACTTC...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGATTCCCTTCTATTTTaGCTGAGGCTGGGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNDSLLF*LRLGQV
Trigger: CACTTGACCCAGCCTCAGCCAAAATAGAAGGGAATC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTCATGTTTATCATCTTTaGTATAGCCAAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTHVYHL*YSQSGP
Trigger: TGGACCACTTTGGCTATACCAAAGATGATAAACATG...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTAGCTTTCCCAGGAGCTaGAGGTCATGGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFSFPRS*RSWRLA
Trigger: TGCCAGTCTCCATGACCTCCAGCTCCTGGGAAAGCT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGTTCAGCCTGCATGTTaGCTACTTCCAGTTTTACTC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQVQPAC*LLPVLL
Trigger: GAGTAAAACTGGAAGTAGCCAACATGCAGGCTGAAC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGACTCGTGGAAGAAGTTaGTGTTCATCTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILTRGRS*CSSGPH
Trigger: GTGGGGTCCAGATGAACACCAACTTCTTCCACGAGT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAATCCAGACCCGACTCGTaGAAGAAGTTGGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKSRPDS*KKLVFI
Trigger: GATGAACACCAACTTCTTCCACGAGTCGGGTCTGGA...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCACTGAGCAGCTTGACTaGTCTCTTTGGGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALTEQLD*SLWGRN
Trigger: ATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGT...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGTGTCACAACTTAGGTaGCCCATGAGGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQVSQLR*PMRATS
Trigger: TGAGGTCGCCCTCATGGGCCACCTAAGTTGTGACAC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTGCAGATGAGTCCATTTaGAGAAGCAGTTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPADESI*RSSLAG
Trigger: GCCTGCCAAACTGCTTCTCCAAATGGACTCATCTGC...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GAAGACTCCCAGATGCCTTCTGAAGCCATGAGCTCATTGCAACTATTAATTTGGTTCAGGCTATTGAGGTaGTCTTGCAAAGTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: EDSQMPSEAMSSLQLLIWFRLLR*SCKVWV
Trigger: TACCCAGACTTTGCAAGACCACCTCAATAGCCTGAA...CCAAATTAATAGTTGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAGTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp AGTTCTGGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAACATCTTTAGATCTCTaGAGGATTTGCCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: SSGVNCSMVWPIFPMTRRTSLDL*RICHQK
Trigger: CTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGT...TCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACTCTCGAGATGGCAGATaGAATCCCACAGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: QESISIHMQALRIIGEIHSRDGR*NPTDLK
Trigger: CTTCAAGTCTGTGGGATTCCATCTGCCATCTCGAGA...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCGAGATGATGACTTGTaGAGCCTTTGTAATCATGAG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQRDDDL*SLCNHE
Trigger: CTCATGATTACAAAGGCTCCACAAGTCATCATCTCG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCCTGAGATATATATCTaGAACGGGCCACTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILPEIYI*NGPLQL
Trigger: GAGCTGCAGTGGCCCGTTCCAGATATATATCTCAGG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGCAGTTAGAACACTGTaGCCCACATGCTGGGAATCG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFAVRTL*PTCWES
Trigger: CGATTCCCAGCATGTGGGCCACAGTGTTCTAACTGC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGCCAACTTGCTTGCTaGGCACTGGGACTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFCQLAC*ALGLRN
Trigger: GTTTCTGAGTCCCAGTGCCCAGCAAGCAAGTTGGCA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATCAGAGACAGAGCTGTaGCTAACTTCAATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQSETEL*LTSIPF
Trigger: AAAGGGGATTGAAGTTAGCCACAGCTCTGTCTCTGA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAGGGAATATATGCGTTaGAGTGTGGCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNREYMR*SVASPA
Trigger: TGCTGGAGAAGCCACACTCCAACGCATATATTCCCT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCTGTAAATGGGACATaGAACGTAGGCATGACAAGA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSVNGT*NVGMTR
Trigger: TCTTGTCATGCCTACGTTCCATGTCCCATTTACAGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAACTGGCACTCCAAGTaGCATTATACACGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNNWHSK*HYTRES
Trigger: ACTCTCCCGTGTATAATGCCACTTGGAGTGCCAGTT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGGCTGGCTCACTGTATaGTTTTATCAATATAGGCAG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQGWLTV*FYQYRQ
Trigger: CTGCCTATATTGATAAAACCATACAGTGAGCCAGCC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTCCATACACGGTATCCTaGACATGGCTGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFPYTVS*TWLQQT
Trigger: AGTTTGCTGCAGCCATGTCCAGGATACCGTGTATGG...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGACTTCCGGAGGTGCTTaGATCGGGTCGCATCTTTTG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQTSGGA*IGSHLL
Trigger: CAAAAGATGCGACCCGATTCAAGCACCTCCGGAAGT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCAAAGAAGCGGCTGTTaGTCTTTGGTGTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNQRSGC*SLVCLQ
Trigger: TTGAAGACACACCAAAGATCAACAGCCGCTTCTTTG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGGCCCATATTTCCAATaGCCCGCAGAATCAAATAGG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILGPYFQ*PAESNR
Trigger: CCTATTTGATTCTGCGGGTCATTGGAAATATGGGCC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGTTTCTGGATCATCAGTaGTGGCTTTGTACTTTGGAC +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGFLDHQ*WLCTLD
Trigger: GTCCAAAGTACAAAGCCATCACTGATGATCCAGAAA...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGATGACAGTTGGAAGTTaGGATTCTTTCAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQMTVGS*DSFRAS
Trigger: AGAAGCTCTGAAAGAATCTCAACTTCCAACTGTCAT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAGTACAAAGCTTTGTTaGCACTGTCTGGGAAAAATC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSTKLC*HCLGKI
Trigger: GATTTTTCCCAGACAGTGTCAACAAAGCTTTGTACT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAATGGCTCCGGGAGCAATaGCTCCAGATGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKWLREQ*LQMKIF
Trigger: AAATATCTTCATCTGGAGTCATTGCTCCCGGAGCCA...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp AGAAACAGATTTGTAGAGTTGATAGTTCCGAGAGAATTTTCTGAAGTCCATGACGACTTGCTTGCAAACTaGCCAGGACTGCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RNRFVELIVPREFSEVHDDLLAN*PGLPVL
Trigger: GAGAACAGGCAGTCCTGGTCAGTTTGCAAGCAAGTC...GTCATGGACTTCAGAAAATTCTCTCGGAACTATCAACTCTACAAATCTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTCTGAATGTCCAGGGTaGGTCTGTAAGACGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILSECPG*VCKTFC
Trigger: GCAAAACGTCTTACAGACTCACCCTGGACATTCAGA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAATCTGAATGTCCAGGGTaGGTCTGTAAGACGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKSECPG*VCKTFC
Trigger: GCAAAACGTCTTACAGACTCACCCTGGACATTCAGA...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTTTGGAGTCCAAATaGACTGAAGCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQFLESK*TEADIC
Trigger: ACAGATGTCTGCTTCAGTTCATTTGGACTCCAAAAA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTGTTTCCCATTGTTGGTaGGATCCAGAGCATTGTATT +
Preference number: 4 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFVSHCW*DPEHCI
Trigger: AATACAATGCTCTGGATCTCACCAACAATGGGAAAC...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCCTGAATTTCACCATTaGGTCTCTGAGTCACCTCAC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILPEFHH*VSESPH
Trigger: GTGAGGTGACTCAGAGACTCAATGGTGAAATTCAGG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGGAAGTCTGGCAGGGTaGTTCTCGCTAGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFGSLAG*FSLEEC
Trigger: ACATTCCTCTAGCGAGAATCACCCTGCCAGACTTCC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGACTTGCCACTGTGTTTaGTTTTCCCTCAATAGCATT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQTCHCV*FSLNSI
Trigger: AATGCTATTGAGGGAAAATCAAACACAGTGGCAAGT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAAGGATTTGATGCTCTaGCTGATAAACTCACAAAGC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQKDLML*LINSQS
Trigger: GCTTTGTGAGTTTATCAGTCAGAGCATCAAATCCTT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTGTATCCAGGAATTTaGAAGGTCCTGGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFVYPGI*KVLGSS
Trigger: CGAGCTCCCCAGGACCTTTCAAATTCCTGGATACAC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGAGACACTTCAACATTaGCAACTGGAACAGTGTATC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQETLQH*QLEQCI
Trigger: GATACACTGTTCCAGTTGTCAATGTTGAAGTGTCTC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGACTGCAGTGCATCAATaGCAGATGAAGATGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQTAVHQ*QMKMKK
Trigger: TTTCTTCATCTTCATCTGTCATTGATGCACTGCAGT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGCACGATGGAACCTaGAGATCTGTAAATGGGACA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNLHDGT*RSVNGT
Trigger: TGTCCCATTTACAGATCTTCAGGTTCCATCGTGCAA...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCACTTTTTGGAAGCGTaGACTGGGACACAGTTAACT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNHFLEA*TGTQLT
Trigger: AGTTAACTGTGTCCCAGTTCACGCTTCCAAAAAGTG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAATTGTAAAAGGTCCTaGAGATTACGTAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQNCKRS*RLRSTS
Trigger: AGAGGTGCTACGTAATCTTCAGGACCTTTTACAATT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTGCTCAACTTGACTTaGGAGTTGGGAAGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQLLNLT*ELGSKV
Trigger: AACTTTACTTCCCAACTCTCAAGTCAAGTTGAGCAA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAGAAATTGCTCAACTTaGCTTGAGAGTTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQRNCST*LESWEV
Trigger: TACTTCCCAACTCTCAAGTCAAGTTGAGCAATTTCT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GAAGACTCCCAGATGCCTTCTGAAGCCATGAGCTCATTGCAACTATTAATTTGGGTCACAACTTCTGCTTaGGTTACAAACTTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: EDSQMPSEAMSSLQLLIWVTTSA*VTNFRV
Trigger: TACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGAC...CCAAATTAATAGTTGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAGTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
CDS-3UTR GCA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACAGTGGATATTTCTGTTaGCACATTGCCCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: QESISIHMQALRIIGEIHSGYFC*HIALPR
Trigger: ACGAGGAAGGGCAATGTGGCAACAGAAATATCCACT...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGCCACCAGTTCAGCCTaGATGTTGGCTACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFATSSA*MLATSS
Trigger: ACTGGAAGTAGCCAACATGCAGGCTGAACTGGTGGC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCCTGCTTCGCACCTTCTaGTTGAGTTACAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALLLRTF*LSYKLQ
Trigger: CTGAAGTTTGTAACTCAAGCAGAAGGTGCGAAGCAG...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCTTCTGGCTTCTGCTTaGAAACGGGGTATGGAAATA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNLLASA*KRGMEI
Trigger: TATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GAAGAGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATAATTTGGAACCCACGTaGCGGAAAGTCATGTCTGTT +
Preference number: 4 (lower is better)
Translates to: EEKSSDKPAMFRLFVWSNNLEPT*RKVMSV
Trigger: AACAGACATGACTTTCCGGCACGTGGGTTCCAAATT...ATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp CAGGAGTCTATTAGCATACATATGCAAGCTCTTAGGATAATCGGAGAGATCCACAATTTGGAACCCACGTaGCGGAAAGTCATGTCTGTT +
Preference number: 4 (lower is better)
Translates to: QESISIHMQALRIIGEIHNLEPT*RKVMSV
Trigger: AACAGACATGACTTTCCGGCACGTGGGTTCCAAATT...GTGGATCTCTCCGATTATCCTAAGAGCTTGCATATGTATGCTAATAGACTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATGAAGAGACTCTGAACTaGCCATCAATCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHEETLN*PSILTS
Trigger: AGAAGTCAAGATTGATGGGCAGTTCAGAGTCTCTTC...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp GAAGACTCCCAGATGCCTTCTGAAGCCATGAGCTCATTGCAACTATTAATTTGGATCCAGACTGAATTTTaGATTGTGTTCCCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: EDSQMPSEAMSSLQLLIWIQTEF*IVFPEA
Trigger: CGCTTCAGGGAACACAATGCAAAATTCAGTCTGGAT...CCAAATTAATAGTTGCAATGAGCTCATGGCTTCAGAAGGCATCTGGGAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGAGGTTACCAGCCACATaGAGCTTCAGGGGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQRLPAT*SFRGSS
Trigger: GCTAGAACCCCTGAAGCTGCATGTGGCTGGTAACCT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAACTTTCCAGCTAGGTaGTGGATGTCTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQNFPAR*WMSIFC
Trigger: ACAGAATATAGACATCCAGCACCTAGCTGGAAAGTT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGACTTGCCAACTTGCTTaGTGGGCACTGGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQTCQLA*WALGLR
Trigger: TCTGAGTCCCAGTGCCCAGCAAGCAAGTTGGCAAGT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCCTCCACAAATTTGTTaGTCAGAGACAGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILPPQIC*SETELW
Trigger: CCACAGCTCTGTCTCTGAGCAACAAATTTGTGGAGG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGGGCAACTCAAAGTCTaGGATCTTGTTGGCTACTGC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFGQLKV*DLVGYC
Trigger: GCAGTAGCCAACAAGATCGCAGACTTTGAGTTGCCC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCACTCAGCATTGTTCTaGAGATTTCTTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQHSALF*RFLLSF
Trigger: AAAGCTGAGAAGAAATCTGCAGAACAATGCTGAGTG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGCTCATACCTGGACATaGCTGCAGCAAACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFAHTWT*LQQTPQ
Trigger: CTGAGGAGTTTGCTGCAGCCATGTCCAGGTATGAGC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACCAGGTCTCTTTCAGTaGATATTTCTGTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQPGLFQ*IFLLPH
Trigger: ATGTGGCAACAGAAATATCCACTGAAAGAGACCTGG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGGCGGCTGTTGATCTTTaGTGTGTCTTCAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGAAVDL*CVFKFQ
Trigger: TTGAAACTTGAAGACACACCAAAGATCAACAGCCGC...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAACTGCTCCATGGTTTaGCCCATATTTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNNCSMV*PIFPMT
Trigger: GGTCATTGGAAATATGGGCCAAACCATGGAGCAGTT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTCCGCAGAGCCTGGATaGCAGCTTTCTGGATCATCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQSAEPG*QLSGSS
Trigger: TGATGATCCAGAAAGCTGCCATCCAGGCTCTGCGGA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGAAGTCCATGACAGTTaGAAGTTGAGATTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQEVHDS*KLRFFQ
Trigger: CTGAAAGAATCTCAACTTCCAACTGTCATGGACTTC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTACTGAGCAGCTTGACTaGTCTCTTTGGGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPTEQLD*SLWGRN
Trigger: ATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGT...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGTTCTCAATGAGAGGTaGGATCACCTCCGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILVLNER*DHLRFG
Trigger: ACCAAAACGGAGGTGATCCCACCTCTCATTGAGAAC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGAATTTGGACTTCACTaGACAAGGTCATACTCTGCC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNEFGLH*TRSYSA
Trigger: GGCAGAGTATGACCTTGTCCAGTGAAGTCCAAATTC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATTGCAACTATTAATTTaGAACCCACGTGCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQLQLLI*NPRAGK
Trigger: CTTTCCGGCACGTGGGTTCCAAATTAATAGTTGCAA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GGAGTTAACTGCTCCATGGTTTGGCCCATATTTCCAATGACCCGCAGAATCAAAACATCTTTAGATCTCTaGAGGATTTGCCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: GVNCSMVWPIFPMTRRIKTSLDL*RICHQK
Trigger: CTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGT...TTTGATTCTGCGGGTCATTGGAAATATGGGCCAAACCATGGAGCAGTTAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTTTGGAACTCTCGAGATaGCAGATGGAATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPLELSR*QMESHR
Trigger: TCTGTGGGATTCCATCTGCCATCTCGAGAGTTCCAA...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGTAAAAGTAGGGACTTaGAACTCTCGAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNVKVGT*NSRDGR
Trigger: TCTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTAC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGAATCTAGAAATTTGTaGCGTAGAGACCCATCACAT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQESRNL*RRDPSH
Trigger: ATGTGATGGGTCTCTACGCCACAAATTTCTAGATTC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTTGTGCTCATGTCAATaGCTGAAGCCAGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFLCSCQ*LKPAQR
Trigger: TCGCTGGGCTGGCTTCAGCCATTGACATGAGCACAA...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTATCATTAGCTTGCTGTaGGAGTTTTCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFIISLL*EFSQGC
Trigger: GCAGCCCTGGGAAAACTCCCACAGCAAGCTAATGAT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCCTTCAACTTGTATTaGTGGGCCAACTCTACTAAT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSFNLY*WANSTN
Trigger: ATTAGTAGAGTTGGCCCACCAATACAAGTTGAAGGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATCACTGTTCAGCATCTaGTCAATGGTTCTGATGATC +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQSLFSI*SMVLMI
Trigger: GATCATCAGAACCATTGACCAGATGCTGAACAGTGA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCATCTCTATGGTGAATaGAGACACTTCAACATTGAC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQHLYGE*RHFNID
Trigger: GTCAATGTTGAAGTGTCTCCATTCACCATAGAGATG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTCCTACCAATGCTGGTaGTTACATCCAGCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNSYQCW*LHPALG
Trigger: TCCTAAAGCTGGATGTAACCACCAGCATTGGTAGGA...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAGCCATTGGGGTTTTTaGTGTACACAAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNSHWGF*CTQRQL
Trigger: CAACTGCCTTTGTGTACACCAAAAACCCCAATGGCT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCATAAAGGACCCCTGTaGCCTTGGGCACGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFHKGPL*PWARCL
Trigger: AAGACAACGTGCCCAAGGCCACAGGGGTCCTTTATG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACCGGAAACTGGAATCTaGGGAAGTTCAGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQPETGI*GSSENQ
Trigger: TTGATTTTCTGAACTTCCCCAGATTCCAGTTTCCGG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TCATACTTTAGGGAAGCAGTATTTTTAATGATGCCACTTTGCAGATCAGAGGTGCCATACACGGTATCCTaGACATGGCTGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: SYFREAVFLMMPLCRSEVPYTVS*TWLQQT
Trigger: AGTTTGCTGCAGCCATGTCCAGGATACCGTGTATGG...CACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCCTAAAGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
3UTR CAA 72 bp CGTAGAGACCCATCACATGATAGTGTGAACGTATTCTaGTGGTCATATGTTGTTTCTCCAGATCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: RRDPSHDSVNVF*WSYVVSPDPCT
Trigger: TGTGCAAGGATCTGGAGAAACAACATATGACCACAAGAATACGTTCACACTATCATGTGATGGGTCTCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTGGACAGACCAGGCTaGCATTTTCCAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLDRPG*HFPAFP
Trigger: AGGAAATGCTGGAAAATGTCAGCCTGGTCTGTCCAA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCAATGACAGTTGGAAGTTaGGATTCTTTCAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DMVVNRLVSTKDTQISRAMTVGS*DSFRAS
Trigger: AGAAGCTCTGAAAGAATCTCAACTTCCAACTGTCAT...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp GAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATAAGTACAAAGCTTTGTTaGCACTGTCTGGGAAAAATC +
Preference number: 4 (lower is better)
Translates to: EFETSLTWLSTGLSLLKISTKLC*HCLGKI
Trigger: GATTTTTCCCAGACAGTGTCAACAAAGCTTTGTACT...TATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR TCA 90 bp CTCACTTCTGGCTTCTGCTTGCAAACGGGGTATGGAAATAACACCCTTGATTTTAGTACAAAGCTTTGTTaGCACTGTCTGGGAAAAATC +
Preference number: 4 (lower is better)
Translates to: LTSGFCLQTGYGNNTLDFSTKLC*HCLGKI
Trigger: GATTTTTCCCAGACAGTGTCAACAAAGCTTTGTACT...AAAATCAAGGGTGTTATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR TCA 90 bp GAAGAGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTTGTGTGGTCAAATGTAATTTTCTTGTTCTaGATGTCCAGGGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: EEKSSDKPAMFRLFVWSNVIFLF*MSRVSL
Trigger: CAGACTCACCCTGGACATTCAGAACAAGAAAATTAC...ATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGATAAGCTGTAGCAGATaGGTCCATTTGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILISCSR*VHLEKQ
Trigger: CTGCTTCTCCAAATGGACTCATCTGCTACAGCTTAT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GGACAAGGTCATACTCTGCCGATTATATTTGAATGTCATGGTAGCCTCAGTCTGCATCACATGATAGTGTaGACGTATTCTTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GQGHTLPIIFECHGSLSLHHMIV*TYSCGH
Trigger: ATGACCACAAGAATACGTTCACACTATCATGTGATG...CAGACTGAGGCTACCATGACATTCAAATATAATCGGCAGAGTATGACCTTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCTAAACTCCACACCCTaGACCTTAGCAACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLNSTP*TLATVS
Trigger: AGACACTGTTGCTAAGGTTCAGGGTGTGGAGTTTAG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAACGGAAGACATTGCTaGAATGCAGTGAGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNNGRHC*NAVSLN
Trigger: ATTCAGACTCACTGCATTTCAGCAATGTCTTCCGTT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGCAGGCCCATTTCCATaGCCCTTTTCCAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQAGPFP*PFSRRS
Trigger: ACTTCTTCTGGAAAAGGGTCATGGAAATGGGCCTGC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCAGCCAAAGGATTTGTaGTGGAATGCCTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILQPKDL*WNACVC
Trigger: ACAAACACAGGCATTCCATCACAAATCCTTTGGCTG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGAGATTTCTAGGGACATaGAGGACTGGCAGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILRFLGT*RTGSSN
Trigger: ATTAGAGCTGCCAGTCCTTCATGTCCCTAGAAATCT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTGTGGTTGTTGCCACTaGCACTTCCATATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNCGCCH*HFHIFR
Trigger: ACGAAAAATATGGAAGTGTCAGTGGCAACAACCACA...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGACCTGAACAAGAGCTaGCATTTGCCATGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFDLNKS*HLPWRE
Trigger: CTCTCTCCATGGCAAATGTCAGCTCTTGTTCAGGTC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAGATTTGTATTTCTCTaGAGTCAAGTTTGCACGATG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQRFVFL*SQVCTM
Trigger: CATCGTGCAAACTTGACTTCAGAGAAATACAAATCT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCGTGCAGTCAGTGCTTaGAAGGAAGGAATGACAATT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILRAVSA*KEGMTI
Trigger: AATTGTCATTCCTTCCTTTCAAGCACTGACTGCACG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCAATTAACTTTGATCTaGGTTTCCTCATCAGATTCC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQQLTLI*VSSSDS
Trigger: GGAATCTGATGAGGAAACTCAGATCAAAGTTAATTG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATAGTTAACATTTCCATGTaGTCCAAGAGTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: EFETSLTWLSTGLSLLKIVNISM*SKSHLQ
Trigger: CTGAAGATGACTCTTGGATCACATGGAAATGTTAAC...TATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGAGAGGTGTTGCTCCTTaGAGATGGCTTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQRGVAP*RWLLPH
Trigger: ATGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCTTCATCACTGAGGCCTCTCAGCTCAGTAACCAGCTTATTGAAGAGATTAGCTGCTCTCTGGATATTTTaGTCAGAGATGGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: ASSLRPLSSVTSLLKRLAALWIF*SEMVSF
Trigger: AAAACTAACCATCTCTGAGCAAAATATCCAGAGAGC...AGCTAATCTCTTCAATAAGCTGGTTACTGAGCTGAGAGGCCTCAGTGATGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCAGCTCTCTGGATATTTTaGTCAGAGATGGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPALWIF*SEMVSF
Trigger: AAAACTAACCATCTCTGAGCAAAATATCCAGAGAGC...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGCGCTGACAGAATACTaGTCAATCTCTCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQALTEY*SISPVG
Trigger: GCCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCTGGAGCTCATAGGTTaGGCTGACAGAATACTGCTC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFLELIG*ADRILL
Trigger: GAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTCTTCTGGCTTCTGCTTaGAAACGGGGTATGGAAATA +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPLLASA*KRGMEI
Trigger: TATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAG...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGAATTTGGAACCCACGTaGCGGAAAGTCATGTCTGTT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILNLEPT*RKVMSV
Trigger: AACAGACATGACTTTCCGGCACGTGGGTTCCAAATT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCTGTTATCTGGTTGGTaGCTTGGAGGTAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFLLSGW*LGGRRS
Trigger: ACTCCTCCTACCTCCAAGGCACCAACCAGATAACAG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTTAATGATGCCACTTTaGAGATCAGAGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILLMMPL*RSEVEV
Trigger: CACCTCCACCTCTGATCTGCAAAGTGGCATCATTAA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGAGCGAGTTTCCCATTaGCATTTGTATGTGCATCGA +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILERVSH*HLYVHR
Trigger: TCGATGCACATACAAATGGCAATGGGAAACTCGCTC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAGCATTTCACTCCCATaGTCCGTTCTCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFSISLP*SVLRYL
Trigger: CAAGTACCTGAGAACGGAGCATGGGAGTGAAATGCT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCCTCCCAGTAAACTCTaGCTTCCCTTCTCCAAACAG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFPPSKL*LPFSKQ
Trigger: CTGTTTGGAGAAGGGAAGGCAGAGTTTACTGGGAGG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGAACACATAGCCGAATaGCGACATCTCTATGGTGAA +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILEHIAE*RHLYGE
Trigger: TTCACCATAGAGATGTCGGCATTCGGCTATGTGTTC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTACTAGGCATGCTGACTaGTTTTGGGAACACATAGCC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFTRHAD*FWEHIA
Trigger: GGCTATGTGTTCCCAAAAGCAGTCAGCATGCCTAGT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGCTGTCTCCTACCAATaGTGGTGGTTACATCCAGCT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFAVSYQ*WWLHPA
Trigger: AGCTGGATGTAACCACCAGCATTGGTAGGAGACAGC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGTTGAAACACGAAGATaGTGTCTCCTACCAATGCTG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILVETRR*CLLPML
Trigger: CAGCATTGGTAGGAGACAGCATCTTCGTGTTTCAAC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TTTGGTGTGTCTTCAAGTTTCAAAGTCTGTGTCACTTGTGCTACCATCCCATACCCAGGTCTCTTTCAGTaGATATTTCTGTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: FGVSSSFKVCVTCATIPYPGLFQ*IFLLPH
Trigger: ATGTGGCAACAGAAATATCCACTGAAAGAGACCTGG...GTATGGGATGGTAGCACAAGTGACACAGACTTTGAAACTTGAAGACACACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TATCCTGCTCATGTTTATCATCTTTGGTATAGCCAAAGTGGTCCACTAAGACCTTGGATGGCAGCTTTCTaGATCATCAGTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: YPAHVYHLWYSQSGPLRPWMAAF*IISDGF
Trigger: AAAGCCATCACTGATGATCCAGAAAGCTGCCATCCA...AGGTCTTAGTGGACCACTTTGGCTATACCAAAGATGATAAACATGAGCAGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGAAGATATTGGCAATATaGGAAGCCACAAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQKILAI*EATKFF
Trigger: GAAGAACTTTGTGGCTTCCCATATTGCCAATATCTT...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GAACTCCTTCAGGCTATTGAGGTGGTCTTGCAAAGTCTGGGTATAAGGAAGACTAAGATATTGGCAATATaGGAAGCCACAAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ELLQAIEVVLQSLGIRKTKILAI*EATKFF
Trigger: GAAGAACTTTGTGGCTTCCCATATTGCCAATATCTT...AGTCTTCCTTATACCCAGACTTTGCAAGACCACCTCAATAGCCTGAAGGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTTGACACTGTCTaGGAAAAATCCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNFVDTV*EKSLLP
Trigger: GGGAAGCAAGGATTTTTCCCAGACAGTGTCAACAAA...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGAAGTTGGTGTTCATCTaGACCCCACTCCTAGCGAAG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQKLVFI*TPLLAK
Trigger: CTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGCAGATGAGTCCATTTaGAGAAGCAGTTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQADESI*RSSLAG
Trigger: GCCTGCCAAACTGCTTCTCCAAATGGACTCATCTGC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGGCAATCCCATGTTCTaGAGGTTGAACTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFGNPMF*RLNSFR
Trigger: CCTGAAGGAGTTCAACCTCCAGAACATGGGATTGCC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTGGGATGTGGAAGTCTaGCAATCCCATGTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQWDVEV*QSHVLE
Trigger: CTCCAGAACATGGGATTGCCAGACTTCCACATCCCA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAACATCTTTAGATCTCTaGAGGATTTGCCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQTSLDL*RICHQK
Trigger: CTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGT...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCTCGAGATGGCAGATaGAATCCCACAGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFSRDGR*NPTDLK
Trigger: CTTCAAGTCTGTGGGATTCCATCTGCCATCTCGAGA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTGGAACTCTCGAGATaGCAGATGGAATCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLELSR*QMESHR
Trigger: TCTGTGGGATTCCATCTGCCATCTCGAGAGTTCCAA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTTCCTGTTATCTGGTTaGTGCCTTGGAGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFFLLSG*CLGGRR
Trigger: CCTCCTACCTCCAAGGCACCAACCAGATAACAGGAA...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCGACACCCAGAATCATaGCCTGATAAGCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQRHPES*PDKHFP
Trigger: TGGGAAGTGCTTATCAGGCCATGATTCTGGGTGTCG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTCATTGTTGTTAAATTaGGTCTTGAGTTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQSLLLN*VLSFQV
Trigger: CACCTGGAAACTCAAGACCCAATTTAACAACAATGA...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGGGTCTCTCGGAATTTaGCCTTCATGTGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFGSLGI*PSCEPK
Trigger: CTTTGGCTCACATGAAGGCCAAATTCCGAGAGACCC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACGTTTAGCCCAATCTTaGATAGAATATTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQRLAQS*IEYCSA
Trigger: TGCAGAGCAATATTCTATCCAAGATTGGGCTAAACG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGAATTTGAAAGGTCCTaGGGAGCTCGTCGTGAGATT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFEFERS*GARREI
Trigger: AATCTCACGACGAGCTCCCCAGGACCTTTCAAATTC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAATCATGGAAGGAACTaGGCTGACTTGCATGGACCT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFNHGRN*ADLHGP
Trigger: AGGTCCATGCAAGTCAGCCCAGTTCCTTCCATGATT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGGTTTCCCCGGAAACTaGAATCTGGGGAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQGFPGN*NLGKFR
Trigger: TCTGAACTTCCCCAGATTCCAGTTTCCGGGGAAACC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCCCTTTTCCATCTaGATCGGTAAGGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNFPFSI*IGKDAK
Trigger: CTTAGCATCCTTACCGATCCAGATGGAAAAGGGAAA...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR CAA 72 bp CAAATAGGTGTAATCTTCATCCCCAGTGCAGTCATCTaGAATCTGTTCCATCAGGTAATTAGCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: QIGVIFIPSAVI*NLFHQVISNVQ
Trigger: CTGGACATTGCTAATTACCTGATGGAACAGATTCAAGATGACTGCACTGGGGATGAAGATTACACCTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp GTACAAAGCTTTGTTGACACTGTCTGGGAAAAATCCTaGCTTCCCAAAAAGAGCTTCCAATGTTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: VQSFVDTVWEKS*LPKKSFQCWLK
Trigger: TTTGAGCCAACATTGGAAGCTCTTTTTGGGAAGCAAGGATTTTTCCCAGACAGTGTCAACAAAGCTTTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp AGAAGTCCAGTGATAAGCCTGCAATGTTCAGACTGTTaGTGTGGTCAAATTTCATTTCAGCATATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RSPVISLQCSDC*CGQISFQHMSP
Trigger: TGGGCTCATATGCTGAAATGAAATTTGACCACACAAACAGTCTGAACATTGCAGGCTTATCACTGGACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTCTTGACGGTAAAGTaGGTGGAGCAGTTTCCATAC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFVLTVK*VEQFPY
Trigger: GTATGGAAACTGCTCCACTCACTTTACCGTCAAGAC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp AGTTCTTATACTTCCCATTGGTGTCAGATTTTAAAGTCAGCTCGTAGTTCTCATGTCTTGACGGTAAAGTaGGTGGAGCAGTTTCCATAC +
Preference number: 4 (lower is better)
Translates to: SSYTSHWCQILKSARSSHVLTVK*VEQFPY
Trigger: GTATGGAAACTGCTCCACTCACTTTACCGTCAAGAC...ATGAGAACTACGAGCTGACTTTAAAATCTGACACCAATGGGAAGTATAAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCATGACAGTTGGAAGTTaGGATTCTTTCAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALMTVGS*DSFRAS
Trigger: AGAAGCTCTGAAAGAATCTCAACTTCCAACTGTCAT...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTGGCTCCGGGAGCAATaGCTCCAGATGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFWLREQ*LQMKIF
Trigger: AAATATCTTCATCTGGAGTCATTGCTCCCGGAGCCA...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAGAGGCACTTGCAGTTaGTACAACTTGGGAATGGTA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFRGTCS*YNLGMV
Trigger: TACCATTCCCAAGTTGTATCAACTGCAAGTGCCTCT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCAGAAAGCAGGCTaGAGAACCTCAATGACTCGT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQIQKAG*RTSMTR
Trigger: ACGAGTCATTGAGGTTCTTCAGCCTGCTTTCTGGAT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTGCATTGTGTTCCCTaGAGCGGCCATTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLHCVP*SGHLLL
Trigger: TAACAACAAATGGCCGCTTCAGGGAACACAATGCAA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAGCTTAAGTCCTTCTTaGCTGACCTTGAAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNSLSPS*LTLKLK
Trigger: TTTCAACTTCAAGGTCAGTCAAGAAGGACTTAAGCT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCCACCTTCAGATCCCTaGGATATATATCTGGAACGG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFPPSDP*DIYLER
Trigger: CCGTTCCAGATATATATCTCAGGGATCTGAAGGTGG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCTATCCAGGGTAAGCTaGTTGTTTATCTTGACAATC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNLSRVS*LFILTI
Trigger: GATTGTCAAGATAAACAATCAGCTTACCCTGGATAG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGGAGTGTTGGTAGGTTaGGGGCAAATGATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFGVLVG*GQMMKF
Trigger: GAACTTCATCATTTGCCCTCAACCTACCAACACTCC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTGGGACACAGTTAACTaGGATTCAGGCACGGTTATC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQWDTVN*DSGTVI
Trigger: GATAACCGTGCCTGAATCTCAGTTAACTGTGTCCCA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCAGAAAATCAATGAGTaGGTCAATCAGATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNQKINE*VNQMLD
Trigger: GTCAAGCATCTGATTGACTCACTCATTGATTTTCTG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGGAAAACAGTATTTCTaGACCATTATGGACTTTCGA +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQGKQYF*TIMDFR
Trigger: TCGAAAGTCCATAATGGTTCAGAAATACTGTTTTCC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAGTCTGTGTCACTTGTaGTACCATCCCATACTTATT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNSLCHL*YHPILI
Trigger: AATAAGTATGGGATGGTAGCACAAGTGACACAGACT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCAAGTCTGTGTCACTTGTaGTACCATCCCATACTTATT +
Preference number: 4 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPSLCHL*YHPILI
Trigger: AATAAGTATGGGATGGTAGCACAAGTGACACAGACT...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTAAAACAGCTTCGGCCTaGTTTGGAGGTGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFKTASA*FGGDVD
Trigger: ATCCACATCACCTCCAAAGCAGGCCGAAGCTGTTTT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATAGCTCTCTGGATATTTTaGTCAGAGATGGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: EFETSLTWLSTGLSLLKIALWIF*SEMVSF
Trigger: AAAACTAACCATCTCTGAGCAAAATATCCAGAGAGC...TATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCAAGAGAGATGTGACTaGTTCATCACTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFQERCD*FITEAS
Trigger: AGAGGCCTCAGTGATGAAGCAGTCACATCTCTCTTG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp AGAAACAGATTTGTAGAGTTGATAGTTCCGAGAGAATTTTCTGAAGTCCATGACCAAGAGAGATGTGACTaGTTCATCACTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RNRFVELIVPREFSEVHDQERCD*FITEAS
Trigger: AGAGGCCTCAGTGATGAAGCAGTCACATCTCTCTTG...GTCATGGACTTCAGAAAATTCTCTCGGAACTATCAACTCTACAAATCTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp TTTGGTGTGTCTTCAAGTTTCAAAGTCTGTGTCACTTGTGCTACCATCCCATACAATCTTCATCCCCAGTaGAGTCATCTTGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: FGVSSSFKVCVTCATIPYNLHPQ*SHLESV
Trigger: AACAGATTCAAGATGACTGCACTGGGGATGAAGATT...GTATGGGATGGTAGCACAAGTGACACAGACTTTGAAACTTGAAGACACACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAGTTCTGGAGTTAACTaGTCCATGGTTTGGCCCATA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFSSGVN*SMVWPI
Trigger: TATGGGCCAAACCATGGAGCAGTTAACTCCAGAACT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATACAAAGTTCTTCACTTaGTCATTCTGTTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNTKFFT*SFCSHG
Trigger: ACCATGGGAACAGAATGAGCAAGTGAAGAACTTTGT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGCCATTTACCATATCCTaGTCATGTTTATCATCTTTG +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQPFTIS*SCLSSL
Trigger: CAAAGATGATAAACATGAGCAGGATATGGTAAATGG...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCAAACTGACCAGGACTaGCTGTTCTCAATGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQQTDQD*LFSMRG
Trigger: ACCTCTCATTGAGAACAGGCAGTCCTGGTCAGTTTG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTTTCAGAACGCAGCAGTaGATTTTGCTTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFFRTQQ*ILLREG
Trigger: ACCTTCTCTAAGCAAAATGCACTGCTGCGTTCTGAA...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAATTTGCTATACAGCTaGCCAGTATGTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFNLLYS*PVCSPQ
Trigger: CTGGGGAGAACATACTGGGCAGCTGTATAGCAAATT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCTTTCAACAGGAATTTaGTATACAGCTGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNLSTGI*YTAAQY
Trigger: ATACTGGGCAGCTGTATAGCAAATTCCTGTTGAAAG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGGATAGAATATTGCTCTaGAAAGTCAGTAAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VYCLLQGWLTVWFYQYRQDRILL*KVSKVL
Trigger: AAGAACCTTACTGACTTTGCAGAGCAATATTCTATC...CTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATTTTGGAAGTGCCCTaGAGCTTCACTGAAGACCGT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQILEVP*SFTEDR
Trigger: ACGGTCTTCAGTGAAGCTGCAGGGCACTTCCAAAAT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCTGCTGAGGTGGAGATaGCTTTCTTGTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFLLRWR*LSCLSG
Trigger: ACCAGAAAGACAAGAAAGGCATCTCCACCTCAGCAG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCAAAGATATTGGCAATATaGGAAGCCACAAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: DMVVNRLVSTKDTQISRAKILAI*EATKFF
Trigger: GAAGAACTTTGTGGCTTCCCATATTGCCAATATCTT...TGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCCTTGACTGGTCTCTTTaGGGAAGGAATGATAAACTT +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALLDWSL*GRNDKL
Trigger: AAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAG...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTACTGAGCAGCTTGACTaGTCTCTTTGGGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFTEQLD*SLWGRN
Trigger: ATTCCTTCCCCAAAGAGACCAGTCAAGCTGCTCAGT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTCAAAATCCGGAATTTaGACTTCACTGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILSKSGI*TSLDKV
Trigger: GACCTTGTCCAGTGAAGTCCAAATTCCGGATTTTGA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATTTTGGTATCTACATTaGTGCCTGTGTTCCATTCAA +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQFWYLH*CLCSIQ
Trigger: TTGAATGGAACACAGGCACCAATGTAGATACCAAAA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CAGATGAAGATATTTGCAACTGTAATCCAGCTCCAGTGGGGAGTTCAAAGGCATTTTTGGTATCTACATTaGTGCCTGTGTTCCATTCAA +
Preference number: 4 (lower is better)
Translates to: QMKIFATVIQLQWGVQRHFWYLH*CLCSIQ
Trigger: TTGAATGGAACACAGGCACCAATGTAGATACCAAAA...ATGCCTTTGAACTCCCCACTGGAGCTGGATTACAGTTGCAAATATCTTCATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCTCTCGATTAACTCATaGACTTTGGCTCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLSINS*TLALKA
Trigger: TGCCTTCAGAGCCAAAGTCCATGAGTTAATCGAGAG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGATACACTGCAACTGTaGCCTTGGTTTCCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILDTLQL*PWFPLK
Trigger: TTTTAGAGGAAACCAAGGCCACAGTTGCAGTGTATC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCTTCGTTTGCTGAGGTaGTTCCATTCCCTATGTCAG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQLRLLR*FHSLCQ
Trigger: CTGACATAGGGAATGGAACCACCTCAGCAAACGAAG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGAAGTCCATGCTATGTaGCCAGCTTTCAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQEVHAM*PAFNSV
Trigger: GACACTGTTGAAAGCTGGCCACATAGCATGGACTTC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCATGCTGACTGCTTTTaGGAACACATAGCCGAATGC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQHADCF*EHIAEC
Trigger: GCATTCGGCTATGTGTTCCCAAAAGCAGTCAGCATG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAACTTCCATATTTTTCGTaGTTAAGCTCACAGTACTGT +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQLPYFS*LSSQYC
Trigger: ACAGTACTGTGAGCTTAACCACGAAAAATATGGAAG...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAGATATCATCAATTTTaGAAGTGCCCTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNRYHQF*KCPAAS
Trigger: TGAAGCTGCAGGGCACTTCCAAAATTGATGATATCT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCCCTCTAGCTGTAAGTaGTTTTTCGTACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFPSSCK*FFVLCS
Trigger: GGAGCACAGTACGAAAAACCACTTACAGCTAGAGGG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCCTTTTCTTGGTCATTaGAAAGCTCGACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQPFLGH*KARPGS
Trigger: AGAGCCAGGTCGAGCTTTCCAATGACCAAGAAAAGG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGAGGTGTGCCTTTTCTTaGTCATTGGAAAGCTCGACC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQRCAFS*SLESST
Trigger: GGTCGAGCTTTCCAATGACCAAGAAAAGGCACACCT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATGTCAAGTTTGCACGATaGAACCTGAAGATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNVKFAR*NLKICK
Trigger: TTTACAGATCTTCAGGTTCCATCGTGCAAACTTGAC...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCGGTTGAGCTGCATGTaGAATCCAGGACTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFRLSCM*NPGLFQ
Trigger: TTGAAACAGTCCTGGATTCCACATGCAGCTCAACCG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGACTTTCGAATATACCTaGGACAGTACCGTCCCTACC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQTFEYT*DSTVPT
Trigger: GGTAGGGACGGTACTGTCCCAGGTATATTCGAAAGT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTTATTTCCTGAGCAGTaGCAGAAAGCTCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILLFPEQ*QKALQS
Trigger: AGATTGCAGAGCTTTCTGCCACTGCTCAGGAAATAA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTTCTGGATCATCAGTaGTGGCTTTGTACTTTGGAC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFFLDHQ*WLCTLD
Trigger: GTCCAAAGTACAAAGCCATCACTGATGATCCAGAAA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGTTAATATCTGCCTGTaGAGGACTCCTCATCAACAT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFVNICL*RTPHQH
Trigger: ATGTTGATGAGGAGTCCTTCACAGGCAGATATTAAC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCATCACATGATAGTGTaGACGTATTCTTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILHHMIV*TYSCGH
Trigger: ATGACCACAAGAATACGTTCACACTATCATGTGATG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCACCAAAAGGCAAATTTTTGGAGTCCAAATaGACTGAAGCAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: LTVSNIFRSLEDLPPKGKFLESK*TEADIC
Trigger: ACAGATGTCTGCTTCAGTTCATTTGGACTCCAAAAA...TTTGCCTTTTGGTGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGCTGAAGAACCTCAATaGCTCGTAATCAGCCTGATA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQAEEPQ*LVISLI
Trigger: TATCAGGCTGATTACGAGTCATTGAGGTTCTTCAGC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCTTAGTGTCGCCTTGTaGGCACCACTATTAATTTTG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLSVAL*APLLIL
Trigger: CAAAATTAATAGTGGTGCTCACAAGGCGACACTAAG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGACATTGCTTAGCTTCTaGATAGTCTCCTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILTLLSF*IVSFNL
Trigger: CAAGTTGAAGGAGACTATTCAGAAGCTAAGCAATGT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTACTTCAATTGTGTGTaGGATGTGGGGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQYFNCV*DVGKLE
Trigger: TTCCAGCTTCCCCACATCTCACACACAATTGAAGTA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATCTGGGAATCGACTTGTaGTTGAATTTCAAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNLGIDL*LNFKFR
Trigger: TCTAAACTTGAAATTCAATCACAAGTCGATTCCCAG...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCCGACATCTCTATGGTaGATGGAGACACTTCAACAT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQPTSLW*METLQH
Trigger: ATGTTGAAGTGTCTCCATTCACCATAGAGATGTCGG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGATGAAGAAAGGAGATaGGCAACAATATCTGACTGG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFDEERR*ATISDW
Trigger: CCAGTCAGATATTGTTGCTCATCTCCTTTCTTCATC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGACTAGCAATAGTTCCTaGATATTCCCGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILTSNSS*IFPRKN
Trigger: GTTCTTTCTCGGGAATATTCAGGAACTATTGCTAGT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTACACAAAGGCAGTTaGAACACGAAGATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFVHKGS*NTKMLS
Trigger: AGACAGCATCTTCGTGTTTCAACTGCCTTTGTGTAC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCTTCATATTCTGCACTaGAGTCACGGTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQLHILH*SHGVQM
Trigger: CATTTGCACACCGTGACTTCAGTGCAGAATATGAAG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCCCAGTGGTACTTGTTaGCATAATCATAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFPSGTC*HNHKGP
Trigger: GGGTCCTTTATGATTATGTCAACAAGTACCACTGGG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGAATCTTCATCCCCAGTaGAGTCATCTTGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILNLHPQ*SHLESV
Trigger: AACAGATTCAAGATGACTGCACTGGGGATGAAGATT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp GAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACCATTTACCATATCCTaGTCATGTTTATCATCTTTG +
Preference number: 4 (lower is better)
Translates to: EFETSLTWLSTGLSLLKIPFTIS*SCLSSL
Trigger: CAAAGATGATAAACATGAGCAGGATATGGTAAATGG...TATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCTGCTTCGCACCTTCTaGTTGAGTTACAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFLLRTF*LSYKLQ
Trigger: CTGAAGTTTGTAACTCAAGCAGAAGGTGCGAAGCAG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGAAGAGACTCTGAACTaGCCATCAATCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFEETLN*PSILTS
Trigger: AGAAGTCAAGATTGATGGGCAGTTCAGAGTCTCTTC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCTTCAAGTTGGTCGTTaGACTGGTAGATATTCCATC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLQVGR*TGRYSI
Trigger: GATGGAATATCTACCAGTGCAACGACCAACTTGAAG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TCATACTTTAGGGAAGCAGTATTTTTAATGATGCCACTTTGCAGATCAGAGGTGCTTCAAGTTGGTCGTTaGACTGGTAGATATTCCATC +
Preference number: 4 (lower is better)
Translates to: SYFREAVFLMMPLCRSEVLQVGR*TGRYSI
Trigger: GATGGAATATCTACCAGTGCAACGACCAACTTGAAG...CACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCCTAAAGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCCCTTGCTCTACCAATaGTTTCATACGTTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQPLLYQ*FHTFSP
Trigger: TGGGCTAAACGTATGAAAGCATTGGTAGAGCAAGGG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGGGACTCAGAAACAGTaGATAGTTATTCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFGTQKQ*IVIQEV
Trigger: GACTTCCTGAATAACTATGCACTGTTTCTGAGTCCC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp GCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATAAGAGATTAGCTCTCTaGATATTTTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: AYCKAGSLYGFINIGSLNKRLAL*IFCSEM
Trigger: CATCTCTGAGCAAAATATCCAGAGAGCTAATCTCTT...ATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCAAGAGATTAGCTCTCTaGATATTTTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALKRLAL*IFCSEM
Trigger: CATCTCTGAGCAAAATATCCAGAGAGCTAATCTCTT...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp TCTTCCTTTGTGTCACAACTTCTGCTTGAGTTACAAACTTCAGGGTATCCACCAAAGATATTGGCAATATaGGAAGCCACAAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSFVSQLLLELQTSGYPPKILAI*EATKFF
Trigger: GAAGAACTTTGTGGCTTCCCATATTGCCAATATCTT...TGGTGGATACCCTGAAGTTTGTAACTCAAGCAGAAGTTGTGACACAAAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673882.1
CDS-3UTR CCA 90 bp ATATTCGAATCTAGAAATTTGTGGCGTAGAGACCCATCACATGATAGTGTGAACTTTGTTGACACTGTCTaGGAAAAATCCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: IFESRNLWRRDPSHDSVNFVDTV*EKSLLP
Trigger: GGGAAGCAAGGATTTTTCCCAGACAGTGTCAACAAA...GTTCACACTATCATGTGATGGGTCTCTACGCCACAAATTTCTAGATTCGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp AGTTCTTATACTTCCCATTGGTGTCAGATTTTAAAGTCAGCTCGTAGTTCTCATGAATTTGGACTTCACTaGACAAGGTCATACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSYTSHWCQILKSARSSHEFGLH*TRSYSA
Trigger: GGCAGAGTATGACCTTGTCCAGTGAAGTCCAAATTC...ATGAGAACTACGAGCTGACTTTAAAATCTGACACCAATGGGAAGTATAAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp TCATACTTTAGGGAAGCAGTATTTTTAATGATGCCACTTTGCAGATCAGAGGTGTCAAAATCCGGAATTTaGACTTCACTGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: SYFREAVFLMMPLCRSEVSKSGI*TSLDKV
Trigger: GACCTTGTCCAGTGAAGTCCAAATTCCGGATTTTGA...CACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCCTAAAGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATTTAACTCAAGACCATaGGAATTTAGTGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQFNSRP*EFSDPE
Trigger: TTCTGGATCACTAAATTCCCATGGTCTTGAGTTAAA...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTAGATATTCCATCTTaGCCAATCCTTAGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFVDIPS*PILSVA
Trigger: GGCGACACTAAGGATTGGCCAAGATGGAATATCTAC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGACAATTGTAAATTCTTaGGGCTTCTCAACGGCATCT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILTIVNS*GFSTAS
Trigger: AGATGCCGTTGAGAAGCCCCAAGAATTTACAATTGT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTTTCCAGCTAGGTGCTaGATGTCTATATTCTGTATG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILFPARC*MSIFCM
Trigger: CATACAGAATATAGACATCCAGCACCTAGCTGGAAA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGAAAACCTGGATTTGTTaGTCTACTTCATACCTCTCG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILKTWIC*STSYLS
Trigger: CGAGAGGTATGAAGTAGACCAACAAATCCAGGTTTT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTTCTCAGGTACTTGCTaGAGAACTTCACTGACTCCT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFFSGTC*RTSLTP
Trigger: AGGAGTCAGTGAAGTTCTCCAGCAAGTACCTGAGAA...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCTCAAAATTGGAATTTaGGCTTTTGTGGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILLKIGI*AFVVVA
Trigger: GGCAACAACCACAAAAGCCCAAATTCCAATTTTGAG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGTCTCCTACCAATGCTaGTGGTTACATCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQVSYQC*WLHPAL
Trigger: TAAAGCTGGATGTAACCACCAGCATTGGTAGGAGAC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGATAGTAAGTTCTCCTaGAGCAAGCTTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFDSKFS*SKLHVG
Trigger: CCCTACATGAAGCTTGCTCCAGGAGAACTTACTATC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTGCCTACTGCAAGGCTaGCTCACTGTATGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFCLLQG*LTVWFY
Trigger: ATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCA...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
3UTR CAA 72 bp CTTTGGTGTGTCTTCAAGTTTCAAAGTCTGTGTCACTaGTGCTACCATCCCATACTTATTCTTGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LWCVFKFQSLCH*CYHPILILVGE
Trigger: TTCTCCTACAAGAATAAGTATGGGATGGTAGCACAAGTGACACAGACTTTGAAACTTGAAGACACACCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp TGCTCATTCTGTTCCCATGGTAGAATTTGGACAATTTaGTTAATATCTGCCTGTGAAGGACTCCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: CSFCSHGRIWTI*LISACEGLLIN
Trigger: GTTGATGAGGAGTCCTTCACAGGCAGATATTAACAAAATTGTCCAAATTCTACCATGGGAACAGAATGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
3UTR CAA 72 bp GTAATCAGCCTGATATTCAGAACGCAGCAGTGCATTTaGCTTAGAGAAGGTCATATCCATCTTGTTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VISLIFRTQQCI*LREGHIHLVRS
Trigger: ACTTCTAACAAGATGGATATGACCTTCTCTAAGCAAAATGCACTGCTGCGTTCTGAATATCAGGCTGATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGACACCATCAGGAACTTaGCCATTAACCCAGTACAAA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQTPSGT*PLTQYK
Trigger: TTTGTACTGGGTTAATGGTCAAGTTCCTGATGGTGT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTAATTTTCTTGTTCTaGATGTCCAGGGTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFVIFLF*MSRVSL
Trigger: CAGACTCACCCTGGACATTCAGAACAAGAAAATTAC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTCAGTGGAGGAGTTGTaGTTATTGTGTAAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQSVEEL*LLCKVD
Trigger: GTCTACCTTACACAATAATCACAACTCCTCCACTGA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTTTCCTTCCCATTCCTaGAGTCCTTCATATTTGCCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQFPSHS*SPSYLP
Trigger: TGGCAAATATGAAGGACTTCAGGAATGGGAAGGAAA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGAGTTCAGAAAATCAATaGGTGAGTCAATCAGATGCT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILSSENQ*VSQSDA
Trigger: AGCATCTGATTGACTCACTCATTGATTTTCTGAACT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTGGTCTTGAGAGACTaGATGGCTTTAAATACCTCT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFVVLRD*MALNTS
Trigger: AGAGGTATTTAAAGCCATTCAGTCTCTCAAGACCAC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TCATACTTTAGGGAAGCAGTATTTTTAATGATGCCACTTTGCAGATCAGAGGTGAGTCTGTGTCACTTGTaGTACCATCCCATACTTATT +
Preference number: 4 (lower is better)
Translates to: SYFREAVFLMMPLCRSEVSLCHL*YHPILI
Trigger: AATAAGTATGGGATGGTAGCACAAGTGACACAGACT...CACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCCTAAAGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGACCAGTTGTACAAGTTaGTGTAGACATTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQTSCTS*CRHSWR
Trigger: TCTCCACGAATGTCTACAGCAACTTGTACAACTGGT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTTCAGAACGCAGCAGTaGATTTTGCTTAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQFRTQQ*ILLREG
Trigger: ACCTTCTCTAAGCAAAATGCACTGCTGCGTTCTGAA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCTGAATTATAGTTTGTaGTCATGTCAATGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILLNYSL*SCQWLK
Trigger: CTTCAGCCATTGACATGAGCACAAACTATAATTCAG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGATTGCCATTTGTATGTaGATCGATGGTCATGGTAAA +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILIAICM*IDGHGK
Trigger: TTTACCATGACCATCGATGCACATACAAATGGCAAT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAAATGCCAGAGGTTCTaGTTTCAACAGGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFKCQRF*FQQEFA
Trigger: AGCAAATTCCTGTTGAAAGCAGAACCTCTGGCATTT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTCTTGGATAGAATATTaGTCTGCAAAGTCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILSWIEY*SAKSVR
Trigger: CCTTACTGACTTTGCAGAGCAATATTCTATCCAAGA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTTCATTGTTTGTGGATaGCGTGATCTCAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQFIVCG*RDLKWL
Trigger: CAGCCATTTGAGATCACGGCATCCACAAACAATGAA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTGGTTTTTCGTACTGTaGTCCCAGAGGGAATATATG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQWFFVL*SQREYM
Trigger: CATATATTCCCTCTGGGAGCACAGTACGAAAAACCA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTACTGAAGTCACGGTGTaGAAATGTTCCTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFTEVTV*KCSFSL
Trigger: AAGACTAAAGGAACATTTGCACACCGTGACTTCAGT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGCGGCTGTTGATCTTTaGTGTGTCTTCAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFAAVDL*CVFKFQ
Trigger: TTGAAACTTGAAGACACACCAAAGATCAACAGCCGC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGAGTTAACTGCTCCATaGTTTGGCCCATATTTCCAA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQELTAP*FGPYFQ
Trigger: TTGGAAATATGGGCCAAACCATGGAGCAGTTAACTC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGAAACAGATTTGTAGAGTTGATAGTTCCGAGAGAATTTTCTGAAGTCCATGACGAGTTAACTGCTCCATaGTTTGGCCCATATTTCCAA +
Preference number: 4 (lower is better)
Translates to: RNRFVELIVPREFSEVHDELTAP*FGPYFQ
Trigger: TTGGAAATATGGGCCAAACCATGGAGCAGTTAACTC...GTCATGGACTTCAGAAAATTCTCTCGGAACTATCAACTCTACAAATCTGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CTGTTCTTGTTCAAGGTATATTTGACCCGGCCATCGCTTTTTAAGAAGAGGTTTCATGTTTATCATCTTTaGTATAGCCAAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFLFKVYLTRPSLFKKRFHVYHL*YSQSGP
Trigger: TGGACCACTTTGGCTATACCAAAGATGATAAACATG...AAACCTCTTCTTAAAAAGCGATGGCCGGGTCAAATATACCTTGAACAAGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCTTTAACTCAAGACCATaGGAATTTAGTGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALFNSRP*EFSDPE
Trigger: TTCTGGATCACTAAATTCCCATGGTCTTGAGTTAAA...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp AGTAATTTTCTTGTTCTGAATGTCCAGGGTGAGTCTGTAAGACGTTTTGCCCTCTTCAGACTGTTTGTGTaGTCAAATTTCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SNFLVLNVQGESVRRFALFRLFV*SNFISA
Trigger: TGCTGAAATGAAATTTGACCACACAAACAGTCTGAA...GAGGGCAAAACGTCTTACAGACTCACCCTGGACATTCAGAACAAGAAAATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCTGCAACTGTGGCCTTaGTTTCCTCTAAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQLQLWP*FPLKTV
Trigger: AACTGTTTTTAGAGGAAACCAAGGCCACAGTTGCAG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCCATTTATTCCTACATaGGCCTCCATAATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFPFIPT*ASIMFS
Trigger: CGAGAACATTATGGAGGCCCATGTAGGAATAAATGG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGTTCTTGTCAATCTTGTaGTGCCCTCTAATTTGTACT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILFLSIL*CPLICT
Trigger: AGTACAAATTAGAGGGCACCACAAGATTGACAAGAA...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGAAGACCGTGTGCTCTTaGAATTCAAGTAAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQKTVCS*NSSKCW
Trigger: CCAACACTTACTTGAATTCCAAGAGCACACGGTCTT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCTGAAGATCTGTAAATaGGACATGGAACGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFLKICK*DMERRH
Trigger: ATGCCTACGTTCCATGTCCCATTTACAGATCTTCAG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCCAGCCAACTATACTTaGATCAAAATATTCTTCACG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILPANYT*IKIFFT
Trigger: CGTGAAGAATATTTTGATCCAAGTATAGTTGGCTGG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGGGAGGTTAATGGAGTaGACATCTTGGTTTTTATCA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFGRLME*TSWFLS
Trigger: TGATAAAAACCAAGATGTTCACTCCATTAACCTCCC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTAGGTGTTTGCTATTaGTCTTATTGGACAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFLGVCY*SYWTVQ
Trigger: TTGGACTGTCCAATAAGATCAATAGCAAACACCTAA...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTGGTACACAATTCCTTaGAATCTGGAAGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQWYTIP*NLEEKA
Trigger: AGCTTTCTCTTCCAGATTTCAAGGAATTGTGTACCA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTTCATATGGAATTCTTaGGTAACTCGTACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQFIWNS*VTRTKP
Trigger: TGGCTTGGTACGAGTTACTCAAGAATTCCATATGAA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCTTTTAATTATTTCCTaGGCAGTGGCAGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQLLIIS*AVAESS
Trigger: AGAGCTTTCTGCCACTGCTCAGGAAATAATTAAAAG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTGACAAGGTCATACTCTaGCGATTATATTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFDKVIL*RLYLNV
Trigger: GACATTCAAATATAATCGGCAGAGTATGACCTTGTC...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTGTCTCTTAAGCTGCTaGAGTTTTTCTTGTATCTGG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFCLLSC*SFSCIW
Trigger: CCAGATACAAGAAAAACTGCAGCAGCTTAAGAGACA...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTATGTGTCTCTTAAGCTaGTGCAGTTTTTCTTGTATC +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFMCLLS*CSFSCI
Trigger: GATACAAGAAAAACTGCAGCAGCTTAAGAGACACAT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCCCTCTAATTTGTACTaGAGTGCATCAATGACAGAT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFPSNLY*SASMTD
Trigger: ATCTGTCATTGATGCACTGCAGTACAAATTAGAGGG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGCTTGACTGGTCTCTTTaGGGAAGGAATGATAAACTT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQLDWSL*GRNDKL
Trigger: AAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAG...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp AGAAACAGATTTGTAGAGTTGATAGTTCCGAGAGAATTTTCTGAAGTCCATGACCTTGACTGGTCTCTTTaGGGAAGGAATGATAAACTT +
Preference number: 4 (lower is better)
Translates to: RNRFVELIVPREFSEVHDLDWSL*GRNDKL
Trigger: AAGTTTATCATTCCTTCCCCAAAGAGACCAGTCAAG...GTCATGGACTTCAGAAAATTCTCTCGGAACTATCAACTCTACAAATCTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp CAAAGGAATCTCAATTTTCAAACTGTTCTTGTTCAAGGTATATTTGACCCGGCCTTTTGGTATCTACATTaGTGCCTGTGTTCCATTCAA +
Preference number: 4 (lower is better)
Translates to: QRNLNFQTVLVQGIFDPAFWYLH*CLCSIQ
Trigger: TTGAATGGAACACAGGCACCAATGTAGATACCAAAA...GGCCGGGTCAAATATACCTTGAACAAGAACAGTTTGAAAATTGAGATTCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CCA 90 bp TCATACTTTAGGGAAGCAGTATTTTTAATGATGCCACTTTGCAGATCAGAGGTGGTGAACGTATTCTTGTaGTCATATGTTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SYFREAVFLMMPLCRSEVVNVFL*SYVVSP
Trigger: TGGAGAAACAACATATGACCACAAGAATACGTTCAC...CACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCCTAAAGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGCTGGTGTGGAAAACCTaGATGGGATTTTTATATTTT +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILLVWKT*MGFLYF
Trigger: AAAATATAAAAATCCCATCCAGGTTTTCCACACCAG...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGGCAACAATATCTGACTaGTTAAAAAGTTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILATISD*LKSSAL
Trigger: CAATGCTGAACTTTTTAACCAGTCAGATATTGTTGC...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTATATGCGTTGGAGTGTaGCTTCTCCAGCAAAATTTT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFICVGV*LLQQNF
Trigger: AAAATTTTGCTGGAGAAGCCACACTCCAACGCATAT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAGAATGAATAGCCATTaGGGTTTTTGGTGTACACAA +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFRMNSH*GFWCTQ
Trigger: TTGTGTACACCAAAAACCCCAATGGCTATTCATTCT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTAAACTTTTACAGGGATaGAGAATGAATAGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFKLLQG*RMNSHW
Trigger: CCAATGGCTATTCATTCTCCATCCCTGTAAAAGTTT...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATCCTGATTTCTGAACCATTATaGACTTTCGAATATACCTGG +
Preference number: 4 (lower is better)
Translates to: TPFICSSSPKFSKITQILISEPL*TFEYTW
Trigger: CCAGGTATATTCGAAAGTCCATAATGGTTCAGAAAT...CAGGATCTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTTAGTATCCACATTTTaGATCCAGGATGCAGTACTA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQLVSTF*IQDAVL
Trigger: TAGTACTGCATCCTGGATTCAAAATGTGGATACTAA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTGGTTGTACTTATACTaGTTGAACCTAGCACTTACT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQWLYLY*LNLALT
Trigger: AGTAAGTGCTAGGTTCAATCAGTATAAGTACAACCA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR TCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTAGAGACAGTAGGTTTTaGCTTGGTATTTCCATTAAG +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFRDSRF*LGISIK
Trigger: CTTAATGGAAATACCAAGTCAAAACCTACTGTCTCT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGCTCTCTGGATATTTTaGTCAGAGATGGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFALWIF*SEMVSF
Trigger: AAAACTAACCATCTCTGAGCAAAATATCCAGAGAGC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTATGAGAGAAAGTAAATaGCAGAGGTTCTGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFMRESK*QRFCFQ
Trigger: TTGAAAGCAGAACCTCTGGCATTTACTTTCTCTCAT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGGATGGCTTTGTACTTTaGACACATTTCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQDGFVL*THFRIE
Trigger: TTCAATCCTGAAATGTGTCCAAAGTACAAAGCCATC...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTCATGTTTATCATCTTTaGTATAGCCAAAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFHVYHL*YSQSGP
Trigger: TGGACCACTTTGGCTATACCAAAGATGATAAACATG...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGTGAACGTATTCTTGTaGTCATATGTTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFVNVFL*SYVVSP
Trigger: TGGAGAAACAACATATGACCACAAGAATACGTTCAC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTAGGCAGCAGAAGAGATaGCATAGATGTGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFRQQKR*HRCVLF
Trigger: AAATAAAACACATCTATGCCATCTCTTCTGCTGCCT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp CTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTCAATTCCTTGAAATCTaGAAGAGAAAGCTTGAGATT +
Preference number: 4 (lower is better)
Translates to: LLQGWLTVWFYQYRQFEFQFLEI*KRKLEI
Trigger: AATCTCAAGCTTTCTCTTCCAGATTTCAAGGAATTG...AAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTTCCATCTGATCTTCTaGTTCTTAGTGTTAGCATTC +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQFHLIF*FLVLAF
Trigger: GAATGCTAACACTAAGAACCAGAAGATCAGATGGAA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGATTTTGAATCCAGGATaGAGTACTACTTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQILNPG*STTSTF
Trigger: AAAAGTGGAAGTAGTACTGCATCCTGGATTCAAAAT...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR GCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTAGTGAGTCAATCAGATaGTTGACTTTCATATGGAAT +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFSESIR*LTFIWN
Trigger: ATTCCATATGAAAGTCAAGCATCTGATTGACTCACT...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp ATAAAGACTCCATTTATTTGTTCCTCCTCCCCCAAGTTTAGCAAAATAACTCAGTTCAGACTGTTTGTGTaGTCAAATTTCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: IKTPFICSSSPKFSKITQFRLFV*SNFISA
Trigger: TGCTGAAATGAAATTTGACCACACAAACAGTCTGAA...CTGAGTTATTTTGCTAAACTTGGGGGAGGAGGAACAAATAAATGGAGTCTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTTTCAACTTGTATTGGTaGGCCAACTCTACTAATTTA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFFNLYW*ANSTNL
Trigger: TAAATTAGTAGAGTTGGCCCACCAATACAAGTTGAA...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CCA 90 bp TACTGCAAGGCTGGCTCACTGTATGGTTTTATCAATATAGGCAGTTTGAATTTTGGGATGTTCAATTTGTaGAAGTATTTAGTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: YCKAGSLYGFINIGSLNFGMFNL*KYLVLL
Trigger: TAGCAACACTAAATACTTCCACAAATTGAACATCCC...AAAATTCAAACTGCCTATATTGATAAAACCATACAGTGAGCCAGCCTTGCAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS CCA 90 bp CGGGTCCATCGCCAGCTGCGGTGGGGCGGCTCCTGGGCTGCGGCCTaGCCTCGGCCTCGCGGCCCTGGCTGGCTGGGCGGGCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RVHRQLRWGGSWAAA*PRPRGPGWLGGLLS
Trigger: GCTGAGGAGCCCGCCCAGCCAGCCAGGGCCGCGAGGCCGAGGCCAGGCCGCAGCCCAGGAGCCGCCCCACCGCAGCTGGCGATGGACCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS CCA 90 bp GTGGGGCGGCTCCTGGGCTGCGGCCTGGCCTCGGCCTCGCGGCCCTaGCTGGCTGGGCGGGCTCCTCAGCGGCAGCAACCGAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: VGRLLGCGLASASRP*LAGRAPQRQQPRRA
Trigger: TGCCCTTCTCGGTTGCTGCCGCTGAGGAGCCCGCCCAGCCAGCCAGGGCCGCGAGGCCGAGGCCAGGCCGCAGCCCAGGAGCCGCCCCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS CCA 90 bp GCTCCTGGGCTGCGGCCTGGCCTCGGCCTCGCGGCCCTGGCTGGCTaGGCGGGCTCCTCAGCGGCAGCAACCGAGAAGGGCACTCAGCCC +
Preference number: 5 (lower is better)
Translates to: APGLRPGLGLAALAG*AGSSAAATEKGTQP
Trigger: GGGCTGAGTGCCCTTCTCGGTTGCTGCCGCTGAGGAGCCCGCCCAGCCAGCCAGGGCCGCGAGGCCGAGGCCAGGCCGCAGCCCAGGAGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS CCA 90 bp GGCGGCTCCTGGGCTGCGGCCTGGCCTCGGCCTCGCGGCCCTGGCTaGCTGGGCGGGCTCCTCAGCGGCAGCAACCGAGAAGGGCACTCA +
Preference number: 5 (lower is better)
Translates to: GGSWAAAWPRPRGPG*LGGLLSGSNREGHS
Trigger: TGAGTGCCCTTCTCGGTTGCTGCCGCTGAGGAGCCCGCCCAGCCAGCCAGGGCCGCGAGGCCGAGGCCAGGCCGCAGCCCAGGAGCCGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CAA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGGGGCGGGTCATGCCTTaGATGAGAGCAAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQEGRVMP*MRASGL
Trigger: CAGCCCACTTGCTCTCATCAAAGGCATGACCCGCCC...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGATTTGGAGAAGCAGTTaGGCAGGCGACCAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRIWRSS*AGDQWA
Trigger: CGCCCACTGGTCGCCTGCCAAACTGCTTCTCCAAAT...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGACCTCCAGCTCAACCTaGCAGTTGATCCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRTSSST*QLILVA
Trigger: TGCCACCAGGATCAACTGCAAGGTTGAGCTGGAGGT...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGTTCTTCAGCAAGGCTTaGCCCTCAGGGTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRFFSKA*PSGLKP
Trigger: TGGCTTCAACCCTGAGGGCAAAGCCTTGCTGAAGAA...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGTACTTCCGGAGGTGCTaGAATCGGGTCGCATCTTTT +
Preference number: 5 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRYFRRC*NRVASF
Trigger: AAAAGATGCGACCCGATTCAAGCACCTCCGGAAGTA...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGCCCAGTGCAGTCATCTaGAATCTGTTCCATCAGGTA +
Preference number: 5 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQEPSAVI*NLFHQV
Trigger: TACCTGATGGAACAGATTCAAGATGACTGCACTGGG...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGACTTCTGGCTTCTGCTaGCAAACGGGGTATGGAAAT +
Preference number: 5 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQETSGFC*QTGYGN
Trigger: ATTTCCATACCCCGTTTGCAAGCAGAAGCCAGAAGT...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCATTTGGAGAAGCAGTTaGGCAGGCGACCAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSIWRSS*AGDQWA
Trigger: CGCCCACTGGTCGCCTGCCAAACTGCTTCTCCAAAT...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS TCA 90 bp TTCATCCATATCCATGCCCACGGTGCCTACGGCTGGGGAGGCTGCTaGGGTGGAGATGCCTTTCTTGTCTTTCTGGTAGCGCAGATGGAG +
Preference number: 5 (lower is better)
Translates to: FIHIHAHGAYGWGGC*GGDAFLVFLVAQME
Trigger: CTCCATCTGCGCTACCAGAAAGACAAGAAAGGCATCTCCACCTCAGCAGCCTCCCCAGCCGTAGGCACCGTGGGCATGGATATGGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CAA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGGCTTTGCCCTCAGGGTaGAAGCCATACACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLALPSG*KPYTSF
Trigger: GAAAGAGGTGTATGGCTTCAACCCTGAGGGCAAAGC...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp CATCTGGACCCCACTCCTAGCGAAGTCCGGAATGATGATGCCCATATTTGTCACCCTGTGCGGATGGGCTaGAAGCGATCACACTGCCCC +
Preference number: 5 (lower is better)
Translates to: HLDPTPSEVRNDDAHICHPVRMG*KRSHCP
Trigger: GGGGCAGTGTGATCGCTTCAAGCCCATCCGCACAGG...GTGACAAATATGGGCATCATCATTCCGGACTTCGCTAGGAGTGGGGTCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CTGGGGGATCCCCTGCAGAGTGCGGGCACCCATCAGAAGCAGCTTTCCCAGGAGCAAAGTCTGTGTCACTaGTGCTACCATCCCATACTT +
Preference number: 5 (lower is better)
Translates to: LGDPLQSAGTHQKQLSQEQSLCH*CYHPIL
Trigger: AAGTATGGGATGGTAGCACAAGTGACACAGACTTTG...CTCCTGGGAAAGCTGCTTCTGATGGGTGCCCGCACTCTGCAGGGGATCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp GCGGATAGTAGGAGGCGGAGTCTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGGAAAGTCATGTCTGTTaGAGGGACTCTGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: ADSRRRSLWSWRWSKRLRESHVC*RDSVIQ
Trigger: CTGGATCACAGAGTCCCTCAAACAGACATGACTTTC...CCTCAGGCGCTTACTCCAACGCCAGCTCCACAGACTCCGCCTCCTACTATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTaGAACCCGGAAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLRQENC*NPEGRV
Trigger: AACTCTGCCTTCCGGGTTCAAGCAATTCTCCTGCCT...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS GCA 90 bp GCAAGTGGGCTGATGCCTGTGCGGATGGGCTTGAAGCGATCACACTaGCCCAGGTCTCTTTCAGTGGATATTTCTGTTGCCACATTGCCC +
Preference number: 5 (lower is better)
Translates to: ASGLMPVRMGLKRSH*PRSLSVDISVATLP
Trigger: GGGCAATGTGGCAACAGAAATATCCACTGAAAGAGACCTGGGGCAGTGTGATCGCTTCAAGCCCATCCGCACAGGCATCAGCCCACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233242.5
ENST00000399256.4
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGCTTTGCCCTCAGGGTaGAAGCCATACACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RSSLAGDQWARISLLASAALPSG*KPYTSF
Trigger: GAAAGAGGTGTATGGCTTCAACCCTGAGGGCAAAGC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGAAGAGGTGTTGCTCCTaGCAGATGGCTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLKRCCS*QMASAT
Trigger: TGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCTT...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTGGAGGTGATGTGGATTaGGTGCTCTCAAATGCGAGG +
Preference number: 5 (lower is better)
Translates to: RSSLAGDQWARISLLASAGGDVD*VLSNAR
Trigger: CCTCGCATTTGAGAGCACCAAATCCACATCACCTCC...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACTGAGGCTGTCCACACTGTCTATCAGAAGGGGGTaGGCATGCACACGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: HTFQPLEDVSGALRLSTLSIRRG*ACTRFS
Trigger: GCTGAAACGTGTGCATGCCAACCCCCTTCTGATAGA...CAGTGTGGACAGCCTCAGTGCTCCACTCACATCCTCCAGTGGCTGAAACGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS TCA 90 bp GGGAACCTCCAGCTCAACCTTGCAGTTGATCCTGGTGGCACTTCTTaGATCAGCAGTCCCAGGGACTCCACTGGAACTCTCAGCCTCATA +
Preference number: 5 (lower is better)
Translates to: GNLQLNLAVDPGGTS*ISSPRDSTGTLSLI
Trigger: TATGAGGCTGAGAGTTCCAGTGGAGTCCCTGGGACTGCTGATTCAAGAAGTGCCACCAGGATCAACTGCAAGGTTGAGCTGGAGGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233242.5
ENST00000399256.4
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTAGCTCAACCTTGCAGTaGATCCTGGTGGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: RSSLAGDQWARISLLASASSTLQ*ILVALL
Trigger: AAGAAGTGCCACCAGGATCAACTGCAAGGTTGAGCT...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CTCCTGGTCCTTGTCTTTAGGCTCCATTTTCCGCAGAGCCTGGATGGCAGCTTTCAGCTTCGGCCTGCTTaGGAGGTGATGTGGATTTGG +
Preference number: 5 (lower is better)
Translates to: LLVLVFRLHFPQSLDGSFQLRPA*EVMWIW
Trigger: CCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTG...AAAGCTGCCATCCAGGCTCTGCGGAAAATGGAGCCTAAAGACAAGGACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGCAGCTTCGGCCTGCTTaGGAGGTGATGTGGATTTGG +
Preference number: 5 (lower is better)
Translates to: GLDTSISCGKRDVTASSLQLRPA*EVMWIW
Trigger: CCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTG...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CTGTGGAGCTGGCGTTGGAGTAAGCGCCTGAGGTGCAGTAATTCAGGCCAGGAAGGGATCACCTCCGTTTaGGTGGTAGAGACCAAATGT +
Preference number: 5 (lower is better)
Translates to: LWSWRWSKRLRCSNSGQEGITSV*VVETKC
Trigger: ACATTTGGTCTCTACCACCAAAACGGAGGTGATCCC...TTCCTGGCCTGAATTACTGCACCTCAGGCGCTTACTCCAACGCCAGCTCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCGGTAAAAGTAGGGACTaGGAACTCTCGAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSGKSRD*ELSRWQ
Trigger: CTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTACC...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS GCA 90 bp GGCCTTGTCCTTCCACTCTTGGTAGGTCCCAGTGGTGCCACTGGCTaGTTTCTGGAACCTCACGTCGATATCATCAATTTGCCTAATGGC +
Preference number: 5 (lower is better)
Translates to: GLVLPLLVGPSGATG*FLEPHVDIINLPNG
Trigger: GCCATTAGGCAAATTGATGATATCGACGTGAGGTTCCAGAAAGCAGCCAGTGGCACCACTGGGACCTACCAAGAGTGGAAGGACAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS CCA 90 bp TCAGGGCCACTTCCTGGCCAAGGTCAGGGAAATCATGGAAGGAACTaGGCTGACTTGCATGGACCTGAACAAGAGCTGACATTTGCCATG +
Preference number: 5 (lower is better)
Translates to: SGPLPGQGQGNHGRN*ADLHGPEQELTFAM
Trigger: CATGGCAAATGTCAGCTCTTGTTCAGGTCCATGCAAGTCAGCCCAGTTCCTTCCATGATTTCCCTGACCTTGGCCAGGAAGTGGCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS CCA 90 bp GGTACAGATTCTGGGCCTTGTCCTTCCACTCTTGGTAGGTCCCAGTaGTGCCACTGGCTGCTTTCTGGAACCTCACGTCGATATCATCAA +
Preference number: 5 (lower is better)
Translates to: GTDSGPCPSTLGRSQ*CHWLLSGTSRRYHQ
Trigger: TTGATGATATCGACGTGAGGTTCCAGAAAGCAGCCAGTGGCACCACTGGGACCTACCAAGAGTGGAAGGACAAGGCCCAGAATCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CAA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGTTCTTCAGCAAGGCTTaGCCCTCAGGGTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GLDTSISCGKRDVTASSLFFSKA*PSGLKP
Trigger: TGGCTTCAACCCTGAGGGCAAAGCCTTGCTGAAGAA...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp TGTGGATTTGGTGCTCTCAAATGCGAGGCCCATCTTCTTAGTACCTTCACCAAACCTGTGCGGATGGGCTaGAAGCGATCACACTGCCCC +
Preference number: 5 (lower is better)
Translates to: CGFGALKCEAHLLSTFTKPVRMG*KRSHCP
Trigger: GGGGCAGTGTGATCGCTTCAAGCCCATCCGCACAGG...TTTGGTGAAGGTACTAAGAAGATGGGCCTCGCATTTGAGAGCACCAAATCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGTCTATCAGAAGGGGGTaGGCATGCACACGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: GLDTSISCGKRDVTASSLSIRRG*ACTRFS
Trigger: GCTGAAACGTGTGCATGCCAACCCCCTTCTGATAGA...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp TTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAGGTCATCAGTGATGGCTTaGTACTTTGGACACATTTCA +
Preference number: 5 (lower is better)
Translates to: LAGHAGARPQSQLLGRLRSSVMA*YFGHIS
Trigger: TGAAATGTGTCCAAAGTACAAAGCCATCACTGATGA...CCTCAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACCAAATGTAATGTGTaGCCTCCACTGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSTKCNV*PPLSSL
Trigger: CAAGCTGCTCAGTGGAGGCAACACATTACATTTGGT...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp TGTAGACATTCGTGGAGAGGTCTAGAACACCCAGGAGAGGCACTTGCAGTTGATTCCTGGTGGCACTTCTaGAATCAGCAGTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: CRHSWRGLEHPGEALAVDSWWHF*NQQSQG
Trigger: TCCCTGGGACTGCTGATTCAAGAAGTGCCACCAGGA...ATCAACTGCAAGTGCCTCTCCTGGGTGTTCTAGACCTCTCCACGAATGTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CAA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTAACTCCTCAGAGTTCTaGGTTTTCTTCAGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: RSSLAGDQWARISLLASANSSEF*VFFSKA
Trigger: AGCCTTGCTGAAGAAAACCAAGAACTCTGAGGAGTT...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATACACAAATTAGCCGGGCCTGTGCGGATGGGCTaGAAGCGATCACACTGCCCC +
Preference number: 5 (lower is better)
Translates to: LTWLSTGLSLLKIHKLAGPVRMG*KRSHCP
Trigger: GGGGCAGTGTGATCGCTTCAAGCCCATCCGCACAGG...CCCGGCTAATTTGTGTATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp AGGGCTGGTGTCCTAACAGTCTCTAACATCTTTAGATCTCTGGAGGATTTGCCAGGGCGGGTCATGCCTTaGATGAGAGCAAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RAGVLTVSNIFRSLEDLPGRVMP*MRASGL
Trigger: CAGCCCACTTGCTCTCATCAAAGGCATGACCCGCCC...TGGCAAATCCTCCAGAGATCTAAAGATGTTAGAGACTGTTAGGACACCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCAAGAGGTGTTGCTCCTaGCAGATGGCTTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: HLRSGVRNQPDMVVNRLVKRCCS*QMASAT
Trigger: TGTGGCAGAAGCCATCTGCAAGGAGCAACACCTCTT...GACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCTCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGAAAGAGCTTCCAATGTaGGCTCAAAGCCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLKELPM*AQSLFL
Trigger: AAGGAAAAGGCTTTGAGCCAACATTGGAAGCTCTTT...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCACCCAGTACAAAGCTTaGTTGACACTGTCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSTQYKA*LTLSGK
Trigger: TTTCCCAGACAGTGTCAACAAAGCTTTGTACTGGGT...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CCCGACTCGTGGAAGAAGTTGGTGTTCATCTGGACCCCACTCCTAGCGAAGTCCAGTTCAGCCTGCATGTaGGCTACTTCCAGTTTTACT +
Preference number: 5 (lower is better)
Translates to: PDSWKKLVFIWTPLLAKSSSACM*ATSSFT
Trigger: AGTAAAACTGGAAGTAGCCAACATGCAGGCTGAACT...GGACTTCGCTAGGAGTGGGGTCCAGATGAACACCAACTTCTTCCACGAGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp AGTTACAAACTTCAGGGTATCCACCAAGGCTCTGTCCTCTCTCTGGAGCTCATACAGACACGGAGGGTTTaGCCACCAGTTCAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SYKLQGIHQGSVLSLELIQTRRV*PPVQPA
Trigger: TGCAGGCTGAACTGGTGGCAAAACCCTCCGTGTCTG...TATGAGCTCCAGAGAGAGGACAGAGCCTTGGTGGATACCCTGAAGTTTGTAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp TCTCTGGAGCTCATAGGTTGCGCTGACAGAATACTGCTCAATCTCTCCTGTAGGCCTCCACTGAGCAGCTaGACTGGTCTCTTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: SLELIGCADRILLNLSCRPPLSS*TGLFGE
Trigger: TTCCCCAAAGAGACCAGTCAAGCTGCTCAGTGGAGG...CCTACAGGAGAGATTGAGCAGTATTCTGTCAGCGCAACCTATGAGCTCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGGGTAAAAGTAGGGACTaGGAACTCTCGAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: GLDTSISCGKRDVTASSLGKSRD*ELSRWQ
Trigger: CTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTACC...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp CTGCCTGTTCTCAATGAGAGGTGGGATCACCTCCGTTTTGGTGGTAGAGACCAAGAGTTAAACCTCAGGTaGGACTCTCCATTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LPVLNERWDHLRFGGRDQELNLR*DSPLSR
Trigger: CCGGCTCAATGGAGAGTCCAACCTGAGGTTTAACTC...TTGGTCTCTACCACCAAAACGGAGGTGATCCCACCTCTCATTGAGAACAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CAA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTTTAATGATGCCACTTaGCAGATCAGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSFNDAT*QIRGGG
Trigger: ACCTCCACCTCTGATCTGCAAAGTGGCATCATTAAA...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS TCA 90 bp TCAAACACGTTATCCTTGAGTCCCTGGAAACTGGCTTGGCCTTCCTaGGTCAACAGTTCCTGGTACAGATTCTGGGCCTTGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: SNTLSLSPWKLAWPS*VNSSWYRFWALSFH
Trigger: GTGGAAGGACAAGGCCCAGAATCTGTACCAGGAACTGTTGACTCAGGAAGGCCAAGCCAGTTTCCAGGGACTCAAGGATAACGTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS GCA 90 bp GAAGCGATCACACTGCCCCAGGTCTCTTTCAGTGGATATTTCTGTTaGCACATTGCCCTTCCTCGTCTTGACGGTAAAGTGAGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: EAITLPQVSFSGYFC*HIALPRLDGKVSGA
Trigger: TGCTCCACTCACTTTACCGTCAAGACGAGGAAGGGCAATGTGGCAACAGAAATATCCACTGAAAGAGACCTGGGGCAGTGTGATCGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233242.5
ENST00000399256.4
ENST00000673739.1
ENST00000673882.1
CDS GCA 90 bp CTGCTCAGCTGGAGTAAGCAGGGCACTGACTTTGTGTTCAAGAGCTaGACTGATGCTTTTCCTAGACACGAGATGATGACTTGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: LLSWSKQGTDFVFKS*TDAFPRHEMMTCGA
Trigger: GGCTCCACAAGTCATCATCTCGTGTCTAGGAAAAGCATCAGTGCAGCTCTTGAACACAAAGTCAGTGCCCTGCTTACTCCAGCTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS GCA 90 bp ACAGATTCTGGGCCTTGTCCTTCCACTCTTGGTAGGTCCCAGTGGTaGCACTGGCTGCTTTCTGGAACCTCACGTCGATATCATCAATTT +
Preference number: 5 (lower is better)
Translates to: TDSGPCPSTLGRSQW*HWLLSGTSRRYHQF
Trigger: AAATTGATGATATCGACGTGAGGTTCCAGAAAGCAGCCAGTGGCACCACTGGGACCTACCAAGAGTGGAAGGACAAGGCCCAGAATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS GCA 90 bp CAAACCTCCATCTCTGAAGAAAGTACAAGCATCTTTTCGGGCTTGTaGAGCTGGGATCGTAAGGGAGTCTGGGCGATCCATCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QTSISEESTSIFSGL*SWDRKGVWAIHQKQ
Trigger: CTGCTTCTGATGGATCGCCCAGACTCCCTTACGATCCCAGCTGCACAAGCCCGAAAAGATGCTTGTACTTTCTTCAGAGATGGAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS CCA 90 bp TCCATCTCTGAAGAAAGTACAAGCATCTTTTCGGGCTTGTGCAGCTaGGATCGTAAGGGAGTCTGGGCGATCCATCAGAAGCAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: SISEESTSIFSGLCS*DRKGVWAIHQKQLS
Trigger: GGAAAGCTGCTTCTGATGGATCGCCCAGACTCCCTTACGATCCCAGCTGCACAAGCCCGAAAAGATGCTTGTACTTTCTTCAGAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACATCCTGGTGGCACTTCTaGAATCAGCAGTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LVSTKDTQISRACWCTSTSWWHF*NQQSQG
Trigger: TCCCTGGGACTGCTGATTCAAGAAGTGCCACCAGGA...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp CTGCTTATAGTCTACTGCCTACTGCAAGGCTGGCTCACTGTATGGTTTTATCAAGGGCGGGTCATGCCTTaGATGAGAGCAAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LLIVYCLLQGWLTVWFYQGRVMP*MRASGL
Trigger: CAGCCCACTTGCTCTCATCAAAGGCATGACCCGCCC...TTGATAAAACCATACAGTGAGCCAGCCTTGCAGTAGGCAGTAGACTATAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233242.5
CDS-3UTR CAA 90 bp GAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTAAAGATAGGGCGGGTCATGCCTTaGATGAGAGCAAGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: EFETSLTWLSTGLSLLKIGRVMP*MRASGL
Trigger: CAGCCCACTTGCTCTCATCAAAGGCATGACCCGCCC...TATCTTTAGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp AGGTCAGGAGTTCGAAACCAGCCTGACATGGTTGTCAACAGGCTTGTCTCTACTGGAGGTGATGTGGATTaGGTGCTCTCAAATGCGAGG +
Preference number: 5 (lower is better)
Translates to: RSGVRNQPDMVVNRLVSTGGDVD*VLSNAR
Trigger: CCTCGCATTTGAGAGCACCAAATCCACATCACCTCC...AGTAGAGACAAGCCTGTTGACAACCATGTCAGGCTGGTTTCGAACTCCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp CTTGTCTCTACTAAAGATACACAAATTAGCCGGGCATGCTGGTGCACGTCCACACAGCTTCGGCCTGCTTaGGAGGTGATGTGGATTTGG +
Preference number: 5 (lower is better)
Translates to: LVSTKDTQISRACWCTSTQLRPA*EVMWIW
Trigger: CCAAATCCACATCACCTCCAAAGCAGGCCGAAGCTG...TGTGGACGTGCACCAGCATGCCCGGCTAATTTGTGTATCTTTAGTAGAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTCAGTAACCAGCTTATaGAAGAGATTAGCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSSVTSL*KRLALW
Trigger: CCAGAGAGCTAATCTCTTCAATAAGCTGGTTACTGA...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp GGGCTGGACACCTCAATCAGCTGTGGCAAGAGAGATGTGACTGCTTCATCACTGCCCAGTGCAGTCATCTaGAATCTGTTCCATCAGGTA +
Preference number: 5 (lower is better)
Translates to: GLDTSISCGKRDVTASSLPSAVI*NLFHQV
Trigger: TACCTGATGGAACAGATTCAAGATGACTGCACTGGG...CAGTGATGAAGCAGTCACATCTCTCTTGCCACAGCTGATTGAGGTGTCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp AAATTAGCCGGGCATGCTGGTGCACGTCCACAGTCCCAGCTACTTGGGAGGCTGCAGTACAAAGCTTTGTaGACACTGTCTGGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: KLAGHAGARPQSQLLGRLQYKAL*TLSGKN
Trigger: ATTTTTCCCAGACAGTGTCAACAAAGCTTTGTACTG...CAGCCTCCCAAGTAGCTGGGACTGTGGACGTGCACCAGCATGCCCGGCTAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399256.4
CDS-3UTR CAA 90 bp AGAAGCAGTTTGGCAGGCGACCAGTGGGCGAGGATCTCACTTCTGGCTTCTGCTATCAAAATCCGGAATTaGGACTTCACTGGACAAGGT +
Preference number: 5 (lower is better)
Translates to: RSSLAGDQWARISLLASAIKIRN*DFTGQG
Trigger: ACCTTGTCCAGTGAAGTCCAAATTCCGGATTTTGAT...AGCAGAAGCCAGAAGTGAGATCCTCGCCCACTGGTCGCCTGCCAAACTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673739.1
CDS-3UTR CAA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTTGTTCAAGGTATATTaGACCCGGCCATCGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SEGGWHAHVSATGGCEWSLFKVY*TRPSLF
Trigger: AAAAAGCGATGGCCGGGTCAAATATACCTTGAACAA...GCTCCACTCACATCCTCCAGTGGCTGAAACGTGTGCATGCCAACCCCCTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673739.1
ENST00000673882.1
CDS-3UTR CAA 90 bp TCAGAAGGGGGTTGGCATGCACACGTTTCAGCCACTGGAGGATGTGAGTGGAGCTCTTGTGGTCATATGTaGTTTCTCCAGATCCTTGCA +