RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APMAP (Homo sapiens)

Ensembl gene IDs: ENSG00000101474

Ensembl transcript IDs: ENST00000217456.3, ENST00000451442.5

Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACTTGAACCACGACTGTGTCCACAGCTCCTCCTGGACCAGGCCTaGTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGC +
Preference number: 1 (lower is better)
Translates to: TLEPRLCPQLLLDQA*CLSVKTPGLRGRGS
Trigger: GCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCCTGGTCCAGGAGGAGCTGTGGACACAGTCGTGGTTCAAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR GCA 90 bp CTTGAACCACGACTGTGTCCACAGCTCCTCCTGGACCAGGCCTGGTaGCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGCTAT +
Preference number: 1 (lower is better)
Translates to: LEPRLCPQLLLDQAW*LSVKTPGLRGRGSY
Trigger: ATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCCTGGTCCAGGAGGAGCTGTGGACACAGTCGTGGTTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR GCA 90 bp CGCAGGACAGGGCCGCAGCAGCAAGCTCTCTGGGTAGTGCCTTACTaGTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGGAGCTTCCCA +
Preference number: 1 (lower is better)
Translates to: RRTGPQQQALWVVPY*STHLSPVPSARSFP
Trigger: TGGGAAGCTCCTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTGCTGCTGCGGCCCTGTCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR TCA 90 bp AGCTTTTCATACACACTATGGAGAGCCCACGCCCCACATAACCCTTaGGAACACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTG +
Preference number: 1 (lower is better)
Translates to: SFSYTLWRAHAPHNP*EHSSMSWLTRLSPL
Trigger: CAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATAGTGTGTATGAAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CCA 90 bp ACCCCTGCAGTAGGTCCCGAATTGCAGAATCATCCAATTCCAGCATaGTCAGCACGGAGATATTCACAGAAAGAAACCCAGCAAAGTCCT +
Preference number: 1 (lower is better)
Translates to: TPAVGPELQNHPIPA*SARRYSQKETQQSP
Trigger: AGGACTTTGCTGGGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTGCAATTCGGGACCTACTGCAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR TCA 90 bp TCAGCACGGAGATATTCACAGAAAGAAACCCAGCAAAGTCCTCTCTaGGCCGCTAGAGTCAACAAGCTTTTCATACACACTATGGAGAGC +
Preference number: 1 (lower is better)
Translates to: SARRYSQKETQQSPL*AARVNKLFIHTMES
Trigger: GCTCTCCATAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTTCTTTCTGTGAATATCTCCGTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CCA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTAAAGACAAGCCCAGGTaGGGCCCGGGCATCCTCGAG +
Preference number: 2 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSKDKPR*GPGILE
Trigger: CTCGAGGATGCCCGGGCCCCACCTGGGCTTGTCTTT...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CAA 90 bp GCCATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTaGAACCACGACTGTGTCCACAGCTCCTCCTGGACCAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: AIPTTSQGLTGACGH*NHDCVHSSSWTRPG
Trigger: ACCAGGCCTGGTCCAGGAGGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR TCA 90 bp TCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGGTGCATGTGGACACTTaGACCACGACTGTGTCCACA +
Preference number: 2 (lower is better)
Translates to: SLGSALLLHPPEPCSKCKVHVDT*TTTVST
Trigger: TGTGGACACAGTCGTGGTTCAAGTGTCCACATGCAC...CTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR GCA 90 bp TATGGAGAGCCCACGCCCCACATAACCCTTGAGAACACAGTTCCATGTCTTGGCTGGGTAGTGCCTTACTaGTCCACCCACCTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: YGEPTPHITLENTVPCLGWVVPY*STHLSP
Trigger: AGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCA...GCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CCA 90 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTCCTGGACCAGGCCTaGTGCCTGAGTGTGAAGACT +
Preference number: 2 (lower is better)
Translates to: HSHHLSGTNRCMWTLEPRLLDQA*CLSVKT
Trigger: AGTCTTCACACTCAGGCACCAGGCCTGGTCCAGGAG...TCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR GCA 90 bp TCCCTCTGCTCTTCCATCCCCACCACAACGAAGAAAGGTATGACCGCACGTTATCTGGACCAGGCCTGGTaGCTGAGTGTGAAGACTCCT +
Preference number: 2 (lower is better)
Translates to: SLCSSIPTTTKKGMTARYLDQAW*LSVKTP
Trigger: AGGAGTCTTCACACTCAGGCACCAGGCCTGGTCCAG...ATAACGTGCGGTCATACCTTTCTTCGTTGTGGTGGGGATGGAAGAGCAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CCA 90 bp AAACCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACAGACTCCTGGCCTGCGTaGCAGGGGCAGCTATCTGGG +
Preference number: 2 (lower is better)
Translates to: KPSKVLSEPLESTSFSYTDSWPA*QGQLSG
Trigger: CCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTC...TGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CCA 90 bp TATGGAGAGCCCACGCCCCACATAACCCTTGAGAACACAGTTCCATGTCTTGGCCAGCAGCAAGCTCTCTaGGTAGTGCCTTACTGCTCC +
Preference number: 2 (lower is better)
Translates to: YGEPTPHITLENTVPCLGQQQAL*VVPYCS
Trigger: GGAGCAGTAAGGCACTACCCAGAGAGCTTGCTGCTG...GCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CCA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTACTAACAGGTGCATGTaGACACTTGAACCACGACTG +
Preference number: 2 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSTNRCM*TLEPRL
Trigger: CAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGT...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR TCA 90 bp ACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCAGCAGCGTGCATGTGGACACTTaGACCACGACTGTGTCCACA +
Preference number: 2 (lower is better)
Translates to: TLYIVKKNFEAAGQGRSSVHVDT*TTTVST
Trigger: TGTGGACACAGTCGTGGTTCAAGTGTCCACATGCAC...GCTGCTGCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR GCA 90 bp TATGGAGAGCCCACGCCCCACATAACCCTTGAGAACACAGTTCCATGTCTTGGCTCAGGGACTAACAGGTaGATGTGGACACTTGAACCA +
Preference number: 2 (lower is better)
Translates to: YGEPTPHITLENTVPCLGSGTNR*MWTLEP
Trigger: TGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGA...GCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR TCA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTACTGCTCCACCCACCTaGGCCCTGTTCCAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: TVHILGSRGQEQRSQTRRTAPPT*ALFQVQ
Trigger: TTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGT...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR GCA 90 bp TCCCTCTGCTCTTCCATCCCCACCACAACGAAGAAAGGTATGACCGCACGTTATTCAGGGACTAACAGGTaGATGTGGACACTTGAACCA +
Preference number: 2 (lower is better)
Translates to: SLCSSIPTTTKKGMTARYSGTNR*MWTLEP
Trigger: TGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGA...ATAACGTGCGGTCATACCTTTCTTCGTTGTGGTGGGGATGGAAGAGCAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CAA 90 bp CACAGACAAGACGTTACTAAACGGACCCCTGCAGTAGGTCCCGAATaGCAGAATCATCCAATTCCAGCATGGTCAGCACGGAGATATTCA +
Preference number: 2 (lower is better)
Translates to: HRQDVTKRTPAVGPE*QNHPIPAWSARRYS
Trigger: TGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTGCAATTCGGGACCTACTGCAGGGGTCCGTTTAGTAACGTCTTGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR TCA 90 bp ATGAGCAAAGATGACATTAACACGTGCACTGTTCACATCTTGGGGTCTAGAGGTAGTAAAGAAGAACTTTaGGGCCGCAGGACAGGGCCG +
Preference number: 2 (lower is better)
Translates to: MSKDDINTCTVHILGSRGSKEEL*GRRTGP
Trigger: CGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACT...ACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CCA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTCACAGTTCCATGTCTTaGCTAACACGGCTCTCACCG +
Preference number: 2 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPHSSMS*LTRLSP
Trigger: CGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CCA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTAACTAACAGGTGCATGTaGACACTTGAACCACGACTG +
Preference number: 2 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLTNRCM*TLEPRL
Trigger: CAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGT...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR GCA 90 bp GTAGACATACTTGTGAAAATATACAGCAACTTGGGGCTTATAACACATGAGCAAGAGCCCTGTTCCAAGTaGAAGGAGCTTCCCAAATCC +
Preference number: 2 (lower is better)
Translates to: VDILVKIYSNLGLITHEQEPCSK*KELPKS
Trigger: GGATTTGGGAAGCTCCTTGCACTTGGAACAGGGCTC...TTGCTCATGTGTTATAAGCCCCAAGTTGCTGTATATTTTCACAAGTATGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR TCA 90 bp CAGAATCATCCAATTCCAGCATGGTCAGCACGGAGATATTCACAGAAAGAAACCCAACGAAGAAAGGTATaGCCGCACGTTATATATAGT +
Preference number: 2 (lower is better)
Translates to: QNHPIPAWSARRYSQKETQRRKV*PHVIYS
Trigger: ACTATATATAACGTGCGGTCATACCTTTCTTCGTTG...GGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CCA 90 bp CAGAATCATCCAATTCCAGCATGGTCAGCACGGAGATATTCACAGAAAGAAACCAATTTATGTTCCTCATaGCAGATATGTTACACTTCC +
Preference number: 2 (lower is better)
Translates to: QNHPIPAWSARRYSQKETNLCSS*QICYTS
Trigger: GGAAGTGTAACATATCTGCCATGAGGAACATAAATT...GGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CCA 72 bp CCACGACTGTGTCCACAGCTCCTCCTGGACCAGGCCTaGTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGC +
Preference number: 3 (lower is better)
Translates to: PRLCPQLLLDQA*CLSVKTPGLRG
Trigger: GCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCCTGGTCCAGGAGGAGCTGTGGACACAGTCGTGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR GCA 72 bp GGGCCGCAGCAGCAAGCTCTCTGGGTAGTGCCTTACTaGTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGG +
Preference number: 3 (lower is better)
Translates to: GPQQQALWVVPY*STHLSPVPSAR
Trigger: CCTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTGCTGCTGCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR GCA 72 bp AGCAGCCATTCCCACCACCTCTCAGGGACTAACAGGTaGATGTGGACACTTGAACCACGACTGTGTCCACAG +
Preference number: 3 (lower is better)
Translates to: SSHSHHLSGTNR*MWTLEPRLCPQ
Trigger: CTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CCA 72 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTaGACACTTGAACCACGACTGTGTCCACAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: HSHHLSGTNRCM*TLEPRLCPQLL
Trigger: GAGGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR TCA 72 bp TACACACTATGGAGAGCCCACGCCCCACATAACCCTTaGGAACACAGTTCCATGTCTTGGCTAACACGGCTC +
Preference number: 3 (lower is better)
Translates to: YTLWRAHAPHNP*EHSSMSWLTRL
Trigger: GAGCCGTGTTAGCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATAGTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CAA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTAGGTGCATGTGGACACTaGAACCACGACTGTGTCCAC +
Preference number: 3 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLGACGH*NHDCVH
Trigger: GTGGACACAGTCGTGGTTCAAGTGTCCACATGCACC...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CCA 72 bp GTAGGTCCCGAATTGCAGAATCATCCAATTCCAGCATaGTCAGCACGGAGATATTCACAGAAAGAAACCCAG +
Preference number: 3 (lower is better)
Translates to: VGPELQNHPIPA*SARRYSQKETQ
Trigger: CTGGGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTGCAATTCGGGACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR-3UTR CAA 90 bp GTAGACATACTTGTGAAAATATACAGCAACTTGGGGCTTATAACACATGAGCAAGGTGCATGTGGACACTaGAACCACGACTGTGTCCAC +
Preference number: 3 (lower is better)
Translates to: VDILVKIYSNLGLITHEQGACGH*NHDCVH
Trigger: GTGGACACAGTCGTGGTTCAAGTGTCCACATGCACC...TTGCTCATGTGTTATAAGCCCCAAGTTGCTGTATATTTTCACAAGTATGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CCA 72 bp GCAAAGATGACATTAACACGTGCACTGTTCACATCTTaGGGTCTAGAGGTCAAGAACAAAGATCACAGACAA +
Preference number: 3 (lower is better)
Translates to: AKMTLTRALFTS*GLEVKNKDHRQ
Trigger: TTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGCTATCTGGGAGGCGTCCGCCTCGCTCATaGTACGGGCGCCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VPECEDSWPAWQGQLSGRRPPRS*YGRQPH
Trigger: GTGAGGCTGGCGCCCGTACCATGAGCGAGGCGGACG...CCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS-3UTR GCA 90 bp CACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGTCGTCTGTGACGACCTaGGGCCGCAGGGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: HSSMSWLTRLSPLASTPLSSVTT*GRRGRR
Trigger: GCGCCGGCCCCTGCGGCCGCAGGTCGTCACAGACGA...CAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS-3UTR CCA 90 bp GTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGCTATCTGGGAGGGACTCCTGGCCTGCGTaGCAGGGGCAGCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: VPECEDSWPAWQGQLSGRDSWPA*QGQLSG
Trigger: CCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTC...CCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp GTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGCTATCTGGGAGGAGGCACCGCTGTCGCTaGGTTCTAGGACGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VPECEDSWPAWQGQLSGRRHRCR*VLGRGC
Trigger: ACAGCCTCGTCCTAGAACTCAGCGACAGCGGTGCCT...CCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp GTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGCTATCTGGGAGGAGTCCCATTGGGCCCTaGACGGATACCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VPECEDSWPAWQGQLSGRSPIGP*TDTQGS
Trigger: AGACCCCTGGGTATCCGTGCAGGGCCCAATGGGACT...CCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GGACCAGGCCTGGTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGATTCCAGCAGCATCATaGCTCCAAGCAGGGGAACGG +
Preference number: 4 (lower is better)
Translates to: GPGLVPECEDSWPAWQGQIPAAS*LQAGER
Trigger: CCGTTCCCCTGCTTGGAGCCATGATGCTGCTGGAAT...CTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCCTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGCACGGCTCTCACCGCTaGCCTCAACACCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HSSMSWLTRLSPLASTPLHGSHR*PQHPWA
Trigger: GGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTG...CAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp ACACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGCCATCATCGTCTGTaGCGACCTGCGGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQFHVLANTALTAGLNTPGHHRL*RPAAAG
Trigger: CCCTGCGGCCGCAGGTCGTCACAGACGATGATGGCC...AGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS-3UTR GCA 90 bp GGACCAGGCCTGGTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGTACGACCCGGCCATCTaGTGTCCCAGTAAACATCAC +
Preference number: 4 (lower is better)
Translates to: GPGLVPECEDSWPAWQGQYDPAI*CPSKHH
Trigger: GTGATGTTTACTGGGACAGCAGATGGCCGGGTCGTA...CTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGCTATCTGGGAGGTCTGCAGGAGACAGCTaGACTCCATTCGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: VPECEDSWPAWQGQLSGRSAGDS*TPFGNR
Trigger: GCGGTTCCCGAATGGAGTCCAGCTGTCTCCTGCAGA...CCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp TCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGCACGGCTCTCACCGCTaGCCTCAACACCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLGSALLLHPPEPCSKCKHGSHR*PQHPWA
Trigger: GGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTG...CTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGGCCATGCTGGCGCCCGTCATCTGTaGCCTCCATCACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: MSWLTRLSPLASTPLGHAGARHL*PPSPEA
Trigger: TGCTTCTGGTGATGGAGGGCACAGATGACGGGCGCC...AGCATGGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ACACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTAGTCCCATTGGGCCCTaGACGGATACCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TQFHVLANTALTAGLNTPSPIGP*TDTQGS
Trigger: AGACCCCTGGGTATCCGTGCAGGGCCCAATGGGACT...AGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp TCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGGAGCCCAGGTACAGGTaGCCATCGTGTTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: SLGSALLLHPPEPCSKCKEPRYR*PSCSCT
Trigger: GGTGCACGAACACGATGGGCACCTGTACCTGGGCTC...CTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGCTCCTGGACCAGGCCTaGTGCCTGAGTGTGAAGACT +
Preference number: 4 (lower is better)
Translates to: HSSMSWLTRLSPLASTPLLLDQA*CLSVKT
Trigger: AGTCTTCACACTCAGGCACCAGGCCTGGTCCAGGAG...CAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGGCCATGCTTGTTCTTCCCCTCAATaGGTGTCTCGGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: MSWLTRLSPLASTPLGHACSSPQ*VSRRTA
Trigger: TGCTGTCCTCCGAGACACCCATTGAGGGGAAGAACA...AGCATGGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCGACTCCTGGCCTGCGTaGCAGGGGCAGCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: DRTLYIVKKNFEAAGQGRDSWPA*QGQLSG
Trigger: CCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTC...GCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGAAAAGACAAGCCCAGGTaGGGCCCGGGCATCCTCGAG +
Preference number: 4 (lower is better)
Translates to: HSHHLSGTNRCMWTLEPRKDKPR*GPGILE
Trigger: CTCGAGGATGCCCGGGCCCCACCTGGGCTTGTCTTT...TCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp TCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGCAAGCAGGGGAACGGTaGGAGAAACAGCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: SLGSALLLHPPEPCSKCKQAGER*EKQPAS
Trigger: TGATGCTGGCTGTTTCTCTCACCGTTCCCCTGCTTG...CTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp ACACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTAGTAAAGAAGAACTTTaGGGCCGCAGGACAGGGCCG +
Preference number: 4 (lower is better)
Translates to: TQFHVLANTALTAGLNTPSKEEL*GRRTGP
Trigger: CGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACT...AGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCCACAGCTCCCTGGACCAGGCCTGGTaGCTGAGTGTGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: QGLTGACGHLNHDCVHSSLDQAW*LSVKTP
Trigger: AGGAGTCTTCACACTCAGGCACCAGGCCTGGTCCAG...GGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp TCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGCAAAGAGAGTCCCATTaGGCCCTGCACGGATACCCA +
Preference number: 4 (lower is better)
Translates to: SLGSALLLHPPEPCSKCKQRESH*ALHGYP
Trigger: TGGGTATCCGTGCAGGGCCCAATGGGACTCTCTTTG...CTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ACACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTCAGCAGCAAGCTCTCTaGGTAGTGCCTTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TQFHVLANTALTAGLNTPQQQAL*VVPYCS
Trigger: GGAGCAGTAAGGCACTACCCAGAGAGCTTGCTGCTG...AGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CAA 72 bp ACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTaGAACCACGACTGTGTCCACAGCTCCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: TTSQGLTGACGH*NHDCVHSSSWT
Trigger: GGTCCAGGAGGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGAACTGCTCCACCCACCTaGGCCCTGTTCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: HSHHLSGTNRCMWTLEPRTAPPT*ALFQVQ
Trigger: TTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGT...TCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp TCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGCAGCAAAGTCCTCTCTaGGCCGCTAGAGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: SLGSALLLHPPEPCSKCKQQSPL*AARVNK
Trigger: CTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTG...CTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTCAGCAAAGTCCTCTCTaGGCCGCTAGAGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSQQSPL*AARVNK
Trigger: CTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTG...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp TCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGCAAGCAGGACAAAGTCTTCTaGAGGAGACAGCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: SLGSALLLHPPEPCSKCKQDKVF*RRQLDS
Trigger: GGAGTCCAGCTGTCTCCTGCAGAAGACTTTGTCCTG...CTTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCAGCCCATCGGGATCATaGAGGCTTCTCCGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TTSQGLTGACGHLNHDCVSPSGS*RLLRKA
Trigger: TGCCTTCCGGAGAAGCCTGCATGATCCCGATGGGCT...GACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGGCCATGCTTCAGGGACTAACAGGTaGATGTGGACACTTGAACCA +
Preference number: 4 (lower is better)
Translates to: MSWLTRLSPLASTPLGHASGTNR*MWTLEP
Trigger: TGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGA...AGCATGGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGGCCATGCTCCCCAATATGTGCTATaGACTCCGGTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: MSWLTRLSPLASTPLGHAPQYVL*TPVQQV
Trigger: AACTTGTTGGACCGGAGTCCATAGCACATATTGGGG...AGCATGGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGTTCGTATCCTGGCCATaGTTGTTTCTGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HSSMSWLTRLSPLASTPLFVSWP*LFLPPG
Trigger: TCCTGGTGGCAGAAACAACCATGGCCAGGATACGAA...CAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCCTCCTGGACCAGGCCTaGTGCCTGAGTGTGAAGACT +
Preference number: 4 (lower is better)
Translates to: TTSQGLTGACGHLNHDCVLLDQA*CLSVKT
Trigger: AGTCTTCACACTCAGGCACCAGGCCTGGTCCAGGAG...GACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGGCCATGCTACTAACAGGTGCATGTaGACACTTGAACCACGACTG +
Preference number: 4 (lower is better)
Translates to: MSWLTRLSPLASTPLGHATNRCM*TLEPRL
Trigger: CAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGT...AGCATGGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp GACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCACTGCTCCACCCACCTaGGCCCTGTTCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: DRTLYIVKKNFEAAGQGRTAPPT*ALFQVQ
Trigger: TTGCACTTGGAACAGGGCTCAGGTGGGTGGAGCAGT...GCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTCACATCCCCAATATGTaGTATGGACTCCGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSHIPNM*YGLRSN
Trigger: GTTGGACCGGAGTCCATAGCACATATTGGGGATGTG...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGGCCATGGTTGTTTCTaGCACCAGGACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSGHGCF*HQDKVF
Trigger: GAAGACTTTGTCCTGGTGGCAGAAACAACCATGGCC...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGGCCATGCTTCGCAGCTTCGTATTTaGATGCAGAACACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: MSWLTRLSPLASTPLGHASQLRI*MQNTKQ
Trigger: TTGCTTGGTGTTCTGCATCCAAATACGAAGCTGCGA...AGCATGGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp TCCCTCTGCTCTTCCATCCCCACCACAACGAAGAAAGGTATGACCGCACGTTATTCTGCAGGAGACAGCTaGACTCCATTCGGGAACCGC +
Preference number: 4 (lower is better)
Translates to: SLCSSIPTTTKKGMTARYSAGDS*TPFGNR
Trigger: GCGGTTCCCGAATGGAGTCCAGCTGTCTCCTGCAGA...ATAACGTGCGGTCATACCTTTCTTCGTTGTGGTGGGGATGGAAGAGCAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGAGACTCTTCGTATCCTaGCCATGGTTGTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HSSMSWLTRLSPLASTPLRLFVS*PWLFLP
Trigger: TGGCAGAAACAACCATGGCCAGGATACGAAGAGTCT...CAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp GACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCCAAGCAGGGGAACGGTaGGAGAAACAGCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: DRTLYIVKKNFEAAGQGRQAGER*EKQPAS
Trigger: TGATGCTGGCTGTTTCTCTCACCGTTCCCCTGCTTG...GCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp AAACCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACAGTTCGTGCACCTCGCTaGTGTAGGTGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: KPSKVLSEPLESTSFSYTVRAPR*CRWPPA
Trigger: GGCTGGTGGCCACCTACATCAGCGAGGTGCACGAAC...TGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGTTCAAACAGCCTTTCTaGCTGTCGCAGCTTCGTATT +
Preference number: 4 (lower is better)
Translates to: HSSMSWLTRLSPLASTPLFKQPF*LSQLRI
Trigger: AATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAA...CAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACAGGACAAAGTCTTCTaGAGGAGACAGCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: HSHHLSGTNRCMWTLEPRQDKVF*RRQLDS
Trigger: GGAGTCCAGCTGTCTCCTGCAGAAGACTTTGTCCTG...TCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTAGAGCCCAGGTACAGGTaGCCATCGTGTTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLEPRYR*PSCSCT
Trigger: GGTGCACGAACACGATGGGCACCTGTACCTGGGCTC...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGAGAGCCCTGTTCCAAGTaGAAGGAGCTTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: HSHHLSGTNRCMWTLEPREPCSK*KELPKS
Trigger: GGATTTGGGAAGCTCCTTGCACTTGGAACAGGGCTC...TCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTAGGGCCATGCTCCCTCTaGTCTTCCATCCCCACCACA +
Preference number: 4 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLGPCSL*SSIPTT
Trigger: TGTGGTGGGGATGGAAGAGCAGAGGGAGCATGGCCC...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGATGTTCTTCCCCTCAATaGGTGTCTCGGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: HSHHLSGTNRCMWTLEPRCSSPQ*VSRRTA
Trigger: TGCTGTCCTCCGAGACACCCATTGAGGGGAAGAACA...TCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGCTATCTGGGAGGAAACTTTTACTTCCCTaGTCACAGTATCATACTCCA +
Preference number: 4 (lower is better)
Translates to: VPECEDSWPAWQGQLSGRKLLLP*SQYHTP
Trigger: TGGAGTATGATACTGTGACCAGGGAAGTAAAAGTTT...CCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCCACAGCTCCTTCGTATCCTGGCCATaGTTGTTTCTGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: QGLTGACGHLNHDCVHSSFVSWP*LFLPPG
Trigger: TCCTGGTGGCAGAAACAACCATGGCCAGGATACGAA...GGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp TATGGAGAGCCCACGCCCCACATAACCCTTGAGAACACAGTTCCATGTCTTGGCGGGCCGGATGTTGTCTaGAAATCCAGGCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: YGEPTPHITLENTVPCLGGPDVV*KSRHVL
Trigger: GAGAACATGCCTGGATTTCCAGACAACATCCGGCCC...GCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTAAAGACAAGCCCAGGTaGGGCCCGGGCATCCTCGAG +
Preference number: 4 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPKDKPR*GPGILE
Trigger: CTCGAGGATGCCCGGGCCCCACCTGGGCTTGTCTTT...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTTTTTCATACACACTATaGAGAGCCCACGCCCCACAT +
Preference number: 4 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSFSYTL*RAHAPH
Trigger: ATGTGGGGCGTGGGCTCTCCATAGTGTGTATGAAAA...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGCACTGTTCACATCTTaGGGTCTAGAGGTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSALFTS*GLEVKN
Trigger: GTTCTTGACCTCTAGACCCCAAGATGTGAACAGTGC...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CAA 72 bp GACGTTACTAAACGGACCCCTGCAGTAGGTCCCGAATaGCAGAATCATCCAATTCCAGCATGGTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: DVTKRTPAVGPE*QNHPIPAWSAR
Trigger: CCGTGCTGACCATGCTGGAATTGGATGATTCTGCAATTCGGGACCTACTGCAGGGGTCCGTTTAGTAACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTGTTCGTGCACCTCGCTaGTGTAGGTGGCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: TVHILGSRGQEQRSQTRRVRAPR*CRWPPA
Trigger: GGCTGGTGGCCACCTACATCAGCGAGGTGCACGAAC...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp TCCCTCTGCTCTTCCATCCCCACCACAACGAAGAAAGGTATGACCGCACGTTATGTGCATGTGGACACTTaGACCACGACTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SLCSSIPTTTKKGMTARYVHVDT*TTTVST
Trigger: TGTGGACACAGTCGTGGTTCAAGTGTCCACATGCAC...ATAACGTGCGGTCATACCTTTCTTCGTTGTGGTGGGGATGGAAGAGCAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGAGCCCCACATAACCCTTaGGAACACAGTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: HSHHLSGTNRCMWTLEPRAPHNP*EHSSMS
Trigger: AGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGC...TCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp TATGGAGAGCCCACGCCCCACATAACCCTTGAGAACACAGTTCCATGTCTTGGCGGCCATGGTTGTTTCTaGCACCAGGACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: YGEPTPHITLENTVPCLGGHGCF*HQDKVF
Trigger: GAAGACTTTGTCCTGGTGGCAGAAACAACCATGGCC...GCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTGGGCCATGCTCCCTCTaGTCTTCCATCCCCACCACA +
Preference number: 4 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPGPCSL*SSIPTT
Trigger: TGTGGTGGGGATGGAAGAGCAGAGGGAGCATGGCCC...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCCACAGCTCCCCCCAATATGTGCTATaGACTCCGGTCCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: QGLTGACGHLNHDCVHSSPQYVL*TPVQQV
Trigger: AACTTGTTGGACCGGAGTCCATAGCACATATTGGGG...GGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCAGCAGCCAGCAGCAAGCTCTCTaGGTAGTGCCTTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TLYIVKKNFEAAGQGRSSQQQAL*VVPYCS
Trigger: GGAGCAGTAAGGCACTACCCAGAGAGCTTGCTGCTG...GCTGCTGCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTAGGCACCGCTGTCGCTaGGTTCTAGGACGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVHILGSRGQEQRSQTRRRHRCR*VLGRGC
Trigger: ACAGCCTCGTCCTAGAACTCAGCGACAGCGGTGCCT...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp AAACCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACAAGAGGAAGGGGGACCTaGAAGAGCCCAGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: KPSKVLSEPLESTSFSYTRGRGT*KSPGTG
Trigger: ACCTGTACCTGGGCTCTTTCAGGTCCCCCTTCCTCT...TGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp GTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACGGCGCCCGTCATCTGTaGCCTCCATCACCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VHILGSRGQEQRSQTRRYGARHL*PPSPEA
Trigger: TGCTTCTGGTGATGGAGGGCACAGATGACGGGCGCC...GTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp AAACCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACATGGGTAGTGCCTTACTaGTCCACCCACCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KPSKVLSEPLESTSFSYTWVVPY*STHLSP
Trigger: AGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCA...TGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTACAAAGAGAGTCCCATTaGGCCCTGCACGGATACCCA +
Preference number: 4 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLQRESH*ALHGYP
Trigger: TGGGTATCCGTGCAGGGCCCAATGGGACTCTCTTTG...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCCACAGCTCCCATCCAATTCCAGCATaGTCAGCACGGAGATATTCA +
Preference number: 4 (lower is better)
Translates to: QGLTGACGHLNHDCVHSSHPIPA*SARRYS
Trigger: TGAATATCTCCGTGCTGACCATGCTGGAATTGGATG...GGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp ATGAGCAAAGATGACATTAACACGTGCACTGTTCACATCTTGGGGTCTAGAGGTAGAGGAAGGGGGACCTaGAAGAGCCCAGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: MSKDDINTCTVHILGSRGRGRGT*KSPGTG
Trigger: ACCTGTACCTGGGCTCTTTCAGGTCCCCCTTCCTCT...ACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp AAACCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACAAGTAAAGAAGAACTTTaGGGCCGCAGGACAGGGCCG +
Preference number: 4 (lower is better)
Translates to: KPSKVLSEPLESTSFSYTSKEEL*GRRTGP
Trigger: CGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACT...TGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTCAACGAAGAAAGGTATaGCCGCACGTTATATATAGT +
Preference number: 4 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSQRRKV*PHVIYS
Trigger: ACTATATATAACGTGCGGTCATACCTTTCTTCGTTG...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp CAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCCACAGCTCCTTCATCACCGTCTCTTaGCTAAAGAGCAGATCACAA +
Preference number: 4 (lower is better)
Translates to: QGLTGACGHLNHDCVHSSFITVS*LKSRSQ
Trigger: TTGTGATCTGCTCTTTAGTCAAGAGACGGTGATGAA...GGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451442.5
CDS-3UTR GCA 90 bp ATGAGCAAAGATGACATTAACACGTGCACTGTTCACATCTTGGGGTCTAGAGGTAGCCCATCGGGATCATaGAGGCTTCTCCGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: MSKDDINTCTVHILGSRGSPSGS*RLLRKA
Trigger: TGCCTTCCGGAGAAGCCTGCATGATCCCGATGGGCT...ACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ATGAGCAAAGATGACATTAACACGTGCACTGTTCACATCTTGGGGTCTAGAGGTCTGGACCAGGCCTGGTaGCTGAGTGTGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: MSKDDINTCTVHILGSRGLDQAW*LSVKTP
Trigger: AGGAGTCTTCACACTCAGGCACCAGGCCTGGTCCAG...ACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp TCCCTCTGCTCTTCCATCCCCACCACAACGAAGAAAGGTATGACCGCACGTTATGAAGCTGAGAGGCTGTaGATCTATAGGAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SLCSSIPTTTKKGMTARYEAERL*IYRRFQ
Trigger: CTGGAATCTCCTATAGATCCACAGCCTCTCAGCTTC...ATAACGTGCGGTCATACCTTTCTTCGTTGTGGTGGGGATGGAAGAGCAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp CAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCCACAGCTCCGGGGCTTATAACACATaGGCAAAGATGACATTAACA +
Preference number: 4 (lower is better)
Translates to: QGLTGACGHLNHDCVHSSGAYNT*AKMTLT
Trigger: TGTTAATGTCATCTTTGCTCATGTGTTATAAGCCCC...GGAGCTGTGGACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp TCCCTCTGCTCTTCCATCCCCACCACAACGAAGAAAGGTATGACCGCACGTTATTTCAAACAGCCTTTCTaGCTGTCGCAGCTTCGTATT +
Preference number: 4 (lower is better)
Translates to: SLCSSIPTTTKKGMTARYFKQPF*LSQLRI
Trigger: AATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAA...ATAACGTGCGGTCATACCTTTCTTCGTTGTGGTGGGGATGGAAGAGCAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTGGGCCGGATGTTGTCTaGAAATCCAGGCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPGPDVV*KSRHVL
Trigger: GAGAACATGCCTGGATTTCCAGACAACATCCGGCCC...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp GTAGACATACTTGTGAAAATATACAGCAACTTGGGGCTTATAACACATGAGCAAGAAACCACCTCACACTaGGCGGCGCCGGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: VDILVKIYSNLGLITHEQETTSH*AAPAQT
Trigger: AGTCTGAGCCGGCGCCGCTCAGTGTGAGGTGGTTTC...TTGCTCATGTGTTATAAGCCCCAAGTTGCTGTATATTTTCACAAGTATGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS-3UTR TCA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTGCCCCACATAACCCTTaGGAACACAGTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPAPHNP*EHSSMS
Trigger: AGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGC...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCAGCAGCAGCTTCGTATTTGGATaGAGAACACCAAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TLYIVKKNFEAAGQGRSSSFVFG*RTPSKS
Trigger: GCTCTTGCTTGGTGTTCTGCATCCAAATACGAAGCT...GCTGCTGCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CAGAATCATCCAATTCCAGCATGGTCAGCACGGAGATATTCACAGAAAGAAACCTACGACCCGGCCATCTaGTGTCCCAGTAAACATCAC +
Preference number: 4 (lower is better)
Translates to: QNHPIPAWSARRYSQKETYDPAI*CPSKHH
Trigger: GTGATGTTTACTGGGACAGCAGATGGCCGGGTCGTA...GGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTGAGCCCTGTTCCAAGTaGAAGGAGCTTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: TVHILGSRGQEQRSQTRREPCSK*KELPKS
Trigger: GGATTTGGGAAGCTCCTTGCACTTGGAACAGGGCTC...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTAAGACTCTTCGTATCCTaGCCATGGTTGTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLRLFVS*PWLFLP
Trigger: TGGCAGAAACAACCATGGCCAGGATACGAAGAGTCT...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACCACAGTTCCATGTCTTaGCTAACACGGCTCTCACCG +
Preference number: 4 (lower is better)
Translates to: VHILGSRGQEQRSQTRRYHSSMS*LTRLSP
Trigger: CGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG...GTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ATGAGCAAAGATGACATTAACACGTGCACTGTTCACATCTTGGGGTCTAGAGGTCACAGTTCCATGTCTTaGCTAACACGGCTCTCACCG +
Preference number: 4 (lower is better)
Translates to: MSKDDINTCTVHILGSRGHSSMS*LTRLSP
Trigger: CGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTG...ACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CAGAATCATCCAATTCCAGCATGGTCAGCACGGAGATATTCACAGAAAGAAACCCACATCCCCAATATGTaGTATGGACTCCGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: QNHPIPAWSARRYSQKETHIPNM*YGLRSN
Trigger: GTTGGACCGGAGTCCATAGCACATATTGGGGATGTG...GGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTAGATGACATTAACACGTaGACTGTTCACATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLDDINT*TVHILG
Trigger: CCCCAAGATGTGAACAGTGCACGTGTTAATGTCATC...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTGAAGCTGAGAGGCTGTaGATCTATAGGAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPEAERL*IYRRFQ
Trigger: CTGGAATCTCCTATAGATCCACAGCCTCTCAGCTTC...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTGTGTCAAACTTTTACTTCCCTaGTCACAGTATCATACTCCA +
Preference number: 4 (lower is better)
Translates to: TTSQGLTGACGHLNHDCVKLLLP*SQYHTP
Trigger: TGGAGTATGATACTGTGACCAGGGAAGTAAAAGTTT...GACACAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTACTAACAGGTGCATGTaGACACTTGAACCACGACTG +
Preference number: 4 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPTNRCM*TLEPRL
Trigger: CAGTCGTGGTTCAAGTGTCCACATGCACCTGTTAGT...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTACATCCAATTCCAGCATaGTCAGCACGGAGATATTCA +
Preference number: 4 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLHPIPA*SARRYS
Trigger: TGAATATCTCCGTGCTGACCATGCTGGAATTGGATG...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp CCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACTATCCGGTCCAACAAGTTaGTTTTCAAACAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PSKVLSEPLESTSFSYTLSGPTS*FSNSLS
Trigger: AGAAAGGCTGTTTGAAAATCAACTTGTTGGACCGGA...TAGTGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTATCTTCCTCCCATCCTaGGTGACTGTAAGATCATTC +
Preference number: 4 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPIFLPS*VTVRSF
Trigger: GAATGATCTTACAGTCACTCAGGATGGGAGGAAGAT...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTCAGGGACTAACAGGTaGATGTGGACACTTGAACCA +
Preference number: 4 (lower is better)
Translates to: TVHILGSRGQEQRSQTRRSGTNR*MWTLEP
Trigger: TGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGA...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp AACGAAGAAAGGTATGACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCATTCCAGCAGCATCATaGCTCCAAGCAGGGGAACGG +
Preference number: 4 (lower is better)
Translates to: NEERYDRTLYIVKKNFEAIPAAS*LQAGER
Trigger: CCGTTCCCCTGCTTGGAGCCATGATGCTGCTGGAAT...GGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTCATACCTTTCTTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCAGCAGCAACCAAACCGGGCAATaGTCTCTATTTCACCATTTT +
Preference number: 4 (lower is better)
Translates to: TLYIVKKNFEAAGQGRSSNQTGQ*SLFHHF
Trigger: AAAATGGTGAAATAGAGACCATTGCCCGGTTTGGTT...GCTGCTGCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp GTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACGCACTGTTCACATCTTaGGGTCTAGAGGTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: VHILGSRGQEQRSQTRRYALFTS*GLEVKN
Trigger: GTTCTTGACCTCTAGACCCCAAGATGTGAACAGTGC...GTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp GTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACATCTTCCTCCCATCCTaGGTGACTGTAAGATCATTC +
Preference number: 4 (lower is better)
Translates to: VHILGSRGQEQRSQTRRYIFLPS*VTVRSF
Trigger: GAATGATCTTACAGTCACTCAGGATGGGAGGAAGAT...GTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp ATGAGCAAAGATGACATTAACACGTGCACTGTTCACATCTTGGGGTCTAGAGGTAGCTTCGTATTTGGATaGAGAACACCAAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: MSKDDINTCTVHILGSRGSFVFG*RTPSKS
Trigger: GCTCTTGCTTGGTGTTCTGCATCCAAATACGAAGCT...ACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp AAACCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACATTCGGGAACCGCAGCTaGTCCAATAAAACTTTTACT +
Preference number: 4 (lower is better)
Translates to: KPSKVLSEPLESTSFSYTFGNRS*SNKTFT
Trigger: AGTAAAAGTTTTATTGGACCAGCTGCGGTTCCCGAA...TGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp AAACCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACACAACGAAGAAAGGTATaGCCGCACGTTATATATAGT +
Preference number: 4 (lower is better)
Translates to: KPSKVLSEPLESTSFSYTQRRKV*PHVIYS
Trigger: ACTATATATAACGTGCGGTCATACCTTTCTTCGTTG...TGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ATGAGCAAAGATGACATTAACACGTGCACTGTTCACATCTTGGGGTCTAGAGGTTTCGGGAACCGCAGCTaGTCCAATAAAACTTTTACT +
Preference number: 4 (lower is better)
Translates to: MSKDDINTCTVHILGSRGFGNRS*SNKTFT
Trigger: AGTAAAAGTTTTATTGGACCAGCTGCGGTTCCCGAA...ACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
3UTR CAA 72 bp AGCAAAGATGACATTAACACGTGCACTGTTCACATCTaGGGGTCTAGAGGTCAAGAACAAAGATCACAGACA +
Preference number: 4 (lower is better)
Translates to: SKDDINTCTVHI*GSRGQEQRSQT
Trigger: TGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR TCA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTGGGGCTTATAACACATaGGCAAAGATGACATTAACA +
Preference number: 4 (lower is better)
Translates to: TVHILGSRGQEQRSQTRRGAYNT*AKMTLT
Trigger: TGTTAATGTCATCTTTGCTCATGTGTTATAAGCCCC...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ATGAGCAAAGATGACATTAACACGTGCACTGTTCACATCTTGGGGTCTAGAGGTAACCAAACCGGGCAATaGTCTCTATTTCACCATTTT +
Preference number: 4 (lower is better)
Translates to: MSKDDINTCTVHILGSRGNQTGQ*SLFHHF
Trigger: AAAATGGTGAAATAGAGACCATTGCCCGGTTTGGTT...ACCTCTAGACCCCAAGATGTGAACAGTGCACGTGTTAATGTCATCTTTGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp AACGAAGAAAGGTATGACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCTTTTCATACACACTATaGAGAGCCCACGCCCCACAT +
Preference number: 4 (lower is better)
Translates to: NEERYDRTLYIVKKNFEAFSYTL*RAHAPH
Trigger: ATGTGGGGCGTGGGCTCTCCATAGTGTGTATGAAAA...GGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTCATACCTTTCTTCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR GCA 90 bp GTAGACATACTTGTGAAAATATACAGCAACTTGGGGCTTATAACACATGAGCAAGATGACATTAACACGTaGACTGTTCACATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VDILVKIYSNLGLITHEQDDINT*TVHILG
Trigger: CCCCAAGATGTGAACAGTGCACGTGTTAATGTCATC...TTGCTCATGTGTTATAAGCCCCAAGTTGCTGTATATTTTCACAAGTATGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CCA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTAATTTATGTTCCTCATaGCAGATATGTTACACTTCC +
Preference number: 4 (lower is better)
Translates to: TVHILGSRGQEQRSQTRRNLCSS*QICYTS
Trigger: GGAAGTGTAACATATCTGCCATGAGGAACATAAATT...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 90 bp CCGTCCTTAGCCTCCGGGGCCTGGCCATCATCGTCTGTGACGACCTaGGGCCGCAGGGGCCGGCGCTGTCGCAGCCCGTCCGCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: PSLASGAWPSSSVTT*GRRGRRCRSPSASL
Trigger: GAGCGAGGCGGACGGGCTGCGACAGCGCCGGCCCCTGCGGCCGCAGGTCGTCACAGACGATGATGGCCAGGCCCCGGAGGCTAAGGACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS CCA 90 bp GCGGCCGCAGGGGCCGGCGCTGTCGCAGCCCGTCCGCCTCGCTCATaGTACGGGCGCCAGCCTCACCCGCAGAAACCACCTCACACTGAG +
Preference number: 5 (lower is better)
Translates to: AAAGAGAVAARPPRS*YGRQPHPQKPPHTE
Trigger: CTCAGTGTGAGGTGGTTTCTGCGGGTGAGGCTGGCGCCCGTACCATGAGCGAGGCGGACGGGCTGCGACAGCGCCGGCCCCTGCGGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS CCA 90 bp ACAGCTCCTCCTGGACCAGGCCTGGTGCCTGAGTGTGAAGACTCCTaGCCTGCGTGGCAGGGGCAGCTATCTGGGAGGGCTAAACAGCCT +
Preference number: 5 (lower is better)
Translates to: TAPPGPGLVPECEDS*PAWQGQLSGRAKQP
Trigger: AGGCTGTTTAGCCCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCCTGGTCCAGGAGGAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GGACCAGGCCTGGTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGAAGAGCGGGGGTTCTTaGAAGCTGAGAGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: GPGLVPECEDSWPAWQGQKSGGS*KLRGCG
Trigger: TCCACAGCCTCTCAGCTTCAAAGAACCCCCGCTCTT...CTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCCTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS TCA 90 bp GCCCATCGGGATCATGCAGGCTTCTCCGGAAGGCACCGCTGTCGCTaGGTTCTAGGACGAGGCTGTACCGCGGCACAAACTTCATCACCG +
Preference number: 5 (lower is better)
Translates to: AHRDHAGFSGRHRCR*VLGRGCTAAQTSSP
Trigger: CGGTGATGAAGTTTGTGCCGCGGTACAGCCTCGTCCTAGAACTCAGCGACAGCGGTGCCTTCCGGAGAAGCCTGCATGATCCCGATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGCTATCTGGGAGGTCATCATCTCGGGTTTaGCAAGGGCCCGAACCAAAC +
Preference number: 5 (lower is better)
Translates to: VPECEDSWPAWQGQLSGRSSSRV*QGPEPN
Trigger: GTTTGGTTCGGGCCCTTGCAAAACCCGAGATGATGA...CCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GGACCAGGCCTGGTGCCTGAGTGTGAAGACTCCTGGCCTGCGTGGCAGGGGCAGTCTCGTCTTTGCCATTaGCTGCTAGAATCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: GPGLVPECEDSWPAWQGQSRLCH*LLESVK
Trigger: TTTCACCGATTCTAGCAGCAAATGGCAAAGACGAGA...CTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCCTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp ATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGGCCATGCTTCATCATCTCGGGTTTaGCAAGGGCCCGAACCAAAC +
Preference number: 5 (lower is better)
Translates to: MSWLTRLSPLASTPLGHASSSRV*QGPEPN
Trigger: GTTTGGTTCGGGCCCTTGCAAAACCCGAGATGATGA...AGCATGGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTAAGAGCGGGGGTTCTTaGAAGCTGAGAGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSKSGGS*KLRGCG
Trigger: TCCACAGCCTCTCAGCTTCAAAGAACCCCCGCTCTT...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp ACACAGTTCCATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGTGCATGTGGACACTaGAACCACGACTGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: TQFHVLANTALTAGLNTPGACGH*NHDCVH
Trigger: GTGGACACAGTCGTGGTTCAAGTGTCCACATGCACC...AGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 90 bp TCGTATCCTGGCCATGGTTGTTTCTGCCACCAGGACAAAGTCTTCTaGAGGAGACAGCTGGACTCCATTCGGGAACCGCAGCTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: SYPGHGCFCHQDKVF*RRQLDSIREPQLVQ
Trigger: TTGGACCAGCTGCGGTTCCCGAATGGAGTCCAGCTGTCTCCTGCAGAAGACTTTGTCCTGGTGGCAGAAACAACCATGGCCAGGATACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp TATGGAGAGCCCACGCCCCACATAACCCTTGAGAACACAGTTCCATGTCTTGGCACAAAGAGAGTCCCATaGGGCCCTGCACGGATACCC +
Preference number: 5 (lower is better)
Translates to: YGEPTPHITLENTVPCLGTKRVP*GPARIP
Trigger: GGGTATCCGTGCAGGGCCCAATGGGACTCTCTTTGT...GCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp ATGTCTTGGCTAACACGGCTCTCACCGCTGGCCTCAACACCCCTGGGCCATGCTGCAGTAGGTCCCGAATaGCAGAATCATCCAATTCCA +
Preference number: 5 (lower is better)
Translates to: MSWLTRLSPLASTPLGHAAVGPE*QNHPIP
Trigger: TGGAATTGGATGATTCTGCAATTCGGGACCTACTGC...AGCATGGCCCAGGGGTGTTGAGGCCAGCGGTGAGAGCCGTGTTAGCCAAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp CAAGCTCTCTGGGTAGTGCCTTACTGCTCCACCCACCTGAGCCCTGTTCCAAGTGTCGCAGCTTCGTATTaGGATGCAGAACACCAAGCA +
Preference number: 5 (lower is better)
Translates to: QALWVVPYCSTHLSPVPSVAASY*DAEHQA
Trigger: TGCTTGGTGTTCTGCATCCAAATACGAAGCTGCGAC...ACTTGGAACAGGGCTCAGGTGGGTGGAGCAGTAAGGCACTACCCAGAGAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCACAAAGAGAGTCCCATaGGGCCCTGCACGGATACCC +
Preference number: 5 (lower is better)
Translates to: DRTLYIVKKNFEAAGQGRTKRVP*GPARIP
Trigger: GGGTATCCGTGCAGGGCCCAATGGGACTCTCTTTGT...GCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CCA 90 bp CTCCATTCGGGAACCGCAGCTGGTCCAATAAAACTTTTACTTCCCTaGTCACAGTATCATACTCCAGCAGGCGCCCGTCATCTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LHSGTAAGPIKLLLP*SQYHTPAGARHLCP
Trigger: AGGGCACAGATGACGGGCGCCTGCTGGAGTATGATACTGTGACCAGGGAAGTAAAAGTTTTATTGGACCAGCTGCGGTTCCCGAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 90 bp CAGGCCAGAAACGTAGACTCTTCGTATCCTGGCCATGGTTGTTTCTaGCACCAGGACAAAGTCTTCTGCAGGAGACAGCTGGACTCCATT +
Preference number: 5 (lower is better)
Translates to: QARNVDSSYPGHGCF*HQDKVFCRRQLDSI
Trigger: AATGGAGTCCAGCTGTCTCCTGCAGAAGACTTTGTCCTGGTGGCAGAAACAACCATGGCCAGGATACGAAGAGTCTACGTTTCTGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp ACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCAGCAGCGGTGCATGTGGACACTaGAACCACGACTGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: TLYIVKKNFEAAGQGRSSGACGH*NHDCVH
Trigger: GTGGACACAGTCGTGGTTCAAGTGTCCACATGCACC...GCTGCTGCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCACACAGTTCCATGTCTaGGCTAACACGGCTCTCACC +
Preference number: 5 (lower is better)
Translates to: DRTLYIVKKNFEAAGQGRTQFHV*ANTALT
Trigger: GGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTGT...GCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp CATTCCCACCACCTCTCAGGGACTAACAGGTGCATGTGGACACTTGAACCACGACTCCGGTCCAACAAGTaGATTTTCAAACAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: HSHHLSGTNRCMWTLEPRLRSNK*IFKQPF
Trigger: GAAAGGCTGTTTGAAAATCAACTTGTTGGACCGGAG...TCGTGGTTCAAGTGTCCACATGCACCTGTTAGTCCCTGAGAGGTGGTGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp TATGGAGAGCCCACGCCCCACATAACCCTTGAGAACACAGTTCCATGTCTTGGCACTTCAAATAGTCCCTaGTATGCATCGGCCACAAAG +
Preference number: 5 (lower is better)
Translates to: YGEPTPHITLENTVPCLGTSNSP*YASATK
Trigger: CTTTGTGGCCGATGCATACAAGGGACTATTTGAAGT...GCCAAGACATGGAACTGTGTTCTCAAGGGTTATGTGGGGCGTGGGCTCTCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CCA 90 bp ATGGTTGTTTCTGCCACCAGGACAAAGTCTTCTGCAGGAGACAGCTaGACTCCATTCGGGAACCGCAGCTGGTCCAATAAAACTTTTACT +
Preference number: 5 (lower is better)
Translates to: MVVSATRTKSSAGDS*TPFGNRSWSNKTFT
Trigger: AGTAAAAGTTTTATTGGACCAGCTGCGGTTCCCGAATGGAGTCCAGCTGTCTCCTGCAGAAGACTTTGTCCTGGTGGCAGAAACAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTGTATCCTGGCCATGGTaGTTTCTGCCACCAGGACAA +
Preference number: 5 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPVSWPW*FLPPGQ
Trigger: TTGTCCTGGTGGCAGAAACAACCATGGCCAGGATAC...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp ACGTTATATATAGTAAAGAAGAACTTTGAGGCCGCAGGACAGGGCCGCAGCAGCGCAGTAGGTCCCGAATaGCAGAATCATCCAATTCCA +
Preference number: 5 (lower is better)
Translates to: TLYIVKKNFEAAGQGRSSAVGPE*QNHPIP
Trigger: TGGAATTGGATGATTCTGCAATTCGGGACCTACTGC...GCTGCTGCGGCCCTGTCCTGCGGCCTCAAAGTTCTTCTTTACTATATATAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 90 bp TGCTATGGACTCCGGTCCAACAAGTTGATTTTCAAACAGCCTTTCTaGCTGTCGCAGCTTCGTATTTGGATGCAGAACACCAAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: CYGLRSNKLIFKQPF*LSQLRIWMQNTKQE
Trigger: CTCTTGCTTGGTGTTCTGCATCCAAATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAAAATCAACTTGTTGGACCGGAGTCCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CCA 90 bp AAGTTGATTTTCAAACAGCCTTTCTGCCTGTCGCAGCTTCGTATTTaGATGCAGAACACCAAGCAAGAGCGGGGGTTCTTTGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: KLIFKQPFCLSQLRI*MQNTKQERGFFEAE
Trigger: CTCAGCTTCAAAGAACCCCCGCTCTTGCTTGGTGTTCTGCATCCAAATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAAAATCAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp CAGAATCATCCAATTCCAGCATGGTCAGCACGGAGATATTCACAGAAAGAAACCGTATCCTGGCCATGGTaGTTTCTGCCACCAGGACAA +
Preference number: 5 (lower is better)
Translates to: QNHPIPAWSARRYSQKETVSWPW*FLPPGQ
Trigger: TTGTCCTGGTGGCAGAAACAACCATGGCCAGGATAC...GGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp CAGAATCATCCAATTCCAGCATGGTCAGCACGGAGATATTCACAGAAAGAAACCACACAGTTCCATGTCTaGGCTAACACGGCTCTCACC +
Preference number: 5 (lower is better)
Translates to: QNHPIPAWSARRYSQKETTQFHV*ANTALT
Trigger: GGTGAGAGCCGTGTTAGCCAAGACATGGAACTGTGT...GGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACGTCGCAGCTTCGTATTaGGATGCAGAACACCAAGCA +
Preference number: 5 (lower is better)
Translates to: VHILGSRGQEQRSQTRRYVAASY*DAEHQA
Trigger: TGCTTGGTGTTCTGCATCCAAATACGAAGCTGCGAC...GTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTCAGGTAGTCTCGTCTTaGCCATTTGCTGCTAGAATC +
Preference number: 5 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPQVVSS*PFAARI
Trigger: GATTCTAGCAGCAAATGGCAAAGACGAGACTACCTG...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp AAACCCAGCAAAGTCCTCTCTGAGCCGCTAGAGTCAACAAGCTTTTCATACACATGCACTGTTCACATCTaGGGGTCTAGAGGTCAAGAA +
Preference number: 5 (lower is better)
Translates to: KPSKVLSEPLESTSFSYTCTVHI*GSRGQE
Trigger: TTCTTGACCTCTAGACCCCAAGATGTGAACAGTGCA...TGTGTATGAAAAGCTTGTTGACTCTAGCGGCTCAGAGAGGACTTTGCTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS TCA 90 bp AACATCACATCCCCAATATGTGCTATGGACTCCGGTCCAACAAGTTaGTTTTCAAACAGCCTTTCTGCCTGTCGCAGCTTCGTATTTGGA +
Preference number: 5 (lower is better)
Translates to: NITSPICAMDSGPTS*FSNSLSACRSFVFG
Trigger: TCCAAATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAAAATCAACTTGTTGGACCGGAGTCCATAGCACATATTGGGGATGTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTCAGGTAGTCTCGTCTTaGCCATTTGCTGCTAGAATC +
Preference number: 5 (lower is better)
Translates to: TVHILGSRGQEQRSQTRRQVVSS*PFAARI
Trigger: GATTCTAGCAGCAAATGGCAAAGACGAGACTACCTG...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp ACTGTTCACATCTTGGGGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTACTTCAAATAGTCCCTaGTATGCATCGGCCACAAAG +
Preference number: 5 (lower is better)
Translates to: TVHILGSRGQEQRSQTRRTSNSP*YASATK
Trigger: CTTTGTGGCCGATGCATACAAGGGACTATTTGAAGT...ACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACCCCAAGATGTGAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp GGTCTAGAGGTCAAGAACAAAGATCACAGACAAGACGTTACTAAACGGACCCCTAAAATATACAGCAACTaGGGGCTTATAACACATGAG +
Preference number: 5 (lower is better)
Translates to: GLEVKNKDHRQDVTKRTPKIYSN*GLITHE
Trigger: CTCATGTGTTATAAGCCCCAAGTTGCTGTATATTTT...AGGGGTCCGTTTAGTAACGTCTTGTCTGTGATCTTTGTTCTTGACCTCTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp AACGAAGAAAGGTATGACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCTCTCGTCTTTGCCATTaGCTGCTAGAATCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: NEERYDRTLYIVKKNFEASRLCH*LLESVK
Trigger: TTTCACCGATTCTAGCAGCAAATGGCAAAGACGAGA...GGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTCATACCTTTCTTCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp CAGAATCATCCAATTCCAGCATGGTCAGCACGGAGATATTCACAGAAAGAAACCCTTCATCACCGTCTCTaGACTAAAGAGCTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: QNHPIPAWSARRYSQKETLHHRL*TKELKN
Trigger: ATTTTTAAGCTCTTTAGTCAAGAGACGGTGATGAAG...GGTTTCTTTCTGTGAATATCTCCGTGCTGACCATGCTGGAATTGGATGATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS-3UTR CAA 90 bp GTAGACATACTTGTGAAAATATACAGCAACTTGGGGCTTATAACACATGAGCAATGCACTGTTCACATCTaGGGGTCTAGAGGTCAAGAA +
Preference number: 5 (lower is better)
Translates to: VDILVKIYSNLGLITHEQCTVHI*GSRGQE
Trigger: TTCTTGACCTCTAGACCCCAAGATGTGAACAGTGCA...TTGCTCATGTGTTATAAGCCCCAAGTTGCTGTATATTTTCACAAGTATGTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS-3UTR CAA 90 bp AACGAAGAAAGGTATGACCGCACGTTATATATAGTAAAGAAGAACTTTGAGGCCCTTCATCACCGTCTCTaGACTAAAGAGCAGATCACA +
Preference number: 5 (lower is better)
Translates to: NEERYDRTLYIVKKNFEALHHRL*TKEQIT
Trigger: TGTGATCTGCTCTTTAGTCAAGAGACGGTGATGAAG...GGCCTCAAAGTTCTTCTTTACTATATATAACGTGCGGTCATACCTTTCTTCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451442.5
CDS-3UTR CAA 90 bp GTAGACATACTTGTGAAAATATACAGCAACTTGGGGCTTATAACACATGAGCAAAAAATATACAGCAACTaGGGGCTTATAACACATGAG +
Preference number: 5 (lower is better)
Translates to: VDILVKIYSNLGLITHEQKIYSN*GLITHE
Trigger: CTCATGTGTTATAAGCCCCAAGTTGCTGTATATTTT...TTGCTCATGTGTTATAAGCCCCAAGTTGCTGTATATTTTCACAAGTATGTCTAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 72 bp GCCTCCGGGGCCTGGCCATCATCGTCTGTGACGACCTaGGGCCGCAGGGGCCGGCGCTGTCGCAGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: ASGAWPSSSVTT*GRRGRRCRSPS
Trigger: GGACGGGCTGCGACAGCGCCGGCCCCTGCGGCCGCAGGTCGTCACAGACGATGATGGCCAGGCCCCGGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS CCA 72 bp GGGGCCGGCGCTGTCGCAGCCCGTCCGCCTCGCTCATaGTACGGGCGCCAGCCTCACCCGCAGAAACCACCT +
Preference number: 6 (lower is better)
Translates to: GAGAVAARPPRS*YGRQPHPQKPP
Trigger: AGGTGGTTTCTGCGGGTGAGGCTGGCGCCCGTACCATGAGCGAGGCGGACGGGCTGCGACAGCGCCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS CCA 72 bp CCGCTAAAGGAGCTGCCGTCCTTAGCCTCCGGGGCCTaGCCATCATCGTCTGTGACGACCTGCGGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: PLKELPSLASGA*PSSSVTTCGRR
Trigger: CCTGCGGCCGCAGGTCGTCACAGACGATGATGGCCAGGCCCCGGAGGCTAAGGACGGCAGCTCCTTTAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217456.3
CDS CCA 72 bp GGCCTGGTGCCTGAGTGTGAAGACTCCTGGCCTGCGTaGCAGGGGCAGCTATCTGGGAGGGCTAAACAGCCT +
Preference number: 6 (lower is better)
Translates to: GLVPECEDSWPA*QGQLSGRAKQP
Trigger: AGGCTGTTTAGCCCTCCCAGATAGCTGCCCCTGCCACGCAGGCCAGGAGTCTTCACACTCAGGCACCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS TCA 72 bp CCAGGTACAGGTGCCCATCGTGTTCGTGCACCTCGCTaGTGTAGGTGGCCACCAGCCCATCGGGATCATGCA +
Preference number: 6 (lower is better)
Translates to: PGTGAHRVRAPR*CRWPPAHRDHA
Trigger: TGCATGATCCCGATGGGCTGGTGGCCACCTACATCAGCGAGGTGCACGAACACGATGGGCACCTGTACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 72 bp GTATGCATCGGCCACAAAGAGAGTCCCATTGGGCCCTaGACGGATACCCAGGGGTCTCCCACACACAGGCTC +
Preference number: 6 (lower is better)
Translates to: VCIGHKESPIGP*TDTQGSPTHRL
Trigger: GAGCCTGTGTGTGGGAGACCCCTGGGTATCCGTGCAGGGCCCAATGGGACTCTCTTTGTGGCCGATGCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS TCA 72 bp GATCATGCAGGCTTCTCCGGAAGGCACCGCTGTCGCTaGGTTCTAGGACGAGGCTGTACCGCGGCACAAACT +
Preference number: 6 (lower is better)
Translates to: DHAGFSGRHRCR*VLGRGCTAAQT
Trigger: AGTTTGTGCCGCGGTACAGCCTCGTCCTAGAACTCAGCGACAGCGGTGCCTTCCGGAGAAGCCTGCATGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 72 bp AGTCCCTTGTATGCATCGGCCACAAAGAGAGTCCCATaGGGCCCTGCACGGATACCCAGGGGTCTCCCACAC +
Preference number: 6 (lower is better)
Translates to: SPLYASATKRVP*GPARIPRGLPH
Trigger: GTGTGGGAGACCCCTGGGTATCCGTGCAGGGCCCAATGGGACTCTCTTTGTGGCCGATGCATACAAGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 72 bp GGCCATGGTTGTTTCTGCCACCAGGACAAAGTCTTCTaGAGGAGACAGCTGGACTCCATTCGGGAACCGCAG +
Preference number: 6 (lower is better)
Translates to: GHGCFCHQDKVF*RRQLDSIREPQ
Trigger: CTGCGGTTCCCGAATGGAGTCCAGCTGTCTCCTGCAGAAGACTTTGTCCTGGTGGCAGAAACAACCATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 90 bp ACTTCAAATAGTCCCTTGTATGCATCGGCCACAAAGAGAGTCCCATaGGGCCCTGCACGGATACCCAGGGGTCTCCCACACACAGGCTCA +
Preference number: 6 (lower is better)
Translates to: TSNSPLYASATKRVP*GPARIPRGLPHTGS
Trigger: TGAGCCTGTGTGTGGGAGACCCCTGGGTATCCGTGCAGGGCCCAATGGGACTCTCTTTGTGGCCGATGCATACAAGGGACTATTTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 72 bp TCACAGTATCATACTCCAGCAGGCGCCCGTCATCTGTaGCCTCCATCACCAGAAGCAGGTAGTCTCGTCTTT +
Preference number: 6 (lower is better)
Translates to: SQYHTPAGARHL*PPSPEAGSLVF
Trigger: AAAGACGAGACTACCTGCTTCTGGTGATGGAGGGCACAGATGACGGGCGCCTGCTGGAGTATGATACTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CCA 72 bp TCTGCCACCAGGACAAAGTCTTCTGCAGGAGACAGCTaGACTCCATTCGGGAACCGCAGCTGGTCCAATAAA +
Preference number: 6 (lower is better)
Translates to: SATRTKSSAGDS*TPFGNRSWSNK
Trigger: TTTATTGGACCAGCTGCGGTTCCCGAATGGAGTCCAGCTGTCTCCTGCAGAAGACTTTGTCCTGGTGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 72 bp GAGGCTGTACCGCGGCACAAACTTCATCACCGTCTCTaGACTAAAGAGCAGATCACAACCAGCGCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: EAVPRHKLHHRL*TKEQITTSAAS
Trigger: GGAAGCTGCGCTGGTTGTGATCTGCTCTTTAGTCAAGAGACGGTGATGAAGTTTGTGCCGCGGTACAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451442.5
CDS CAA 72 bp GGCCAGAAACGTAGACTCTTCGTATCCTGGCCATGGTaGTTTCTGCCACCAGGACAAAGTCTTCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GQKRRLFVSWPW*FLPPGQSLLQE
Trigger: CTCCTGCAGAAGACTTTGTCCTGGTGGCAGAAACAACCATGGCCAGGATACGAAGAGTCTACGTTTCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 72 bp AACAGCCTTTCTGCCTGTCGCAGCTTCGTATTTGGATaGAGAACACCAAGCAAGAGCGGGGGTTCTTTGAAG +
Preference number: 6 (lower is better)
Translates to: NSLSACRSFVFG*RTPSKSGGSLK
Trigger: CTTCAAAGAACCCCCGCTCTTGCTTGGTGTTCTGCATCCAAATACGAAGCTGCGACAGGCAGAAAGGCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 72 bp AACGTAGACTCTTCGTATCCTGGCCATGGTTGTTTCTaGCACCAGGACAAAGTCTTCTGCAGGAGACAGCTG +
Preference number: 6 (lower is better)
Translates to: NVDSSYPGHGCF*HQDKVFCRRQL
Trigger: CAGCTGTCTCCTGCAGAAGACTTTGTCCTGGTGGCAGAAACAACCATGGCCAGGATACGAAGAGTCTACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CCA 72 bp GGAACCGCAGCTGGTCCAATAAAACTTTTACTTCCCTaGTCACAGTATCATACTCCAGCAGGCGCCCGTCAT +
Preference number: 6 (lower is better)
Translates to: GTAAGPIKLLLP*SQYHTPAGARH
Trigger: ATGACGGGCGCCTGCTGGAGTATGATACTGTGACCAGGGAAGTAAAAGTTTTATTGGACCAGCTGCGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CCA 72 bp TCAGGCCAGAAACGTAGACTCTTCGTATCCTGGCCATaGTTGTTTCTGCCACCAGGACAAAGTCTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SGQKRRLFVSWP*LFLPPGQSLLQ
Trigger: CTGCAGAAGACTTTGTCCTGGTGGCAGAAACAACCATGGCCAGGATACGAAGAGTCTACGTTTCTGGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 90 bp AGCAGTTTCACTTCACGTTTCCAGGGATTTACTTCAAATAGTCCCTaGTATGCATCGGCCACAAAGAGAGTCCCATTGGGCCCTGCACGG +
Preference number: 6 (lower is better)
Translates to: SSFTSRFQGFTSNSP*YASATKRVPLGPAR
Trigger: CCGTGCAGGGCCCAATGGGACTCTCTTTGTGGCCGATGCATACAAGGGACTATTTGAAGTAAATCCCTGGAAACGTGAAGTGAAACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 90 bp CCCGTCATCTGTGCCCTCCATCACCAGAAGCAGGTAGTCTCGTCTTaGCCATTTGCTGCTAGAATCGGTGAAATAAATCTTCCTCCCATC +
Preference number: 6 (lower is better)
Translates to: PVICALHHQKQVVSS*PFAARIGEINLPPI
Trigger: GATGGGAGGAAGATTTATTTCACCGATTCTAGCAGCAAATGGCAAAGACGAGACTACCTGCTTCTGGTGATGGAGGGCACAGATGACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CCA 72 bp TTCAAACAGCCTTTCTGCCTGTCGCAGCTTCGTATTTaGATGCAGAACACCAAGCAAGAGCGGGGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: FKQPFCLSQLRI*MQNTKQERGFF
Trigger: AAAGAACCCCCGCTCTTGCTTGGTGTTCTGCATCCAAATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 72 bp TTTCAAACAGCCTTTCTGCCTGTCGCAGCTTCGTATTaGGATGCAGAACACCAAGCAAGAGCGGGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: FQTAFLPVAASY*DAEHQARAGVL
Trigger: AAGAACCCCCGCTCTTGCTTGGTGTTCTGCATCCAAATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS TCA 72 bp TCCCCAATATGTGCTATGGACTCCGGTCCAACAAGTTaGTTTTCAAACAGCCTTTCTGCCTGTCGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SPICAMDSGPTS*FSNSLSACRSF
Trigger: GAAGCTGCGACAGGCAGAAAGGCTGTTTGAAAATCAACTTGTTGGACCGGAGTCCATAGCACATATTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS GCA 72 bp CTCCGGTCCAACAAGTTGATTTTCAAACAGCCTTTCTaGCTGTCGCAGCTTCGTATTTGGATGCAGAACACC +
Preference number: 6 (lower is better)
Translates to: LRSNKLIFKQPF*LSQLRIWMQNT
Trigger: GGTGTTCTGCATCCAAATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAAAATCAACTTGTTGGACCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 72 bp ACTTCACGTTTCCAGGGATTTACTTCAAATAGTCCCTaGTATGCATCGGCCACAAAGAGAGTCCCATTGGGC +
Preference number: 6 (lower is better)
Translates to: TSRFQGFTSNSP*YASATKRVPLG
Trigger: GCCCAATGGGACTCTCTTTGTGGCCGATGCATACAAGGGACTATTTGAAGTAAATCCCTGGAAACGTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 90 bp AAACATCACATCCCCAATATGTGCTATGGACTCCGGTCCAACAAGTaGATTTTCAAACAGCCTTTCTGCCTGTCGCAGCTTCGTATTTGG +
Preference number: 6 (lower is better)
Translates to: KHHIPNMCYGLRSNK*IFKQPFCLSQLRIW
Trigger: CCAAATACGAAGCTGCGACAGGCAGAAAGGCTGTTTGAAAATCAACTTGTTGGACCGGAGTCCATAGCACATATTGGGGATGTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5
CDS CAA 72 bp TGTGCCCTCCATCACCAGAAGCAGGTAGTCTCGTCTTaGCCATTTGCTGCTAGAATCGGTGAAATAAATCTT +
Preference number: 6 (lower is better)
Translates to: CALHHQKQVVSS*PFAARIGEINL
Trigger: AAGATTTATTTCACCGATTCTAGCAGCAAATGGCAAAGACGAGACTACCTGCTTCTGGTGATGGAGGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217456.3
ENST00000451442.5