RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APEX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100823

Ensembl transcript IDs: ENST00000216714.8, ENST00000398030.8, ENST00000438886.1, ENST00000553368.1, ENST00000553555.5, ENST00000553681.5, ENST00000554325.1, ENST00000554813.5, ENST00000555306.5, ENST00000555414.5, ENST00000555839.5, ENST00000556054.5, ENST00000556296.1, ENST00000557054.1, ENST00000557150.5, ENST00000557159.5, ENST00000557181.5, ENST00000557344.5, ENST00000557365.1, ENST00000557592.5

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAGTGGGACAACAAAAAGTAATCAAGGCGCCAACCAACATTCTTaGATCGAGCATTCATCATATAAGTCCAAAAGGTGTAGGCATAGG +
Preference number: 1 (lower is better)
Translates to: ESGTTKSNQGANQHS*IEHSSYKSKRCRHR
Trigger: CCTATGCCTACACCTTTTGGACTTATATGATGAATGCTCGATCCAAGAATGTTGGTTGGCGCCTTGATTACTTTTTGTTGTCCCACTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR-3UTR CCA 90 bp CAGAGAGTGGGACAACAAAAAGTAATCAAGGCGCCAACCAACATTCTTGGATCGGCCTTGGCGCTCTTGTaGCGTGAAGCCAGCATTCTT +
Preference number: 2 (lower is better)
Translates to: QRVGQQKVIKAPTNILGSALALL*REASIL
Trigger: AAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGC...CGATCCAAGAATGTTGGTTGGCGCCTTGATTACTTTTTGTTGTCCCACTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR-3UTR TCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACAAGGTTTGCCACTGGGTaGGGTTTTCTGATCTGGGGG +
Preference number: 2 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTRFATG*GFLIWG
Trigger: CCCCCAGATCAGAAAACCTCACCCAGTGGCAAACCT...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554325.1
3UTR-3UTR TCA 90 bp CAGAGAGTGGGACAACAAAAAGTAATCAAGGCGCCAACCAACATTCTTGGATCGGGCGCTCTTGTGGCGTaGAGCCAGCATTCTTTTTGT +
Preference number: 2 (lower is better)
Translates to: QRVGQQKVIKAPTNILGSGALVA*SQHSFC
Trigger: ACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCC...CGATCCAAGAATGTTGGTTGGCGCCTTGATTACTTTTTGTTGTCCCACTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR-3UTR GCA 90 bp TGCAGTAATTCCCCGAAGCCTTGGCGCTCTTGTGGCGTGAAGCCAGCATTCTTTGTCAATTTCTTCATGTaGCACATTGAGGTCTCCACA +
Preference number: 2 (lower is better)
Translates to: CSNSPKPWRSCGVKPAFFVNFFM*HIEVST
Trigger: TGTGGAGACCTCAATGTGGCACATGAAGAAATTGAC...AAAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTCGGGGAATTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR-3UTR TCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACATCCAAGAGCAGATCTTaGGTGTGGCAGGTTTGCCAC +
Preference number: 2 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTSKSRS*VWQVCH
Trigger: GTGGCAAACCTGCCACACTCAAGATCTGCTCTTGGA...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
3UTR-3UTR GCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACAGGCTGGGCCCTCTCCTaGTGCCTCTTTGTCATTTTT +
Preference number: 2 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTGWALS*CLFVIF
Trigger: AAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAGCC...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
3UTR-3UTR CCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACATGGCAGGTTTGCCACTaGGTGAGGTTTTCTGATCTG +
Preference number: 2 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTWQVCH*VRFSDL
Trigger: CAGATCAGAAAACCTCACCCAGTGGCAAACCTGCCA...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554325.1
3UTR-3UTR TCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACCTTCATGTGCCACATTaGGGTCTCCACACAGCACAA +
Preference number: 2 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYLHVPH*GLHTAQ
Trigger: TTGTGCTGTGTGGAGACCTCAATGTGGCACATGAAG...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR-3UTR GCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACATGGGCCCTCTCCTGCTaGCTCTTTGTCATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTWALSC*LFVIFL
Trigger: AAGAAAAATGACAAAGAGGCAGCAGGAGAGGGCCCA...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554325.1
3UTR-3UTR GCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTGTTCCCCTTGGGGTTaGGAAGGTCAATTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSCSPWG*EGQFLH
Trigger: ATGAAGAAATTGACCTTCGCAACCCCAAGGGGAACA...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR-3UTR CCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGGCCAACCAACATTCTTaGATCGAGCATTCATCATAT +
Preference number: 2 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEANQHS*IEHSSY
Trigger: ATATGATGAATGCTCGATCCAAGAATGTTGGTTGGC...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR-3UTR TCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGGAATGCAGATTTCTCTaGAGAGTGTTTAAAGAAGGA +
Preference number: 2 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEECRFL*RVFKEG
Trigger: TCCTTCTTTAAACACTCTTCAGAGAAATCTGCATTC...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
3UTR-3UTR TCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGGAATGCAGATTTCTCTaGAGAGTGTTTAAAGAAGGA +
Preference number: 2 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMECRFL*RVFKEG
Trigger: TCCTTCTTTAAACACTCTTCAGAGAAATCTGCATTC...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
3UTR CCA 72 bp GCCAGTGGCACAGCCTGCAGTAATTCCCCGAAGCCTTaGCGCTCTTGTGGCGTGAAGCCAGCATTCTTTTTG +
Preference number: 3 (lower is better)
Translates to: ASGTACSNSPKP*RSCGVKPAFFL
Trigger: CAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTCGGGGAATTACTGCAGGCTGTGCCACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR TCA 72 bp TGGTGTCACAGTGCTAGGTATAGGGTGATAGGACAGTaGTCACTGCCGAGGGCCTTGGAACGGATCTTGCTG +
Preference number: 3 (lower is better)
Translates to: WCHSARYRVIGQ*SLPRALERILL
Trigger: CAGCAAGATCCGTTCCAAGGCCCTCGGCAGTGATCACTGTCCTATCACCCTATACCTAGCACTGTGACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR TCA 72 bp ATGGTAGTTGAGGGGGCTTATTTCCCAGGCTCAAAGTaGTTTAGGGGTGGTGTCACAGTGCTAGGTATAGGG +
Preference number: 3 (lower is better)
Translates to: MVVEGAYFPGSK*FRGGVTVLGIG
Trigger: CCCTATACCTAGCACTGTGACACCACCCCTAAATCACTTTGAGCCTGGGAAATAAGCCCCCTCAACTACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR-3UTR CAA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACATTGAGTGTGGCAGGTTaGCCACTGGGTGAGGTTTTC +
Preference number: 3 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTLSVAG*PLGEVF
Trigger: GAAAACCTCACCCAGTGGCAAACCTGCCACACTCAA...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554325.1
3UTR-3UTR CAA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACTCTTCATGTGCCACATaGAGGTCTCCACACAGCACA +
Preference number: 3 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYSSCAT*RSPHST
Trigger: TGTGCTGTGTGGAGACCTCAATGTGGCACATGAAGA...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557054.1
3UTR CCA 72 bp ACAACAAAAAGTAATCAAGGCGCCAACCAACATTCTTaGATCGAGCATTCATCATATAAGTCCAAAAGGTGT +
Preference number: 3 (lower is better)
Translates to: TTKSNQGANQHS*IEHSSYKSKRC
Trigger: ACACCTTTTGGACTTATATGATGAATGCTCGATCCAAGAATGTTGGTTGGCGCCTTGATTACTTTTTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR GCA 90 bp CCCGAAGCCTTGGCGCTCTTGTGGCGTGAAGCCAGCATTCTTTTTGTTCCCCTTGTCCTGACTCAAGCTTaGCGTTCAGACTGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PEALALLWREASILFVPLVLTQA*RSDCQR
Trigger: TCGCTGGCAGTCTGAACGGCAAGCTTGAGTCAGGAC...AAGGGGAACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR CCA 90 bp AGTCCAAAAGGTGTAGGCATAGGGTGTGTTGGGGTAGAGGTGCCTAAAGCTGTCCGTTACGAACGCCCTTaGGCAGCTGTACCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: SPKGVGIGCVGVEVPKAVRYERP*AAVPRH
Trigger: GTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACG...GACAGCTTTAGGCACCTCTACCCCAACACACCCTATGCCTACACCTTTTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR GCA 90 bp CCCGAAGCCTTGGCGCTCTTGTGGCGTGAAGCCAGCATTCTTTTTGTTCCCCTTGGCCCTTCAGGAACTTaGGAAAGGCGCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PEALALLWREASILFVPLGPSGT*ERRSLF
Trigger: AAAAAGGGAGCGCCTTTCGCAAGTTCCTGAAGGGCC...AAGGGGAACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR TCA 90 bp CCCGAAGCCTTGGCGCTCTTGTGGCGTGAAGCCAGCATTCTTTTTGTTCCCCTTTTCCCAGGCTCAAAGTaGTTTAGGGGTGGTGTCACA +
Preference number: 4 (lower is better)
Translates to: PEALALLWREASILFVPLFPGSK*FRGGVT
Trigger: TGTGACACCACCCCTAAATCACTTTGAGCCTGGGAA...AAGGGGAACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR TCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTAAGAAGGGTGCACGCTaGGCCCCCACGTGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSKKGAR*APTWVA
Trigger: CGCTACCCACGTGGGGGCTCAGCGTGCACCCTTCTT...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555414.5
CDS-3UTR GCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACAGAGCAACCCCGTATCTaGACCGGCCCGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTEQPRI*TGPMAA
Trigger: GGCTGCCATCGGGCCGGTGCAGATACGGGGTTGCTC...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR GCA 90 bp TGCTGTCACACAATGCAGGTAACAGAGAGTGGGACAACAAAAAGTAATCAAGGCGAGCAACCCCGTATCTaGACCGGCCCGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CCHTMQVTESGTTKSNQGEQPRI*TGPMAA
Trigger: GGCTGCCATCGGGCCGGTGCAGATACGGGGTTGCTC...GCCTTGATTACTTTTTGTTGTCCCACTCTCTGTTACCTGCATTGTGTGACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR GCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTGAGCAACCCCGTATCTaGACCGGCCCGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPEQPRI*TGPMAA
Trigger: GGCTGCCATCGGGCCGGTGCAGATACGGGGTTGCTC...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTACCTCTGGCTCTGTCCTaGGCTCATCCCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: KILGLKELYHRSLVGGFLPLALS*AHPRLP
Trigger: CGGAAGACGGGGATGAGCTCAGGACAGAGCCAGAGG...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGAGCAACCCCGTATCTaGACCGGCCCGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKEQPRI*TGPMAA
Trigger: GGCTGCCATCGGGCCGGTGCAGATACGGGGTTGCTC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTGCTTCATCCCAGCGCTaGCGGTACTCCAGTCGTACC +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSASSQR*RYSSRT
Trigger: GGTACGACTGGAGTACCGGCAGCGCTGGGATGAAGC...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp CCCGAAGCCTTGGCGCTCTTGTGGCGTGAAGCCAGCATTCTTTTTGTTCCCCTTTGTTCCCCTTGGGGTTaGGAAGGTCAATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PEALALLWREASILFVPLCSPWG*EGQFLH
Trigger: ATGAAGAAATTGACCTTCGCAACCCCAAGGGGAACA...AAGGGGAACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR CCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTCGTTACGAACGCCCTTaGGCAGCTGTACCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSRYERP*AAVPRH
Trigger: GTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACG...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACACGTTACGAACGCCCTTaGGCAGCTGTACCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTRYERP*AAVPRH
Trigger: GTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACG...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR CCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTACTTTGAGTGGGCACTaGCGGGAAAGCAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFTLSGH*RESRPT
Trigger: CGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGT...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
3UTR CAA 72 bp TTGGGGTTGCGAAGGTCAATTTCTTCATGTGCCACATaGAGGTCTCCACACAGCACAAGGGGCTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: LGLRRSISSCAT*RSPHSTRGFRE
Trigger: TTCCCGAAAGCCCCTTGTGCTGTGTGGAGACCTCAATGTGGCACATGAAGAAATTGACCTTCGCAACCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR TCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATCACCCGGCCTTCCTaGTCATGCTCCTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFITRPS*SCSSSP
Trigger: AGGCGATGAGGAGCATGATCAGGAAGGCCGGGTGAT...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTAGGGTGATAGGACAGTaGTCACTGCCGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSRVIGQ*SLPRAL
Trigger: CAAGGCCCTCGGCAGTGATCACTGTCCTATCACCCT...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACACGTACATCAAGGGAATaGCAAACACCCCCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTRTSRE*QTPPPQ
Trigger: CTGCGGCGGGGGTGTTTGTCATTCCCTTGATGTACG...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR TCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACATTCCCTTACCTGTCCTaGGCTCATCCCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTFPYLS*AHPRLP
Trigger: CGGAAGACGGGGATGAGCTCAGGACAGGTAAGGGAA...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR GCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGCTTCATCCCAGCGCTaGCGGTACTCCAGTCGTACC +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYASSQR*RYSSRT
Trigger: GGTACGACTGGAGTACCGGCAGCGCTGGGATGAAGC...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp TGCTGTCACACAATGCAGGTAACAGAGAGTGGGACAACAAAAAGTAATCAAGGCGCCAGTGGCACAGCCTaGAGTAATTCCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: CCHTMQVTESGTTKSNQGASGTA*SNSPKP
Trigger: AGGCTTCGGGGAATTACTGCAGGCTGTGCCACTGGC...GCCTTGATTACTTTTTGTTGTCCCACTCTCTGTTACCTGCATTGTGTGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR GCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGAGCACAAAGAAGGGTaGACGCTGAGCCCCCACGTG +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYEHKEG*TLSPHV
Trigger: CACGTGGGGGCTCAGCGTGCACCCTTCTTTGTGCTC...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555414.5
CDS-3UTR GCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTCGCGTTGCTCAAGCTTaGCGTTCAGACTGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFRVAQA*RSDCQR
Trigger: TCGCTGGCAGTCTGAACGGCAAGCTTGAGCAACGCG...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555414.5
CDS-3UTR CCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGTTACGAACGCCCTTaGGCAGCTGTACCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIRYERP*AAVPRH
Trigger: GTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACG...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATAACTTTGAGTGGGCACTaGCGGGAAAGCAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFITLSGH*RESRPT
Trigger: CGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGT...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGCCTCTGGCTCTGTCCTaGGCTCATCCCCGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMPLALS*AHPRLP
Trigger: CGGAAGACGGGGATGAGCTCAGGACAGAGCCAGAGG...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATAATCACCCGGCCTTCCTaGTCATGCTCCTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIITRPS*SCSSSP
Trigger: AGGCGATGAGGAGCATGATCAGGAAGGCCGGGTGAT...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATCACCCGGCCTTCCTaGTCATGCTCCTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYITRPS*SCSSSP
Trigger: AGGCGATGAGGAGCATGATCAGGAAGGCCGGGTGAT...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAAGGGTGATAGGACAGTaGTCACTGCCGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KILGLKELYHRSLVGGFLRVIGQ*SLPRAL
Trigger: CAAGGCCCTCGGCAGTGATCACTGTCCTATCACCCT...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTGCTTGCCGTTCAGACTaGCAGCGAAGCCCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSACRSD*QRSPSY
Trigger: ATAAGAGGGGCTTCGCTGGCAGTCTGAACGGCAAGC...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACAGTCCTGACTCAAGCTTaGCGTTCAGACTGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTVLTQA*RSDCQR
Trigger: TCGCTGGCAGTCTGAACGGCAAGCTTGAGTCAGGAC...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR GCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGCTTCATCCCAGCGCTaGCGGTACTCCAGTCGTACC +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKASSQR*RYSSRT
Trigger: GGTACGACTGGAGTACCGGCAGCGCTGGGATGAAGC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTGCCAGTGGCACAGCCTaGAGTAATTCCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPASGTA*SNSPKP
Trigger: AGGCTTCGGGGAATTACTGCAGGCTGTGCCACTGGC...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTCGTTGCCGTTCAGACTaGCAGCGAAGCCCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFRCRSD*QRSPSY
Trigger: ATAAGAGGGGCTTCGCTGGCAGTCTGAACGGCAACG...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398030.8
CDS-3UTR CCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAACGTTACGAACGCCCTTaGGCAGCTGTACCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKRYERP*AAVPRH
Trigger: GTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACG...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACACTGCCGAGGGCCTTaGAACGGATCTTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIHCRGP*NGSCCH
Trigger: GTGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTG...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTACACTGCCGAGGGCCTTaGAACGGATCTTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KILGLKELYHRSLVGGFLHCRGP*NGSCCH
Trigger: GTGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTG...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATAAGGTTTGCCACTGGGTaGGGTTTTCTGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIRFATG*GFLIWG
Trigger: CCCCCAGATCAGAAAACCTCACCCAGTGGCAAACCT...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTTCCAAGAGCAGATCTTaGGTGTGGCAGGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFSKSRS*VWQVCH
Trigger: GTGGCAAACCTGCCACACTCAAGATCTGCTCTTGGA...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTAGTCCAGGCAGCTCCTaGAGTTCAGCTGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFSPGSS*SSAGSL
Trigger: CAAACTACCAGCTGAACTTCAGGAGCTGCCTGGACT...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTAGTCCAGGCAGCTCCTaGAGTTCAGCTGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSSPGSS*SSAGSL
Trigger: CAAACTACCAGCTGAACTTCAGGAGCTGCCTGGACT...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTTGCCGTAAGAAACTTTaGGTGGGCACTGGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFCRKKL*VGTGGK
Trigger: TTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCA...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTGGCGCTCTTGTGGCGTaGAGCCAGCATTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSGALVA*SQHSFC
Trigger: ACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCC...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAGGGTGATAGGACAGTaGTCACTGCCGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHERVIGQ*SLPRAL
Trigger: CAAGGCCCTCGGCAGTGATCACTGTCCTATCACCCT...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGCCAGTGGCACAGCCTaGAGTAATTCCCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKASGTA*SNSPKP
Trigger: AGGCTTCGGGGAATTACTGCAGGCTGTGCCACTGGC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGACTTTGAGTGGGCACTaGCGGGAAAGCAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMTLSGH*RESRPT
Trigger: CGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGT...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGCCTTGGCGCTCTTGTaGCGTGAAGCCAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYALALL*REASIL
Trigger: AAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGC...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACAATTCCCCGAAGCCTTaGCGCTCTTGTGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYNSPKP*RSCGVK
Trigger: CTTCACGCCACAAGAGCGCCAAGGCTTCGGGGAATT...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAATTCCCCGAAGCCTTaGCGCTCTTGTGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPNSPKP*RSCGVK
Trigger: CTTCACGCCACAAGAGCGCCAAGGCTTCGGGGAATT...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGCACTGCCGAGGGCCTTaGAACGGATCTTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEHCRGP*NGSCCH
Trigger: GTGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTG...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTATGCCGTAAGAAACTTTaGGTGGGCACTGGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: KILGLKELYHRSLVGGFLCRKKL*VGTGGK
Trigger: TTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCA...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACTGCCGTAAGAAACTTTaGGTGGGCACTGGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYCRKKL*VGTGGK
Trigger: TTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCA...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp GGCGCCAACCAACATTCTTGGATCGAGCATTCATCATATAAGTCCAAAAGGTGTCTTCATGTGCCACATTaGGGTCTCCACACAGCACAA +
Preference number: 4 (lower is better)
Translates to: GANQHSWIEHSSYKSKRCLHVPH*GLHTAQ
Trigger: TTGTGCTGTGTGGAGACCTCAATGTGGCACATGAAG...ACACCTTTTGGACTTATATGATGAATGCTCGATCCAAGAATGTTGGTTGGCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR TCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGGCGCTCTTGTGGCGTaGAGCCAGCATTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYGALVA*SQHSFC
Trigger: ACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCC...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTCCCAGGCTCAAAGTaGTTTAGGGGTGGTGTCACA +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSFPGSK*FRGGVT
Trigger: TGTGACACCACCCCTAAATCACTTTGAGCCTGGGAA...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGTCCTGACTCAAGCTTaGCGTTCAGACTGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKVLTQA*RSDCQR
Trigger: TCGCTGGCAGTCTGAACGGCAAGCTTGAGTCAGGAC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216714.8
ENST00000557054.1
CDS-3UTR GCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATAGGCTGGGCCCTCTCCTaGTGCCTCTTTGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIGWALS*CLFVIF
Trigger: AAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAGCC...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGGCCTTGGCGCTCTTGTaGCGTGAAGCCAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEALALL*REASIL
Trigger: AAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGC...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGCCTTGGCGCTCTTGTaGCGTGAAGCCAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKALALL*REASIL
Trigger: AAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAAATTCCCCGAAGCCTTaGCGCTCTTGTGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKNSPKP*RSCGVK
Trigger: CTTCACGCCACAAGAGCGCCAAGGCTTCGGGGAATT...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGCACTGCCGAGGGCCTTaGAACGGATCTTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMHCRGP*NGSCCH
Trigger: GTGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTG...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACACCGTCTTACTCTTCTTaGCCTCTGGCTCGTACATCA +
Preference number: 4 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTPSYSS*PLARTS
Trigger: TGATGTACGAGCCAGAGGCCAAGAAGAGTAAGACGG...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR TCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGGTTTGCCACTGGGTaGGGTTTTCTGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMRFATG*GFLIWG
Trigger: CCCCCAGATCAGAAAACCTCACCCAGTGGCAAACCT...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAATCCAAGAGCAGATCTTaGGTGTGGCAGGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKSKSRS*VWQVCH
Trigger: GTGGCAAACCTGCCACACTCAAGATCTGCTCTTGGA...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACTTGTCCGAAGGAGCTaGCCAGTATTGATGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFILVRRS*PVLMRE
Trigger: CTCTCTCATCAATACTGGTCAGCTCCTTCGGACAAG...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGGCGCTCTTGTGGCGTaGAGCCAGCATTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKGALVA*SQHSFC
Trigger: ACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATATTCCCAGGCTCAAAGTaGTTTAGGGGTGGTGTCACA +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIFPGSK*FRGGVT
Trigger: TGTGACACCACCCCTAAATCACTTTGAGCCTGGGAA...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGGGCTGGGCCCTCTCCTaGTGCCTCTTTGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEGWALS*CLFVIF
Trigger: AAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAGCC...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTACCAGACCTCGGCCTaGATTAGGTACATATGCTGT +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSYQTSA*IRYICC
Trigger: ACAGCATATGTACCTAATGCAGGCCGAGGTCTGGTA...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTTGGCAGGTTTGCCACTaGGTGAGGTTTTCTGATCTG +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPWQVCH*VRFSDL
Trigger: CAGATCAGAAAACCTCACCCAGTGGCAAACCTGCCA...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACTGGCAGGTTTGCCACTaGGTGAGGTTTTCTGATCTG +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYWQVCH*VRFSDL
Trigger: CAGATCAGAAAACCTCACCCAGTGGCAAACCTGCCA...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGTAAGAAACTTTGAGTaGGCACTGGCGGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYVRNFE*ALAGKQ
Trigger: CTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTAC...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTGTAAGAAACTTTGAGTaGGCACTGGCGGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPVRNFE*ALAGKQ
Trigger: CTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTAC...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTAAGAAACTTTGAGTaGGCACTGGCGGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KILGLKELYHRSLVGGFLVRNFE*ALAGKQ
Trigger: CTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTAC...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGGCCTTGGCGCTCTTGTaGCGTGAAGCCAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMALALL*REASIL
Trigger: AAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGC...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAATTCCCCGAAGCCTTaGCGCTCTTGTGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMNSPKP*RSCGVK
Trigger: CTTCACGCCACAAGAGCGCCAAGGCTTCGGGGAATT...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGTCCAAGAGCAGATCTTaGGTGTGGCAGGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMSKSRS*VWQVCH
Trigger: GTGGCAAACCTGCCACACTCAAGATCTGCTCTTGGA...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTGAACATTTGGTCTCTTaGAGGCACAGTATATCTGGG +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSEHLVS*RHSISG
Trigger: CCCAGATATACTGTGCCTTCAAGAGACCAAATGTTC...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGCTTGTCCGAAGGAGCTaGCCAGTATTGATGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHELVRRS*PVLMRE
Trigger: CTCTCTCATCAATACTGGTCAGCTCCTTCGGACAAG...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAACTTGTCCGAAGGAGCTaGCCAGTATTGATGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKLVRRS*PVLMRE
Trigger: CTCTCTCATCAATACTGGTCAGCTCCTTCGGACAAG...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAACTTCATGTGCCACATTaGGGTCTCCACACAGCACAA +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKLHVPH*GLHTAQ
Trigger: TTGTGCTGTGTGGAGACCTCAATGTGGCACATGAAG...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGCTTCATGTGCCACATTaGGGTCTCCACACAGCACAA +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHELHVPH*GLHTAQ
Trigger: TTGTGCTGTGTGGAGACCTCAATGTGGCACATGAAG...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGGGCGCTCTTGTGGCGTaGAGCCAGCATTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMGALVA*SQHSFC
Trigger: ACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCC...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACATCTAGGAAGAAGGGCTaGTTTCATTCCCTTACCTGT +
Preference number: 4 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTSRKKG*FHSLTC
Trigger: ACAGGTAAGGGAATGAAATCAGCCCTTCTTCCTAGA...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR GCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTTGGGCCCTCTCCTGCTaGCTCTTTGTCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPWALSC*LFVIFL
Trigger: AAGAAAAATGACAAAGAGGCAGCAGGAGAGGGCCCA...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGGGCTGGGCCCTCTCCTaGTGCCTCTTTGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMGWALS*CLFVIF
Trigger: AAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAGCC...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATATACCAGACCTCGGCCTaGATTAGGTACATATGCTGT +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIYQTSA*IRYICC
Trigger: ACAGCATATGTACCTAATGCAGGCCGAGGTCTGGTA...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGTGGGCCCTCTCCTGCTaGCTCTTTGTCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEWALSC*LFVIFL
Trigger: AAGAAAAATGACAAAGAGGCAGCAGGAGAGGGCCCA...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGTACCAGACCTCGGCCTaGATTAGGTACATATGCTGT +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEYQTSA*IRYICC
Trigger: ACAGCATATGTACCTAATGCAGGCCGAGGTCTGGTA...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTGTCAATTTCTTCATGTaGCACATTGAGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFVNFFM*HIEVST
Trigger: TGTGGAGACCTCAATGTGGCACATGAAGAAATTGAC...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp GGCGCCAACCAACATTCTTGGATCGAGCATTCATCATATAAGTCCAAAAGGTGTGTCAATTTCTTCATGTaGCACATTGAGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: GANQHSWIEHSSYKSKRCVNFFM*HIEVST
Trigger: TGTGGAGACCTCAATGTGGCACATGAAGAAATTGAC...ACACCTTTTGGACTTATATGATGAATGCTCGATCCAAGAATGTTGGTTGGCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR GCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATATGTTCCCCTTGGGGTTaGGAAGGTCAATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFICSPWG*EGQFLH
Trigger: ATGAAGAAATTGACCTTCGCAACCCCAAGGGGAACA...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGTGGCAGGTTTGCCACTaGGTGAGGTTTTCTGATCTG +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMWQVCH*VRFSDL
Trigger: CAGATCAGAAAACCTCACCCAGTGGCAAACCTGCCA...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACAAGGCACAGTATATCTaGGGCTTCTTCCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYKAQYI*GFFLYP
Trigger: TGGGTAAAGGAAGAAGCCCCAGATATACTGTGCCTT...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAAAGGCACAGTATATCTaGGGCTTCTTCCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: KILGLKELYHRSLVGGFLKAQYI*GFFLYP
Trigger: TGGGTAAAGGAAGAAGCCCCAGATATACTGTGCCTT...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAAGGCACAGTATATCTaGGGCTTCTTCCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPKAQYI*GFFLYP
Trigger: TGGGTAAAGGAAGAAGCCCCAGATATACTGTGCCTT...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTCTTTTTGTTCCCCTTaGGGTTGCGAAGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSSFCSP*GCEGQF
Trigger: AAATTGACCTTCGCAACCCCAAGGGGAACAAAAAGA...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGAACATTTGGTCTCTTaGAGGCACAGTATATCTGGG +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKEHLVS*RHSISG
Trigger: CCCAGATATACTGTGCCTTCAAGAGACCAAATGTTC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR TCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGGAACATTTGGTCTCTTaGAGGCACAGTATATCTGGG +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEEHLVS*RHSISG
Trigger: CCCAGATATACTGTGCCTTCAAGAGACCAAATGTTC...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGTCAATTTCTTCATGTaGCACATTGAGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYVNFFM*HIEVST
Trigger: TGTGGAGACCTCAATGTGGCACATGAAGAAATTGAC...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGTGTTCCCCTTGGGGTTaGGAAGGTCAATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHECSPWG*EGQFLH
Trigger: ATGAAGAAATTGACCTTCGCAACCCCAAGGGGAACA...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAATGTTCCCCTTGGGGTTaGGAAGGTCAATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKCSPWG*EGQFLH
Trigger: ATGAAGAAATTGACCTTCGCAACCCCAAGGGGAACA...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTGCCAACCAACATTCTTaGATCGAGCATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFANQHS*IEHSSY
Trigger: ATATGATGAATGCTCGATCCAAGAATGTTGGTTGGC...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTGCCAACCAACATTCTTaGATCGAGCATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSANQHS*IEHSSY
Trigger: ATATGATGAATGCTCGATCCAAGAATGTTGGTTGGC...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTTTTGTCATTTTTCTTTaGGGCCGTCTTACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFFVIFL*GRLTLL
Trigger: AAGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAA...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACATTTGTCATTTTTCTTTaGGGCCGTCTTACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTFVIFL*GRLTLL
Trigger: AAGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAA...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR GCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATATGCATTAGGTACATATaGTGTTACCAGCACAAACGA +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFICIRYI*CYQHKR
Trigger: TCGTTTGTGCTGGTAACAGCATATGTACCTAATGCA...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTTGTTCTCTGAACATTTaGTCTCTTGAAGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPCSLNI*SLEGTV
Trigger: TACTGTGCCTTCAAGAGACCAAATGTTCAGAGAACA...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAATCTTTTTGTTCCCCTTaGGGTTGCGAAGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKSFCSP*GCEGQF
Trigger: AAATTGACCTTCGCAACCCCAAGGGGAACAAAAAGA...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATAGCCAACCAACATTCTTaGATCGAGCATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIANQHS*IEHSSY
Trigger: ATATGATGAATGCTCGATCCAAGAATGTTGGTTGGC...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTGAATGCAGATTTCTCTaGAGAGTGTTTAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPECRFL*RVFKEG
Trigger: TCCTTCTTTAAACACTCTTCAGAGAAATCTGCATTC...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGAATGCAGATTTCTCTaGAGAGTGTTTAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYECRFL*RVFKEG
Trigger: TCCTTCTTTAAACACTCTTCAGAGAAATCTGCATTC...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR TCA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGAATGCAGATTTCTCTaGAGAGTGTTTAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KILGLKELYHRSLVGGFLECRFL*RVFKEG
Trigger: TCCTTCTTTAAACACTCTTCAGAGAAATCTGCATTC...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR GCA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTATTTGTCATTTTTCTTTaGGGCCGTCTTACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KILGLKELYHRSLVGGFLFVIFL*GRLTLL
Trigger: AAGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAA...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAATGCATTAGGTACATATaGTGTTACCAGCACAAACGA +
Preference number: 4 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKCIRYI*CYQHKR
Trigger: TCGTTTGTGCTGGTAACAGCATATGTACCTAATGCA...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR GCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGTGCATTAGGTACATATaGTGTTACCAGCACAAACGA +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHECIRYI*CYQHKR
Trigger: TCGTTTGTGCTGGTAACAGCATATGTACCTAATGCA...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGTGTTCTCTGAACATTTaGTCTCTTGAAGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHECSLNI*SLEGTV
Trigger: TACTGTGCCTTCAAGAGACCAAATGTTCAGAGAACA...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CCA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGTCTTTTTGTTCCCCTTaGGGTTGCGAAGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMSFCSP*GCEGQF
Trigger: AAATTGACCTTCGCAACCCCAAGGGGAACAAAAAGA...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CCA 90 bp ACAAAAAGTAATCAAGGCGCCAACCAACATTCTTGGATCGAGCATTCATCATATTCTTTTTGTTCCCCTTaGGGTTGCGAAGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: TKSNQGANQHSWIEHSSYSFCSP*GCEGQF
Trigger: AAATTGACCTTCGCAACCCCAAGGGGAACAAAAAGA...ATATGATGAATGCTCGATCCAAGAATGTTGGTTGGCGCCTTGATTACTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS GCA 90 bp CACACAGCACAAGGGGCTTTCGGGAAGCCAGGCCCTTCAGGAACTTaGGAAAGGCTTCATCCCAGCGCTGCCGGTACTCCAGTCGTACCA +
Preference number: 5 (lower is better)
Translates to: HTAQGAFGKPGPSGT*ERLHPSAAGTPVVP
Trigger: TGGTACGACTGGAGTACCGGCAGCGCTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGGCCTGGCTTCCCGAAAGCCCCTTGTGCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000438886.1
ENST00000553555.5
ENST00000553681.5
ENST00000555414.5
ENST00000555839.5
ENST00000557159.5
ENST00000557365.1
CDS GCA 90 bp GAAGCCAGGCCCTTCAGGAACTTGCGAAAGGCTTCATCCCAGCGCTaGCGGTACTCCAGTCGTACCAGACCTCGGCCTGCATTAGGTACA +
Preference number: 5 (lower is better)
Translates to: EARPFRNLRKASSQR*RYSSRTRPRPALGT
Trigger: TGTACCTAATGCAGGCCGAGGTCTGGTACGACTGGAGTACCGGCAGCGCTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGGCCTGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000438886.1
ENST00000553555.5
ENST00000553681.5
ENST00000555414.5
ENST00000557159.5
ENST00000557365.1
CDS CCA 90 bp CGCTCCCTTTTTCCCACGCTTCGGCATTCCCGTTACGAACGCCCTTaGGCAGCTGTACCGCGTCACCCACCGAAGCAATATTTTTACCGC +
Preference number: 5 (lower is better)
Translates to: RSLFPTLRHSRYERP*AAVPRHPPKQYFYR
Trigger: GCGGTAAAAATATTGCTTCGGTGGGTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACGGGAATGCCGAAGCGTGGGAAAAAGGGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000554325.1
ENST00000555306.5
ENST00000555414.5
ENST00000555839.5
ENST00000556054.5
ENST00000556296.1
ENST00000557054.1
ENST00000557150.5
ENST00000557159.5
ENST00000557181.5
ENST00000557344.5
CDS-3UTR CAA 90 bp CCCGAAGCCTTGGCGCTCTTGTGGCGTGAAGCCAGCATTCTTTTTGTTCCCCTTGGTCCTGACTCAAGCTaGCCGTTCAGACTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: PEALALLWREASILFVPLGPDSS*PFRLPA
Trigger: CGCTGGCAGTCTGAACGGCAAGCTTGAGTCAGGACC...AAGGGGAACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS TCA 90 bp GGAAAGCAGGCCCACGCCACTGTACCCTTCCTTGTCCGAAGGAGCTaGCCAGTATTGATGAGAGAGTCCAGGCAGCTCCTGAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GKQAHATVPFLVRRS*PVLMRESRQLLKFS
Trigger: GCTGAACTTCAGGAGCTGCCTGGACTCTCTCATCAATACTGGTCAGCTCCTTCGGACAAGGAAGGGTACAGTGGCGTGGGCCTGCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000438886.1
ENST00000553555.5
ENST00000553681.5
ENST00000554813.5
ENST00000555306.5
ENST00000555414.5
ENST00000555839.5
ENST00000556054.5
ENST00000557150.5
ENST00000557159.5
ENST00000557344.5
ENST00000557365.1
ENST00000557592.5
CDS TCA 90 bp AAGGGAATGACAAACACCCCCGCCGCAGCTTCTAGGAAGAAGGGCTaGTTTCATTCCCTTACCTGTCCTGAGCTCATCCCCGTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: KGMTNTPAAASRKKG*FHSLTCPELIPVFR
Trigger: GCGGAAGACGGGGATGAGCTCAGGACAGGTAAGGGAATGAAATCAGCCCTTCTTCCTAGAAGCTGCGGCGGGGGTGTTTGTCATTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000554325.1
ENST00000555306.5
ENST00000557150.5
ENST00000557159.5
CDS TCA 90 bp CCCTGCAAAAATGAGTCGGCCCGTACTTACCGTACATCAAGGGAATaGCAAACACCCCCGCCGCAGCTTCTAGGAAGAAGGGCTGATTTC +
Preference number: 5 (lower is better)
Translates to: PCKNESARTYRTSRE*QTPPPQLLGRRADF
Trigger: GAAATCAGCCCTTCTTCCTAGAAGCTGCGGCGGGGGTGTTTGTCATTCCCTTGATGTACGGTAAGTACGGGCCGACTCATTTTTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS GCA 90 bp TTCATCCCAGCGCTGCCGGTACTCCAGTCGTACCAGACCTCGGCCTaGATTAGGTACATATGCTGTTACCAGCACAAACGAGTCAAATTC +
Preference number: 5 (lower is better)
Translates to: FIPALPVLQSYQTSA*IRYICCYQHKRVKF
Trigger: GAATTTGACTCGTTTGTGCTGGTAACAGCATATGTACCTAATGCAGGCCGAGGTCTGGTACGACTGGAGTACCGGCAGCGCTGGGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000554813.5
ENST00000555414.5
ENST00000557159.5
ENST00000557365.1
CDS GCA 90 bp TGCGATCCGGCGTTAACTATAGACCCAACGAAAGCCTACGGTTCCTaGGACTTCTTCACAAACCCCTGCAAAAATGAGTCGGCCCGTACT +
Preference number: 5 (lower is better)
Translates to: CDPALTIDPTKAYGS*DFFTNPCKNESART
Trigger: AGTACGGGCCGACTCATTTTTGCAGGGGTTTGTGAAGAAGTCGCAGGAACCGTAGGCTTTCGTTGGGTCTATAGTTAACGCCGGATCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS-3UTR CAA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACACCGTTACGAACGCCCTaGGGCAGCTGTACCGCGTCA +
Preference number: 5 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTPLRTP*GSCTAS
Trigger: TGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACGG...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR CAA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACAGGTCCTGACTCAAGCTaGCCGTTCAGACTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTGPDSS*PFRLPA
Trigger: CGCTGGCAGTCTGAACGGCAAGCTTGAGTCAGGACC...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR CAA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTCCGTTACGAACGCCCTaGGGCAGCTGTACCGCGTCA +
Preference number: 5 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPPLRTP*GSCTAS
Trigger: TGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACGG...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp CCCGAAGCCTTGGCGCTCTTGTGGCGTGAAGCCAGCATTCTTTTTGTTCCCCTTCGCCAACCAACATTCTaGGATCGAGCATTCATCATA +
Preference number: 5 (lower is better)
Translates to: PEALALLWREASILFVPLRQPTF*DRAFII
Trigger: TATGATGAATGCTCGATCCAAGAATGTTGGTTGGCG...AAGGGGAACAAAAAGAATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR CAA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTACCGCGTTGCTCAAGCTaGCCGTTCAGACTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: KILGLKELYHRSLVGGFLPRCSS*PFRLPA
Trigger: CGCTGGCAGTCTGAACGGCAAGCTTGAGCAACGCGG...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555414.5
CDS TCA 90 bp CGAAGCAATATTTTTACCGCGTTGCCTACAGACGCAAAGAAATCATaGAACCAGCTAAGGCTGGGGAGAAGACTCCTCCCAAGAGCGTCC +
Preference number: 5 (lower is better)
Translates to: RSNIFTALPTDAKKS*NQLRLGRRLLPRAS
Trigger: GGACGCTCTTGGGAGGAGTCTTCTCCCCAGCCTTAGCTGGTTTCATGATTTCTTTGCGTCTGTAGGCAACGCGGTAAAAATATTGCTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553555.5
ENST00000556296.1
ENST00000557159.5
CDS TCA 90 bp GAAAGCCTACGGTTCCTGCGACTTCTTCACAAACCCCTGCAAAAATaGGTCGGCCCGTACTTACCGTACATCAAGGGAATGACAAACACC +
Preference number: 5 (lower is better)
Translates to: ESLRFLRLLHKPLQK*VGPYLPYIKGMTNT
Trigger: GGTGTTTGTCATTCCCTTGATGTACGGTAAGTACGGGCCGACTCATTTTTGCAGGGGTTTGTGAAGAAGTCGCAGGAACCGTAGGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS-3UTR CAA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGGTCCTGACTCAAGCTaGCCGTTCAGACTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: KILGLKELYHRSLVGGFLGPDSS*PFRLPA
Trigger: CGCTGGCAGTCTGAACGGCAAGCTTGAGTCAGGACC...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216714.8
ENST00000557054.1
CDS-3UTR CAA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTCCACTGTACCCTTCCTaGTCCGAAGGAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFPLYPS*SEGADQ
Trigger: CTGGTCAGCTCCTTCGGACAAGGAAGGGTACAGTGG...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTTCACTGCCGAGGGCCTaGGAACGGATCTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFSLPRA*ERILLS
Trigger: TGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTGA...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp GGCGCCAACCAACATTCTTGGATCGAGCATTCATCATATAAGTCCAAAAGGTGTTCACTGCCGAGGGCCTaGGAACGGATCTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: GANQHSWIEHSSYKSKRCSLPRA*ERILLS
Trigger: TGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTGA...ACACCTTTTGGACTTATATGATGAATGCTCGATCCAAGAATGTTGGTTGGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR CAA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGCCGTTACGAACGCCCTaGGGCAGCTGTACCGCGTCA +
Preference number: 5 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMPLRTP*GSCTAS
Trigger: TGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACGG...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATAGCCGTCTTACTCTTCTaGGCCTCTGGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFIAVLLF*ASGSVL
Trigger: CAGGACAGAGCCAGAGGCCAAGAAGAGTAAGACGGC...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTACCACTGTACCCTTCCTaGTCCGAAGGAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: KILGLKELYHRSLVGGFLPLYPS*SEGADQ
Trigger: CTGGTCAGCTCCTTCGGACAAGGAAGGGTACAGTGG...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTAGGCCCTTCAGGAACTaGCGAAAGGCTTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSRPFRN*RKASSQ
Trigger: CTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGGCCT...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTAGGCCCTTCAGGAACTaGCGAAAGGCTTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFRPFRN*RKASSQ
Trigger: CTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGGCCT...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACGAAGCCTTGGCGCTCTaGTGGCGTGAAGCCAGCATT +
Preference number: 5 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYEALAL*WREASI
Trigger: AATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTC...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTGAAGCCTTGGCGCTCTaGTGGCGTGAAGCCAGCATT +
Preference number: 5 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPEALAL*WREASI
Trigger: AATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTC...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACAGCCGTCTTACTCTTCTaGGCCTCTGGCTCGTACATC +
Preference number: 5 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTAVLLF*ASGSYI
Trigger: GATGTACGAGCCAGAGGCCAAGAAGAGTAAGACGGC...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR CAA 90 bp ACAATGCAGGTAACAGAGAGTGGGACAACAAAAAGTAATCAAGGCGCCAACCAAAGGCCCTTCAGGAACTaGCGAAAGGCGCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: TMQVTESGTTKSNQGANQRPFRN*RKALPF
Trigger: AAAAGGGAGCGCCTTTCGCAAGTTCCTGAAGGGCCT...TTGGTTGGCGCCTTGATTACTTTTTGTTGTCCCACTCTCTGTTACCTGCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS-3UTR CAA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGCCGTCTTACTCTTCTaGGCCTCTGGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKAVLLF*ASGSVL
Trigger: CAGGACAGAGCCAGAGGCCAAGAAGAGTAAGACGGC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTTTGAGTGTGGCAGGTTaGCCACTGGGTGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFLSVAG*PLGEVF
Trigger: GAAAACCTCACCCAGTGGCAAACCTGCCACACTCAA...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACAGGCCCTTCAGGAACTaGCGAAAGGCTTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYRPFRN*RKASSQ
Trigger: CTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGGCCT...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAAGAAGCCTTGGCGCTCTaGTGGCGTGAAGCCAGCATT +
Preference number: 5 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKEALAL*WREASI
Trigger: AATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTC...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGTCACTGCCGAGGGCCTaGGAACGGATCTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHESLPRA*ERILLS
Trigger: TGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTGA...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATATTGAGTGTGGCAGGTTaGCCACTGGGTGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFILSVAG*PLGEVF
Trigger: GAAAACCTCACCCAGTGGCAAACCTGCCACACTCAA...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTTTGAGTGTGGCAGGTTaGCCACTGGGTGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPLSVAG*PLGEVF
Trigger: GAAAACCTCACCCAGTGGCAAACCTGCCACACTCAA...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGCCACTGTACCCTTCCTaGTCCGAAGGAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMPLYPS*SEGADQ
Trigger: CTGGTCAGCTCCTTCGGACAAGGAAGGGTACAGTGG...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGGAAGCCTTGGCGCTCTaGTGGCGTGAAGCCAGCATT +
Preference number: 5 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMEALAL*WREASI
Trigger: AATGCTGGCTTCACGCCACAAGAGCGCCAAGGCTTC...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTGCCTTGGAACGGATCTaGCTGTCACACAATGCAGGT +
Preference number: 5 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPALERI*LSHNAG
Trigger: ACCTGCATTGTGTGACAGCAAGATCCGTTCCAAGGC...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGTCACTGCCGAGGGCCTaGGAACGGATCTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMSLPRA*ERILLS
Trigger: TGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTGA...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTAATATTTTTACCGCGTaGCCGTTCAGACTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFNIFTA*PFRLPA
Trigger: CGCTGGCAGTCTGAACGGCAACGCGGTAAAAATATT...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398030.8
CDS-3UTR CAA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGT +
Preference number: 5 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFLPSSQ*RILIKG
Trigger: ACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAG...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216714.8
ENST00000557054.1
CDS-3UTR CAA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACACTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGT +
Preference number: 5 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTLPSSQ*RILIKG
Trigger: ACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAG...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR CAA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTGTTCCCCTTGGGGTaGCGAAGGTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSLFPLG*RRSISS
Trigger: TGAAGAAATTGACCTTCGCAACCCCAAGGGGAACAA...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp CTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTTTGTTCCCCTTGGGGTaGCGAAGGTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LGLKRTLSQEPGWRIPSFLFPLG*RRSISS
Trigger: TGAAGAAATTGACCTTCGCAACCCCAAGGGGAACAA...AAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGGCCTTGGAACGGATCTaGCTGTCACACAATGCAGGT +
Preference number: 5 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHEALERI*LSHNAG
Trigger: ACCTGCATTGTGTGACAGCAAGATCCGTTCCAAGGC...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAATCTTCATGTGCCACATaGAGGTCTCCACACAGCACA +
Preference number: 5 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKSSCAT*RSPHST
Trigger: TGTGCTGTGTGGAGACCTCAATGTGGCACATGAAGA...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGTCTTCATGTGCCACATaGAGGTCTCCACACAGCACA +
Preference number: 5 (lower is better)
Translates to: KRTLSQEPGWRIPSFIHESSCAT*RSPHST
Trigger: TGTGCTGTGTGGAGACCTCAATGTGGCACATGAAGA...CTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTTTGTTCCCCTTGGGGTaGCGAAGGTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPLFPLG*RRSISS
Trigger: TGAAGAAATTGACCTTCGCAACCCCAAGGGGAACAA...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp TCCTTTACCCAATCTAATCCTTTCTTCTTAATCCAGGCTCGAAGCCCATCCACACTTTGTCATTTTTCTTaGCGGCCGTCTTACTCTTCT +
Preference number: 5 (lower is better)
Translates to: SFTQSNPFFLIQARSPSTLCHFS*RPSYSS
Trigger: AGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAAG...TGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGATTAGATTGGGTAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554325.1
CDS-3UTR CAA 90 bp AATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTAGTTCAGCTGGTAGTTaGTTCTCTGAACATTTGGTC +
Preference number: 5 (lower is better)
Translates to: NLGLKRTLSQEPGWRIPSSSAGS*FSEHLV
Trigger: GACCAAATGTTCAGAGAACAAACTACCAGCTGAACT...ACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGTCTTCATGTGCCACATaGAGGTCTCCACACAGCACA +
Preference number: 5 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMSSCAT*RSPHST
Trigger: TGTGCTGTGTGGAGACCTCAATGTGGCACATGAAGA...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTACGCCAACCAACATTCTaGGATCGAGCATTCATCATA +
Preference number: 5 (lower is better)
Translates to: KILGLKELYHRSLVGGFLRQPTF*DRAFII
Trigger: TATGATGAATGCTCGATCCAAGAATGTTGGTTGGCG...TAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACCGCCAACCAACATTCTaGGATCGAGCATTCATCATA +
Preference number: 5 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYRQPTF*DRAFII
Trigger: TATGATGAATGCTCGATCCAAGAATGTTGGTTGGCG...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS TCA 90 bp TTCTTTGCGGCCGTCTTACTCTTCTTGGCCTCTGGCTCTATAAAATaGGTAATATATACTGACAAAAAGCTGGTGGTTTCCAACTGCGAT +
Preference number: 5 (lower is better)
Translates to: FFAAVLLFLASGSIK*VIYTDKKLVVSNCD
Trigger: ATCGCAGTTGGAAACCACCAGCTTTTTGTCAGTATATATTACTCATTTTATAGAGCCAGAGGCCAAGAAGAGTAAGACGGCCGCAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS-3UTR CAA 90 bp AAAAATCTTGGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTCTTTGTCATTTTTCTTaGCGGCCGTCTTACTCTTCT +
Preference number: 5 (lower is better)
Translates to: KNLGLKRTLSQEPGWRIPLCHFS*RPSYSS
Trigger: AGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAAG...AGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCCAAGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp GGGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATAAGTTCAGCTGGTAGTTaGTTCTCTGAACATTTGGTC +
Preference number: 5 (lower is better)
Translates to: GLKRTLSQEPGWRIPSFISSAGS*FSEHLV
Trigger: GACCAAATGTTCAGAGAACAAACTACCAGCTGAACT...TATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp GGCTTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACAGTTCAGCTGGTAGTTaGTTCTCTGAACATTTGGTC +
Preference number: 5 (lower is better)
Translates to: GLKELYHRSLVGGFLVLYSSAGS*FSEHLV
Trigger: GACCAAATGTTCAGAGAACAAACTACCAGCTGAACT...GTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGTTGTTCCCCTTGGGGTaGCGAAGGTCAATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMLFPLG*RRSISS
Trigger: TGAAGAAATTGACCTTCGCAACCCCAAGGGGAACAA...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS-3UTR CAA 90 bp AGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGAGAAACTTTGTCATTTTTCTTaGCGGCCGTCTTACTCTTCT +
Preference number: 5 (lower is better)
Translates to: RTLSQEPGWRIPSFIHEKLCHFS*RPSYSS
Trigger: AGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAAG...TTTCTCATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
CDS-3UTR CAA 90 bp TTAAAAGAACTCTATCACAGGAGCCTGGTTGGAGGATTCCTAGTTTTATACATGCGCCAACCAACATTCTaGGATCGAGCATTCATCATA +
Preference number: 5 (lower is better)
Translates to: LKELYHRSLVGGFLVLYMRQPTF*DRAFII
Trigger: TATGATGAATGCTCGATCCAAGAATGTTGGTTGGCG...CATGTATAAAACTAGGAATCCTCCAACCAGGCTCCTGTGATAGAGTTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000555414.5
ENST00000557054.1
CDS CAA 90 bp CCACACAGCACAAGGGGCTTTCGGGAAGCCAGGCCCTTCAGGAACTaGCGAAAGGCTTCATCCCAGCGCTGCCGGTACTCCAGTCGTACC +
Preference number: 6 (lower is better)
Translates to: PHSTRGFREARPFRN*RKASSQRCRYSSRT
Trigger: GGTACGACTGGAGTACCGGCAGCGCTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGGCCTGGCTTCCCGAAAGCCCCTTGTGCTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000438886.1
ENST00000553555.5
ENST00000553681.5
ENST00000555414.5
ENST00000555839.5
ENST00000557159.5
ENST00000557365.1
CDS TCA 72 bp GTCGTACCAGACCTCGGCCTATGCCGTAAGAAACTTTaGGTGGGCACTGGCGGGAAAGCAGGCCCACGCCAC +
Preference number: 6 (lower is better)
Translates to: VVPDLGLCRKKL*VGTGGKAGPRH
Trigger: GTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCATAGGCCGAGGTCTGGTACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555839.5
CDS GCA 72 bp CCCTTCAGGAACTTGCGAAAGGCTTCATCCCAGCGCTaGCGGTACTCCAGTCGTACCAGACCTCGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: PFRNLRKASSQR*RYSSRTRPRPA
Trigger: TGCAGGCCGAGGTCTGGTACGACTGGAGTACCGGCAGCGCTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000438886.1
ENST00000553555.5
ENST00000553681.5
ENST00000555414.5
ENST00000557159.5
ENST00000557365.1
CDS CAA 72 bp ACAAGGGGCTTTCGGGAAGCCAGGCCCTTCAGGAACTaGCGAAAGGCTTCATCCCAGCGCTGCCGGTACTCC +
Preference number: 6 (lower is better)
Translates to: TRGFREARPFRN*RKASSQRCRYS
Trigger: GGAGTACCGGCAGCGCTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGGCCTGGCTTCCCGAAAGCCCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000438886.1
ENST00000553555.5
ENST00000553681.5
ENST00000555414.5
ENST00000555839.5
ENST00000557159.5
ENST00000557365.1
CDS GCA 72 bp CCCTTCAGGAACTTGCGAAAGGCTTCATCCCAGCGCTaGCGGTACTCCAGTCGTACCAGACCTCGGCCTATG +
Preference number: 6 (lower is better)
Translates to: PFRNLRKASSQR*RYSSRTRPRPM
Trigger: CATAGGCCGAGGTCTGGTACGACTGGAGTACCGGCAGCGCTGGGATGAAGCCTTTCGCAAGTTCCTGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555839.5
CDS CAA 90 bp CCGCTCCCTTTTTCCCACGCTTCGGCATTCCCGTTACGAACGCCCTaGGGCAGCTGTACCGCGTCACCCACCGAAGCAATATTTTTACCG +
Preference number: 6 (lower is better)
Translates to: PLPFSHASAFPLRTP*GSCTASPTEAIFLP
Trigger: CGGTAAAAATATTGCTTCGGTGGGTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACGGGAATGCCGAAGCGTGGGAAAAAGGGAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000554325.1
ENST00000555306.5
ENST00000555414.5
ENST00000555839.5
ENST00000556054.5
ENST00000556296.1
ENST00000557150.5
ENST00000557159.5
ENST00000557181.5
ENST00000557344.5
CDS CAA 90 bp GCGCTCCCTTTTTCCCACGCTTCGGCATTCCCGTTACGAACGCCCTaGGGCAGCTGTACCGCGTCACCCACCGAAGCAATATTTTTACCG +
Preference number: 6 (lower is better)
Translates to: ALPFSHASAFPLRTP*GSCTASPTEAIFLP
Trigger: CGGTAAAAATATTGCTTCGGTGGGTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACGGGAATGCCGAAGCGTGGGAAAAAGGGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557054.1
CDS TCA 72 bp GCCCACGCCACTGTACCCTTCCTTGTCCGAAGGAGCTaGCCAGTATTGATGAGAGAGTCCAGGCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: AHATVPFLVRRS*PVLMRESRQLL
Trigger: CAGGAGCTGCCTGGACTCTCTCATCAATACTGGTCAGCTCCTTCGGACAAGGAAGGGTACAGTGGCGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000438886.1
ENST00000553555.5
ENST00000553681.5
ENST00000554813.5
ENST00000555306.5
ENST00000555414.5
ENST00000555839.5
ENST00000556054.5
ENST00000557150.5
ENST00000557159.5
ENST00000557344.5
ENST00000557365.1
ENST00000557592.5
CDS TCA 72 bp GATCATGCTCCTCATCGCCTATGCCGTAAGAAACTTTaGGTGGGCACTGGCGGGAAAGCAGGCCCACGCCAC +
Preference number: 6 (lower is better)
Translates to: DHAPHRLCRKKL*VGTGGKAGPRH
Trigger: GTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCATAGGCGATGAGGAGCATGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000554813.5
ENST00000555414.5
ENST00000556054.5
ENST00000557150.5
ENST00000557159.5
ENST00000557365.1
ENST00000557592.5
CDS CCA 72 bp TTTCCCACGCTTCGGCATTCCCGTTACGAACGCCCTTaGGCAGCTGTACCGCGTCACCCACCGAAGCAATAT +
Preference number: 6 (lower is better)
Translates to: FPTLRHSRYERP*AAVPRHPPKQY
Trigger: ATATTGCTTCGGTGGGTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACGGGAATGCCGAAGCGTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000554325.1
ENST00000555306.5
ENST00000555414.5
ENST00000555839.5
ENST00000556054.5
ENST00000556296.1
ENST00000557054.1
ENST00000557150.5
ENST00000557159.5
ENST00000557181.5
ENST00000557344.5
CDS CCA 72 bp TACCAGACCTCGGCCTATGCCGTAAGAAACTTTGAGTaGGCACTGGCGGGAAAGCAGGCCCACGCCACTGTA +
Preference number: 6 (lower is better)
Translates to: YQTSAYAVRNFE*ALAGKQAHATV
Trigger: TACAGTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCATAGGCCGAGGTCTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555839.5
CDS CAA 72 bp TTTTCCCACGCTTCGGCATTCCCGTTACGAACGCCCTaGGGCAGCTGTACCGCGTCACCCACCGAAGCAATA +
Preference number: 6 (lower is better)
Translates to: FSHASAFPLRTP*GSCTASPTEAI
Trigger: TATTGCTTCGGTGGGTGACGCGGTACAGCTGCCCAAGGGCGTTCGTAACGGGAATGCCGAAGCGTGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000554325.1
ENST00000555306.5
ENST00000555414.5
ENST00000555839.5
ENST00000556054.5
ENST00000556296.1
ENST00000557054.1
ENST00000557150.5
ENST00000557159.5
ENST00000557181.5
ENST00000557344.5
CDS TCA 72 bp TACTCTTCTTGGCCTCTGGCTCGTACATCAAGGGAATaGCAAACACCCCCGCCGCAGCCTACTCGCGAGATC +
Preference number: 6 (lower is better)
Translates to: YSSWPLARTSRE*QTPPPQPTREI
Trigger: GATCTCGCGAGTAGGCTGCGGCGGGGGTGTTTGTCATTCCCTTGATGTACGAGCCAGAGGCCAAGAAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553368.1
CDS CCA 72 bp ATGCTCCTCATCGCCTATGCCGTAAGAAACTTTGAGTaGGCACTGGCGGGAAAGCAGGCCCACGCCACTGTA +
Preference number: 6 (lower is better)
Translates to: MLLIAYAVRNFE*ALAGKQAHATV
Trigger: TACAGTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCATAGGCGATGAGGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000554813.5
ENST00000555414.5
ENST00000556054.5
ENST00000557150.5
ENST00000557159.5
ENST00000557365.1
ENST00000557592.5
CDS CAA 90 bp AACACCCCCGCCGCAGCCTACTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTGCCGTTCAGA +
Preference number: 6 (lower is better)
Translates to: NTPAAAYSRDLPSSQ*RILIKGPDSSLPFR
Trigger: TCTGAACGGCAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGTAGGCTGCGGCGGGGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553368.1
CDS TCA 72 bp ACAAACACCCCCGCCGCAGCTTCTAGGAAGAAGGGCTaGTTTCATTCCCTTACCTGTCCTGAGCTCATCCCC +
Preference number: 6 (lower is better)
Translates to: TNTPAAASRKKG*FHSLTCPELIP
Trigger: GGGGATGAGCTCAGGACAGGTAAGGGAATGAAATCAGCCCTTCTTCCTAGAAGCTGCGGCGGGGGTGTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000554325.1
ENST00000555306.5
ENST00000557150.5
ENST00000557159.5
CDS TCA 72 bp TACTCTTCTTGGCCTCTGGCTCGTACATCAAGGGAATaGCAAACACCCCCGCCGCAGCTTTCAAGCTTGCCG +
Preference number: 6 (lower is better)
Translates to: YSSWPLARTSRE*QTPPPQLSSLP
Trigger: CGGCAAGCTTGAAAGCTGCGGCGGGGGTGTTTGTCATTCCCTTGATGTACGAGCCAGAGGCCAAGAAGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557592.5
CDS GCA 72 bp GCGCTGCCGGTACTCCAGTCGTACCAGACCTCGGCCTaGATTAGGTACATATGCTGTTACCAGCACAAACGA +
Preference number: 6 (lower is better)
Translates to: ALPVLQSYQTSA*IRYICCYQHKR
Trigger: TCGTTTGTGCTGGTAACAGCATATGTACCTAATGCAGGCCGAGGTCTGGTACGACTGGAGTACCGGCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000554813.5
ENST00000555414.5
ENST00000557159.5
ENST00000557365.1
ENST00000557592.5
CDS CAA 72 bp CTGGGCCCTCTCCTGCTGCCTCTTTGTCATTTTTCTTaGCGGCCGTCTTACTCTTCTTGGCCTCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LGPLLLPLCHFS*RPSYSSWPLAL
Trigger: CAGAGCCAGAGGCCAAGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000553555.5
ENST00000553681.5
ENST00000555414.5
ENST00000555839.5
ENST00000556054.5
ENST00000557181.5
ENST00000557344.5
CDS CAA 72 bp CTGGGCCCTCTCCTGCTGCCTCTTTGTCATTTTTCTTaGCGGCCGTCTTACTCTTCTTGGCCTCTGGCTCGT +
Preference number: 6 (lower is better)
Translates to: LGPLLLPLCHFS*RPSYSSWPLAR
Trigger: ACGAGCCAGAGGCCAAGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553368.1
ENST00000554325.1
ENST00000557150.5
ENST00000557592.5
CDS CAA 72 bp CTGGGCCCTCTCCTGCTGCCTCTTTGTCATTTTTCTTaGCGGCCGTCTTACTCTTCTTGGCCTCTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: LGPLLLPLCHFS*RPSYSSWPLAP
Trigger: AGGAGCCAGAGGCCAAGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557365.1
CDS TCA 72 bp TACTCTTCTTGGCCTCTGGCTCGTACATCAAGGGAATaGCAAACACCCCCGCCGCAGCTTCTAGGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: YSSWPLARTSRE*QTPPPQLLGRR
Trigger: CCTTCTTCCTAGAAGCTGCGGCGGGGGTGTTTGTCATTCCCTTGATGTACGAGCCAGAGGCCAAGAAGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554325.1
ENST00000557150.5
CDS TCA 72 bp AATGAGTCGGCCCGTACTTACCGTACATCAAGGGAATaGCAAACACCCCCGCCGCAGCTTCTAGGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: NESARTYRTSRE*QTPPPQLLGRR
Trigger: CCTTCTTCCTAGAAGCTGCGGCGGGGGTGTTTGTCATTCCCTTGATGTACGGTAAGTACGGGCCGACTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS GCA 72 bp CTTCTTGGCCTCTGGCTTCAAGCTTGCCGTTCAGACTaGCAGCGAAGCCCCTCTTATGAGCAAAAGAGCAAC +
Preference number: 6 (lower is better)
Translates to: LLGLWLQACRSD*QRSPSYEQKSN
Trigger: GTTGCTCTTTTGCTCATAAGAGGGGCTTCGCTGGCAGTCTGAACGGCAAGCTTGAAGCCAGAGGCCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554813.5
CDS CAA 72 bp GCCGCAGCCTACTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: AAAYSRDLPSSQ*RILIKGPDSSL
Trigger: CAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGTAGGCTGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553368.1
CDS CAA 72 bp CTGGGCCCTCTCCTGCTGCCTCTTTGTCATTTTTCTTaGCGGCCGTCTTACTCTTCTTGGCCTCTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: LGPLLLPLCHFS*RPSYSSWPLAS
Trigger: TGAAGCCAGAGGCCAAGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554813.5
CDS CAA 72 bp CTGGGCCCTCTCCTGCTGCCTCTTTGTCATTTTTCTTaGCGGCCGTCTTACTCTTCTTGGCCTCTGGCTCTA +
Preference number: 6 (lower is better)
Translates to: LGPLLLPLCHFS*RPSYSSWPLAL
Trigger: TAGAGCCAGAGGCCAAGAAGAGTAAGACGGCCGCAAAGAAAAATGACAAAGAGGCAGCAGGAGAGGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS CAA 90 bp CCGCGTTGCCTTGTACCCTACTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTGCCGTTCAGA +
Preference number: 6 (lower is better)
Translates to: PRCLVPYSRDLPSSQ*RILIKGPDSSLPFR
Trigger: TCTGAACGGCAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGTAGGGTACAAGGCAACGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557181.5
CDS GCA 72 bp GCGCTGCCGGTACTCCAGTCGTACCAGACCTCGGCCTaGATTAGGTACATATGCTATGCCGTAAGAAACTTT +
Preference number: 6 (lower is better)
Translates to: ALPVLQSYQTSA*IRYICYAVRNF
Trigger: AAAGTTTCTTACGGCATAGCATATGTACCTAATGCAGGCCGAGGTCTGGTACGACTGGAGTACCGGCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438886.1
CDS CAA 72 bp GCGTTGCCCTACTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: ALPYSRDLPSSQ*RILIKGPDSSL
Trigger: CAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGTAGGGCAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216714.8
ENST00000554325.1
ENST00000555306.5
ENST00000555839.5
ENST00000557054.1
CDS CAA 72 bp CGCGTTGCCCACGAAACTAGATCATTTCATAGTGCCTaGTACCCTACTCGCGAGATCTGCCCTCCAGCCAAT +
Preference number: 6 (lower is better)
Translates to: RVAHETRSFHSA*YPTREICPPAN
Trigger: ATTGGCTGGAGGGCAGATCTCGCGAGTAGGGTACAAGGCACTATGAAATGATCTAGTTTCGTGGGCAACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556054.5
CDS CAA 72 bp CCCCTCACCCACGAAACTAGATCATTTCATAGTGCCTaGTACCCTACTCGCGAGATCTGCCCTCCAGCCAAT +
Preference number: 6 (lower is better)
Translates to: PLTHETRSFHSA*YPTREICPPAN
Trigger: ATTGGCTGGAGGGCAGATCTCGCGAGTAGGGTACAAGGCACTATGAAATGATCTAGTTTCGTGGGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553555.5
ENST00000556296.1
ENST00000557159.5
CDS CAA 90 bp TTCTTGGCCTCTGGCTCCTACTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTGCCGTTCAGA +
Preference number: 6 (lower is better)
Translates to: FLASGSYSRDLPSSQ*RILIKGPDSSLPFR
Trigger: TCTGAACGGCAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGTAGGAGCCAGAGGCCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557365.1
CDS TCA 72 bp CGGTTCCTGCGACTTCTTCACAAACCCCTGCAAAAATaGGTCGGCCCGTACTTACCGTACATCAAGGGAATG +
Preference number: 6 (lower is better)
Translates to: RFLRLLHKPLQK*VGPYLPYIKGM
Trigger: CATTCCCTTGATGTACGGTAAGTACGGGCCGACTCATTTTTGCAGGGGTTTGTGAAGAAGTCGCAGGAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS CCA 72 bp ATTAGGTACATATGCTATGCCGTAAGAAACTTTGAGTaGGCACTGGCGGGAAAGCAGGCCCACGCCACTGTA +
Preference number: 6 (lower is better)
Translates to: IRYICYAVRNFE*ALAGKQAHATV
Trigger: TACAGTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCATAGCATATGTACCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438886.1
CDS CAA 72 bp TTACCGCGTTGCTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: LPRCSRDLPSSQ*RILIKGPDSSL
Trigger: CAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGCAACGCGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557344.5
CDS CAA 72 bp TCTGGCTCCTACTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: SGSYSRDLPSSQ*RILIKGPDSSL
Trigger: CAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGTAGGAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557365.1
CDS CAA 90 bp ATTTTTACCGCGTTGCCCTACTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTGCCGTTCAGA +
Preference number: 6 (lower is better)
Translates to: IFTALPYSRDLPSSQ*RILIKGPDSSLPFR
Trigger: TCTGAACGGCAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGTAGGGCAACGCGGTAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216714.8
ENST00000554325.1
ENST00000555306.5
ENST00000555839.5
ENST00000557054.1
CDS GCA 72 bp AAAGCCTACGGTTCCTGCGACTTCTTCACAAACCCCTaGAAAAATGAGTCGGCCCGTACTTACCGTACATCA +
Preference number: 6 (lower is better)
Translates to: KAYGSCDFFTNP*KNESARTYRTS
Trigger: TGATGTACGGTAAGTACGGGCCGACTCATTTTTGCAGGGGTTTGTGAAGAAGTCGCAGGAACCGTAGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS CAA 72 bp CTTGTACCCTACTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: LVPYSRDLPSSQ*RILIKGPDSSL
Trigger: CAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGTAGGGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553555.5
ENST00000556054.5
ENST00000556296.1
ENST00000557159.5
ENST00000557181.5
CDS CAA 90 bp GCAATATTTTTACCGCGTTGCTCGCGAGATCTGCCCTCCAGCCAATaGAGGATCTTAATTAAGGGTCCTGACTCAAGCTTGCCGTTCAGA +
Preference number: 6 (lower is better)
Translates to: AIFLPRCSRDLPSSQ*RILIKGPDSSLPFR
Trigger: TCTGAACGGCAAGCTTGAGTCAGGACCCTTAATTAAGATCCTCAATTGGCTGGAGGGCAGATCTCGCGAGCAACGCGGTAAAAATATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557344.5
CDS TCA 72 bp ATTTTTACCGCGTTGCCTACAGACGCAAAGAAATCATaGAACCAGCTAAGGCTGGGGAGAAGACTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: IFTALPTDAKKS*NQLRLGRRLLP
Trigger: TGGGAGGAGTCTTCTCCCCAGCCTTAGCTGGTTTCATGATTTCTTTGCGTCTGTAGGCAACGCGGTAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553555.5
ENST00000556296.1
ENST00000557159.5
CDS GCA 72 bp GCGTTAACTATAGACCCAACGAAAGCCTACGGTTCCTaGGACTTCTTCACAAACCCCTGCAAAAATGAGTCG +
Preference number: 6 (lower is better)
Translates to: ALTIDPTKAYGS*DFFTNPCKNES
Trigger: CGACTCATTTTTGCAGGGGTTTGTGAAGAAGTCGCAGGAACCGTAGGCTTTCGTTGGGTCTATAGTTAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555306.5
ENST00000557159.5
CDS TCA 72 bp TCAGCTGGTAGTTTGTTCTCTGAACATTTGGTCTCTTaGAGGCACAGTATATCTGGGGCTTCTTCCTTTACC +
Preference number: 6 (lower is better)
Translates to: SAGSLFSEHLVS*RHSISGASSFT
Trigger: GGTAAAGGAAGAAGCCCCAGATATACTGTGCCTTCAAGAGACCAAATGTTCAGAGAACAAACTACCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000216714.8
ENST00000398030.8
ENST00000438886.1
ENST00000553555.5
ENST00000553681.5
ENST00000554813.5
ENST00000555306.5
ENST00000555414.5
ENST00000555839.5
ENST00000556054.5
ENST00000557150.5
ENST00000557159.5
ENST00000557181.5
ENST00000557344.5
ENST00000557365.1
ENST00000557592.5