RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APEH (Homo sapiens)

Ensembl gene IDs: ENSG00000164062

Ensembl transcript IDs: ENST00000296456.10, ENST00000438011.5, ENST00000442186.5, ENST00000446089.5, ENST00000447436.5, ENST00000447541.5, ENST00000449966.5, ENST00000457042.1, ENST00000462439.5, ENST00000463616.1, ENST00000463995.5, ENST00000469362.6, ENST00000480772.1, ENST00000482301.1, ENST00000483715.5, ENST00000491799.5

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGGGGTGGCTGTAGCACCCGGATGCCCCAGTGGATGTCGGGAATaGGCTCGGCCTCCTCCAGGGACACCCACAACACTGACTGCTCCT +
Preference number: 1 (lower is better)
Translates to: LGVAVAPGCPSGCRE*ARPPPGTPTTLTAP
Trigger: AGGAGCAGTCAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACTGGGGCATCCGGGTGCTACAGCCACCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR TCA 90 bp CGCACCAGTCAGGGATGTCAGTGGAGCCCAACATGGAGGCGATGTTaGTCACGGGGTTCCGGGCCACGCAGGCCCTGTAGGTCTCTGGGT +
Preference number: 1 (lower is better)
Translates to: RTSQGCQWSPTWRRC*SRGSGPRRPCRSLG
Trigger: ACCCAGAGACCTACAGGGCCTGCGTGGCCCGGAACCCCGTGATCAACATCGCCTCCATGTTGGGCTCCACTGACATCCCTGACTGGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR CCA 90 bp ACATTCTCTTGCTCTGGGGGTGGCTGTAGCACCCGGATGCCCCAGTaGATGTCGGGAATGGGCTCGGCCTCCTCCAGGGACACCCACAAC +
Preference number: 1 (lower is better)
Translates to: TFSCSGGGCSTRMPQ*MSGMGSASSRDTHN
Trigger: GTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACTGGGGCATCCGGGTGCTACAGCCACCCCCAGAGCAAGAGAATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR GCA 90 bp CATACTGCACATTCTCTTGCTCTGGGGGTGGCTGTAGCACCCGGATaGCCCAGTGGATGTCGGGAATGGGCTCGGCCTCCTCCAGGGACA +
Preference number: 1 (lower is better)
Translates to: HTAHSLALGVAVAPG*PSGCREWARPPPGT
Trigger: TGTCCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACTGGGGCATCCGGGTGCTACAGCCACCCCCAGAGCAAGAGAATGTGCAGTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR GCA 90 bp GACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATaGCACCAGCCCACAAACACCACACCAGCATCTCCAGGGGCCCAA +
Preference number: 1 (lower is better)
Translates to: DLRLVQKRMPNRKGS*HQPTNTTPASPGAQ
Trigger: TTGGGCCCCTGGAGATGCTGGTGTGGTGTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR CCA 90 bp CTGCCACACCCAGAACCTAGGGTCTCTGCACCCCAGAGTGGGAGGTaGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGC +
Preference number: 1 (lower is better)
Translates to: LPHPEPRVSAPQSGR*GWGWFGTKYQQEPG
Trigger: GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACTCTGGGGTGCAGAGACCCTAGGTTCTGGGTGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CCA 90 bp CACCCAGAACCTAGGGTCTCTGCACCCCAGAGTGGGAGGTGGGGTTaGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTG +
Preference number: 1 (lower is better)
Translates to: HPEPRVSAPQSGRWG*GWFGTKYQQEPGSV
Trigger: CACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACTCTGGGGTGCAGAGACCCTAGGTTCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CCA 90 bp TCTGATGGGCGATTTGTCCAGCATCTCAGCCCACACGCTGAGGTCTaGCAGGCAGTCACTGCTGAAAGGAAAGCCAGCCTCCACCACGCA +
Preference number: 1 (lower is better)
Translates to: SDGRFVQHLSPHAEV*QAVTAERKASLHHA
Trigger: TGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAGTGACTGCCTGCCAGACCTCAGCGTGTGGGCTGAGATGCTGGACAAATCGCCCATCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR GCA 90 bp CCACTCTCTGGCTGTCAGCTGACCAGCATCCCAAAGGCAGAAGGCTaGAGTAGATCCCAGAGAAGTTCTCTCCCAGCTGCCGAGGCACAA +
Preference number: 1 (lower is better)
Translates to: PLSGCQLTSIPKAEG*SRSQRSSLPAAEAQ
Trigger: TTGTGCCTCGGCAGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGCTGGTCAGCTGACAGCCAGAGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR CCA 90 bp GATGTTGATCACGGGGTTCCGGGCCACGCAGGCCCTGTAGGTCTCTaGGTACTGACCAATCAAGTGGCAGGAAATGAAGCCACCATGGGA +
Preference number: 1 (lower is better)
Translates to: DVDHGVPGHAGPVGL*VLTNQVAGNEATMG
Trigger: TCCCATGGTGGCTTCATTTCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGGGCCTGCGTGGCCCGGAACCCCGTGATCAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR TCA 90 bp CTTGGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTaGCGTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGC +
Preference number: 1 (lower is better)
Translates to: LGLASSAWLSHHRWH*RPRLWSERRTRPWG
Trigger: GCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR GCA 90 bp GGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTaGCACATACAACAAGTGTGTCTCCGAGTGCGACCAGGACAGGCA +
Preference number: 1 (lower is better)
Translates to: GFGLKEGLGLGALLL*HIQQVCLRVRPGQA
Trigger: TGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR CCA 90 bp GTCATACAGGCACAGCTGGCTGCATTGGTGATGGGGGATCAGAGATaGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGCCG +
Preference number: 1 (lower is better)
Translates to: VIQAQLAALVMGDQR*VLQVDNATLVWAQP
Trigger: CGGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCCCATCACCAATGCAGCCAGCTGTGCCTGTATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR TCA 90 bp CTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGCTTTGGTCTaGAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCCACATAC +
Preference number: 1 (lower is better)
Translates to: LAISSSLALTSKALV*KKDSALGRFFSATY
Trigger: GTATGTGGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR GCA 90 bp TACTCTTGGGAAGGGTGGTACAGAGTAGTTGCTAATGGAAGGGGCTaGAGCAGGGAAGCTAGGCTGGTACAGAGTCCTGGTTGCCAGGAC +
Preference number: 1 (lower is better)
Translates to: YSWEGWYRVVANGRG*SREARLVQSPGCQD
Trigger: GTCCTGGCAACCAGGACTCTGTACCAGCCTAGCTTCCCTGCTGCAGCCCCTTCCATTAGCAACTACTCTGTACCACCCTTCCCAAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR GCA 90 bp TTCCCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTaGCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTC +
Preference number: 1 (lower is better)
Translates to: FPNQGNVPGTTFAHG*RGKTGPHTSPPDIL
Trigger: GAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CCA 90 bp GCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTaGGAAGGGTGGTACAGAGTAGTTGCTAATGGAAGGGGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: AVERQGLTLVLQTYS*EGWYRVVANGRGCS
Trigger: GCTGCAGCCCCTTCCATTAGCAACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CCA 90 bp TGGCAGGAAATGAAGCCACCATGGGAACCACCCATAAGGGCCACATaGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCA +
Preference number: 1 (lower is better)
Translates to: WQEMKPPWEPPIRAT*LASKCSSWSTCSTA
Trigger: TGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR TCA 90 bp AGAGAAGTTCTCTCCCAGCTGCCGAGGCACAACATCTACCACCACTaGGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGCTGCA +
Preference number: 1 (lower is better)
Translates to: REVLSQLPRHNIYHH*GNLGIPVIQAQLAA
Trigger: TGCAGCCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCCTCGGCAGCTGGGAGAGAACTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR TCA 90 bp GCCAAAGCAGTCATCCTCATAAACAGGCCCATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAGCTTCCGGTTCTTCTCCCAGACCTC +
Preference number: 1 (lower is better)
Translates to: AKAVILINRPMFLQR*QVEALELPVLLPDL
Trigger: GAGGTCTGGGAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACATGGGCCTGTTTATGAGGATGACTGCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447436.5
3UTR GCA 90 bp GGAAATGAAGCCACCATGGGAACCACCCATAAGGGCCACATGGCTTaGATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTG +
Preference number: 1 (lower is better)
Translates to: GNEATMGTTHKGHMA*IKVFLLEHLFHCKL
Trigger: CAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp CCCACATTGCCTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTGGAGCCAAGTGGATGTCGGGAATaGGCTCGGCCTCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: PTLPGRERMLSWPKPVEPSGCRE*ARPPPG
Trigger: CCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACT...TGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR TCA 90 bp CACAGTGCCCACTTGGGTGTCCACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCAGCTGGCTGCATTGGTaGTGGGGGATCAGAGATGGG +
Preference number: 2 (lower is better)
Translates to: HSAHLGVHSKQVLPAALSSWLHW*WGIRDG
Trigger: CCCATCTCTGATCCCCCATCACCAATGCAGCCAGCT...GCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR CCA 90 bp ATGTCAGTGGAGCCCAACATGGAGGCGATGTTGATCACGGGGTTCCGGGCCACGACCCGGATGCCCCAGTaGATGTCGGGAATGGGCTCG +
Preference number: 2 (lower is better)
Translates to: MSVEPNMEAMLITGFRATTRMPQ*MSGMGS
Trigger: CGAGCCCATTCCCGACATCCACTGGGGCATCCGGGT...CGTGGCCCGGAACCCCGTGATCAACATCGCCTCCATGTTGGGCTCCACTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp GGCCCACATTGCCTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTGGAGCACCACCATGGGCACTTaGGTCTTATCTGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: GPHCLGGRGCCPGQSPWSTTMGT*VLSGGL
Trigger: CAGCCCTCCAGATAAGACCCAAGTGCCCATGGTGGT...GCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR GCA 90 bp CACAGTGCCCACTTGGGTGTCCACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCTGACCTGCGATTGGTaGAAAAGCGGATGCCCAACC +
Preference number: 2 (lower is better)
Translates to: HSAHLGVHSKQVLPAALSLTCDW*KSGCPT
Trigger: GGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAG...GCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp CCCACATTGCCTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTGGAGCCATCTTATCTGGAGGGCTaGCAGGCTGCAGCAGGATTG +
Preference number: 2 (lower is better)
Translates to: PTLPGRERMLSWPKPVEPSYLEG*QAAAGL
Trigger: CAATCCTGCTGCAGCCTGGCAGCCCTCCAGATAAGA...TGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR GCA 90 bp ACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCAAGTGTGTCTCCGAGTaGGACCAGGACAGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: TCDWCKSGCPTGRAHATSKCVSE*DQDRQP
Trigger: TGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTT...GCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp CCCACATTGCCTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTGGAGCCACCGCAAAGCCCATCTTaGAAAGCATGGCTGGGAACA +
Preference number: 2 (lower is better)
Translates to: PTLPGRERMLSWPKPVEPPQSPS*KAWLGT
Trigger: TGTTCCCAGCCATGCTTTGCAAGATGGGCTTTGCGG...TGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp CTGCTGAAAGGAAAGCCAGCCTCCACCACGCACCAGTCAGGGATGTCAGTGGAGGTGGCCCACATTGCCTaGGAGGGAGAGGATGCTGTC +
Preference number: 2 (lower is better)
Translates to: LLKGKPASTTHQSGMSVEVAHIA*EGEDAV
Trigger: GACAGCATCCTCTCCCTCCCAGGCAATGTGGGCCAC...CTCCACTGACATCCCTGACTGGTGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR TCA 90 bp AGGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCATCATCGCTGGCACTaGCGTCCAAGGCTTTGGTCT +
Preference number: 2 (lower is better)
Translates to: RADLRLVQKRMPNRKGSCHHRWH*RPRLWS
Trigger: AGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATG...GCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp GAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTAGCCTCCTGCTGCCCTaGCAGACCGTTGAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: EVGLGMVWYKVPAGTRLCSLLLP*QTVELL
Trigger: GAGGAGCTCAACGGTCTGGCAGGGCAGCAGGAGGCT...ACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR GCA 90 bp ACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCTGGTGCAAAAGCGGATaGCCAACCGGAAGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: TCDWCKSGCPTGRAHATSWCKSG*PTGRAH
Trigger: ATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCA...GCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR GCA 90 bp CACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAGTCAAAGACCACTCTCTGCTGACCTGCGATTGGTaGAAAAGCGGATGCCCAACC +
Preference number: 2 (lower is better)
Translates to: HSKQVLPAALSRVKDHSLLTCDW*KSGCPT
Trigger: GGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAG...CAGAGAGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp CTGCAAACTGGACATCCTTCACATCCTGGTGGCCCACATTGCCTGGGAGGGAGAGCTGTAGCACCCGGATaGCCCAGTGGATGTCGGGAA +
Preference number: 2 (lower is better)
Translates to: LQTGHPSHPGGPHCLGGRAVAPG*PSGCRE
Trigger: TTCCCGACATCCACTGGGGCATCCGGGTGCTACAGC...TCTCCCTCCCAGGCAATGTGGGCCACCAGGATGTGAAGGATGTCCAGTTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp GTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGCCCACGCATCCGTaGAGTCCAGAGCCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: VGGGVGDGLVQSTSRNQALPTHP*SPEPRK
Trigger: CTTTCTGGGCTCTGGACTCCACGGATGCGTGGGCAG...AGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp GCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACCTGGCTTCTTCAGCCTaGCTATCTCATCATCGCTGG +
Preference number: 2 (lower is better)
Translates to: AIGAKADAQPEGLMPPAHLASSA*LSHHRW
Trigger: CCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAG...GTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp GAGCCGAGTCAAAGACCACTCTCTGGCTGTCAGCTGACCAGCATCCCAAAGGCAAAGTGTGTCTCCGAGTaGGACCAGGACAGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: EPSQRPLSGCQLTSIPKAKCVSE*DQDRQP
Trigger: TGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTT...TGCCTTTGGGATGCTGGTCAGCTGACAGCCAGAGAGTGGTCTTTGACTCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp GCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACGGGGCGCTTCTTCTCTaGCACATACAACAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: AIGAKADAQPEGLMPPAHGALLL*HIQQVC
Trigger: ACACACTTGTTGTATGTGGCAGAGAAGAAGCGCCCC...GTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp GCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACGCACAGCTTTCATGGTaGCTGAAGGAGACTCTCTGC +
Preference number: 2 (lower is better)
Translates to: ADLRLVQKRMPNRKGSCHAQLSW*LKETLC
Trigger: GCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGC...GTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
3UTR-3UTR CCA 90 bp CCAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGCAGATGAAGCCCTTGTaGCTGCCACACCCAGAACCT +
Preference number: 2 (lower is better)
Translates to: PGQAEAKPLTVPSLLTLEQMKPL*LPHPEP
Trigger: AGGTTCTGGGTGTGGCAGCCACAAGGGCTTCATCTG...CTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp CCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGGCAGGGAAGCTAGGCTaGTACAGAGTCCTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: PNQGNVPGTTFAHGCRGKAGKLG*YRVLVA
Trigger: GGCAACCAGGACTCTGTACCAGCCTAGCTTCCCTGC...CTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp TCACTGCTGAAAGGAAAGCCAGCCTCCACCACGCACCAGTCAGGGATGTCAGTGTCCTTCACATCCTGGTaGCCCACATTGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SLLKGKPASTTHQSGMSVSFTSW*PTLPGR
Trigger: CCTCCCAGGCAATGTGGGCCACCAGGATGTGAAGGA...CACTGACATCCCTGACTGGTGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp ATGTCAGTGGAGCCCAACATGGAGGCGATGTTGATCACGGGGTTCCGGGCCACGGAAATGAAGCCACCATaGGAACCACCCATAAGGGCC +
Preference number: 2 (lower is better)
Translates to: MSVEPNMEAMLITGFRATEMKPP*EPPIRA
Trigger: GGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTC...CGTGGCCCGGAACCCCGTGATCAACATCGCCTCCATGTTGGGCTCCACTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR CAA 90 bp AGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACTCCTaGCTAGGGCTCGGGTGGCTTGAGCCCAGCACACCCTGGGCTAGG +
Preference number: 2 (lower is better)
Translates to: RCFLAFASRKCVSDS*LGLGWLEPSTPWAR
Trigger: CCTAGCCCAGGGTGTGCTGGGCTCAAGCCACCCGAGCCCTAGCAAGGAGTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR TCA 90 bp ATGCCACCAGCCCACAAACACCACACCAGCATCTCCAGGGGCCCAAAATGCCTTCATCATCGCTGGCACTaGCGTCCAAGGCTTTGGTCT +
Preference number: 2 (lower is better)
Translates to: MPPAHKHHTSISRGPKCLHHRWH*RPRLWS
Trigger: AGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATG...AAGGCATTTTGGGCCCCTGGAGATGCTGGTGTGGTGTTTGTGGGCTGGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp GGCTGTCAGCTGACCAGCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGATGGTGCAAAAGCGGATaGCCAACCGGAAGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: GCQLTSIPKAEGCSRSQRWCKSG*PTGRAH
Trigger: ATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCA...TCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGCTGGTCAGCTGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR GCA 90 bp GGCTGTCAGCTGACCAGCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGACTGACCTGCGATTGGTaGAAAAGCGGATGCCCAACC +
Preference number: 2 (lower is better)
Translates to: GCQLTSIPKAEGCSRSQRLTCDW*KSGCPT
Trigger: GGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAG...TCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGCTGGTCAGCTGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR GCA 90 bp GGCTGCGCTGAGCCGAGTCAAAGACCACTCTCTGGCTGTCAGCTGACCAGCATCCCAAAGGCAGAAGGCTaGAGTAGATCCCAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: GCAEPSQRPLSGCQLTSIPKAEG*SRSQRS
Trigger: ACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGG...GATGCTGGTCAGCTGACAGCCAGAGAGTGGTCTTTGACTCGGCTCAGCGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp GTAGGTCTCTGGGTACTGACCAATCAAGTGGCAGGAAATGAAGCCACCATGGGACTGGGAGGGAGAGGATaGTGTCCTGGCCAAAGCCCG +
Preference number: 2 (lower is better)
Translates to: VGLWVLTNQVAGNEATMGLGGRG*CPGQSP
Trigger: CGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAG...TCCCATGGTGGCTTCATTTCCTGCCACTTGATTGGTCAGTACCCAGAGACCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp AGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCCTCAAGAGCGAAGTGTaGCACAGGCTGATCAGCTCA +
Preference number: 2 (lower is better)
Translates to: RQCPWDYFCPWVPWKDRALKSEV*HRLISS
Trigger: TGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAG...GGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp CCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGCCTCCCTTCTCACACTaGAGGCAGATGAAGCCCTTG +
Preference number: 2 (lower is better)
Translates to: PNQGNVPGTTFAHGCRGKPPFSH*RQMKPL
Trigger: CAAGGGCTTCATCTGCCTCCAGTGTGAGAAGGGAGG...CTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp AGGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCTTGATGGCTTGGTCTaGCTTCTTCAGCCTGGCTAT +
Preference number: 2 (lower is better)
Translates to: RADLRLVQKRMPNRKGSCLDGLV*LLQPGY
Trigger: ATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAG...GCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR CCA 90 bp ACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCAATGCCTTGATGGCTTaGTCTGGCTTCTTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TCDWCKSGCPTGRAHATSNALMA*SGFFSL
Trigger: CAGGCTGAAGAAGCCAGACCAAGCCATCAAGGCATT...GCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR TCA 90 bp CAGGAAATGAAGCCACCATGGGAACCACCCATAAGGGCCACATGGCTTGCATCAGGACACCCACAACACTaGCTGCTCCTTCCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: QEMKPPWEPPIRATWLASGHPQH*LLLPCR
Trigger: TCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGTGTCC...TGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR TCA 90 bp TCACTGCTGAAAGGAAAGCCAGCCTCCACCACGCACCAGTCAGGGATGTCAGTGTCAAGTGGCAGGAAATaGAGCCACCATGGGAACCAC +
Preference number: 2 (lower is better)
Translates to: SLLKGKPASTTHQSGMSVSSGRK*SHHGNH
Trigger: GTGGTTCCCATGGTGGCTTCATTTCCTGCCACTTGA...CACTGACATCCCTGACTGGTGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR GCA 90 bp GCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGAAGTTCTCTCCCAGCTGTCCAGGGGCCCAAAATaGCTTGATGGCTTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: ASQRQKAAVDPREVLSQLSRGPK*LDGLVW
Trigger: CCAGACCAAGCCATCAAGGCATTTTGGGCCCCTGGA...CAGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp ACCGCAAAGCCCATCTTGCAAAGCATGGCTGGGAACAGCATCCAGGCAGTGACAACCCACAACACTGACTaGTCCTTCCCTGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: TAKPILQSMAGNSIQAVTTHNTD*SFPAEG
Trigger: GCCTTCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGT...TGTCACTGCCTGGATGCTGTTCCCAGCCATGCTTTGCAAGATGGGCTTTGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR GCA 90 bp GTCACTGCTGAAAGGAAAGCCAGCCTCCACCACGCACCAGTCAGGGATGTCAGTAGGCTGCAGCAGGATTaGTTCAAAGTCAAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: VTAERKASLHHAPVRDVSRLQQD*FKVKAS
Trigger: GCTGGCCTTGACTTTGAAGCAATCCTGCTGCAGCCT...ACTGACATCCCTGACTGGTGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp ACCATGGGAACCACCCATAAGGGCCACATGGCTTGCATCAAAGTGTTCCTCCTGCACTTGGGTCTTATCTaGAGGGCTGCCAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: TMGTTHKGHMACIKVFLLHLGLI*RAARLQ
Trigger: CTGCAGCCTGGCAGCCCTCCAGATAAGACCCAAGTG...CAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp TGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTGGACAGAGAGGATGCTGTCCTaGCCAAAGCCCGTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: WLASKCSSWSTCSTANWTERMLS*PKPVEP
Trigger: TGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTC...TGTCCAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR TCA 90 bp TCTGCCACATACAACAAGTGTGTCTCCGAGTGCGACCAGGACAGGCAGCCAAAGTCCAAGGCTTTGGTCTaGAAGAAGGACTCGGCCTTG +
Preference number: 2 (lower is better)
Translates to: SATYNKCVSECDQDRQPKSKALV*KKDSAL
Trigger: CAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGA...CTTTGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp GAGCCGAGTCAAAGACCACTCTCTGGCTGTCAGCTGACCAGCATCCCAAAGGCAAATACAGGGCTGACCTaGGATTGGTGCAAAAGCGGA +
Preference number: 2 (lower is better)
Translates to: EPSQRPLSGCQLTSIPKANTGLT*DWCKSG
Trigger: TCCGCTTTTGCACCAATCGCAGGTCAGCCCTGTATT...TGCCTTTGGGATGCTGGTCAGCTGACAGCCAGAGAGTGGTCTTTGACTCGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR GCA 90 bp CCTGTAGGTCTCTGGGTACTGACCAATCAAGTGGCAGGAAATGAAGCCACCATGGGAGGGCTGCCAGGCTaGAGCAGGATTGCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: PVGLWVLTNQVAGNEATMGGLPG*SRIASK
Trigger: CTTTGAAGCAATCCTGCTGCAGCCTGGCAGCCCTCC...CATGGTGGCTTCATTTCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CCA 90 bp GGGGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGCTGGCTTCTTCAGCCTaGCTATCTCATCATCGCTGG +
Preference number: 2 (lower is better)
Translates to: GDQRWVLQVDNATLVWAQLASSA*LSHHRW
Trigger: CCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAG...CTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR TCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTAAGTGTGGCACAGGCTaGTCAGCTCATGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSKCGTG*SAHAEW
Trigger: CCATTCTGCATGAGCTGATCAGCCTGTGCCACACTT...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR TCA 90 bp GTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGGCCCTGCCAGACCGTTaGGCTCCTCAAGAGCGAAGT +
Preference number: 2 (lower is better)
Translates to: VLIYYDYIAHIPLPTHPWALPDR*APQERS
Trigger: ACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGGC...CCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR GCA 90 bp TCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGCTGTCCAGGGGCCCAAAATaGCTTGATGGCTTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: STTTEVTLVYQSYRHSWLSRGPK*LDGLVW
Trigger: CCAGACCAAGCCATCAAGGCATTTTGGGCCCCTGGA...CAGCCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR GCA 90 bp GGCACAACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAACCGGAAGGGCTCATaGCACCAGCCCACAAACACC +
Preference number: 2 (lower is better)
Translates to: GTTSTTTEVTLVYQSYRHNRKGS*HQPTNT
Trigger: GGTGTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTT...GTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR GCA 90 bp GGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGCCAATACAGGGCTGACCTaGGATTGGTGCAAAAGCGGA +
Preference number: 2 (lower is better)
Translates to: GSEMGTAGRQCDIGLGSANTGLT*DWCKSG
Trigger: TCCGCTTTTGCACCAATCGCAGGTCAGCCCTGTATT...GGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR GCA 90 bp GCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGAAGTTCTCTCCCAGCTGACTGCAGGTAGACAATaGGACATTGGTCTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: ASQRQKAAVDPREVLSQLTAGRQ*DIGLGS
Trigger: TGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGT...CAGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR CCA 90 bp ACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGCTGCATAATGCGACATTGGTCTaGGCTCAGCCGGGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: TTTEVTLVYQSYRHSWLHNATLV*AQPGRR
Trigger: TCTTCTCCCCGGCTGAGCCCAGACCAATGTCGCATT...ATGCAGCCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR CCA 90 bp GGTCTCTGGGTACTGACCAATCAAGTGGCAGGAAATGAAGCCACCATGGGAACCCTTGCAAAGCATGGCTaGGAACAGCATCCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: GLWVLTNQVAGNEATMGTLAKHG*EQHPGS
Trigger: ACTGCCTGGATGCTGTTCCCAGCCATGCTTTGCAAG...GGTTCCCATGGTGGCTTCATTTCCTGCCACTTGATTGGTCAGTACCCAGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR TCA 90 bp CTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACTCCTTGCACACTGGAGGCAGATaGAGCCCTTGTGGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LYRCFLAFASRKCVSDSLHTGGR*SPCGCH
Trigger: GTGGCAGCCACAAGGGCTTCATCTGCCTCCAGTGTG...CAAGGAGTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR TCA 90 bp AGCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGAAGTTCTCTCCCAGCTATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAG +
Preference number: 2 (lower is better)
Translates to: SIPKAEGCSRSQRSSLPAMFLQR*QVEALE
Trigger: CTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACAT...AGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447436.5
3UTR-3UTR GCA 90 bp CTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACTCCTTGCAGAAAGCCTCCTGCTaGCCTGCCAGACCGTTGAGC +
Preference number: 2 (lower is better)
Translates to: LYRCFLAFASRKCVSDSLQKASC*PARPLS
Trigger: GCTCAACGGTCTGGCAGGGCAGCAGGAGGCTTTCTG...CAAGGAGTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTGGGTTGGGGATGGTTTaGTACAAAGTACCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSGLGMV*YKVPAG
Trigger: TCCTGCTGGTACTTTGTACCAAACCATCCCCAACCC...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp AGCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGAAGTTCTCTCCCAGCTAATGCCTTGATGGCTTaGTCTGGCTTCTTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SIPKAEGCSRSQRSSLPANALMA*SGFFSL
Trigger: CAGGCTGAAGAAGCCAGACCAAGCCATCAAGGCATT...AGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR CCA 90 bp GGGGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGGCACAGGGATGCTTTTaGAAACCATGTTTTCTCCCC +
Preference number: 2 (lower is better)
Translates to: GDQRWVLQVDNATLVWAQAQGCF*KPCFLP
Trigger: GGGGAGAAAACATGGTTTCCAAAAGCATCCCTGTGC...CTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447541.5
3UTR-3UTR GCA 90 bp TCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGCTGCAAGCACAGAGATGTTaGCACTCTCGACATCCAGCA +
Preference number: 2 (lower is better)
Translates to: STTTEVTLVYQSYRHSWLQAQRC*HSRHPA
Trigger: TGCTGGATGTCGAGAGTGGCAACATCTCTGTGCTTG...CAGCCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447541.5
3UTR-3UTR CCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTTTGCTAGGGCTCGGGTaGCTTGAGCCCAGCACACCC +
Preference number: 2 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSLLGLG*LEPSTP
Trigger: GGGTGTGCTGGGCTCAAGCCACCCGAGCCCTAGCAA...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp AGCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGAAGTTCTCTCCCAGCTATGGGGGATCAGAGATaGGTACTGCAGGTAGACAAT +
Preference number: 2 (lower is better)
Translates to: SIPKAEGCSRSQRSSLPAMGDQR*VLQVDN
Trigger: ATTGTCTACCTGCAGTACCCATCTCTGATCCCCCAT...AGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR CCA 90 bp CTCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGGCTGGTACAGAGTCCTaGTTGCCAGGACAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LFMPVQMLLSLCFQEMCQAGTES*LPGQAE
Trigger: CTCTGCCTGTCCTGGCAACCAGGACTCTGTACCAGC...CTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CCA 90 bp CTCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGCCAAGGCAATGTCCCTaGGACTACTTTTGCCCATGG +
Preference number: 2 (lower is better)
Translates to: LFMPVQMLLSLCFQEMCQPRQCP*DYFCPW
Trigger: CCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGG...CTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR TCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTATGTCCTAATTTATTATaGCTACATAGCCCACATTCC +
Preference number: 2 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVCPNLL*LHSPHS
Trigger: GGAATGTGGGCTATGTAGTCATAATAAATTAGGACA...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CCA 72 bp GCTGTAGCACCCGGATGCCCCAGTGGATGTCGGGAATaGGCTCGGCCTCCTCCAGGGACACCCACAACACTG +
Preference number: 3 (lower is better)
Translates to: AVAPGCPSGCRE*ARPPPGTPTTL
Trigger: CAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACTGGGGCATCCGGGTGCTACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR TCA 72 bp CAGGGATGTCAGTGGAGCCCAACATGGAGGCGATGTTaGTCACGGGGTTCCGGGCCACGCAGGCCCTGTAGG +
Preference number: 3 (lower is better)
Translates to: QGCQWSPTWRRC*SRGSGPRRPCR
Trigger: CCTACAGGGCCTGCGTGGCCCGGAACCCCGTGATCAACATCGCCTCCATGTTGGGCTCCACTGACATCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR GCA 72 bp CATTCTCTTGCTCTGGGGGTGGCTGTAGCACCCGGATaGCCCAGTGGATGTCGGGAATGGGCTCGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: HSLALGVAVAPG*PSGCREWARPP
Trigger: AGGAGGCCGAGCCCATTCCCGACATCCACTGGGGCATCCGGGTGCTACAGCCACCCCCAGAGCAAGAGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CAA 90 bp CACAGTGCCCACTTGGGTGTCCACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCGTAGACAATGCGACATaGGTCTGGGCTCAGCCGGGG +
Preference number: 3 (lower is better)
Translates to: HSAHLGVHSKQVLPAALSVDNAT*VWAQPG
Trigger: CCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTAC...GCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR CAA 90 bp GGCCCACATTGCCTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTGGAGCCAGGCTGCAGCAGGATaGCTTCAAAGTCAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: GPHCLGGRGCCPGQSPWSQAAAG*LQSQGQ
Trigger: CTGGCCTTGACTTTGAAGCAATCCTGCTGCAGCCTG...GCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CAA 90 bp GTTGATCACGGGGTTCCGGGCCACGCAGGCCCTGTAGGTCTCTGGGTACTGACCGACCACCATGGGCACTaGGGTCTTATCTGGAGGGCT +
Preference number: 3 (lower is better)
Translates to: VDHGVPGHAGPVGLWVLTDHHGH*GLIWRA
Trigger: AGCCCTCCAGATAAGACCCAAGTGCCCATGGTGGTC...GGTCAGTACCCAGAGACCTACAGGGCCTGCGTGGCCCGGAACCCCGTGATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR GCA 72 bp AGACCTCCAGGAACTGCTTCTCTTCCCCAGGGCCCGTaGCTCCAGCCTTGCGCAGCACAGCTTTCATGGTGC +
Preference number: 3 (lower is better)
Translates to: RPPGTASLPQGP*LQPCAAQLSWC
Trigger: GCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGGGCCCTGGGGAAGAGAAGCAGTTCCTGGAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
3UTR-3UTR CAA 90 bp ACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCAGGGCTGACCTGCGATaGGTGCAAAAGCGGATGCCC +
Preference number: 3 (lower is better)
Translates to: TCDWCKSGCPTGRAHATSRADLR*VQKRMP
Trigger: GGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT...GCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR CCA 72 bp CACGGGGTTCCGGGCCACGCAGGCCCTGTAGGTCTCTaGGTACTGACCAATCAAGTGGCAGGAAATGAAGCC +
Preference number: 3 (lower is better)
Translates to: HGVPGHAGPVGL*VLTNQVAGNEA
Trigger: GGCTTCATTTCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGGGCCTGCGTGGCCCGGAACCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR CCA 72 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTaGCACAGGCTGATCAGCTCATGCAGAATGGCAGGG +
Preference number: 3 (lower is better)
Translates to: PCQTVELLKSEV*HRLISSCRMAG
Trigger: CCCTGCCATTCTGCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CAA 90 bp CCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGGGTACAGAGTCCTGGTaGCCAGGACAGGCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: PNQGNVPGTTFAHGCRGKGTESW*PGQAEA
Trigger: AGCCTCTGCCTGTCCTGGCAACCAGGACTCTGTACC...CTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CAA 90 bp TTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACAAACTCCAGCGCTGACAGGTaGAAGCTCTTGAGCTTCCGG +
Preference number: 3 (lower is better)
Translates to: LVQKRMPNRKGSCHQPTNSSADR*KLLSFR
Trigger: CCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGA...GTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
3UTR-3UTR CAA 90 bp GAGCCGAGTCAAAGACCACTCTCTGGCTGTCAGCTGACCAGCATCCCAAAGGCAGGGGCCCAAAATGCCTaGATGGCTTGGTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: EPSQRPLSGCQLTSIPKAGAQNA*MAWSGF
Trigger: GAAGCCAGACCAAGCCATCAAGGCATTTTGGGCCCC...TGCCTTTGGGATGCTGGTCAGCTGACAGCCAGAGAGTGGTCTTTGACTCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR CAA 90 bp AGGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCGACAGGTTGAAGCTCTaGAGCTTCCGGTTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: RADLRLVQKRMPNRKGSCDRLKL*SFRFFS
Trigger: GGAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTC...GCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
3UTR GCA 72 bp CTTCCCCAACCAAGGCAATGTCCCTGGGACTACTTTTaGCCATGGGTGCCGTGGAAAGACAGGGCCTCACAC +
Preference number: 3 (lower is better)
Translates to: LPQPRQCPWDYF*PWVPWKDRASH
Trigger: GTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR GCA 72 bp TTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATaGCACCAGCCCACAAACACCACACCAGCATCTCCA +
Preference number: 3 (lower is better)
Translates to: LVQKRMPNRKGS*HQPTNTTPASP
Trigger: TGGAGATGCTGGTGTGGTGTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR GCA 72 bp AATACAGGGCTGACCTGCGATTGGTGCAAAAGCGGATaGCCAACCGGAAGGGCTCATGCCACCAGCCCACAA +
Preference number: 3 (lower is better)
Translates to: NTGLTCDWCKSG*PTGRAHATSPQ
Trigger: TTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCTGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR CCA 72 bp CCTAGGGTCTCTGCACCCCAGAGTGGGAGGTGGGGTTaGGGATGGTTTGGTACAAAGTACCAGCAGGAACCA +
Preference number: 3 (lower is better)
Translates to: PRVSAPQSGRWG*GWFGTKYQQEP
Trigger: TGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACTCTGGGGTGCAGAGACCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CCA 72 bp GTGGGGCATGACCACCATGGGCACTTGGGTCTTATCTaGAGGGCTGCCAGGCTGCAGCAGGATTGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: VGHDHHGHLGLI*RAARLQQDCFK
Trigger: TTTGAAGCAATCCTGCTGCAGCCTGGCAGCCCTCCAGATAAGACCCAAGTGCCCATGGTGGTCATGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR CCA 72 bp CTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTaGAGCCACGATAGTTCACTAGTAGTACCGCAAAGC +
Preference number: 3 (lower is better)
Translates to: LGGRGCCPGQSP*SHDSSLVVPQS
Trigger: GCTTTGCGGTACTACTAGTGAACTATCGTGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR CCA 72 bp CGATTTGTCCAGCATCTCAGCCCACACGCTGAGGTCTaGCAGGCAGTCACTGCTGAAAGGAAAGCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: RFVQHLSPHAEV*QAVTAERKASL
Trigger: GAGGCTGGCTTTCCTTTCAGCAGTGACTGCCTGCCAGACCTCAGCGTGTGGGCTGAGATGCTGGACAAATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CAA 90 bp TTCTCTCCCAGCTGCCGAGGCACAACATCTACCACCACTGAGGTAACCTTGGTAAAGAAGGACTCGGCCTaGGGGCGCTTCTTCTCTGCC +
Preference number: 3 (lower is better)
Translates to: FSPSCRGTTSTTTEVTLVKKDSA*GRFFSA
Trigger: GGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTT...TACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCCTCGGCAGCTGGGAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR-3UTR CAA 90 bp CTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGCTTTGGTCTGGGGGCCCAAAATGCCTaGATGGCTTGGTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: LQPGYLIIAGTDVQGFGLGAQNA*MAWSGF
Trigger: GAAGCCAGACCAAGCCATCAAGGCATTTTGGGCCCC...CAGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR GCA 72 bp GATGGGGGATCAGAGATGGGTACTGCAGGTAGACAATaGGACATTGGTCTGGGCTCAGCCGGGGAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: DGGSEMGTAGRQ*DIGLGSAGEKR
Trigger: TCTCTTCTCCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR GCA 72 bp ACACATTCTCAGGGACCCCCTCAAGCACAGAGATGTTaGCACTCTCGACATCCAGCACGCAGAGCACAGGGA +
Preference number: 3 (lower is better)
Translates to: THSQGPPQAQRC*HSRHPARRAQG
Trigger: TCCCTGTGCTCTGCGTGCTGGATGTCGAGAGTGGCAACATCTCTGTGCTTGAGGGGGTCCCTGAGAATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447541.5
3UTR CCA 72 bp TGTTCCACTGCAAACTGGACATCCTTCACATCCTGGTaGCCCACATTGCCTGGGAGGGAGAGGATGCTGTCC +
Preference number: 3 (lower is better)
Translates to: CSTANWTSFTSW*PTLPGRERMLS
Trigger: GGACAGCATCCTCTCCCTCCCAGGCAATGTGGGCCACCAGGATGTGAAGGATGTCCAGTTTGCAGTGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CAA 90 bp TCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGCTGGTAGACAATGCGACATaGGTCTGGGCTCAGCCGGGG +
Preference number: 3 (lower is better)
Translates to: STTTEVTLVYQSYRHSWLVDNAT*VWAQPG
Trigger: CCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTAC...CAGCCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR TCA 72 bp TCATCATCGCTGGCACTGACGTCCAAGGCTTTGGTCTaGAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: SSSLALTSKALV*KKDSALGRFFS
Trigger: AGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR GCA 72 bp CTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTaGCACATACAACAAGTGTGTCTCCGAGTGCGACCA +
Preference number: 3 (lower is better)
Translates to: LKEGLGLGALLL*HIQQVCLRVRP
Trigger: TGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR CCA 72 bp ATCTCCAGGGGCCCAAAATGCCTTGATGGCTTGGTCTaGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGC +
Preference number: 3 (lower is better)
Translates to: ISRGPKCLDGLV*LLQPGYLIIAG
Trigger: GCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAGGCATTTTGGGCCCCTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR CCA 72 bp GCACAGCTGGCTGCATTGGTGATGGGGGATCAGAGATaGGTACTGCAGGTAGACAATGCGACATTGGTCTGG +
Preference number: 3 (lower is better)
Translates to: AQLAALVMGDQR*VLQVDNATLVW
Trigger: CCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCCCATCACCAATGCAGCCAGCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR TCA 72 bp GCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTaGCGTCCAAGGCTTTGGTCTGAAAGAAGGACTCGG +
Preference number: 3 (lower is better)
Translates to: ASSAWLSHHRWH*RPRLWSERRTR
Trigger: CCGAGTCCTTCTTTCAGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
3UTR CCA 72 bp ATGAAGCCACCATGGGAACCACCCATAAGGGCCACATaGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGT +
Preference number: 3 (lower is better)
Translates to: MKPPWEPPIRAT*LASKCSSWSTC
Trigger: ACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGTGGCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR-3UTR CAA 90 bp AGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGCCGGGGAGAACCACTGAGGTAACCTaGGTATACCAGTCATACAGG +
Preference number: 3 (lower is better)
Translates to: RWVLQVDNATLVWAQPGRTTEVT*VYQSYR
Trigger: CCTGTATGACTGGTATACCAAGGTTACCTCAGTGGT...TCTCCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
3UTR-3UTR CAA 90 bp GTAGGTCTCTGGGTACTGACCAATCAAGTGGCAGGAAATGAAGCCACCATGGGAACCGCAAAGCCCATCTaGCAAAGCATGGCTGGGAAC +
Preference number: 3 (lower is better)
Translates to: VGLWVLTNQVAGNEATMGTAKPI*QSMAGN
Trigger: GTTCCCAGCCATGCTTTGCAAGATGGGCTTTGCGGT...TCCCATGGTGGCTTCATTTCCTGCCACTTGATTGGTCAGTACCCAGAGACCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
3UTR GCA 72 bp TTCTTCTCTGCCACATACAACAAGTGTGTCTCCGAGTaGGACCAGGACAGGCAGCCAAAGCAGTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: FFSATYNKCVSE*DQDRQPKQSSS
Trigger: TGAGGATGACTGCTTTGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447436.5
3UTR CCA 72 bp CTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTaGTACAGAGTAGTTGCTAATGGAAGGGGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LTLVLQTYSWEG*YRVVANGRGCS
Trigger: GCTGCAGCCCCTTCCATTAGCAACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR TCA 72 bp GTCATCCTCATAAACAGGCCCATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAGCTTCCGGTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: VILINRPMFLQR*QVEALELPVLL
Trigger: GAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACATGGGCCTGTTTATGAGGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447436.5
3UTR CCA 72 bp AGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTaGGAAGGGTGGTACAGAGTAGTTGCTAATGGAAGG +
Preference number: 3 (lower is better)
Translates to: RQGLTLVLQTYS*EGWYRVVANGR
Trigger: CCTTCCATTAGCAACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR-3UTR CAA 90 bp CTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACTCCTTGGGGGTTGGGGATGGTTaGGTACAAAGTACCAGCAGG +
Preference number: 3 (lower is better)
Translates to: LYRCFLAFASRKCVSDSLGVGDG*VQSTSR
Trigger: CCTGCTGGTACTTTGTACCAAACCATCCCCAACCCC...CAAGGAGTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp TCTGGGGGTGGCTGTAGCACCCGGATGCCCCAGTGGATGTCGGGAATGGGCTCGCTGGGAGGGAGAGGATaGTGTCCTGGCCAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: SGGGCSTRMPQWMSGMGSLGGRG*CPGQSP
Trigger: CGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAG...CGAGCCCATTCCCGACATCCACTGGGGCATCCGGGTGCTACAGCCACCCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCGCGCTCAGCGCGGGCTaGCGGCTAAGGCCCCGATAC +
Preference number: 4 (lower is better)
Translates to: PCQTVELLKSEVWHRLISALSAG*RLRPRY
Trigger: GTATCGGGGCCTTAGCCGCCAGCCCGCGCTGAGCGC...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp TGTAGCACCCGGATGCCCCAGTGGATGTCGGGAATGGGCTCGGCCTCCTCCAGGACAGGTCCTGCCGGCTaGGCTGAGCCGAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CSTRMPQWMSGMGSASSRTGPAG*AEPSQR
Trigger: TCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGT...CCTGGAGGAGGCCGAGCCCATTCCCGACATCCACTGGGGCATCCGGGTGCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp GGTGGCTGTAGCACCCGGATGCCCCAGTGGATGTCGGGAATGGGCTCGGCCTCCTCCTTCACATCCTGGTaGCCCACATTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGCSTRMPQWMSGMGSASSFTSW*PTLPGR
Trigger: CCTCCCAGGCAATGTGGGCCACCAGGATGTGAAGGA...GGAGGCCGAGCCCATTCCCGACATCCACTGGGGCATCCGGGTGCTACAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp CCGGGCCACGCAGGCCCTGTAGGTCTCTGGGTACTGACCAATCAAGTGGCAGGATCTCAGCCCACACGCTaGGGTCTGGCAGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PGHAGPVGLWVLTNQVAGSQPTR*GLAGSH
Trigger: GTGACTGCCTGCCAGACCTCAGCGTGTGGGCTGAGA...TCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGGGCCTGCGTGGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp ACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCTCCTGCCGGCTGCGCTaGGCCGAGTCAAAGACCACT +
Preference number: 4 (lower is better)
Translates to: TCDWCKSGCPTGRAHATSSCRLR*AESKTT
Trigger: AGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGA...GCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp CCCACATTGCCTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTGGAGCCAGGACACCCACAACACTaGCTGCTCCTTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PTLPGRERMLSWPKPVEPGHPQH*LLLPCR
Trigger: TCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGTGTCC...TGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp GGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCCCGTGCCTCCAGCCTTaGGCAGCACAGCTTTCATGG +
Preference number: 4 (lower is better)
Translates to: GLTCDWCKSGCPTGRAHAPCLQP*AAQLSW
Trigger: CCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGG...GGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CCA 90 bp AGGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCTGCACCGTCCGGTATTaGCCGCCGTACTGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RADLRLVQKRMPNRKGSCCTVRY*PPYCVV
Trigger: CACCACGCAGTACGGCGGCCAATACCGGACGGTGCA...GCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
CDS-3UTR CCA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCACCCGGATGCCCCAGTaGATGTCGGGAATGGGCTCG +
Preference number: 4 (lower is better)
Translates to: PCQTVELLKSEVWHRLISTRMPQ*MSGMGS
Trigger: CGAGCCCATTCCCGACATCCACTGGGGCATCCGGGT...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CAGTGGATGTCGGGAATGGGCTCGGCCTCCTCCAGGGACACCCACAACACTGACGTGGCCCACATTGCCTaGGAGGGAGAGGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: QWMSGMGSASSRDTHNTDVAHIA*EGEDAV
Trigger: GACAGCATCCTCTCCCTCCCAGGCAATGTGGGCCAC...GTCAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp CCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTATTGGCCGCCGTACTaGGTGGTGACCTCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PMGAVERQGLTLVLQTYSYWPPY*VVTSGP
Trigger: GGGCCCGGAGGTCACCACGCAGTACGGCGGCCAATA...AGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCTATTGGCCGCCGTACTaGGTGGTGACCTCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VQGFGLKEGLGLGALLLCYWPPY*VVTSGP
Trigger: GGGCCCGGAGGTCACCACGCAGTACGGCGGCCAATA...GCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
CDS-3UTR GCA 90 bp TGCCCACTTGGGTGTCCACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAGTCTGACCTGCGATTGGTaGAAAAGCGGATGCCCAACC +
Preference number: 4 (lower is better)
Translates to: CPLGCPQQTGPAGCAEPSLTCDW*KSGCPT
Trigger: GGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAG...ACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp ACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCACAGGTCCTGCCGGCTaGGCTGAGCCGAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TCDWCKSGCPTGRAHATSTGPAG*AEPSQR
Trigger: TCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGT...GCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp ATGTCAGTGGAGCCCAACATGGAGGCGATGTTGATCACGGGGTTCCGGGCCACGGCTGTAGCACCCGGATaGCCCAGTGGATGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: MSVEPNMEAMLITGFRATAVAPG*PSGCRE
Trigger: TTCCCGACATCCACTGGGGCATCCGGGTGCTACAGC...CGTGGCCCGGAACCCCGTGATCAACATCGCCTCCATGTTGGGCTCCACTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp CCATGTTTCTCCAGCGCTGACAGGTTGAAGCTCTTGAGCTTCCGGTTCTTCTCCGCGCTCAGCGCGGGCTaGCGGCTAAGGCCCCGATAC +
Preference number: 4 (lower is better)
Translates to: PCFSSADRLKLLSFRFFSALSAG*RLRPRY
Trigger: GTATCGGGGCCTTAGCCGCCAGCCCGCGCTGAGCGC...GGAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
CDS-3UTR CCA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCCGTTCCAGGTCCCTCTaGGTCCACTCAGTGTGCACC +
Preference number: 4 (lower is better)
Translates to: PCQTVELLKSEVWHRLISRSRSL*VHSVCT
Trigger: GGTGCACACTGAGTGGACCCAGAGGGACCTGGAACG...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp AGGCCAGCATACTGCACATTCTCTTGCTCTGGGGGTGGCTGTAGCACCCGGATGACCCGGATGCCCCAGTaGATGTCGGGAATGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RPAYCTFSCSGGGCSTRMTRMPQ*MSGMGS
Trigger: CGAGCCCATTCCCGACATCCACTGGGGCATCCGGGT...CATCCGGGTGCTACAGCCACCCCCAGAGCAAGAGAATGTGCAGTATGCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp CCGGGCCACGCAGGCCCTGTAGGTCTCTGGGTACTGACCAATCAAGTGGCAGGACACTTGGGTCTTATCTaGAGGGCTGCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGHAGPVGLWVLTNQVAGHLGLI*RAARLQ
Trigger: CTGCAGCCTGGCAGCCCTCCAGATAAGACCCAAGTG...TCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGGGCCTGCGTGGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp GCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACTCGCTCAGCAGCACCTaGCGTTCCATAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AIGAKADAQPEGLMPPAHSLSST*RSIVSS
Trigger: AGAGGAGACTATGGAACGTCAGGTGCTGCTGAGCGA...GTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
CDS-3UTR TCA 90 bp ACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGCGCCGTACTGCGTGGTaGCCTCCGGGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSTTTEVTLVYQSYRHSWRRTAW*PPGPGR
Trigger: CCTGCCTGGGCCCGGAGGTCACCACGCAGTACGGCG...CCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447436.5
CDS-3UTR TCA 90 bp GCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACAGCTGGCTGCATTGGTaGTGGGGGATCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: ADLRLVQKRMPNRKGSCHSWLHW*WGIRDG
Trigger: CCCATCTCTGATCCCCCATCACCAATGCAGCCAGCT...GTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR TCA 90 bp CCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTACTCCATGCCCTGCTTaGAGGGCACACGCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PMGAVERQGLTLVLQTYSTPCPA*RAHAGP
Trigger: AGGACCGGCGTGTGCCCTTCAAGCAGGGCATGGAGT...AGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CCAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGCACACTGGAGGCAGATaGAGCCCTTGTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGQAEAKPLTVPSLLTLEHTGGR*SPCGCH
Trigger: GTGGCAGCCACAAGGGCTTCATCTGCCTCCAGTGTG...CTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCGGAGGGCTGCCAGGCTaGAGCAGGATTGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PCQTVELLKSEVWHRLISGGLPG*SRIASK
Trigger: CTTTGAAGCAATCCTGCTGCAGCCTGGCAGCCCTCC...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCCTGGGAGGGAGAGGATaGTGTCCTGGCCAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGLGGRG*CPGQSP
Trigger: CGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAG...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACGGGCTGACCTGCGATTaGTGCAAAAGCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: ADLRLVQKRMPNRKGSCHGLTCD*CKSGCP
Trigger: TGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCC...GTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CCA 90 bp GGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCAATGCGACATTGGTCTaGGCTCAGCCGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLTCDWCKSGCPTGRAHANATLV*AQPGRR
Trigger: TCTTCTCCCCGGCTGAGCCCAGACCAATGTCGCATT...GGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CCA 90 bp GGCCCACATTGCCTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTGGAGCGCCACCATGAGGTCCTaGTCAATTGTGAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: GPHCLGGRGCCPGQSPWSATMRS*SIVSNF
Trigger: GAAGTTGCTCACAATTGACCAGGACCTCATGGTGGC...GCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp GTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGCGCCGTACTGCGTGGTaGCCTCCGGGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLIYYDYIAHIPLPTHPWRRTAW*PPGPGR
Trigger: CCTGCCTGGGCCCGGAGGTCACCACGCAGTACGGCG...CCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp AGTGCCCACTTGGGTGTCCACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SAHLGVHSKQVLPAALSRMFLQR*QVEALE
Trigger: CTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACAT...TCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp GGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCTCCAAGGCTTTGGTCTaGAAGAAGGACTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GLTCDWCKSGCPTGRAHASKALV*KKDSAL
Trigger: CAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGA...GGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp CACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAGTCAAAGACCACTCTCTGCATCATCGCTGGCACTaGCGTCCAAGGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HSKQVLPAALSRVKDHSLHHRWH*RPRLWS
Trigger: AGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATG...CAGAGAGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp GAATGGGCTCGGCCTCCTCCAGGGACACCCACAACACTGACTGCTCCTTCCCTGTCAAGTGGCAGGAAATaGAGCCACCATGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: EWARPPPGTPTTLTAPSLSSGRK*SHHGNH
Trigger: GTGGTTCCCATGGTGGCTTCATTTCCTGCCACTTGA...CAGGGAAGGAGCAGTCAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp CCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGACATGGAGGCGATGTTaGTCACGGGGTTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PNQGNVPGTTFAHGCRGKTWRRC*SRGSGP
Trigger: TGGCCCGGAACCCCGTGATCAACATCGCCTCCATGT...CTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGACACCCTGGGCTAGGTaGTCTGTCCAGCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: VERQGLTLVLQTYSWEGWTPWAR*SVQPRG
Trigger: GCCCCTAGGCTGGACAGATCACCTAGCCCAGGGTGT...CCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CCCCTCAAGCACAGAGATGTTGCCACTCTCGACATCCAGCACGCAGAGCACAGGAACCGGAAGGGCTCATaGCACCAGCCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: PLKHRDVATLDIQHAEHRNRKGS*HQPTNT
Trigger: GGTGTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTT...CCTGTGCTCTGCGTGCTGGATGTCGAGAGTGGCAACATCTCTGTGCTTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR GCA 90 bp CAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAGTCAAAGACCACTCTCTGGCAAGTTCTCTCCCAGCTaGCGAGGCACAACATCTACC +
Preference number: 4 (lower is better)
Translates to: QQTGPAGCAEPSQRPLSGKFSPS*RGTTST
Trigger: GGTAGATGTTGTGCCTCGGCAGCTGGGAGAGAACTT...GCCAGAGAGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp GTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCACAGGTCCTGCCGGCTaGGCTGAGCCGAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VQGFGLKEGLGLGALLLCTGPAG*AEPSQR
Trigger: TCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGT...GCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp CTGCTGAAAGGAAAGCCAGCCTCCACCACGCACCAGTCAGGGATGTCAGTGGAGGGAGGGCTGCCAGGCTaGAGCAGGATTGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LLKGKPASTTHQSGMSVEGGLPG*SRIASK
Trigger: CTTTGAAGCAATCCTGCTGCAGCCTGGCAGCCCTCC...CTCCACTGACATCCCTGACTGGTGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp CTTCTCTGCCACATACAACAAGTGTGTCTCCGAGTGCGACCAGGACAGGCAGCCGCTCAGCAGTCAGTGTaGACCGTCCGGTATTGGCCG +
Preference number: 4 (lower is better)
Translates to: LLCHIQQVCLRVRPGQAAAQQSV*TVRYWP
Trigger: CGGCCAATACCGGACGGTGCACACTGACTGCTGAGC...GGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447436.5
CDS-3UTR CCA 90 bp GTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTGCACCGTCCGGTATTaGCCGCCGTACTGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: VERQGLTLVLQTYSWEGWCTVRY*PPYCVV
Trigger: CACCACGCAGTACGGCGGCCAATACCGGACGGTGCA...CCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp AGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCCACTTGGGTCTTATCTaGAGGGCTGCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RQCPWDYFCPWVPWKDRAHLGLI*RAARLQ
Trigger: CTGCAGCCTGGCAGCCCTCCAGATAAGACCCAAGTG...GGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCGAGAGGATGCTGTCCTaGCCAAAGCCCGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGERMLS*PKPVEP
Trigger: TGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTC...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GCCACCAGCCCACAAACACCACACCAGCATCTCCAGGGGCCCAAAATGCCTGTCAGCTTTCATGGTGCCTaGAGGAGACTCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ATSPQTPHQHLQGPKMPVSFHGA*RRLSAQ
Trigger: CTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCT...GACAGGCATTTTGGGCCCCTGGAGATGCTGGTGTGGTGTTTGTGGGCTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR TCA 90 bp CCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGAGCTGGCTGCATTGGTaGTGGGGGATCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: PNQGNVPGTTFAHGCRGKSWLHW*WGIRDG
Trigger: CCCATCTCTGATCCCCCATCACCAATGCAGCCAGCT...CTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTGCAGGCAGTCACTGCTaGAAGGAAAGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VGGGVGDGLVQSTSRNQAAGSHC*KESQPP
Trigger: TGGAGGCTGGCTTTCCTTTCAGCAGTGACTGCCTGC...AGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGCCGGGGGGGCCCAAAATGCCTTaGTGGCTTGGTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QRWVLQVDNATLVWAQPGGPKMP*WLGLAS
Trigger: AGAAGCCAGACCAAGCCATCAAGGCATTTTGGGCCC...CCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCGCACAGCTTTCATGGTaGCTGAAGGAGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PCQTVELLKSEVWHRLISAQLSW*LKETLC
Trigger: GCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGC...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp ACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCGCACAGCTTTCATGGTaGCTGAAGGAGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TCDWCKSGCPTGRAHATSAQLSW*LKETLC
Trigger: GCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGC...GCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp GGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGCCCCGTGCCTCCAGCCTTaGGCAGCACAGCTTTCATGG +
Preference number: 4 (lower is better)
Translates to: GSEMGTAGRQCDIGLGSAPCLQP*AAQLSW
Trigger: CCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGG...GGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp ATGCCACCAGCCCACAAACACCACACCAGCATCTCCAGGGGCCCAAAATGCCTTAAGTGTGTCTCCGAGTaGGACCAGGACAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MPPAHKHHTSISRGPKCLKCVSE*DQDRQP
Trigger: TGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTT...AAGGCATTTTGGGCCCCTGGAGATGCTGGTGTGGTGTTTGTGGGCTGGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp CGTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGAACCGGAAGGGCTCATaGCACCAGCCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: RPRLWSERRTRPWGASSLNRKGS*HQPTNT
Trigger: GGTGTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTT...CAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp CTTCTCTGCCACATACAACAAGTGTGTCTCCGAGTGCGACCAGGACAGGCAGCCAACCGGAAGGGCTCATaGCACCAGCCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: LLCHIQQVCLRVRPGQAANRKGS*HQPTNT
Trigger: GGTGTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTT...GGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp TTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACAAACTGGTGCAAAAGCGGATaGCCAACCGGAAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LVQKRMPNRKGSCHQPTNWCKSG*PTGRAH
Trigger: ATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCA...GTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp TTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACAAACCTGACCTGCGATTGGTaGAAAAGCGGATGCCCAACC +
Preference number: 4 (lower is better)
Translates to: LVQKRMPNRKGSCHQPTNLTCDW*KSGCPT
Trigger: GGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAG...GTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp ATGTCAGTGGAGCCCAACATGGAGGCGATGTTGATCACGGGGTTCCGGGCCACGCCGCAAAGCCCATCTTaGAAAGCATGGCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: MSVEPNMEAMLITGFRATPQSPS*KAWLGT
Trigger: TGTTCCCAGCCATGCTTTGCAAGATGGGCTTTGCGG...CGTGGCCCGGAACCCCGTGATCAACATCGCCTCCATGTTGGGCTCCACTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp ACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCTGAAGGAGACTCTCTaGTCAGCAGTCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TCDWCKSGCPTGRAHATSLKETL*SAVSVH
Trigger: GTGCACACTGACTGCTGAGCAGAGAGTCTCCTTCAG...GCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447436.5
CDS-3UTR CCA 90 bp GGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCGGGCTGACCTGCGATTaGTGCAAAAGCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GLLLPMGAVERQGLTLVLGLTCD*CKSGCP
Trigger: TGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCC...GAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGCTGTCAGCTGACCAGCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGAGGGCTGACCTGCGATTaGTGCAAAAGCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GCQLTSIPKAEGCSRSQRGLTCD*CKSGCP
Trigger: TGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCC...TCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGCTGGTCAGCTGACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CCA 90 bp AGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCAATGCGACATTGGTCTaGGCTCAGCCGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RQCPWDYFCPWVPWKDRANATLV*AQPGRR
Trigger: TCTTCTCCCCGGCTGAGCCCAGACCAATGTCGCATT...GGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTAAGTGGATGTCGGGAATaGGCTCGGCCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVSGCRE*ARPPPG
Trigger: CCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACT...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GCCACATGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACAGTGGATGTCGGGAATaGGCTCGGCCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ATWLASKCSSWSTCSTANSGCRE*ARPPPG
Trigger: CCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACT...GTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp GCAAACTGGACATCCTTCACATCCTGGTGGCCCACATTGCCTGGGAGGGAGAGGCCTGGCCAAAGCCCGTaGAGCCACGATAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: ANWTSFTSWWPTLPGRERPGQSP*SHDSSL
Trigger: TAGTGAACTATCGTGGCTCCACGGGCTTTGGCCAGG...CCTCTCCCTCCCAGGCAATGTGGGCCACCAGGATGTGAAGGATGTCCAGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp CCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGTCCTTCACATCCTGGTaGCCCACATTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PNQGNVPGTTFAHGCRGKSFTSW*PTLPGR
Trigger: CCTCCCAGGCAATGTGGGCCACCAGGATGTGAAGGA...CTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CTGCTGAAAGGAAAGCCAGCCTCCACCACGCACCAGTCAGGGATGTCAGTGGAGACATCCTTCACATCCTaGTGGCCCACATTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLKGKPASTTHQSGMSVETSFTS*WPTLPG
Trigger: CCCAGGCAATGTGGGCCACCAGGATGTGAAGGATGT...CTCCACTGACATCCCTGACTGGTGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp GAATGGGCTCGGCCTCCTCCAGGGACACCCACAACACTGACTGCTCCTTCCCTGTCAAAGTGTTCCTCCTaGAGCACCTGTTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: EWARPPPGTPTTLTAPSLSKCSS*STCSTA
Trigger: TGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGA...CAGGGAAGGAGCAGTCAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp CTGCTGAAAGGAAAGCCAGCCTCCACCACGCACCAGTCAGGGATGTCAGTGGAGAGTCAGGGATGTCAGTaGAGCCCAACATGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: LLKGKPASTTHQSGMSVESQGCQ*SPTWRR
Trigger: TCGCCTCCATGTTGGGCTCCACTGACATCCCTGACT...CTCCACTGACATCCCTGACTGGTGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCATGCGTGGGTGCTTTTaGGATAGAGCAGGAGCCGAA +
Preference number: 4 (lower is better)
Translates to: PCQTVELLKSEVWHRLISMRGCF*DRAGAE
Trigger: TTCGGCTCCTGCTCTATCCCAAAAGCACCCACGCAT...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGCTGCCCACGCATCCGTaGAGTCCAGAGCCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VERQGLTLVLQTYSWEGWLPTHP*SPEPRK
Trigger: CTTTCTGGGCTCTGGACTCCACGGATGCGTGGGCAG...CCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGGCCTCCCTTCTCACACTaGAGGCAGATGAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QDRQRLSLSLFPPFSHWRPPFSH*RQMKPL
Trigger: CAAGGGCTTCATCTGCCTCCAGTGTGAGAAGGGAGG...CCTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCGCTGGTACAGAGTCCTaGTTGCCAGGACAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGAGTES*LPGQAE
Trigger: CTCTGCCTGTCCTGGCAACCAGGACTCTGTACCAGC...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CAA 72 bp GCTTCCCCAACCAAGGCAATGTCCCTGGGACTACTTTaGCCCATGGGTGCCGTGGAAAGACAGGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: ASPTKAMSLGLL*PMGAVERQGLT
Trigger: TGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CAA 72 bp GACACATTCTCAGGGACCCCCTCAAGCACAGAGATGTaGCCACTCTCGACATCCAGCACGCAGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: DTFSGTPSSTEM*PLSTSSTQSTG
Trigger: CCCTGTGCTCTGCGTGCTGGATGTCGAGAGTGGCAACATCTCTGTGCTTGAGGGGGTCCCTGAGAATGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR TCA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTCGCTCAGCAGCACCTaGCGTTCCATAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGSLSST*RSIVSS
Trigger: AGAGGAGACTATGGAACGTCAGGTGCTGCTGAGCGA...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTTCCTGCAAACACCACTaGGTCCCCGTCATGGAACAC +
Preference number: 4 (lower is better)
Translates to: VGGGVGDGLVQSTSRNQASCKHH*VPVMEH
Trigger: GTGTTCCATGACGGGGACTCAGTGGTGTTTGCAGGA...AGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp TTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACAAACAGCTTTCATGGTGCCTaGAGGAGACTCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LVQKRMPNRKGSCHQPTNSFHGA*RRLSAQ
Trigger: CTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCT...GTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR TCA 90 bp CTTCTCTGCCACATACAACAAGTGTGTCTCCGAGTGCGACCAGGACAGGCAGCCCATCATCGCTGGCACTaGCGTCCAAGGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLCHIQQVCLRVRPGQAAHHRWH*RPRLWS
Trigger: AGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATG...GGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp AGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCCAAACTGATCCCCCTTaGTGGCTTGGTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQCPWDYFCPWVPWKDRAQTDPP*WLGLAS
Trigger: AGAAGCCAGACCAAGCCATCAAGGGGGATCAGTTTG...GGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CATGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTGGATCCTGCCGGCTGCGCTaGGCCGAGTCAAAGACCACT +
Preference number: 4 (lower is better)
Translates to: HGLHQSVPPGAPVPLQTGSCRLR*AESKTT
Trigger: AGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGA...TCCAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCGGTCCTGGTCAATTGTaGGCAACTTCCAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGGPGQL*ATSSSH
Trigger: GTGGGAGCTGGAAGTTGCTCACAATTGACCAGGACC...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCAGAGCACAGCATTCATaGAGCTGTCTGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: PCQTVELLKSEVWHRLISRAQHS*SCLTPP
Trigger: AGGTGGAGTCAGACAGCTTCATGAATGCTGTGCTCT...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTGCCCTGCCAGACCGTTaGGCTCCTCAAGAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSALPDR*APQERS
Trigger: ACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGGC...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTAGGGCTCGGGTGGCTTaGGCCCAGCACACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSRARVA*AQHTLG
Trigger: GCCCAGGGTGTGCTGGGCTCAAGCCACCCGAGCCCT...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTTGGGTCCACTCAGTGTaGACCGTCCGGTATTGGCCG +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSWVHSV*TVRYWP
Trigger: CGGCCAATACCGGACGGTGCACACTGAGTGGACCCA...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp TCTCCCAGCTGCCGAGGCACAACATCTACCACCACTGAGGTAACCTTGGTATACCCGTGCCTCCAGCCTTaGGCAGCACAGCTTTCATGG +
Preference number: 4 (lower is better)
Translates to: SPSCRGTTSTTTEVTLVYPCLQP*AAQLSW
Trigger: CCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGG...GTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCCTCGGCAGCTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp GCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGAAGTTCTCTCCCAGCTGAAGTGTGTCTCCGAGTaGGACCAGGACAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ASQRQKAAVDPREVLSQLKCVSE*DQDRQP
Trigger: TGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTT...CAGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTGGTGCAAAAGCGGATaGCCAACCGGAAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGWCKSG*PTGRAH
Trigger: ATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCA...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCTGGTGCAAAAGCGGATaGCCAACCGGAAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: VQGFGLKEGLGLGALLLCWCKSG*PTGRAH
Trigger: ATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCA...GCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp CCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTCTGACCTGCGATTGGTaGAAAAGCGGATGCCCAACC +
Preference number: 4 (lower is better)
Translates to: PMGAVERQGLTLVLQTYSLTCDW*KSGCPT
Trigger: GGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAG...AGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GTCCAGGGGACACATTCTCAGGGACCCCCTCAAGCACAGAGATGTTGCCACTCTCTGACCTGCGATTGGTaGAAAAGCGGATGCCCAACC +
Preference number: 4 (lower is better)
Translates to: VQGTHSQGPPQAQRCCHSLTCDW*KSGCPT
Trigger: GGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAG...AGAGTGGCAACATCTCTGTGCTTGAGGGGGTCCCTGAGAATGTGTCCCCTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR GCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTACAGGTCCTGCCGGCTaGGCTGAGCCGAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSTGPAG*AEPSQR
Trigger: TCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGT...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTAGCTGTAGCACCCGGATaGCCCAGTGGATGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVAVAPG*PSGCRE
Trigger: TTCCCGACATCCACTGGGGCATCCGGGTGCTACAGC...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp AGGGCTGCCAGGCTGCAGCAGGATTGCTTCAAAGTCAAGGCCAGCATACTGCACTCTTATCTGGAGGGCTaGCAGGCTGCAGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: RAARLQQDCFKVKASILHSYLEG*QAAAGL
Trigger: CAATCCTGCTGCAGCCTGGCAGCCCTCCAGATAAGA...GTGCAGTATGCTGGCCTTGACTTTGAAGCAATCCTGCTGCAGCCTGGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp CACATGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTGCCTGGTGGCCCACATTaGCTGGGAGGGAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: HMACIKVFLLEHLFHCKLPGGPH*LGGRGC
Trigger: GCATCCTCTCCCTCCCAGGCAATGTGGGCCACCAGG...CAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTATGGCAGGGCTTCAGCTaGCCAAGTGTGTGCGTAGCC +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVWQGFS*PSVCVA
Trigger: GGCTACGCACACACTTGGGCAGCTGAAGCCCTGCCA...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CCAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGAGGCTGATCAGCTCATaGAGAATGGCAGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PGQAEAKPLTVPSLLTLERLISS*RMAGLQ
Trigger: CTGAAGCCCTGCCATTCTGCATGAGCTGATCAGCCT...CTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCACTTTTGCCCATGGGTaGCGTGGAAAGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLLLPMGAVERQGLTLVLTFAHG*RGKTGP
Trigger: AGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGT...GAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCTTGATGGCTTGGTCTaGCTTCTTCAGCCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: ADLRLVQKRMPNRKGSCHLDGLV*LLQPGY
Trigger: ATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAG...GTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp CCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTACCACCATGGGCACTTaGGTCTTATCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PMGAVERQGLTLVLQTYSTTMGT*VLSGGL
Trigger: CAGCCCTCCAGATAAGACCCAAGTGCCCATGGTGGT...AGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CAGGAAATGAAGCCACCATGGGAACCACCCATAAGGGCCACATGGCTTGCATCAGAGAGGATGCTGTCCTaGCCAAAGCCCGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QEMKPPWEPPIRATWLASERMLS*PKPVEP
Trigger: TGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTC...TGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp GGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCTCAGCTCATGCAGAATaGCAGGGCTTCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GLLLPMGAVERQGLTLVLSAHAE*QGFSCP
Trigger: TGGGCAGCTGAAGCCCTGCCATTCTGCATGAGCTGA...GAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCGGGTTGGGGATGGTTTaGTACAAAGTACCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PCQTVELLKSEVWHRLISGLGMV*YKVPAG
Trigger: TCCTGCTGGTACTTTGTACCAAACCATCCCCAACCC...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCTCATGCCAGATGAAGCCCTTGTaGCTGCCACACCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: QTVELLKSEVWHRLISSCQMKPL*LPHPEP
Trigger: AGGTTCTGGGTGTGGCAGCCACAAGGGCTTCATCTG...GCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTTGCCCATGGGTGCCGTaGAAAGACAGGGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSCPWVP*KDRASH
Trigger: GTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCA...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
3UTR CAA 72 bp TTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACTCCTaGCTAGGGCTCGGGTGGCTTGAGCCCAGCACACCC +
Preference number: 4 (lower is better)
Translates to: LAFASRKCVSDS*LGLGWLEPSTP
Trigger: GGGTGTGCTGGGCTCAAGCCACCCGAGCCCTAGCAAGGAGTCACTGACACATTTCCTGGAAGCAAAGGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGGATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QDRQRLSLSLFPPFSHWRMFLQR*QVEALE
Trigger: CTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACAT...CCTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp ATACAACAAGTGTGTCTCCGAGTGCGACCAGGACAGGCAGCCAAAGCAGTCATCAGCTGGCTGCATTGGTaGTGGGGGATCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: IQQVCLRVRPGQAAKAVISWLHW*WGIRDG
Trigger: CCCATCTCTGATCCCCCATCACCAATGCAGCCAGCT...GATGACTGCTTTGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp GGCACAACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACTCCTGCCGGCTGCGCTaGGCCGAGTCAAAGACCACT +
Preference number: 4 (lower is better)
Translates to: GTTSTTTEVTLVYQSYRHSCRLR*AESKTT
Trigger: AGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGA...GTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTGGACACCCACAACACTaGCTGCTCCTTCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSGHPQH*LLLPCR
Trigger: TCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGTGTCC...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CATGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTGGAACATGGAGGCGATGTTaGTCACGGGGTTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: HGLHQSVPPGAPVPLQTGTWRRC*SRGSGP
Trigger: TGGCCCGGAACCCCGTGATCAACATCGCCTCCATGT...TCCAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp CAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCTCATGCAAGTGTGGCACAGGCTaGTCAGCTCATGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: QTVELLKSEVWHRLISSCKCGTG*SAHAEW
Trigger: CCATTCTGCATGAGCTGATCAGCCTGTGCCACACTT...GCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CGTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCTCTGCTCAGCAGTCTaGCGTTCCATAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RPRLWSERRTRPWGASSLLCSAV*RSIVSS
Trigger: AGAGGAGACTATGGAACGTCAGACTGCTGAGCAGAG...CAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446089.5
CDS-3UTR GCA 90 bp CGTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGGCACAGCTTTCATGGTaGCTGAAGGAGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RPRLWSERRTRPWGASSLAQLSW*LKETLC
Trigger: GCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGC...CAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTAAAGTGTGTCTCCGAGTaGGACCAGGACAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVKCVSE*DQDRQP
Trigger: TGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTT...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGGAATACAGGGCTGACCTaGGATTGGTGCAAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: QDRQRLSLSLFPPFSHWRNTGLT*DWCKSG
Trigger: TCCGCTTTTGCACCAATCGCAGGTCAGCCCTGTATT...CCTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp TTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACAAACAATACAGGGCTGACCTaGGATTGGTGCAAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: LVQKRMPNRKGSCHQPTNNTGLT*DWCKSG
Trigger: TCCGCTTTTGCACCAATCGCAGGTCAGCCCTGTATT...GTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp GCCTGTCCAGGGGACACATTCTCAGGGACCCCCTCAAGCACAGAGATGTTGCCAAATACAGGGCTGACCTaGGATTGGTGCAAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: ACPGDTFSGTPSSTEMLPNTGLT*DWCKSG
Trigger: TCCGCTTTTGCACCAATCGCAGGTCAGCCCTGTATT...TGGCAACATCTCTGTGCTTGAGGGGGTCCCTGAGAATGTGTCCCCTGGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR GCA 90 bp CCAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGACTGCAGGTAGACAATaGGACATTGGTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGQAEAKPLTVPSLLTLETAGRQ*DIGLGS
Trigger: TGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGT...CTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GAGCCGAGTCAAAGACCACTCTCTGGCTGTCAGCTGACCAGCATCCCAAAGGCAAAGTTCTCTCCCAGCTaGCGAGGCACAACATCTACC +
Preference number: 4 (lower is better)
Translates to: EPSQRPLSGCQLTSIPKAKFSPS*RGTTST
Trigger: GGTAGATGTTGTGCCTCGGCAGCTGGGAGAGAACTT...TGCCTTTGGGATGCTGGTCAGCTGACAGCCAGAGAGTGGTCTTTGACTCGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp GATGGGGGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCCAGGGGCCCAAAATaGCTTGATGGCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DGGSEMGTAGRQCDIGLGSRGPK*LDGLVW
Trigger: CCAGACCAAGCCATCAAGGCATTTTGGGCCCCTGGA...GCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp GAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTACTGAGTCCCCGTCATaGAACACCAGGTATTGGCGG +
Preference number: 4 (lower is better)
Translates to: EVGLGMVWYKVPAGTRLCTESPS*NTRYWR
Trigger: CCGCCAATACCTGGTGTTCCATGACGGGGACTCAGT...ACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACAAACCTTGATGGCTTGGTCTaGCTTCTTCAGCCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LVQKRMPNRKGSCHQPTNLDGLV*LLQPGY
Trigger: ATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAG...GTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp GTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTCCCCCTTGATGGCTTaGTCTGGCTTCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VERQGLTLVLQTYSWEGWSPLMA*SGFFSL
Trigger: CAGGCTGAAGAAGCCAGACCAAGCCATCAAGGGGGA...CCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TTGGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGGCTGACCTGCGATTaGTGCAAAAGCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: LVWLLQPGYLIIAGTDVQGLTCD*CKSGCP
Trigger: TGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCC...TTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp GATGGGGGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCAATGCGACATTGGTCTaGGCTCAGCCGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: DGGSEMGTAGRQCDIGLGNATLV*AQPGRR
Trigger: TCTTCTCCCCGGCTGAGCCCAGACCAATGTCGCATT...GCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CCA 90 bp AGGGCTCATGCCACCAGCCCACAAACACCACACCAGCATCTCCAGGGGCCCAAAATGGGGGATCAGAGATaGGTACTGCAGGTAGACAAT +
Preference number: 4 (lower is better)
Translates to: RAHATSPQTPHQHLQGPKMGDQR*VLQVDN
Trigger: ATTGTCTACCTGCAGTACCCATCTCTGATCCCCCAT...TTTGGGCCCCTGGAGATGCTGGTGTGGTGTTTGTGGGCTGGTGGCATGAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CCA 90 bp TGGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGTCACAGTGCCCACTTaGGTGTCCACAGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: WSGFFSLAISSSLALTSKVTVPT*VSTANR
Trigger: CCTGTTTGCTGTGGACACCCAAGTGGGCACTGTGAC...CTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp GCATCCCAAAGGCAGAAGGCTGCAGTAGATCCCAGAGAAGTTCTCTCCCAGCTGGTCACAGTGCCCACTTaGGTGTCCACAGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: ASQRQKAAVDPREVLSQLVTVPT*VSTANR
Trigger: CCTGTTTGCTGTGGACACCCAAGTGGGCACTGTGAC...CAGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp CCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTCCATCTTGCAAAGCATaGCTGGGAACAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PMGAVERQGLTLVLQTYSPSCKA*LGTASR
Trigger: CCTGGATGCTGTTCCCAGCCATGCTTTGCAAGATGG...AGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCGGCCCTGTAGGTCTCTaGGTACTGACCAATCAAGTG +
Preference number: 4 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGGPVGL*VLTNQV
Trigger: CACTTGATTGGTCAGTACCCAGAGACCTACAGGGCC...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTAGCTTTCATGGTGCCTaGAGGAGACTCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: EVGLGMVWYKVPAGTRLCSFHGA*RRLSAQ
Trigger: CTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCT...ACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGCTTTGAGCTTTCATGGTGCCTaGAGGAGACTCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GFFSLAISSSLALTSKALSFHGA*RRLSAQ
Trigger: CTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCT...CAAAGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp CCACATAATACAGGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGATCCAAGGCTTTGGTCTaGAAGAAGGACTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PHNTGLTCDWCKSGCPTGSKALV*KKDSAL
Trigger: CAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGA...TCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCTGTATTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp GTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGTCCTGCCGGCTGCGCTaGGCCGAGTCAAAGACCACT +
Preference number: 4 (lower is better)
Translates to: VLIYYDYIAHIPLPTHPWSCRLR*AESKTT
Trigger: AGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGA...CCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CAGGAAATGAAGCCACCATGGGAACCACCCATAAGGGCCACATGGCTTGCATCAGGTCCTGGTCAATTGTaGGCAACTTCCAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QEMKPPWEPPIRATWLASGPGQL*ATSSSH
Trigger: GTGGGAGCTGGAAGTTGCTCACAATTGACCAGGACC...TGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp CCGTGGAGCCACGATAGTTCACTAGTAGTACCGCAAAGCCCATCTTGCAAAGCAGCAGGCAGTCACTGCTaGAAGGAAAGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PWSHDSSLVVPQSPSCKAAGSHC*KESQPP
Trigger: TGGAGGCTGGCTTTCCTTTCAGCAGTGACTGCCTGC...TGCTTTGCAAGATGGGCTTTGCGGTACTACTAGTGAACTATCGTGGCTCCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp GTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGATCGAATGTTCTCCATaGGTTCCAGGTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VERQGLTLVLQTYSWEGWIECSP*VPGPSG
Trigger: CCCAGAGGGACCTGGAACGCATGGAGAACATTCGAT...CCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACTCCACACTGTTGCCTaGAGGTCCTGCAAACACCAC +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVLHTVA*RSCKHH
Trigger: GTGGTGTTTGCAGGACCTGCAGGCAACAGTGTGGAG...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGGCGCTTCTTCTCTGCCACATACAACAAGTGTGTCTCCGAGTGCGACCAGGACGGGGCGCTTCTTCTCTaGCACATACAACAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GRFFSATYNKCVSECDQDGALLL*HIQQVC
Trigger: ACACACTTGTTGTATGTGGCAGAGAAGAAGCGCCCC...GTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAGAAGCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp AAAGCCTCCTGCTGCCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCCGCAGAGCACAGGGATaGTTTTGGAAACCATGTTTT +
Preference number: 4 (lower is better)
Translates to: KASCCPARPLSSSRAKCGRRAQG*FWKPCF
Trigger: AAAACATGGTTTCCAAAAGCATCCCTGTGCTCTGCG...GCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGGCAGCAGGAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GATGTTGCCACTCTCGACATCCAGCACGCAGAGCACAGGGATGCTTTTGGAAACTGGTGCAAAAGCGGATaGCCAACCGGAAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: DVATLDIQHAEHRDAFGNWCKSG*PTGRAH
Trigger: ATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCA...GTTTCCAAAAGCATCCCTGTGCTCTGCGTGCTGGATGTCGAGAGTGGCAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR GCA 90 bp GGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCCACATAAAGTTCTCTCCCAGCTaGCGAGGCACAACATCTACC +
Preference number: 4 (lower is better)
Translates to: GFGLKEGLGLGALLLCHIKFSPS*RGTTST
Trigger: GGTAGATGTTGTGCCTCGGCAGCTGGGAGAGAACTT...TATGTGGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp CCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGCCAAAGGCAGAAGGCTaGAGTAGATCCCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PNQGNVPGTTFAHGCRGKPKAEG*SRSQRS
Trigger: ACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGG...CTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GAGCCGAGTCAAAGACCACTCTCTGGCTGTCAGCTGACCAGCATCCCAAAGGCACCAAAGGCAGAAGGCTaGAGTAGATCCCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: EPSQRPLSGCQLTSIPKAPKAEG*SRSQRS
Trigger: ACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGG...TGCCTTTGGGATGCTGGTCAGCTGACAGCCAGAGAGTGGTCTTTGACTCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp CAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCTCATGCTCAAGGCCAGCATACTaGACATTCTCTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QTVELLKSEVWHRLISSCSRPAY*TFSCSG
Trigger: CCCAGAGCAAGAGAATGTGCAGTATGCTGGCCTTGA...GCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTATCTTATCTGGAGGGCTaGCAGGCTGCAGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVSYLEG*QAAAGL
Trigger: CAATCCTGCTGCAGCCTGGCAGCCCTCCAGATAAGA...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTAGCTGCCCAAGTGTGTaGGTAGCCAGAGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSSCPSV*VARAQH
Trigger: ATGCTGTGCTCTGGCTACGCACACACTTGGGCAGCT...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGCGCTTCTTCTCTGCCACATACAACAAGTGTGTCTCCGAGTGCGACCAGGACACTGGCTTCTTCAGCCTaGCTATCTCATCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: GASSLPHTTSVSPSATRTLASSA*LSHHRW
Trigger: CCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAG...TGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAGAAGCGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp GCCTGTCCAGGGGACACATTCTCAGGGACCCCCTCAAGCACAGAGATGTTGCCAGCACAGGGATGCTTTTaGAAACCATGTTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ACPGDTFSGTPSSTEMLPAQGCF*KPCFLP
Trigger: GGGGAGAAAACATGGTTTCCAAAAGCATCCCTGTGC...TGGCAACATCTCTGTGCTTGAGGGGGTCCCTGAGAATGTGTCCCCTGGACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR CCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTAGTCACAGTGCCCACTTaGGTGTCCACAGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVVTVPT*VSTANR
Trigger: CCTGTTTGCTGTGGACACCCAAGTGGGCACTGTGAC...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCGCCACCATGAGGTCCTaGTCAATTGTGAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGATMRS*SIVSNF
Trigger: GAAGTTGCTCACAATTGACCAGGACCTCATGGTGGC...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CAGGAAATGAAGCCACCATGGGAACCACCCATAAGGGCCACATGGCTTGCATCAGGGTTGGAGGTAGGCTaGGTGTGGAAAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: QEMKPPWEPPIRATWLASGLEVG*VWKTVP
Trigger: TGGCACAGTTTTCCACACCCAGCCTACCTCCAACCC...TGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp CAGGAAATGAAGCCACCATGGGAACCACCCATAAGGGCCACATGGCTTGCATCAACCACCATGGGCACTTaGGTCTTATCTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QEMKPPWEPPIRATWLASTTMGT*VLSGGL
Trigger: CAGCCCTCCAGATAAGACCCAAGTGCCCATGGTGGT...TGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp GTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGCTTGCAAAGCATGGCTaGGAACAGCATCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VERQGLTLVLQTYSWEGWLAKHG*EQHPGS
Trigger: ACTGCCTGGATGCTGTTCCCAGCCATGCTTTGCAAG...CCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTCCTGGCCAAAGCCCGTaGAGCCACGATAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSPGQSP*SHDSSL
Trigger: TAGTGAACTATCGTGGCTCCACGGGCTTTGGCCAGG...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCTCAAAGTGTTCCTCCTaGAGCACCTGTTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GLLLPMGAVERQGLTLVLSKCSS*STCSTA
Trigger: TGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGA...GAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCAATGCCTTGATGGCTTaGTCTGGCTTCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VQGFGLKEGLGLGALLLCNALMA*SGFFSL
Trigger: CAGGCTGAAGAAGCCAGACCAAGCCATCAAGGCATT...GCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp CTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGCTTTGGTCTGATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LQPGYLIIAGTDVQGFGLMFLQR*QVEALE
Trigger: CTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACAT...CAGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp ACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGAGCTGGCTGCATTGGTaGTGGGGGATCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: TSTTTEVTLVYQSYRHSWSWLHW*WGIRDG
Trigger: CCCATCTCTGATCCCCCATCACCAATGCAGCCAGCT...CCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR TCA 90 bp GCCTGTCCAGGGGACACATTCTCAGGGACCCCCTCAAGCACAGAGATGTTGCCAAACATCTACCACCACTaGGGTAACCTTGGTATACCA +
Preference number: 4 (lower is better)
Translates to: ACPGDTFSGTPSSTEMLPNIYHH*GNLGIP
Trigger: TGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTT...TGGCAACATCTCTGTGCTTGAGGGGGTCCCTGAGAATGTGTCCCCTGGACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR TCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTTCAAGTGGCAGGAAATaGAGCCACCATGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSSSGRK*SHHGNH
Trigger: GTGGTTCCCATGGTGGCTTCATTTCCTGCCACTTGA...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTTCTCAGCCCACACGCTaGGGTCTGGCAGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSSQPTR*GLAGSH
Trigger: GTGACTGCCTGCCAGACCTCAGCGTGTGGGCTGAGA...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTAGTGGTGTCTTCACCTaGGGGATGTATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSSGVFT*GMYLMG
Trigger: GCCCATCAGATACATCCCTCAGGTGAAGACACCACT...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp ACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGCTGCATGGGCCCAAAATGCCTTaGTGGCTTGGTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TTTEVTLVYQSYRHSWLHGPKMP*WLGLAS
Trigger: AGAAGCCAGACCAAGCCATCAAGGCATTTTGGGCCC...ATGCAGCCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp ACTGACGTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTGGGGCGCTTCTTCTCTaGCACATACAACAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: TDVQGFGLKEGLGLGALLGALLL*HIQQVC
Trigger: ACACACTTGTTGTATGTGGCAGAGAAGAAGCGCCCC...AAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGACGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp TCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGCTACTGCAGGTAGACAATaGGACATTGGTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SGFFSLAISSSLALTSKATAGRQ*DIGLGS
Trigger: TGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGT...AGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp CCACATAATACAGGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAACTGCAGGTAGACAATaGGACATTGGTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PHNTGLTCDWCKSGCPTGTAGRQ*DIGLGS
Trigger: TGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGT...TCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCTGTATTATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp GGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGCCCCAAAGGCAGAAGGCTaGAGTAGATCCCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GSEMGTAGRQCDIGLGSAPKAEG*SRSQRS
Trigger: ACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGG...GGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp CATGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTGGAGGGTGTGGAAAACTGTaGCACCATGAGGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: HGLHQSVPPGAPVPLQTGGCGKL*HHEVLV
Trigger: GACCAGGACCTCATGGTGGCACAGTTTTCCACACCC...TCCAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp CCTGTAGGTCTCTGGGTACTGACCAATCAAGTGGCAGGAAATGAAGCCACCATGACCCACAACACTGACTaGTCCTTCCCTGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PVGLWVLTNQVAGNEATMTHNTD*SFPAEG
Trigger: GCCTTCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGT...CATGGTGGCTTCATTTCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTAAGGCTGCAGCAGGATTaGTTCAAAGTCAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVRLQQD*FKVKAS
Trigger: GCTGGCCTTGACTTTGAAGCAATCCTGCTGCAGCCT...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCTGGAACACCAGGTATTaGCGGCAGAATCGAATGTTC +
Preference number: 4 (lower is better)
Translates to: GLLLPMGAVERQGLTLVLWNTRY*RQNRMF
Trigger: GAACATTCGATTCTGCCGCCAATACCTGGTGTTCCA...GAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCTCATGCGCACAGGGATGCTTTTaGAAACCATGTTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QTVELLKSEVWHRLISSCAQGCF*KPCFLP
Trigger: GGGGAGAAAACATGGTTTCCAAAAGCATCCCTGTGC...GCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGACTCGGCCTTGGGGCGCTTCTTCTCTGCCACATACAACAAGTGTGTCTCCGAATGGGGGATCAGAGATaGGTACTGCAGGTAGACAAT +
Preference number: 4 (lower is better)
Translates to: GLGLGALLLCHIQQVCLRMGDQR*VLQVDN
Trigger: ATTGTCTACCTGCAGTACCCATCTCTGATCCCCCAT...TCGGAGACACACTTGTTGTATGTGGCAGAGAAGAAGCGCCCCAAGGCCGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp GAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTCCCATAAGGGCCACATaGCTTGCATCAAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: EVGLGMVWYKVPAGTRLCPIRAT*LASKCS
Trigger: GGAACACTTTGATGCAAGCCATGTGGCCCTTATGGG...ACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp ACCCATAAGGGCCACATGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCGAAATGAAGCCACCATaGGAACCACCCATAAGGGCC +
Preference number: 4 (lower is better)
Translates to: THKGHMACIKVFLLEHLFEMKPP*EPPIRA
Trigger: GGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTC...GAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTATGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp ACCATGGGAACCACCCATAAGGGCCACATGGCTTGCATCAAAGTGTTCCTCCTGGGCCCTGTAGGTCTCTaGGTACTGACCAATCAAGTG +
Preference number: 4 (lower is better)
Translates to: TMGTTHKGHMACIKVFLLGPVGL*VLTNQV
Trigger: CACTTGATTGGTCAGTACCCAGAGACCTACAGGGCC...CAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp TTCTCTCCCAGCTGCCGAGGCACAACATCTACCACCACTGAGGTAACCTTGGTAACTGCAGGTAGACAATaGGACATTGGTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FSPSCRGTTSTTTEVTLVTAGRQ*DIGLGS
Trigger: TGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGT...TACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCCTCGGCAGCTGGGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp ACCATGGGAACCACCCATAAGGGCCACATGGCTTGCATCAAAGTGTTCCTCCTGTCAAGGCCAGCATACTaGACATTCTCTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TMGTTHKGHMACIKVFLLSRPAY*TFSCSG
Trigger: CCCAGAGCAAGAGAATGTGCAGTATGCTGGCCTTGA...CAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTATGGGTGGTTCCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp CCGTGGAGCCACGATAGTTCACTAGTAGTACCGCAAAGCCCATCTTGCAAAGCAAGGCTGCAGCAGGATTaGTTCAAAGTCAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PWSHDSSLVVPQSPSCKARLQQD*FKVKAS
Trigger: GCTGGCCTTGACTTTGAAGCAATCCTGCTGCAGCCT...TGCTTTGCAAGATGGGCTTTGCGGTACTACTAGTGAACTATCGTGGCTCCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp TTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACCCTGGTGGCCCACATTaGCTGGGAGGGAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LCLYRCFLAFASRKCVSDPGGPH*LGGRGC
Trigger: GCATCCTCTCCCTCCCAGGCAATGTGGGCCACCAGG...GTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTGAGCACCTGTTCCACTaGAAACTGGACATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSEHLFH*KLDILH
Trigger: GTGAAGGATGTCCAGTTTGCAGTGGAACAGGTGCTC...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp ACCCATAAGGGCCACATGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCGAGCACCTGTTCCACTaGAAACTGGACATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: THKGHMACIKVFLLEHLFEHLFH*KLDILH
Trigger: GTGAAGGATGTCCAGTTTGCAGTGGAACAGGTGCTC...GAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR GCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTCAGAAAGCCTCCTGCTaGCCTGCCAGACCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSQKASC*PARPLS
Trigger: GCTCAACGGTCTGGCAGGGCAGCAGGAGGCTTTCTG...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGGTTATGCCTGTACAGATaGTTCTTAGCCTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QDRQRLSLSLFPPFSHWRLCLYR*FLAFAS
Trigger: GGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAA...CCTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp ACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGTCCAGGGGCCCAAAATaGCTTGATGGCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSTTTEVTLVYQSYRHSWSRGPK*LDGLVW
Trigger: CCAGACCAAGCCATCAAGGCATTTTGGGCCCCTGGA...CCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp TCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCCACATACAACAAGTCTGGCTTCTTCAGCCTaGCTATCTCATCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: SERRTRPWGASSLPHTTSLASSA*LSHHRW
Trigger: CCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAG...ACTTGTTGTATGTGGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CCA 90 bp CACATGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTGCTTGCAAAGCATGGCTaGGAACAGCATCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HMACIKVFLLEHLFHCKLLAKHG*EQHPGS
Trigger: ACTGCCTGGATGCTGTTCCCAGCCATGCTTTGCAAG...CAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp TGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTGGACACCATCTTGCAAAGCATaGCTGGGAACAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: WLASKCSSWSTCSTANWTPSCKA*LGTASR
Trigger: CCTGGATGCTGTTCCCAGCCATGCTTTGCAAGATGG...TGTCCAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR TCA 90 bp TCGACATCCAGCACGCAGAGCACAGGGATGCTTTTGGAAACCATGTTTTCTCCCATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: STSSTQSTGMLLETMFSPMFLQR*QVEALE
Trigger: CTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACAT...GGGAGAAAACATGGTTTCCAAAAGCATCCCTGTGCTCTGCGTGCTGGATGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR TCA 90 bp CTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGCTTTGGTCTGAACATCTACCACCACTaGGGTAACCTTGGTATACCA +
Preference number: 4 (lower is better)
Translates to: LQPGYLIIAGTDVQGFGLNIYHH*GNLGIP
Trigger: TGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTT...CAGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTCTGACCCTCCAGCTGTaGGGGAGGTCACAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSLTLQL*GRSQCP
Trigger: TGGGCACTGTGACCTCCCTCACAGCTGGAGGGTCAG...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp ACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGGCACAGCTTTCATGGTaGCTGAAGGAGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSTTTEVTLVYQSYRHSWAQLSW*LKETLC
Trigger: GCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGC...CCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp GATGGGGGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCCGCAGAGCACAGGGATaGTTTTGGAAACCATGTTTT +
Preference number: 4 (lower is better)
Translates to: DGGSEMGTAGRQCDIGLGRRAQG*FWKPCF
Trigger: AAAACATGGTTTCCAAAAGCATCCCTGTGCTCTGCG...GCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR GCA 90 bp GTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGACCCACAACACTGACTaGTCCTTCCCTGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLIYYDYIAHIPLPTHPWTHNTD*SFPAEG
Trigger: GCCTTCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGT...CCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTAATGGGGGATCAGAGATaGGTACTGCAGGTAGACAAT +
Preference number: 4 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVMGDQR*VLQVDN
Trigger: ATTGTCTACCTGCAGTACCCATCTCTGATCCCCCAT...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACGTGGCCCACATTGCCTaGGAGGGAGAGGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LCLYRCFLAFASRKCVSDVAHIA*EGEDAV
Trigger: GACAGCATCCTCTCCCTCCCAGGCAATGTGGGCCAC...GTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TGGCTTGCATCAAAGTGTTCCTCCTGGAGCACCTGTTCCACTGCAAACTGGACACCCATAAGGGCCACATaGCTTGCATCAAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: WLASKCSSWSTCSTANWTPIRAT*LASKCS
Trigger: GGAACACTTTGATGCAAGCCATGTGGCCCTTATGGG...TGTCCAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CCA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTCTCCAGACATACTCTTaGGAAGGGTGGTACAGAGTA +
Preference number: 4 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSLQTYS*EGWYRV
Trigger: TACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAG...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTGTCCTAATTTATTATGACTTGCTAGGGCTCGGGTaGCTTGAGCCCAGCACACCC +
Preference number: 4 (lower is better)
Translates to: VWYKVPAGTRLCVLIYYDLLGLG*LEPSTP
Trigger: GGGTGTGCTGGGCTCAAGCCACCCGAGCCCTAGCAA...GTCATAATAAATTAGGACACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCCACATACAACAAGTAATGCCTTGATGGCTTaGTCTGGCTTCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SERRTRPWGASSLPHTTSNALMA*SGFFSL
Trigger: CAGGCTGAAGAAGCCAGACCAAGCCATCAAGGCATT...ACTTGTTGTATGTGGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR TCA 90 bp TTGGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAAACATCTACCACCACTaGGGTAACCTTGGTATACCA +
Preference number: 4 (lower is better)
Translates to: LVWLLQPGYLIIAGTDVQNIYHH*GNLGIP
Trigger: TGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTT...TTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR GCA 90 bp TGTGTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGGGGTCTCCACACTGTTaGCTGCAGGTCCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: CVLIYYDYIAHIPLPTHPGSPHC*LQVLQT
Trigger: TGTTTGCAGGACCTGCAGGCAACAGTGTGGAGACCC...CGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTGTCCTAATTTATTATGACCCGTGCCTCCAGCCTTaGGCAGCACAGCTTTCATGG +
Preference number: 4 (lower is better)
Translates to: VWYKVPAGTRLCVLIYYDPCLQP*AAQLSW
Trigger: CCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGG...GTCATAATAAATTAGGACACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGCACAACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACCAAGCACAGAGATGTTaGCACTCTCGACATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GTTSTTTEVTLVYQSYRHQAQRC*HSRHPA
Trigger: TGCTGGATGTCGAGAGTGGCAACATCTCTGTGCTTG...GTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR GCA 90 bp TTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACAACCGGAAGGGCTCATaGCACCAGCCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: LCLYRCFLAFASRKCVSDNRKGS*HQPTNT
Trigger: GGTGTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTT...GTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GGCACAACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACCCAAAGGCAGAAGGCTaGAGTAGATCCCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GTTSTTTEVTLVYQSYRHPKAEG*SRSQRS
Trigger: ACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGG...GTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR GCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTGTACAGAGTCCTGGTTaGCAGGACAGGCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSVQSPG*QDRQRL
Trigger: TAGCCTCTGCCTGTCCTGGCAACCAGGACTCTGTAC...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGATGCTTCTTAGCCTTTaGTTCCAGGAAATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VERQGLTLVLQTYSWEGWMLLSL*FQEMCQ
Trigger: CTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCAT...CCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp GTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGCTGGCTTCTTCAGCCTaGCTATCTCATCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: VLIYYDYIAHIPLPTHPWLASSA*LSHHRW
Trigger: CCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAG...CCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACTCCTTGACATCCTTCACATCCTaGTGGCCCACATTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LYRCFLAFASRKCVSDSLTSFTS*WPTLPG
Trigger: CCCAGGCAATGTGGGCCACCAGGATGTGAAGGATGT...CAAGGAGTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TGTGTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGAGTCAGGGATGTCAGTaGAGCCCAACATGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: CVLIYYDYIAHIPLPTHPSQGCQ*SPTWRR
Trigger: TCGCCTCCATGTTGGGCTCCACTGACATCCCTGACT...CGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTACACGCCGGTCCTCCTaGCCCAACATCAGTAACAGT +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSTRRSS*PNISNS
Trigger: ACTGTTACTGATGTTGGGCCAGGAGGACCGGCGTGT...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CTCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGGCAGGGAAGCTAGGCTaGTACAGAGTCCTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LFMPVQMLLSLCFQEMCQAGKLG*YRVLVA
Trigger: GGCAACCAGGACTCTGTACCAGCCTAGCTTCCCTGC...CTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp CTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACTCCTTGTCCAAGGCTTTGGTCTaGAAGAAGGACTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LYRCFLAFASRKCVSDSLSKALV*KKDSAL
Trigger: CAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGA...CAAGGAGTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp TGTGTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGCCTGAGGGATGTATCTaGTGGGCGATTTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CVLIYYDYIAHIPLPTHPPEGCI*WAICPA
Trigger: TGCTGGACAAATCGCCCATCAGATACATCCCTCAGG...CGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp TTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACGGGTGTGGAAAACTGTaGCACCATGAGGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LCLYRCFLAFASRKCVSDGCGKL*HHEVLV
Trigger: GACCAGGACCTCATGGTGGCACAGTTTTCCACACCC...GTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTCCGCAAAGCCCATCTTaGAAAGCATGGCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSPQSPS*KAWLGT
Trigger: TGTTCCCAGCCATGCTTTGCAAGATGGGCTTTGCGG...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTCATCATCGCTGGCACTaGCGTCCAAGGCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSHHRWH*RPRLWS
Trigger: AGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATG...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTGTCCTAATTTATTATGACGCACATTCCGGGTCTTaGGGGCACGGTAATACTCCA +
Preference number: 4 (lower is better)
Translates to: VWYKVPAGTRLCVLIYYDAHSGS*GHGNTP
Trigger: TGGAGTATTACCGTGCCCTCAAGACCCGGAATGTGC...GTCATAATAAATTAGGACACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp GTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTGTCCTAATTTATTATGACCAGGAAATGTGTCAGTaGCTCCTTGCTAGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VWYKVPAGTRLCVLIYYDQEMCQ*LLARAR
Trigger: CCGAGCCCTAGCAAGGAGTCACTGACACATTTCCTG...GTCATAATAAATTAGGACACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTCAAGCACAGAGATGTTaGCACTCTCGACATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSQAQRC*HSRHPA
Trigger: TGCTGGATGTCGAGAGTGGCAACATCTCTGTGCTTG...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CTCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGAAGTTCTCTCCCAGCTaGCGAGGCACAACATCTACC +
Preference number: 4 (lower is better)
Translates to: LFMPVQMLLSLCFQEMCQKFSPS*RGTTST
Trigger: GGTAGATGTTGTGCCTCGGCAGCTGGGAGAGAACTT...CTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTCCCTGGGACTACTTTTaGCCATGGGTGCCGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSPWDYF*PWVPWK
Trigger: TTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGG...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTCTTGATGGCTTGGTCTaGCTTCTTCAGCCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSLDGLV*LLQPGY
Trigger: ATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAG...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGGGTTGGAGGTAGGCTaGGTGTGGAAAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSGLEVG*VWKTVP
Trigger: TGGCACAGTTTTCCACACCCAGCCTACCTCCAACCC...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp CTCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGGAAATGAAGCCACCATaGGAACCACCCATAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LFMPVQMLLSLCFQEMCQEMKPP*EPPIRA
Trigger: GGCCCTTATGGGTGGTTCCCATGGTGGCTTCATTTC...CTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTCTCAAGAGCGAAGTGTaGCACAGGCTGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSLKSEV*HRLISS
Trigger: TGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAG...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp TGTGTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGAACATCTACCACCACTaGGGTAACCTTGGTATACCA +
Preference number: 4 (lower is better)
Translates to: CVLIYYDYIAHIPLPTHPNIYHH*GNLGIP
Trigger: TGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTT...CGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp GTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTGTCCTAATTTATTATGACGGGGCGCTTCTTCTCTaGCACATACAACAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VWYKVPAGTRLCVLIYYDGALLL*HIQQVC
Trigger: ACACACTTGTTGTATGTGGCAGAGAAGAAGCGCCCC...GTCATAATAAATTAGGACACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTAGGTGGGGTTGGGGATaGTTTGGTACAAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSRWGWG*FGTKYQ
Trigger: CTGGTACTTTGTACCAAACCATCCCCAACCCCACCT...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTCTGATAATGCGTGGGTaGTTTTGGGATAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSLIMRG*FWDRAG
Trigger: TCCTGCTCTATCCCAAAAGCACCCACGCATTATCAG...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR TCA 90 bp TGTGTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGTCCTAATTTATTATaGCTACATAGCCCACATTCC +
Preference number: 4 (lower is better)
Translates to: CVLIYYDYIAHIPLPTHPCPNLL*LHSPHS
Trigger: GGAATGTGGGCTATGTAGTCATAATAAATTAGGACA...CGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR GCA 90 bp CTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGAGTCATGTTTCCTCTTTATaGCTGTACAGATGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LIYYDYIAHIPLPTHPWSHVSSL*LYRCFL
Trigger: TAAGAAGCATCTGTACAGGCATAAAGAGGAAACATG...ACTCCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CCA 90 bp TCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTTACTCTTGGGAAGGGTaGTACAGAGTAGTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: SLCLYRCFLAFASRKCVSYSWEG*YRVVAN
Trigger: ATTAGCAACTACTCTGTACCACCCTTCCCAAGAGTA...ACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS CCA 90 bp TGCGTGGTGACCTCCGGGCCCAGGCAGGCGGCGCTCAGCGCGGGCTaGCGGCTAAGGCCCCGATACAGAGCCGCCGCCTCCTCGGGCTCG +
Preference number: 5 (lower is better)
Translates to: CVVTSGPRQAALSAG*RLRPRYRAAASSGS
Trigger: CGAGCCCGAGGAGGCGGCGGCTCTGTATCGGGGCCTTAGCCGCCAGCCCGCGCTGAGCGCCGCCTGCCTGGGCCCGGAGGTCACCACGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000447436.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
ENST00000463995.5
ENST00000491799.5
CDS TCA 90 bp TCCACTCAGTGTGCACCGTCCGGTATTGGCCGCCGTACTGCGTGGTaGCCTCCGGGCCCAGGCAGGCGGCGCTCAGCGCGGGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: STQCAPSGIGRRTAW*PPGPGRRRSARAGG
Trigger: GCCGCCAGCCCGCGCTGAGCGCCGCCTGCCTGGGCCCGGAGGTCACCACGCAGTACGGCGGCCAATACCGGACGGTGCACACTGAGTGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
CDS TCA 90 bp AGCAGTCAGTGTGCACCGTCCGGTATTGGCCGCCGTACTGCGTGGTaGCCTCCGGGCCCAGGCAGGCGGCGCTCAGCGCGGGCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: SSQCAPSGIGRRTAW*PPGPGRRRSARAGG
Trigger: GCCGCCAGCCCGCGCTGAGCGCCGCCTGCCTGGGCCCGGAGGTCACCACGCAGTACGGCGGCCAATACCGGACGGTGCACACTGACTGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447436.5
ENST00000463995.5
ENST00000491799.5
CDS GCA 90 bp CCCCAGGGCCCGTGCCTCCAGCCTTGCGCAGCACAGCTTTCATGGTaGCTGAAGGAGACTCTCTGCTCAGCAGTCGAGGGGCGAGGCGTT +
Preference number: 5 (lower is better)
Translates to: PQGPCLQPCAAQLSW*LKETLCSAVEGRGV
Trigger: AACGCCTCGCCCCTCGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGGGCCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449966.5
CDS CCA 90 bp CTTCCCCAGGGCCCGTGCCTCCAGCCTTGCGCAGCACAGCTTTCATaGTGCCTGAAGGAGACTCTCTGCTCAGCAGTCGAGGGGCGAGGC +
Preference number: 5 (lower is better)
Translates to: LPQGPCLQPCAAQLS*CLKETLCSAVEGRG
Trigger: GCCTCGCCCCTCGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGGGCCCTGGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449966.5
CDS TCA 90 bp CCGAGCAGTCAGGGATGTCAGTGGAGCCCAACATGGAGGCGATGTTaGTCACGGGGTTCCGGGCCACGCAGGCCCTGTAGGTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PSSQGCQWSPTWRRC*SRGSGPRRPCRSLG
Trigger: ACCCAGAGACCTACAGGGCCTGCGTGGCCCGGAACCCCGTGATCAACATCGCCTCCATGTTGGGCTCCACTGACATCCCTGACTGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438011.5
CDS TCA 90 bp AGGGCCCGTGCCTCCAGCCTTGCGCAGCACAGCTTTCATGGTGCCTaGAGGAGACTCTCTGCTCAGCAGTCGAGGGGCGAGGCGTTGGAT +
Preference number: 5 (lower is better)
Translates to: RARASSLAQHSFHGA*RRLSAQQSRGEALD
Trigger: ATCCAACGCCTCGCCCCTCGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449966.5
CDS GCA 90 bp TCTGACAGGCACAGTATGGGAAGGGAGCACACTGAGCCCCAGGGCTaGCCTGCCGGGCCTTCGTGGATTGACCACGAGCACCTTGATGGC +
Preference number: 5 (lower is better)
Translates to: SDRHSMGREHTEPQG*PAGPSWIDHEHLDG
Trigger: GCCATCAAGGTGCTCGTGGTCAATCCACGAAGGCCCGGCAGGGCAGCCCTGGGGCTCAGTGTGCTCCCTTCCCATACTGTGCCTGTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463995.5
ENST00000483715.5
CDS-3UTR CAA 90 bp TGCCCACTTGGGTGTCCACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAGTAAGAAGGACTCGGCCTaGGGGCGCTTCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: CPLGCPQQTGPAGCAEPSKKDSA*GRFFSA
Trigger: GGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTT...ACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS GCA 90 bp GGGGAGTCAACACTGGGCTTTTCCTGGGCCCTCAGGTGGCAGAGCTaGCTCTGCCTGAGACAGGCACCCAAGGTTTGCAGAGCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: GESTLGFSWALRWQS*LCLRQAPKVCRARR
Trigger: CCTTCTCGCTCTGCAAACCTTGGGTGCCTGTCTCAGGCAGAGGCAGCTCTGCCACCTGAGGGCCCAGGAAAAGCCCAGTGTTGACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS CCA 90 bp CTTCCCCAGGGCCCGTGCCTCCAGCCTTGCGCAGCACAGCTTTCATaGTGCCTGAAGGAGACTCTCTGCTCAGCAGTCTGTGGACATGGG +
Preference number: 5 (lower is better)
Translates to: LPQGPCLQPCAAQLS*CLKETLCSAVCGHG
Trigger: CCCATGTCCACAGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGGGCCCTGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS-3UTR CAA 90 bp CAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAGTCAAAGACCACTCTCTGGCAAGAAGGACTCGGCCTaGGGGCGCTTCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QQTGPAGCAEPSQRPLSGKKDSA*GRFFSA
Trigger: GGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTT...GCCAGAGAGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CAA 90 bp GGGCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCAGGGCTGACCTGCGATaGGTGCAAAAGCGGATGCCC +
Preference number: 5 (lower is better)
Translates to: GLTCDWCKSGCPTGRAHARADLR*VQKRMP
Trigger: GGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT...GGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CAA 90 bp TGCCCACTTGGGTGTCCACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAGTGCACAGCTGGCTGCATaGGTGATGGGGGATCAGAGA +
Preference number: 5 (lower is better)
Translates to: CPLGCPQQTGPAGCAEPSAQLAA*VMGDQR
Trigger: TCTCTGATCCCCCATCACCAATGCAGCCAGCTGTGC...ACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CAA 90 bp CCCACATTGCCTGGGAGGGAGAGGATGCTGTCCTGGCCAAAGCCCGTGGAGCCAGACCACCATGGGCACTaGGGTCTTATCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: PTLPGRERMLSWPKPVEPDHHGH*GLIWRA
Trigger: AGCCCTCCAGATAAGACCCAAGTGCCCATGGTGGTC...TGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CAA 90 bp CACAGTGCCCACTTGGGTGTCCACAGCAAACAGGTCCTGCCGGCTGCGCTGAGCGGGGCCCAAAATGCCTaGATGGCTTGGTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: HSAHLGVHSKQVLPAALSGAQNA*MAWSGF
Trigger: GAAGCCAGACCAAGCCATCAAGGCATTTTGGGCCCC...GCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CAA 90 bp CCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTGTGCACCGTCCGGTATaGGCCGCCGTACTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: PMGAVERQGLTLVLQTYSVHRPV*AAVLRG
Trigger: ACCACGCAGTACGGCGGCCAATACCGGACGGTGCAC...AGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp CTTCTCTGCCACATACAACAAGTGTGTCTCCGAGTGCGACCAGGACAGGCAGCCGTGCACCGTCCGGTATaGGCCGCCGTACTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: LLCHIQQVCLRVRPGQAAVHRPV*AAVLRG
Trigger: ACCACGCAGTACGGCGGCCAATACCGGACGGTGCAC...GGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447436.5
CDS-3UTR CAA 90 bp AAAGCCTCCTGCTGCCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCAGGGCTGACCTGCGATaGGTGCAAAAGCGGATGCCC +
Preference number: 5 (lower is better)
Translates to: KASCCPARPLSSSRAKCGRADLR*VQKRMP
Trigger: GGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT...GCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGGCAGCAGGAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp GCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACCAGCCCACGGTCACAGTGCCCACTaGGGTGTCCACAGCAAACAG +
Preference number: 5 (lower is better)
Translates to: AIGAKADAQPEGLMPPAHGHSAH*GVHSKQ
Trigger: CTGTTTGCTGTGGACACCCAAGTGGGCACTGTGACC...GTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS TCA 90 bp GATGTCGGGAATGGGCTCGGCCTCCTCCAGGGACACCCACAACACTaGCTGCTCCTTCCCTGCAGAAGGCAGGAACCCAACTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: DVGNGLGLLQGHPQH*LLLPCRRQEPNFQG
Trigger: ACCCTGAAAGTTGGGTTCCTGCCTTCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTCCCGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000469362.6
CDS GCA 90 bp TCGGGAATGGGCTCGGCCTCCTCCAGGGACACCCACAACACTGACTaGTCCTTCCCTGCAGAAGGCAGGAACCCAACTTTCAGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: SGMGSASSRDTHNTD*SFPAEGRNPTFRVG
Trigger: TCCAACCCTGAAAGTTGGGTTCCTGCCTTCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000469362.6
CDS GCA 90 bp ACATTTAAGGTTGGAGGGTCCTCCTGTGCTCACCTGCCCACCAGCTaGCAGGGCCTTCATGCTGCACTCACCGAACAGGCACATTCCGGG +
Preference number: 5 (lower is better)
Translates to: TFKVGGSSCAHLPTS*QGLHAALTEQAHSG
Trigger: CCCGGAATGTGCCTGTTCGGTGAGTGCAGCATGAAGGCCCTGGCAGCTGGTGGGCAGGTGAGCACAGGAGGACCCTCCAACCTTAAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480772.1
CDS GCA 90 bp CGTCATGGAACACCAGGTATTGGCGGCAGAATCGAATGTTCTCCATaGGTTCCAGGTCCCTCTGGGTCCACTCGAGGGGCGAGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: RHGTPGIGGRIECSP*VPGPSGSTRGARRW
Trigger: CCAACGCCTCGCCCCTCGAGTGGACCCAGAGGGACCTGGAACGCATGGAGAACATTCGATTCTGCCGCCAATACCTGGTGTTCCATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS CCA 90 bp CTCCTGCTGCCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTaGCACAGGCTGATCAGCTCATGCAGAATGGCAGGGCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LLLPCQTVELLKSEV*HRLISSCRMAGLQL
Trigger: CAGCTGAAGCCCTGCCATTCTGCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGGCAGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000480772.1
CDS CCA 90 bp GCCCTGCCGGGCCTTCGTGGATTGACCACGAGCACCTTGATGGCTTaGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: ALPGLRGLTTSTLMA*SGFFSLAISSSLAL
Trigger: CAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAGGTGCTCGTGGTCAATCCACGAAGGCCCGGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463995.5
ENST00000483715.5
CDS-3UTR CAA 90 bp GCTGACCTGCGATTGGTGCAAAAGCGGATGCCCAACCGGAAGGGCTCATGCCACTCCAGCGCTGACAGGTaGAAGCTCTTGAGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: ADLRLVQKRMPNRKGSCHSSADR*KLLSFR
Trigger: CCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGA...GTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CAA 90 bp GCCTGTCCAGGGGACACATTCTCAGGGACCCCCTCAAGCACAGAGATGTTGCCAAGGGCTGACCTGCGATaGGTGCAAAAGCGGATGCCC +
Preference number: 5 (lower is better)
Translates to: ACPGDTFSGTPSSTEMLPRADLR*VQKRMP
Trigger: GGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT...TGGCAACATCTCTGTGCTTGAGGGGGTCCCTGAGAATGTGTCCCCTGGACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS-3UTR CAA 90 bp CCGGGCCACGCAGGCCCTGTAGGTCTCTGGGTACTGACCAATCAAGTGGCAGGAACCGCAAAGCCCATCTaGCAAAGCATGGCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: PGHAGPVGLWVLTNQVAGTAKPI*QSMAGN
Trigger: GTTCCCAGCCATGCTTTGCAAGATGGGCTTTGCGGT...TCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGGGCCTGCGTGGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS-3UTR CAA 90 bp CCAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGAACATGGAGGCGATGTaGATCACGGGGTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PGQAEAKPLTVPSLLTLENMEAM*ITGFRA
Trigger: GGCCCGGAACCCCGTGATCAACATCGCCTCCATGTT...CTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp GGGCCACGCAGGCCCTGTAGGTCTCTGGGTACTGACCAATCAAGTGGCAGGAAAAACATGGAGGCGATGTaGATCACGGGGTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GPRRPCRSLGTDQSSGRKNMEAM*ITGFRA
Trigger: GGCCCGGAACCCCGTGATCAACATCGCCTCCATGTT...TTTCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGGGCCTGCGTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS TCA 90 bp CCCCCGGGTCTCCACACTGTTGCCTGCAGGTCCTGCAAACACCACTaGGTCCCCGTCATGGAACACCAGGTATTGGCGGCAGAATCGAAT +
Preference number: 5 (lower is better)
Translates to: PPGLHTVACRSCKHH*VPVMEHQVLAAESN
Trigger: ATTCGATTCTGCCGCCAATACCTGGTGTTCCATGACGGGGACTCAGTGGTGTTTGCAGGACCTGCAGGCAACAGTGTGGAGACCCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
ENST00000483715.5
CDS TCA 90 bp CCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTaGTCAGCTCATGCAGAATGGCAGGGCTTCAGCTGCCCAAGTGTG +
Preference number: 5 (lower is better)
Translates to: PARPLSSSRAKCGTG*SAHAEWQGFSCPSV
Trigger: CACACTTGGGCAGCTGAAGCCCTGCCATTCTGCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000480772.1
CDS GCA 90 bp TCAACACTGGGCTTTTCCTGGGCCCTCAGGTGGCAGAGCTGCCTCTaGCTGAGACAGGCACCCAAGGTTTGCAGAGCGAGAAGGATGAGT +
Preference number: 5 (lower is better)
Translates to: STLGFSWALRWQSCL*LRQAPKVCRARRMS
Trigger: ACTCATCCTTCTCGCTCTGCAAACCTTGGGTGCCTGTCTCAGGCAGAGGCAGCTCTGCCACCTGAGGGCCCAGGAAAAGCCCAGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS CCA 90 bp GCCGGGCCTTCGTGGATTGACCACGAGCACCTTGATGGCTTGGTCTaGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTC +
Preference number: 5 (lower is better)
Translates to: AGPSWIDHEHLDGLV*LLQPGYLIIAGTDV
Trigger: GACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAGGTGCTCGTGGTCAATCCACGAAGGCCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463995.5
ENST00000483715.5
CDS-3UTR CAA 90 bp GGACTACTTTTGCCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCGGGTCTCCACACTGTaGCCTGCAGGTCCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: GLLLPMGAVERQGLTLVLRVSTL*PAGPAN
Trigger: GTTTGCAGGACCTGCAGGCAACAGTGTGGAGACCCG...GAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGGCAAAAGTAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp CAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGCCGGGGTCCAGCGCTGACAGGTaGAAGCTCTTGAGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: QRWVLQVDNATLVWAQPGSSADR*KLLSFR
Trigger: CCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGA...CCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CAA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTGCCCTGCCAGACCGTaGAGCTCCTCAAGAGCGAAG +
Preference number: 5 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGCPARP*SSSRAK
Trigger: CTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGGCA...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS GCA 90 bp GTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCTCATaGAGAATGGCAGGGCTTCAGCTGCCCAAGTGTGTGCGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: VELLKSEVWHRLISS*RMAGLQLPKCVRSQ
Trigger: CTGGCTACGCACACACTTGGGCAGCTGAAGCCCTGCCATTCTGCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000480772.1
CDS-3UTR CAA 90 bp GTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTTCCAGCGCTGACAGGTaGAAGCTCTTGAGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: VGGGVGDGLVQSTSRNQASSADR*KLLSFR
Trigger: CCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGA...AGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp GAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTAAGAAGGACTCGGCCTaGGGGCGCTTCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: EVGLGMVWYKVPAGTRLCKKDSA*GRFFSA
Trigger: GGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTT...ACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp TGGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGAGGGCTGACCTGCGATaGGTGCAAAAGCGGATGCCC +
Preference number: 5 (lower is better)
Translates to: WSGFFSLAISSSLALTSKRADLR*VQKRMP
Trigger: GGGCATCCGCTTTTGCACCAATCGCAGGTCAGCCCT...CTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CAA 90 bp GATGGGGGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCGTAGACAATGCGACATaGGTCTGGGCTCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: DGGSEMGTAGRQCDIGLGVDNAT*VWAQPG
Trigger: CCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTAC...GCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CAA 90 bp GTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCTGACCACCATGGGCACTaGGGTCTTATCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: VGGGVGDGLVQSTSRNQADHHGH*GLIWRA
Trigger: AGCCCTCCAGATAAGACCCAAGTGCCCATGGTGGTC...AGCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp CAGCAAACAGGTCCTGCCGGCTGCGCTGAGCCGAGTCAAAGACCACTCTCTGGCAAATGCCTTGATGGCTaGGTCTGGCTTCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: QQTGPAGCAEPSQRPLSGKCLDG*VWLLQP
Trigger: AGGCTGAAGAAGCCAGACCAAGCCATCAAGGCATTT...GCCAGAGAGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS TCA 90 bp GGCTTCAGCTGCCCAAGTGTGTGCGTAGCCAGAGCACAGCATTCATaGAGCTGTCTGACTCCACCTCCACCTCTGATAATGCGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: GFSCPSVCVARAQHS*SCLTPPPPLIMRGC
Trigger: GCACCCACGCATTATCAGAGGTGGAGGTGGAGTCAGACAGCTTCATGAATGCTGTGCTCTGGCTACGCACACACTTGGGCAGCTGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000480772.1
CDS TCA 90 bp GACCTGTTAGTAAAGGCTGTGGAACAGTCAGTGGTGCTGAGTGGCTaGGAATGCCATCACTGCCCCACATGTTGGAGCTCCAGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: DLLVKAVEQSVVLSG*ECHHCPTCWSSSPP
Trigger: CGGGGGACTGGAGCTCCAACATGTGGGGCAGTGATGGCATTCTCAGCCACTCAGCACCACTGACTGTTCCACAGCCTTTACTAACAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS TCA 90 bp CTACTCTCTGCAACTCCCCAGGCCACCATGGGCTCTAGTCCAGGCTaGGTTTGGAGCAAGCTTCCAGTGCTTATCAGGCCATGTCACCAG +
Preference number: 5 (lower is better)
Translates to: LLSATPQATMGSSPG*VWSKLPVLIRPCHQ
Trigger: CTGGTGACATGGCCTGATAAGCACTGGAAGCTTGCTCCAAACTCAGCCTGGACTAGAGCCCATGGTGGCCTGGGGAGTTGCAGAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS GCA 90 bp ATTAGTCAGCAACATTTAAGGTTGGAGGGTCCTCCTGTGCTCACCTaGCCACCAGCTGCCAGGGCCTTCATGCTGCACTCACCGAACAGG +
Preference number: 5 (lower is better)
Translates to: ISQQHLRLEGPPVLT*PPAARAFMLHSPNR
Trigger: CCTGTTCGGTGAGTGCAGCATGAAGGCCCTGGCAGCTGGTGGGCAGGTGAGCACAGGAGGACCCTCCAACCTTAAATGTTGCTGACTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480772.1
CDS CCA 90 bp GGTCCTGCAAACACCACTGAGTCCCCGTCATGGAACACCAGGTATTaGCGGCAGAATCGAATGTTCTCCATGCGTTCCAGGTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GPANTTESPSWNTRY*RQNRMFSMRSRSLW
Trigger: CCAGAGGGACCTGGAACGCATGGAGAACATTCGATTCTGCCGCCAATACCTGGTGTTCCATGACGGGGACTCAGTGGTGTTTGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
ENST00000483715.5
CDS-3UTR CAA 90 bp CCCATGGGTGCCGTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTATCCCCCTTGATGGCTaGGTCTGGCTTCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: PMGAVERQGLTLVLQTYSIPLDG*VWLLQP
Trigger: AGGCTGAAGAAGCCAGACCAAGCCATCAAGGGGGAT...AGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCACGGCACCCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp TCTCCCAGCTGCCGAGGCACAACATCTACCACCACTGAGGTAACCTTGGTATACGTAGACAATGCGACATaGGTCTGGGCTCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SPSCRGTTSTTTEVTLVYVDNAT*VWAQPG
Trigger: CCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTAC...GTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCCTCGGCAGCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CAA 90 bp TGGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGCACAGCTGGCTGCATaGGTGATGGGGGATCAGAGA +
Preference number: 5 (lower is better)
Translates to: WSGFFSLAISSSLALTSKAQLAA*VMGDQR
Trigger: TCTCTGATCCCCCATCACCAATGCAGCCAGCTGTGC...CTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CAA 90 bp CCCAACCAAGGCAATGTCCCTGGGACTACTTTTGCCCATGGGTGCCGTGGAAAGCAGGCTGCAGCAGGATaGCTTCAAAGTCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: PNQGNVPGTTFAHGCRGKQAAAG*LQSQGQ
Trigger: CTGGCCTTGACTTTGAAGCAATCCTGCTGCAGCCTG...CTTTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGACATTGCCTTGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCACCGCAAAGCCCATCTaGCAAAGCATGGCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGTAKPI*QSMAGN
Trigger: GTTCCCAGCCATGCTTTGCAAGATGGGCTTTGCGGT...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp CCAGGACAGGCAGAGGCTAAGCCTCTCACTGTTCCCTCCCTTCTCACACTGGAGCCTCCAGACATACTCTaGGGAAGGGTGGTACAGAGT +
Preference number: 5 (lower is better)
Translates to: PGQAEAKPLTVPSLLTLEPPDIL*GRVVQS
Trigger: ACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGG...CTCCAGTGTGAGAAGGGAGGGAACAGTGAGAGGCTTAGCCTCTGCCTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp TCACTGCTGAAAGGAAAGCCAGCCTCCACCACGCACCAGTCAGGGATGTCAGTGACTTCCAGCTCCCACTaGGGTGTCCACAGCAAACAG +
Preference number: 5 (lower is better)
Translates to: SLLKGKPASTTHQSGMSVTSSSH*GVHSKQ
Trigger: CTGTTTGCTGTGGACACCCAAGTGGGAGCTGGAAGT...CACTGACATCCCTGACTGGTGCGTGGTGGAGGCTGGCTTTCCTTTCAGCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS TCA 90 bp GAGCAAGCTTCCAGTGCTTATCAGGCCATGTCACCAGAAACTGAATaGGCTCCCAAGGGGGCAAGAACCTGGCTGCTGGCCTCCCTTCTA +
Preference number: 5 (lower is better)
Translates to: EQASSAYQAMSPETE*APKGARTWLLASLL
Trigger: TAGAAGGGAGGCCAGCAGCCAGGTTCTTGCCCCCTTGGGAGCTCATTCAGTTTCTGGTGACATGGCCTGATAAGCACTGGAAGCTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS GCA 90 bp CTCAGGTGGCAGAGCTGCCTCTGCCTGAGACAGGCACCCAAGGTTTaGAGAGCGAGAAGGATGAGTCTGGCAGATCTTGATAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LRWQSCLCLRQAPKV*RARRMSLADLDKRE
Trigger: CTCTCTCTTATCAAGATCTGCCAGACTCATCCTTCTCGCTCTGCAAACCTTGGGTGCCTGTCTCAGGCAGAGGCAGCTCTGCCACCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS GCA 90 bp CAGCCTTGCGCAGCACAGCTTTCATGGTGCCTGAAGGAGACTCTCTaGTCAGCAGTCTGTGGACATGGGGTAGCACAGGTCAGGATTATC +
Preference number: 5 (lower is better)
Translates to: QPCAAQLSWCLKETL*SAVCGHGVAQVRII
Trigger: GATAATCCTGACCTGTGCTACCCCATGTCCACAGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS CCA 90 bp GTTGGAGGTAGGCTGGGTGTGGAAAACTGTGCCACCATGAGGTCCTaGTCAATTGTGAGCAACTTCCAGCTCCCACTTGGGTGTCCACAG +
Preference number: 5 (lower is better)
Translates to: VGGRLGVENCATMRS*SIVSNFQLPLGCPQ
Trigger: CTGTGGACACCCAAGTGGGAGCTGGAAGTTGCTCACAATTGACCAGGACCTCATGGTGGCACAGTTTTCCACACCCAGCCTACCTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS CCA 90 bp TGGGGACCTGTTAGTAAAGGCTGTGGAACAGTCAGTGGTGCTGAGTaGCTGAGAATGCCATCACTGCCCCACATGTTGGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: WGPVSKGCGTVSGAE*LRMPSLPHMLELQS
Trigger: GGACTGGAGCTCCAACATGTGGGGCAGTGATGGCATTCTCAGCCACTCAGCACCACTGACTGTTCCACAGCCTTTACTAACAGGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS-3UTR CAA 90 bp CCCTGCCAGACCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCATGGAACACCAGGTATaGGCGGCAGAATCGAATGTT +
Preference number: 5 (lower is better)
Translates to: PCQTVELLKSEVWHRLISMEHQV*AAESNV
Trigger: AACATTCGATTCTGCCGCCAATACCTGGTGTTCCAT...GCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGGTCTGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp AGTGGGAGGTGGGGTTGGGGATGGTTTGGTACAAAGTACCAGCAGGAACCAGGCGACAGGTTGAAGCTCTaGAGCTTCCGGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SGRWGWGWFGTKYQQEPGDRLKL*SFRFFS
Trigger: GGAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTC...GCCTGGTTCCTGCTGGTACTTTGTACCAAACCATCCCCAACCCCACCTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp TCTCCCAGCTGCCGAGGCACAACATCTACCACCACTGAGGTAACCTTGGTATACTCCAGCGCTGACAGGTaGAAGCTCTTGAGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SPSCRGTTSTTTEVTLVYSSADR*KLLSFR
Trigger: CCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGA...GTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCCTCGGCAGCTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CAA 90 bp GGCTGCGCTGAGCCGAGTCAAAGACCACTCTCTGGCTGTCAGCTGACCAGCATCACCACTGAGGTAACCTaGGTATACCAGTCATACAGG +
Preference number: 5 (lower is better)
Translates to: GCAEPSQRPLSGCQLTSITTEVT*VYQSYR
Trigger: CCTGTATGACTGGTATACCAAGGTTACCTCAGTGGT...GATGCTGGTCAGCTGACAGCCAGAGAGTGGTCTTTGACTCGGCTCAGCGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CAA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTAGGTCACAGTGCCCACTaGGGTGTCCACAGCAAACAG +
Preference number: 5 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVGHSAH*GVHSKQ
Trigger: CTGTTTGCTGTGGACACCCAAGTGGGCACTGTGACC...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp GTGGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGGGGGTTGGGGATGGTTaGGTACAAAGTACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VERQGLTLVLQTYSWEGWGVGDG*VQSTSR
Trigger: CCTGCTGGTACTTTGTACCAAACCATCCCCAACCCC...CCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCCAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp GGAAAGACAGGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTATCCCTGGGACTACTTTaGCCCATGGGTGCCGTGGAA +
Preference number: 5 (lower is better)
Translates to: GKTGPHTSPPDILLGRVVSLGLL*PMGAVE
Trigger: TTCCACGGCACCCATGGGCAAAAGTAGTCCCAGGGA...TACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCCTGTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTTGTGTCAGTGACTCCTaGCTAGGGCTCGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSCVSDS*LGLGWL
Trigger: AAGCCACCCGAGCCCTAGCAAGGAGTCACTGACACA...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp TTGGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGGGCCCAAAATGCCTaGATGGCTTGGTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LVWLLQPGYLIIAGTDVQGAQNA*MAWSGF
Trigger: GAAGCCAGACCAAGCCATCAAGGCATTTTGGGCCCC...TTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS CCA 90 bp ACACTGTTGCCTGCAGGTCCTGCAAACACCACTGAGTCCCCGTCATaGAACACCAGGTATTGGCGGCAGAATCGAATGTTCTCCATGCGT +
Preference number: 5 (lower is better)
Translates to: TLLPAGPANTTESPS*NTRYWRQNRMFSMR
Trigger: ACGCATGGAGAACATTCGATTCTGCCGCCAATACCTGGTGTTCCATGACGGGGACTCAGTGGTGTTTGCAGGACCTGCAGGCAACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
ENST00000483715.5
CDS CCA 90 bp AAGCTAGTCTGTTGGTTGGGTAAGGGTCTGCACAGACAGGGGCCTTaGGGACCTGTTAGTAAAGGCTGTGGAACAGTCAGTGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: KLVCWLGKGLHRQGP*GPVSKGCGTVSGAE
Trigger: CTCAGCACCACTGACTGTTCCACAGCCTTTACTAACAGGTCCCCAAGGCCCCTGTCTGTGCAGACCCTTACCCAACCAACAGACTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS-3UTR CAA 90 bp GGCACAACATCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACGTAGACAATGCGACATaGGTCTGGGCTCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GTTSTTTEVTLVYQSYRHVDNAT*VWAQPG
Trigger: CCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTAC...GTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CAA 90 bp TCTACCACCACTGAGGTAACCTTGGTATACCAGTCATACAGGCACAGCTGGCTGGCACAGCTGGCTGCATaGGTGATGGGGGATCAGAGA +
Preference number: 5 (lower is better)
Translates to: STTTEVTLVYQSYRHSWLAQLAA*VMGDQR
Trigger: TCTCTGATCCCCCATCACCAATGCAGCCAGCTGTGC...CAGCCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS-3UTR CAA 90 bp GTCCAAGGCTTTGGTCTGAAAGAAGGACTCGGCCTTGGGGCGCTTCTTCTCTGCAAATGCCTTGATGGCTaGGTCTGGCTTCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: VQGFGLKEGLGLGALLLCKCLDG*VWLLQP
Trigger: AGGCTGAAGAAGCCAGACCAAGCCATCAAGGCATTT...GCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS TCA 90 bp AGATGCCTCACCATCCTCATAAACAGGCCCATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAGCTTCCGGTTCTTCTCCCAGACCTC +
Preference number: 5 (lower is better)
Translates to: RCLTILINRPMFLQR*QVEALELPVLLPDL
Trigger: GAGGTCTGGGAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACATGGGCCTGTTTATGAGGATGGTGAGGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463616.1
CDS-3UTR CAA 90 bp GTCCTAATTTATTATGACTACATAGCCCACATTCCTCTGCCCACGCATCCGTGGGGTACAGAGTCCTGGTaGCCAGGACAGGCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: VLIYYDYIAHIPLPTHPWGTESW*PGQAEA
Trigger: AGCCTCTGCCTGTCCTGGCAACCAGGACTCTGTACC...CCACGGATGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp CTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACTCCTTGGTAGACAATGCGACATaGGTCTGGGCTCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LYRCFLAFASRKCVSDSLVDNAT*VWAQPG
Trigger: CCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTAC...CAAGGAGTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp GGGGATCAGAGATGGGTACTGCAGGTAGACAATGCGACATTGGTCTGGGCTCAGACCACTGAGGTAACCTaGGTATACCAGTCATACAGG +
Preference number: 5 (lower is better)
Translates to: GDQRWVLQVDNATLVWAQTTEVT*VYQSYR
Trigger: CCTGTATGACTGGTATACCAAGGTTACCTCAGTGGT...CTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446089.5
ENST00000447436.5
ENST00000447541.5
CDS CCA 90 bp ACAGCTTTCATGGTGCCTGAAGGAGACTCTCTGCTCAGCAGTCTGTaGACATGGGGTAGCACAGGTCAGGATTATCTTGCAATAACCCCT +
Preference number: 5 (lower is better)
Translates to: TAFMVPEGDSLLSSL*TWGSTGQDYLAITP
Trigger: AGGGGTTATTGCAAGATAATCCTGACCTGTGCTACCCCATGTCCACAGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS-3UTR CAA 90 bp GGGCCTCACACTAGTCCTCCAGACATACTCTTGGGAAGGGTGGTACAGAGTAGTACCACTGAGGTAACCTaGGTATACCAGTCATACAGG +
Preference number: 5 (lower is better)
Translates to: GPHTSPPDILLGRVVQSSTTEVT*VYQSYR
Trigger: CCTGTATGACTGGTATACCAAGGTTACCTCAGTGGT...ACTACTCTGTACCACCCTTCCCAAGAGTATGTCTGGAGGACTAGTGTGAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp CAGCCTGGCTATCTCATCATCGCTGGCACTGACGTCCAAGGCTTTGGTCTGAAAACCACTGAGGTAACCTaGGTATACCAGTCATACAGG +
Preference number: 5 (lower is better)
Translates to: QPGYLIIAGTDVQGFGLKTTEVT*VYQSYR
Trigger: CCTGTATGACTGGTATACCAAGGTTACCTCAGTGGT...TTTCAGACCAAAGCCTTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446089.5
ENST00000447436.5
CDS-3UTR CAA 90 bp GTTTGGTACAAAGTACCAGCAGGAACCAGGCTCTGTGTCCTAATTTATTATGACTACTCCATGCCCTGCTaGAAGGGCACACGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: VWYKVPAGTRLCVLIYYDYSMPC*KGTRRS
Trigger: GGACCGGCGTGTGCCCTTCAAGCAGGGCATGGAGTA...GTCATAATAAATTAGGACACAGAGCCTGGTTCCTGCTGGTACTTTGTACCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp CTCTTTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGGCACAGCTGGCTGCATaGGTGATGGGGGATCAGAGA +
Preference number: 5 (lower is better)
Translates to: LFMPVQMLLSLCFQEMCQAQLAA*VMGDQR
Trigger: TCTCTGATCCCCCATCACCAATGCAGCCAGCTGTGC...CTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS-3UTR CAA 90 bp TTATGCCTGTACAGATGCTTCTTAGCCTTTGCTTCCAGGAAATGTGTCAGTGACAGGCAGATGAAGCCCTaGTGGCTGCCACACCCAGAA +
Preference number: 5 (lower is better)
Translates to: LCLYRCFLAFASRKCVSDRQMKP*WLPHPE
Trigger: TTCTGGGTGTGGCAGCCACAAGGGCTTCATCTGCCT...GTCACTGACACATTTCCTGGAAGCAAAGGCTAAGAAGCATCTGTACAGGCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296456.10
CDS TCA 72 bp TGTGCACCGTCCGGTATTGGCCGCCGTACTGCGTGGTaGCCTCCGGGCCCAGGCAGGCGGCGCTCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: CAPSGIGRRTAW*PPGPGRRRSAR
Trigger: CCGCGCTGAGCGCCGCCTGCCTGGGCCCGGAGGTCACCACGCAGTACGGCGGCCAATACCGGACGGTGCACA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000447436.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
ENST00000463995.5
ENST00000491799.5
CDS CCA 72 bp GAGGCGTTGGATCTCGGAGGAGAGGGGGCGGCCCTGTaGAAGCGGAACCCGGGAGCCCGGCTTCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: EALDLGGEGAAL*KRNPGARLRGG
Trigger: CCCTCCCCGAAGCCGGGCTCCCGGGTTCCGCTTCCACAGGGCCGCCCCCTCTCCTCCGAGATCCAACGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449966.5
CDS TCA 72 bp GCAGGGACCACGGGGACCGCGGGCCGAGCCCTCACCTaGCGTTCCATAGTCTCCTCTCTGCCGCCGGGGCGA +
Preference number: 6 (lower is better)
Translates to: AGTTGTAGRALT*RSIVSSLPPGR
Trigger: TCGCCCCGGCGGCAGAGAGGAGACTATGGAACGTCAGGTGAGGGCTCGGCCCGCGGTCCCCGTGGTCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491799.5
CDS CCA 72 bp TCCCTCTGGGTCCACTCAGTGTGCACCGTCCGGTATTaGCCGCCGTACTGCGTGGTGACCTCCGGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SLWVHSVCTVRY*PPYCVVTSGPR
Trigger: CCTGGGCCCGGAGGTCACCACGCAGTACGGCGGCCAATACCGGACGGTGCACACTGAGTGGACCCAGAGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
CDS CAA 72 bp GTCCCTCTGGGTCCACTCAGTGTGCACCGTCCGGTATaGGCCGCCGTACTGCGTGGTGACCTCCGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: VPLGPLSVHRPV*AAVLRGDLRAQ
Trigger: CTGGGCCCGGAGGTCACCACGCAGTACGGCGGCCAATACCGGACGGTGCACACTGAGTGGACCCAGAGGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
CDS CCA 72 bp CCCACATGTTGGAGCTCCAGTCCCCCGCTGCCTGGTTaGCTTGCTCACCAGCCCTGCCCTTACCCCCATCCC +
Preference number: 6 (lower is better)
Translates to: PTCWSSSPPLPG*LAHQPCPYPHP
Trigger: GGGATGGGGGTAAGGGCAGGGCTGGTGAGCAAGCCAACCAGGCAGCGGGGGACTGGAGCTCCAACATGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS GCA 72 bp CACAGTATGGGAAGGGAGCACACTGAGCCCCAGGGCTaGCCTGCCGGGCCTTCGTGGATTGACCACGAGCAC +
Preference number: 6 (lower is better)
Translates to: HSMGREHTEPQG*PAGPSWIDHEH
Trigger: GTGCTCGTGGTCAATCCACGAAGGCCCGGCAGGGCAGCCCTGGGGCTCAGTGTGCTCCCTTCCCATACTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463995.5
ENST00000483715.5
CDS GCA 72 bp ATCACTGCCCCACATGTTGGAGCTCCAGTCCCCCGCTaGCTGGTTGGCTTGCTCACCAGCCCTGCCCTTACC +
Preference number: 6 (lower is better)
Translates to: ITAPHVGAPVPR*LVGLLTSPALT
Trigger: GGTAAGGGCAGGGCTGGTGAGCAAGCCAACCAGGCAGCGGGGGACTGGAGCTCCAACATGTGGGGCAGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS GCA 72 bp GTTGGAGGGTCCTCCTGTGCTCACCTGCCCACCAGCTaGCAGGGCCTTCATGCTGCACTCACCGAACAGGCA +
Preference number: 6 (lower is better)
Translates to: VGGSSCAHLPTS*QGLHAALTEQA
Trigger: TGCCTGTTCGGTGAGTGCAGCATGAAGGCCCTGGCAGCTGGTGGGCAGGTGAGCACAGGAGGACCCTCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480772.1
CDS CAA 90 bp GTCAGTGGTGCTGAGTGGCTGAGAATGCCATCACTGCCCCACATGTaGGAGCTCCAGTCCCCCGCTGCCTGGTTGGCTTGCTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: VSGAEWLRMPSLPHM*ELQSPAAWLACSPA
Trigger: GGCTGGTGAGCAAGCCAACCAGGCAGCGGGGGACTGGAGCTCCAACATGTGGGGCAGTGATGGCATTCTCAGCCACTCAGCACCACTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS TCA 72 bp GCCTCCAGCCTTGCGCAGCACAGCTTTCATGGTGCCTaGAGGAGACTCTCTGCTCAGCAGTCGAGGGGCGAG +
Preference number: 6 (lower is better)
Translates to: ASSLAQHSFHGA*RRLSAQQSRGE
Trigger: CTCGCCCCTCGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449966.5
CDS GCA 72 bp CCGTGCCTCCAGCCTTGCGCAGCACAGCTTTCATGGTaGCTGAAGGAGACTCTCTGCTCAGCAGTCGAGGGG +
Preference number: 6 (lower is better)
Translates to: PCLQPCAAQLSW*LKETLCSAVEG
Trigger: CCCCTCGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449966.5
CDS GCA 72 bp GGCTTTTCCTGGGCCCTCAGGTGGCAGAGCTGCCTCTaGCTGAGACAGGCACCCAAGGTTTGCAGAGCGAGA +
Preference number: 6 (lower is better)
Translates to: GFSWALRWQSCL*LRQAPKVCRAR
Trigger: TCTCGCTCTGCAAACCTTGGGTGCCTGTCTCAGGCAGAGGCAGCTCTGCCACCTGAGGGCCCAGGAAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS GCA 72 bp GGCTCGGCCTCCTCCAGGGACACCCACAACACTGACTaGTCCTTCCCTGCAGAAGGCAGGAACCCAACTTTC +
Preference number: 6 (lower is better)
Translates to: GSASSRDTHNTD*SFPAEGRNPTF
Trigger: GAAAGTTGGGTTCCTGCCTTCTGCAGGGAAGGAGCAGTCAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000469362.6
CDS GCA 72 bp CCGTGCCTCCAGCCTTGCGCAGCACAGCTTTCATGGTaGCTGAAGGAGACTCTCTGCTCAGCAGTCAGTGTG +
Preference number: 6 (lower is better)
Translates to: PCLQPCAAQLSW*LKETLCSAVSV
Trigger: CACACTGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447436.5
ENST00000463995.5
ENST00000491799.5
CDS GCA 72 bp ACACCAGGTATTGGCGGCAGAATCGAATGTTCTCCATaGGTTCCAGGTCCCTCTGGGTCCACTCGAGGGGCG +
Preference number: 6 (lower is better)
Translates to: TPGIGGRIECSP*VPGPSGSTRGA
Trigger: CGCCCCTCGAGTGGACCCAGAGGGACCTGGAACGCATGGAGAACATTCGATTCTGCCGCCAATACCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS CAA 90 bp TGCCCTGCCGGGCCTTCGTGGATTGACCACGAGCACCTTGATGGCTaGGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGCACT +
Preference number: 6 (lower is better)
Translates to: CPAGPSWIDHEHLDG*VWLLQPGYLIIAGT
Trigger: AGTGCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAGGTGCTCGTGGTCAATCCACGAAGGCCCGGCAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463995.5
ENST00000483715.5
CDS TCA 72 bp CTCCACACTGTTGCCTGCAGGTCCTGCAAACACCACTaGGTCCCCGTCATGGAACACCAGGTATTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: LHTVACRSCKHH*VPVMEHQVLAA
Trigger: TGCCGCCAATACCTGGTGTTCCATGACGGGGACTCAGTGGTGTTTGCAGGACCTGCAGGCAACAGTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
ENST00000483715.5
CDS TCA 72 bp CCGTTGAGCTCCTCAAGAGCGAAGTGTGGCACAGGCTaGTCAGCTCATGCAGAATGGCAGGGCTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: PLSSSRAKCGTG*SAHAEWQGFSC
Trigger: GCAGCTGAAGCCCTGCCATTCTGCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAGGAGCTCAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000480772.1
CDS TCA 72 bp GCCTCCAGCCTTGCGCAGCACAGCTTTCATGGTGCCTaGAGGAGACTCTCTGCTCAGCAGTCTGACGTTCCA +
Preference number: 6 (lower is better)
Translates to: ASSLAQHSFHGA*RRLSAQQSDVP
Trigger: TGGAACGTCAGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442186.5
ENST00000446089.5
CDS TCA 72 bp TGCTCCCTACTGGGCACACCTCTTAGGAGAGATTCTTaGGGCTCTGGCCCCACACCAGCTTCTGGAGCACCT +
Preference number: 6 (lower is better)
Translates to: CSLLGTPLRRDS*GSGPTPASGAP
Trigger: AGGTGCTCCAGAAGCTGGTGTGGGGCCAGAGCCTCAAGAATCTCTCCTAAGAGGTGTGCCCAGTAGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS GCA 72 bp CAACATTTAAGGTTGGAGGGTCCTCCTGTGCTCACCTaGCCACCAGCTGCCAGGGCCTTCATGCTGCACTCA +
Preference number: 6 (lower is better)
Translates to: QHLRLEGPPVLT*PPAARAFMLHS
Trigger: TGAGTGCAGCATGAAGGCCCTGGCAGCTGGTGGGCAGGTGAGCACAGGAGGACCCTCCAACCTTAAATGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480772.1
CDS TCA 72 bp TCCAGTGCTTATCAGGCCATGTCACCAGAAACTGAATaGGCTCCCAAGGGGGCAAGAACCTGGCTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: SSAYQAMSPETE*APKGARTWLLA
Trigger: GGCCAGCAGCCAGGTTCTTGCCCCCTTGGGAGCTCATTCAGTTTCTGGTGACATGGCCTGATAAGCACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS GCA 72 bp CTCAAGAGCGAAGTGTGGCACAGGCTGATCAGCTCATaGAGAATGGCAGGGCTTCAGCTGCCCAAGTGTGTG +
Preference number: 6 (lower is better)
Translates to: LKSEVWHRLISS*RMAGLQLPKCV
Trigger: CACACACTTGGGCAGCTGAAGCCCTGCCATTCTGCATGAGCTGATCAGCCTGTGCCACACTTCGCTCTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000480772.1
CDS CCA 72 bp ACTCCACCTCCACCTCTGATAATGCGTGGGTGCTTTTaGGATAGAGCAGGAGCCGAACAGGCACATTCCGGG +
Preference number: 6 (lower is better)
Translates to: TPPPPLIMRGCF*DRAGAEQAHSG
Trigger: CCCGGAATGTGCCTGTTCGGCTCCTGCTCTATCCCAAAAGCACCCACGCATTATCAGAGGTGGAGGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000438011.5
CDS CCA 72 bp CAGAGACTCTACTCTCTGCAACTCCCCAGGCCACCATaGGCTCTAGTCCAGGCTGAGTTTGGAGCAAGCTTC +
Preference number: 6 (lower is better)
Translates to: QRLYSLQLPRPP*ALVQAEFGASF
Trigger: GAAGCTTGCTCCAAACTCAGCCTGGACTAGAGCCCATGGTGGCCTGGGGAGTTGCAGAGAGTAGAGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS CAA 72 bp CTAAAGGGCAGTAGAGCAGGGAAGCTAGTCTGTTGGTaGGGTAAGGGTCTGCACAGACAGGGGCCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: LKGSRAGKLVCW*GKGLHRQGPWG
Trigger: TCCCCAAGGCCCCTGTCTGTGCAGACCCTTACCCAACCAACAGACTAGCTTCCCTGCTCTACTGCCCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS GCA 72 bp TTCTTCTCTGCCACATACAACAAGTGTGTCTCCGAGTaGGACCAGGACAGGCAGCCAAAGCAGTCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: FFSATYNKCVSE*DQDRQPKQSGC
Trigger: GCACCCAGACTGCTTTGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGTATGTGGCAGAGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463616.1
CDS GCA 72 bp CAGAGCTGCCTCTGCCTGAGACAGGCACCCAAGGTTTaGAGAGCGAGAAGGATGAGTCTGGCAGATCTTGAT +
Preference number: 6 (lower is better)
Translates to: QSCLCLRQAPKV*RARRMSLADLD
Trigger: ATCAAGATCTGCCAGACTCATCCTTCTCGCTCTGCAAACCTTGGGTGCCTGTCTCAGGCAGAGGCAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS CCA 72 bp CCTGCAGGTCCTGCAAACACCACTGAGTCCCCGTCATaGAACACCAGGTATTGGCGGCAGAATCGAATGTTC +
Preference number: 6 (lower is better)
Translates to: PAGPANTTESPS*NTRYWRQNRMF
Trigger: GAACATTCGATTCTGCCGCCAATACCTGGTGTTCCATGACGGGGACTCAGTGGTGTTTGCAGGACCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000457042.1
ENST00000462439.5
ENST00000463616.1
ENST00000483715.5
CDS CCA 72 bp AGGCTGGGTGTGGAAAACTGTGCCACCATGAGGTCCTaGTCAATTGTGAGCAACTTCCAGCTCCCACCTGAC +
Preference number: 6 (lower is better)
Translates to: RLGVENCATMRS*SIVSNFQLPPD
Trigger: GTCAGGTGGGAGCTGGAAGTTGCTCACAATTGACCAGGACCTCATGGTGGCACAGTTTTCCACACCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000438011.5
CDS CCA 72 bp AGGCTGGGTGTGGAAAACTGTGCCACCATGAGGTCCTaGTCAATTGTGAGCAACTTCCAGCTCCCACTTGGG +
Preference number: 6 (lower is better)
Translates to: RLGVENCATMRS*SIVSNFQLPLG
Trigger: CCCAAGTGGGAGCTGGAAGTTGCTCACAATTGACCAGGACCTCATGGTGGCACAGTTTTCCACACCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469362.6
CDS CCA 72 bp TCGTGGATTGACCACGAGCACCTTGATGGCTTGGTCTaGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGC +
Preference number: 6 (lower is better)
Translates to: SWIDHEHLDGLV*LLQPGYLIIAG
Trigger: GCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAGGTGCTCGTGGTCAATCCACGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463995.5
ENST00000483715.5
CDS CCA 72 bp GGCCTTCGTGGATTGACCACGAGCACCTTGATGGCTTaGTCTGGCTTCTTCAGCCTGGCTATCTCATCATCG +
Preference number: 6 (lower is better)
Translates to: GLRGLTTSTLMA*SGFFSLAISSS
Trigger: CGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAGGTGCTCGTGGTCAATCCACGAAGGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463995.5
ENST00000483715.5
CDS TCA 72 bp AGCTTCCAGTGCTTATCAGGCCATGTCACCAGAAACTaGATGAGCTCCCAAGGGGGCAAGAACCTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: SFQCLSGHVTRN*MSSQGGKNLAA
Trigger: AGCAGCCAGGTTCTTGCCCCCTTGGGAGCTCATTCAGTTTCTGGTGACATGGCCTGATAAGCACTGGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS GCA 72 bp TGTCTGACTCCACCTCCACCTCTGATAATGCGTGGGTaGTTTTGGGATAGAGCAGGAGCCGAACAGGCACAT +
Preference number: 6 (lower is better)
Translates to: CLTPPPPLIMRG*FWDRAGAEQAH
Trigger: ATGTGCCTGTTCGGCTCCTGCTCTATCCCAAAAGCACCCACGCATTATCAGAGGTGGAGGTGGAGTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296456.10
ENST00000438011.5
CDS CCA 72 bp TGTTGGTTGGGTAAGGGTCTGCACAGACAGGGGCCTTaGGGACCTGTTAGTAAAGGCTGTGGAACAGTCAGT +
Preference number: 6 (lower is better)
Translates to: CWLGKGLHRQGP*GPVSKGCGTVS
Trigger: ACTGACTGTTCCACAGCCTTTACTAACAGGTCCCCAAGGCCCCTGTCTGTGCAGACCCTTACCCAACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS CAA 72 bp ATTCATAAAAGGCTTGCATTGCGGACGGCTGTGGCCTaGCCCACAAGCTTCCTCCCTCAAACTTACTCCCCC +
Preference number: 6 (lower is better)
Translates to: IHKRLALRTAVA*PTSFLPQTYSP
Trigger: GGGGGAGTAAGTTTGAGGGAGGAAGCTTGTGGGCAAGGCCACAGCCGTCCGCAATGCAAGCCTTTTATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS CAA 72 bp TCTAGGCACATGGTGAGCATTCATAAAAGGCTTGCATaGCGGACGGCTGTGGCCTTGCCCACAAGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SRHMVSIHKRLA*RTAVALPTSFL
Trigger: GAGGAAGCTTGTGGGCAAGGCCACAGCCGTCCGCAATGCAAGCCTTTTATGAATGCTCACCATGTGCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS TCA 72 bp CCCATCCTCATAAACAGGCCCATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAGCTTCCGGTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: PILINRPMFLQR*QVEALELPVLL
Trigger: GAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACATGGGCCTGTTTATGAGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447541.5
CDS CCA 72 bp GTTAGTAAAGGCTGTGGAACAGTCAGTGGTGCTGAGTaGCTGAGAATGCCATCACTGCCCCACATGTTGGAG +
Preference number: 6 (lower is better)
Translates to: VSKGCGTVSGAE*LRMPSLPHMLE
Trigger: CTCCAACATGTGGGGCAGTGATGGCATTCTCAGCCACTCAGCACCACTGACTGTTCCACAGCCTTTACTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482301.1
CDS CCA 72 bp ATGGTGCCTGAAGGAGACTCTCTGCTCAGCAGTCTGTaGACATGGGGTAGCACAGGTCAGGATTATCTTGCA +
Preference number: 6 (lower is better)
Translates to: MVPEGDSLLSSL*TWGSTGQDYLA
Trigger: TGCAAGATAATCCTGACCTGTGCTACCCCATGTCCACAGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS TCA 72 bp ACCATCCTCATAAACAGGCCCATGTTTCTCCAGCGCTaGCAGGTTGAAGCTCTTGAGCTTCCGGTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: TILINRPMFLQR*QVEALELPVLL
Trigger: GAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAACATGGGCCTGTTTATGAGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463616.1
CDS GCA 72 bp AGCACAGGTCAGGATTATCTTGCAATAACCCCTTCCTaGTCCCTACTGGGCACACCTCTTAGGAGAGATTCT +
Preference number: 6 (lower is better)
Translates to: STGQDYLAITPS*SLLGTPLRRDS
Trigger: AGAATCTCTCCTAAGAGGTGTGCCCAGTAGGGAGCAGGAAGGGGTTATTGCAAGATAATCCTGACCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483715.5
CDS CCA 72 bp ATAAAACACAAACTGATCCCCCTTGATGGCTTGGTCTaGCTTCTTCAGCCTGGCTATCTCATCATCGCTGGC +
Preference number: 6 (lower is better)
Translates to: IKHKLIPLDGLV*LLQPGYLIIAG
Trigger: GCCAGCGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAGGGGGATCAGTTTGTGTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296456.10
ENST00000438011.5
ENST00000442186.5
ENST00000449966.5
ENST00000462439.5
ENST00000491799.5