RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000115266

Ensembl transcript IDs: ENST00000233607.6, ENST00000238483.5, ENST00000535453.5, ENST00000587149.6, ENST00000587869.5, ENST00000590469.6, ENST00000590877.5, ENST00000593146.1

Found 1889 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCGTTTCCTCCTGGACCTCCGCGGCAC +
Preference number: 1 (lower is better)
Translates to: RAGPGRPCQRSTVGT*GLAAAPFPPGPPRH
Trigger: GTGCCGCGGAGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp AGCCGGCCCGGCGTCTGCACCAGGGTCCCATCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGGGGATCC +
Preference number: 1 (lower is better)
Translates to: SRPGVCTRVPSYAAR*LPVSRQGVRQAGGS
Trigger: GGATCCCCCTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp GGGAGAGGCCAGCGCGGGCTCCAGGTCCCAGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCTCCTTTCCATTGGCCTCGCCCGCCG +
Preference number: 1 (lower is better)
Translates to: GRGQRGLQVPGPRAH*RDSPQSPFHWPRPP
Trigger: CGGCGGGCGAGGCCAATGGAAAGGAGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCCTGGGACCTGGAGCCCGCGCTGGCCTCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCCAG +
Preference number: 1 (lower is better)
Translates to: EALGRPMGDVYSAGP*GSQTAPQGRERTFQ
Trigger: CTGGAACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GGGCCTCGGGCTCACTGCCGGGACTCCCCTCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATACTGACTCCAGC +
Preference number: 1 (lower is better)
Translates to: GPRAHCRDSPQSPFH*PRPPRLRRADTDSS
Trigger: GCTGGAGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GGCGCGCGCCATCAGGGCTGGACCGGGGCAACAGATGGGGCCGGGTaGGGTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCAC +
Preference number: 1 (lower is better)
Translates to: GARHQGWTGATDGAG*GNAVGAREDHAGGH
Trigger: GTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GTCAAGCAACGGCTTCCGACAGGGGAAGGGCCGCGCGCTCAGGGCTaGGCCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTTGAGG +
Preference number: 1 (lower is better)
Translates to: VKQRLPTGEGPRAQG*ARTPLPALHGRDLR
Trigger: CCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCCCTGTCGGAAGCCGTTGCTTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp TCCTTTCCATTGGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGGTCGCCCCAGCTGGTAGCCAGCATC +
Preference number: 1 (lower is better)
Translates to: SFPLASPAAAAPGRY*LQRPLGSPQLVASI
Trigger: GATGCTGGCTACCAGCTGGGGCGACCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CTCCACGGTCGGGACTTGAGGCCTAGCGGCCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGAG +
Preference number: 1 (lower is better)
Translates to: LHGRDLRPSGRPVSS*TSAAQRQGLPVRRE
Trigger: CTCGCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GGGGGTGGGAGGCGGGGCTGGCAGCCATGTTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGT +
Preference number: 1 (lower is better)
Translates to: GGGRRGWQPCCAPCC*ARRHGQEPARPKFC
Trigger: ACAGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCCCCGCCTCCCACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp GCATCTCCTCTGGGATGGGGTCCAAATGTCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTACGCAGCCCGCTGCCTTCCCGTCTCC +
Preference number: 1 (lower is better)
Translates to: ASPLGWGPNVSRPGV*TRVPSYAARCLPVS
Trigger: GGAGACGGGAAGGCAGCGGGCTGCGTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CGGTGGGCACGGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCAGGACACCTCC +
Preference number: 1 (lower is better)
Translates to: RWARRPEFSTHVWSC*GPVAVTVHQPQDTS
Trigger: GGAGGTGTCCTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCGTGCCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GGACCATGCCGGTGGGCACGGCGCCCCGAGTTCAGCACCCACGTGTaGTCATGTTGGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCAG +
Preference number: 1 (lower is better)
Translates to: GPCRWARRPEFSTHV*SCWGPVAVTVHQPQ
Trigger: CTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCGTGCCCACCGGCATGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp CTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCC +
Preference number: 1 (lower is better)
Translates to: LGKASRAGASQTQVL*ASRRLPIIAATTLP
Trigger: GGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTTGGGGGCCAGTaGCGGTCACTGTCCATCAGCCTCAGGACACCTCCACCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: GAPSSAPTCGHVGGQ*RSLSISLRTPPPSL
Trigger: CAGGGAGGGTGGAGGTGTCCTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GGGGCCGCGGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAG +
Preference number: 1 (lower is better)
Translates to: GAAVGGRPCSGRTLS*LSRDRGLPVPFWRQ
Trigger: CTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACCGCGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp AGGCAGGGGCCGCGGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACCGCGGACTGCCTGTCCCCTTCTGGA +
Preference number: 1 (lower is better)
Translates to: RQGPRWEGGLAVGVP*VDCPETADCLSPSG
Trigger: TCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACCGCGGCCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp TGTCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGTGAGC +
Preference number: 1 (lower is better)
Translates to: CHQRPGGWLRHFPTL*QLGAQRAGASVRVS
Trigger: GCTCACCCTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCC +
Preference number: 1 (lower is better)
Translates to: LRPQTLSSLGLALEH*GADEDPLSPWCREA
Trigger: GGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp TTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCTCCCGCCTTGTCCCAGAGCCTCGGG +
Preference number: 1 (lower is better)
Translates to: FHLIWHQILSSPAFT*RKAPEPPALSQSLG
Trigger: CCCGAGGCTCTGGGACAAGGCGGGAGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp ACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: TIPAKPSLANYRRLQ*LQASPLRAAKAPSW
Trigger: CCAGCTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CACCCAACCCTCAAACCCTGCTTCGTTCCTCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCTTCAGCCTGGGCAGATCCGTGGGTG +
Preference number: 1 (lower is better)
Translates to: HPTLKPCFVPPGEGT*GIERVPSAWADPWV
Trigger: CACCCACGGATCTGCCCAGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp ATGCTGGGGATGGGACGGGAGGGATGGTGTCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCCATCCACCCAACCCTCAAACCCTGC +
Preference number: 1 (lower is better)
Translates to: MLGMGREGWCHPWWG*GFLLSSIHPTLKPC
Trigger: GCAGGGTTTGAGGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATGACACCATCCCTCCCGTCCCATCCCCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CGAGGTCCTAGGAGGGAGCATTGGGCACCTCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTATGGACGTCCTGTCTGGAGCTCCTTG +
Preference number: 1 (lower is better)
Translates to: RGPRREHWAPPAPAG*HTSVTYGRPVWSSL
Trigger: CAAGGAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGGACCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CAACCTGACAGCCTTGCCTGGCTGCGAGGTCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCTGGGTGGCACACCTCGGTGACTTAT +
Preference number: 1 (lower is better)
Translates to: QPDSLAWLRGPRREH*APPAPAGWHTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp ACACGTCCGTTTAACACTGCAGAGACCCGGTACAGAAACGTGGGGTaGCGGCTAGGGGAATCAGACAGACCAGGCGCGCGCCATCAGGGC +
Preference number: 1 (lower is better)
Translates to: TRPFNTAETRYRNVG*RLGESDRPGARHQG
Trigger: GCCCTGATGGCGCGCGCCTGGTCTGTCTGATTCCCCTAGCCGCCACCCCACGTTTCTGTACCGGGTCTCTGCAGTGTTAAACGGACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GACGGGAGGGATGGTGTCATCCGTGGTGGGGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCCTCAAACCCTGCTTCGTTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: DGRDGVIRGGAGVSF*APSTQPSNPASFLL
Trigger: CAGGAGGAACGAAGCAGGGTTTGAGGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATGACACCATCCCTCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GGAATTGAAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTaGCCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGC +
Preference number: 1 (lower is better)
Translates to: GIEKGQDEQRCGPGH*PRPHVMVSVTCRLR
Trigger: GCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTTCAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp GGCTGGGGTTTCCTTCTGAGCTCCATCCACCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAAGGCACGTGGGGCATTGAGCGTGTG +
Preference number: 1 (lower is better)
Translates to: GWGFLLSSIHPTLKP*FVPPGEGTWGIERV
Trigger: CACACGCTCAATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp GCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCACCAGCGACCTGGTGGCTGGCTTCG +
Preference number: 1 (lower is better)
Translates to: AQRLTYVEGNAAPPS*ITLALSPATWWLAS
Trigger: CGAAGCCAGCCACCAGGTCGCTGGTGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp AGGCAGCCGAGCCCCTCAGGCCCTTCTATAAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGAAGGCC +
Preference number: 1 (lower is better)
Translates to: RQPSPSGPSISFHLI*HQILSSPAFTCRKA
Trigger: GGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTTATAGAAGGGCCTGAGGGGCTCGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp TTCTATAAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGCCCCCGAACCTCCCGCCTTGTCCCA +
Preference number: 1 (lower is better)
Translates to: FYKLSPHLAPNTLQP*VHLPEGPRTSRLVP
Trigger: TGGGACAAGGCGGGAGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTTATAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp CCCACCCGCACTCCCACAGCTGGGGCTGAGAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACA +
Preference number: 1 (lower is better)
Translates to: PTRTPTAGAENENNP*KALISELPAAAVIT
Trigger: TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATTCTCAGCCCCAGCTGTGGGAGTGCGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GCAATGCAAGAGCTCAGTTTATTAAATGTGTGCGAGTCGGACAGCTaGCGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTAGGG +
Preference number: 1 (lower is better)
Translates to: AMQELSLLNVCESDS*RCRPYAGQMALHLG
Trigger: CCCTAAATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGCACACATTTAATAAACTGAGCTCTTGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp CCGACAGGGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGGGACTTGAGGCCTAGCGGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: PTGEGPRAQGWARTP*PALHGRDLRPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCCCTGTCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCGCGCGCTCAGGGCTaGGCCAGGACGCCCTTGCCA +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPRAQG*ARTPLP
Trigger: TGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTAC +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPSRPGV*TRVPSY
Trigger: GTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp CAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCCGTTTCCTCCTGGACCTCCGCGGCA +
Preference number: 2 (lower is better)
Translates to: QGWARTPLPALHGRD*RPSGRPVSSWTSAA
Trigger: TGCCGCGGAGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 2 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVGLRVP*TPSGRG
Trigger: GCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVTCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWGLRVP*TPSGRG
Trigger: GCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 2 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp CCGGTGGGCACGGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTaGGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCAGGACACCTC +
Preference number: 2 (lower is better)
Translates to: PVGTAPRVQHPRVVM*GASGGHCPSASGHL
Trigger: GAGGTGTCCTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCGTGCCCACCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCAGAGACCGCGGACTaGCTGTCCCCTTCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGPETAD*LSPSGD
Trigger: GTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRPVSS*TSAAQR
Trigger: CCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGALSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRLKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCTGGGCGGTGAGGTGTaGCTGTGGCCCCCACGGCAG +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWLGGEV*LWPPRQ
Trigger: CTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGGCAGATCCGTGGGTaGAGGCAGCGCCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGQIRG*RQRLLE
Trigger: CTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGCSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCCCAGCGCTGTCCCTaGGAAGCAGCGGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPQRCP*EAADPD
Trigger: GTCTGGGTCCGCTGCTTCGCAGGGACAGCGCTGGGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGGCACCTCCAGCACCTaGTGGGTGGCACACCTCGGT +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRGTSST*WVAHLG
Trigger: ACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGSPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGRVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTGGCCTTGCCCATGCTaGGGATGGGACGGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPWPCPC*GWDGRD
Trigger: ATCCCTCCCGTCCCATCCCCAGCATGGGCAAGGCCA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCACCAGCGACCTGGTaGCTGGCTTCGCCATTTCCC +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGSPATW*LASPFP
Trigger: GGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp CTGTCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: LSPATWWLASPFPYP*AIRGAAGRGECEGE
Trigger: CTCACCCTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGCAGATCCGTGGGTaGAGGCAGCGCCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGQIRG*RQRLLE
Trigger: CTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVAGVSF*APSTQP
Trigger: GGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGACSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAQTQVL*ASRRLP
Trigger: GGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGCACCTCCAGCACCTaGTGGGTGGCACACCTCGGT +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWGTSST*WVAHLG
Trigger: ACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPAAPPS*ITLALS
Trigger: TGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCACCCCCACCCTTTTaGGCTCCGCCGGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPPPPF*APPERL
Trigger: CAAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCTGCTTCGTTCCTCCTaGAGAAGGCACGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGLLRSS*RRHVGH
Trigger: ATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAHPWWG*GFLLSS
Trigger: GGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 2 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGETSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 2 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGACAGAGGCAGGGAGCTaGGAGGGCGCCGCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALTEAGS*EGAAQR
Trigger: TCTCTGGGCGGCGCCCTCCCAGCTCCCTGCCTCTGT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp GGGTGGCACACCTCGGTGACTTATGGACGTCCTGTCTGGAGCTCCTaGTCCTGCAGGGTGTGGGCCCGGAGCATGGGGTGCAGCGTGACA +
Preference number: 2 (lower is better)
Translates to: GWHTSVTYGRPVWSS*SCRVWARSMGCSVT
Trigger: TGTCACGCTGCACCCCATGCTCCGGGCCCACACCCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTGTGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp AGGGGCCGCGGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTGAGTaGATTGTCCAGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACA +
Preference number: 2 (lower is better)
Translates to: RGRGGREALQWAYLE*IVQRPRTACPLLET
Trigger: TGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACCGCGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRSTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEYRRLQ*LQASPL
Trigger: CAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGATPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGA +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQGRTLS*LSRDRG
Trigger: TCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPNTLQP*VHLPEG
Trigger: GCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRAAPPS*ITLALS
Trigger: TGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: LISELPAAAVITGFAPARRPVSS*TSAAQR
Trigger: CCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCTGCTTCGTTCCTCCTaGAGAAGGCACGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPLLRSS*RRHVGH
Trigger: ATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTTCTGCCAGAAAGGCTaGCCTTGCCCATGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAFCQKG*PCPCWG
Trigger: TCCCCAGCATGGGCAAGGCCAGCCTTTCTGGCAGAA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSTSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCT +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPRREH*APPAPA
Trigger: AGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSCSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWSPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCCCAGCGCTGTCCCTaGGAAGCAGCGGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPQRCP*EAADPD
Trigger: GTCTGGGTCCGCTGCTTCGCAGGGACAGCGCTGGGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCGAATTACCGGCGGCTaGAGTGATTACAGGCTTCGC +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGRITGG*SDYRLR
Trigger: GCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGAGGACAGCTCCTTCTaGCAGAAAGGCTGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEEDSSF*QKGWPC
Trigger: GCAAGGCCAGCCTTTCTGGCAGAAGGAGCTGTCCTC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPGEGT*GIERVP
Trigger: AGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPLKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGG +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAHFPTL*QLGAQR
Trigger: CCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTGGAGACAGCTGGACTaGGCGGTGAGGTGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWWRQLD*AVRCGC
Trigger: ACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCA...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALTAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRAWGAA*HAFREA
Trigger: TGCTTCTCTGAATGCATGTCACGCTGCACCCCATGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGTGGCACACCTCGGTaGCTTATGGACGTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGGTPR*LMDVLS
Trigger: AGACAGGACGTCCATAAGTCACCGAGGTGTGCCACC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPSPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGAATTACCGGCGGCTaGAGTGATTACAGGCTTCGC +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRITGG*SDYRLR
Trigger: GCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTAC +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYISRPGV*TRVPSY
Trigger: GTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGATTTTCCCCGCTCTCTaGTCAGCCATCCATGACCCC +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRIFPAL*SAIHDP
Trigger: GGGGTCATGGATGGCTGAGCAGAGAGCGGGGAAAAT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCATATGTGGAAGGCAATaGCGCACCACCTTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGICGRQ*RTTFLH
Trigger: ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATAT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATGGCCTTGCCCATGCTaGGGATGGGACGGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAWPCPC*GWDGRD
Trigger: ATCCCTCCCGTCCCATCCCCAGCATGGGCAAGGCCA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTTCTGCCAGAAAGGCTaGCCTTGCCCATGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWFCQKG*PCPCWG
Trigger: TCCCCAGCATGGGCAAGGCCAGCCTTTCTGGCAGAA...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTTCTGCCAGAAAGGCTaGCCTTGCCCATGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEFCQKG*PCPCWG
Trigger: TCCCCAGCATGGGCAAGGCCAGCCTTTCTGGCAGAA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPLSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTAT +
Preference number: 2 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPAPAG*HTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQTSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHLKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPTPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYICRTRR*PSHGDP
Trigger: CGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCACCTCCAGCACCTaGTGGGTGGCACACCTCGGT +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRGTSST*WVAHLG
Trigger: ACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCCACCCCCACCCTTTTaGGCTCCGCCGGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPPPPPF*APPERL
Trigger: CAAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCTCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPSQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQHPWWG*GFLLSS
Trigger: GGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGATGGTGTCATCCGTaGTGGGGCTGGGGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGWCHP*WGWGFL
Trigger: AAGGAAACCCCAGCCCCACCACGGATGACACCATCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGCCCATGCTGGGGATaGGACGGGAGGGATGGTGTC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPCPCWG*DGRDGV
Trigger: GACACCATCCCTCCCGTCCCATCCCCAGCATGGGCA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACC +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALAVGVP*VDCPET
Trigger: GGTCTCTGGACAATCAACTCAAGGTACGCCCACTGC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGATATGTGGAAGGCAATaGCGCACCACCTTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRICGRQ*RTTFLH
Trigger: ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATAT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAWCHPW*GWGFLL
Trigger: CAGAAGGAAACCCCAGCCCCACCACGGATGACACCA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACCAGCACCTGCTGGGTaGCACACCTCGGTGACTTAT +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAPAPAG*HTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGAGACTTACATATGTaGAAGGCAATGCCGCACCAC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVRDLHM*KAMPHH
Trigger: GTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 2 (lower is better)
Translates to: NNPCKALISELPAAAVITGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRTAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACATACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 2 (lower is better)
Translates to: NNPCKALISELPAAAVITYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPWCHPW*GWGFLL
Trigger: CAGAAGGAAACCCCAGCCCCACCACGGATGACACCA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAHLGDL*TSCLEL
Trigger: GAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCAGCGACCTGGTGGCTaGCTTCGCCATTTCCCTACC +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIQRPGG*LRHFPT
Trigger: GGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCGCTTTATGCATCATaGACCAGAAGGGAATTGAAA +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGALYAS*TRRELK
Trigger: TTTCAATTCCCTTCTGGTTCATGATGCATAAAGCGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCC +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPAGVSF*APSTQP
Trigger: GGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSFHLI*HQILSS
Trigger: GCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPHLGDL*TSCLEL
Trigger: GAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGG +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPHFPTL*QLGAQR
Trigger: CCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYILSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTTCAGCACCCACGTGTaGTCATGTTGGGGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIFSTHV*SCWGPV
Trigger: CACTGGCCCCCAACATGACCACACGTGGGTGCTGAA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPNENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGANENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTCCCCGCCCCAGCTGTaGTGTTTCTGGAGTTCTAGG +
Preference number: 2 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPSPPQL*CFWSSR
Trigger: CCTAGAACTCCAGAAACAGCACAGCTGGGGCGGGGA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTASTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFRPVSS*TSAAQR
Trigger: CCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGAAGGCAGCGCCTGCTaGAGCTTTTCTGCAGAAAAG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIEGSAC*SFSAEK
Trigger: CTTTTCTGCAGAAAAGCTCCAGCAGGCGCTGCCTTC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTTCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAA +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSYAAR*LPVSRQ
Trigger: TTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGA...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTATPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTALALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGCGCGCCATCAGGGCTaGACCGGGGCAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAARHQG*TGATDG
Trigger: CCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCC +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFAGVSF*APSTQP
Trigger: GGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCT +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTASPAFT*RKAPEP
Trigger: AGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRSPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGTGGGAGGGAGGCCTTaGAGTGGGCGTACCTTGAGT +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFVGGRP*SGRTLS
Trigger: ACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCT +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRPRREH*APPAPA
Trigger: AGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCAGCGACCTGGTGGCTaGCTTCGCCATTTCCCTACC +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRQRPGG*LRHFPT
Trigger: GGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATGCGGTCCTGGGCACTaGCCACGCCCACATGTGATG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTACGPGH*PRPHVM
Trigger: CATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGGTGGCACACCTCGGTaGCTTATGGACGTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFGGTPR*LMDVLS
Trigger: AGACAGGACGTCCATAAGTCACCGAGGTGTGCCACC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCTGCTGGAGCTTTTCTaGAGAAAAGAGGTCGTCGGC +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFLLELF*RKEVVG
Trigger: GCCGACGACCTCTTTTCTGCAGAAAAGCTCCAGCAG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCCATGTTGCGCACCTTaGTGCTGGGCAAGGCGTCAC +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTPCCAP*CWARRH
Trigger: GTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGTGGGAGGGAGGCCTTaGAGTGGGCGTACCTTGAGT +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTVGGRP*SGRTLS
Trigger: ACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGGGTGCAGCGTGACATaGATTCAGAGAAGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAGCSVT*IQRSSS
Trigger: ACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTLSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTAWGAA*HAFREA
Trigger: TGCTTCTCTGAATGCATGTCACGCTGCACCCCATGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFNENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGGAGCGCTTGGGCTCCGGGTTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGGGCTCGGCCACACCCC +
Preference number: 3 (lower is better)
Translates to: RSAWAPGSLNTV*AGLPAGARPHP
Trigger: GGGGTGTGGCCGAGCCCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCCAAGCGCTCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGCGCTGGGCGGGGGTTC +
Preference number: 3 (lower is better)
Translates to: PGPPRHRGKVFR*GARSPCAGRGF
Trigger: GAACCCCCGCCCAGCGCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp TTGGGCTCCGCCGGAGCGCTTGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGCTTCCTGCCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: LGSAGALGLRVP*TPSGRGFLPGL
Trigger: GAGCCCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCCAAGCGCTCCGGCGGAGCCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp TTGGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGGTCGCCCCAGCTGGTA +
Preference number: 3 (lower is better)
Translates to: LASPAAAAPGRY*LQRPLGSPQLV
Trigger: TACCAGCTGGGGCGACCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp GGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: GRPMGDVYSAGP*GSQTAPQGRER
Trigger: TCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CAAGGTCTTCCGGTGAGGCGCGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTGGTGGGGCTCGGGTGG +
Preference number: 3 (lower is better)
Translates to: QGLPVRREVAVR*AGVLRVVGLGW
Trigger: CCACCCGAGCCCCACCACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTCGCGCCTCACCGGAAGACCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCC +
Preference number: 3 (lower is better)
Translates to: LAAMLRTLLLGKASRAGALHGRD*RPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCGTTTCCTCCTGGACCT +
Preference number: 3 (lower is better)
Translates to: PGRPCQRSTVGT*GLAAAPFPPGP
Trigger: AGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp ATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCAGCTGGCAGGCCCGCC +
Preference number: 3 (lower is better)
Translates to: ITGGCSDYRLRP*APQRPPAGRPA
Trigger: GGCGGGCCTGCCAGCTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp GGCGTCTGCACCAGGGTCCCATCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCA +
Preference number: 3 (lower is better)
Translates to: GVCTRVPSYAAR*LPVSRQGVRQA
Trigger: TGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATGGGACCCTGGTGCAGACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp GCTCACTGCCGGGACTCCCCTCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATACT +
Preference number: 3 (lower is better)
Translates to: AHCRDSPQSPFH*PRPPRLRRADT
Trigger: AGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGAGGGGAGTCCCGGCAGTGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTaGGCGGTGAGGTGTGGCTGTGGCCCCCACGGCAGG +
Preference number: 3 (lower is better)
Translates to: RGLPVPFWRQLD*AVRCGCGPHGR
Trigger: CCTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGGGCTGGCAGCCATGTaGCGCACCTTGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: GADEDPLSPWCREARWPGGLAAM*RTLLLG
Trigger: GCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCCC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCC +
Preference number: 3 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSLHGRD*RPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGG +
Preference number: 3 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSWARTP*PALHGR
Trigger: CCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCCACCCCCACCCTTTaGGGCTCCGCCGGAGCGCTT +
Preference number: 3 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPTPTL*GSAGAL
Trigger: AAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp CTCAGTCTCCTTTCCATTGGCCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACTCCAGCGACCCTTGGG +
Preference number: 3 (lower is better)
Translates to: LSLLSIGLARRG*AGPILTPATLG
Trigger: CCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp AAAGAGGTCGTCGGCTCCCTCTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCGGCCCCTGCGAGTCCC +
Preference number: 3 (lower is better)
Translates to: KEVVGSLCRTRR*PSHGDPAPASP
Trigger: GGGACTCGCAGGGGCCGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGACCTCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGGGACTTGAGGCCTAGCGGCCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTG +
Preference number: 3 (lower is better)
Translates to: RDLRPSGRPVSS*TSAAQRQGLPV
Trigger: CACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGCTCCAGGTCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: PHVMVSVTCRLR*GEASAGSRSQG
Trigger: GCCCTGGGACCTGGAGCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCTCCGCCGGAGCGCTaGGGCTCCGGGTTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAPPER*GSGFPE
Trigger: TTCAGGGAACCCGGAGCCCAAGCGCTCCGGCGGAGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCT +
Preference number: 3 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSVSFP*ASPAAA
Trigger: AGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCTGCAGGACGAGGCGTaGCCCCAGTCACGGAGACCC +
Preference number: 3 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRLQDEA*PQSRRP
Trigger: GGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp CTGGGATGGGGTCCAAATGTCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTACGCAGCCCGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LGWGPNVSRPGV*TRVPSYAARCL
Trigger: AAGGCAGCGGGCTGCGTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCTGACATTTGGACCCCATCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCAGACGAGGACCCCTaGTCACCCTGGTGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVADEDP*SPWCRE
Trigger: CTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CATCAGGGCTGGACCGGGGCAACAGATGGGGCCGGGTaGGGTAATGCTGTCGGAGCTCGGGAGGACCATGCC +
Preference number: 3 (lower is better)
Translates to: HQGWTGATDGAG*GNAVGAREDHA
Trigger: GGCATGGTCCTCCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGCCCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp AGCCTTGCCTGGCTGCGAGGTCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCTGGGTGGCACACCTCG +
Preference number: 3 (lower is better)
Translates to: SLAWLRGPRREH*APPAPAGWHTS
Trigger: CGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGGACCTCGCAGCCAGGCAAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTG +
Preference number: 3 (lower is better)
Translates to: RPGGWLRHFPTL*QLGAQRAGASV
Trigger: CACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: RRPEFSTHVWSC*GPVAVTVHQPQ
Trigger: CTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGGCAGGGGGATCCGTaGGCCTCTGCCCCTCCCACC +
Preference number: 3 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARQGDP*ASAPPT
Trigger: GGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCT +
Preference number: 3 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSVSFP*ASPAAA
Trigger: AGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCTGCAGGACGAGGCGTaGCCCCAGTCACGGAGACCC +
Preference number: 3 (lower is better)
Translates to: TLPASSDPQLLRTGPGALLQDEA*PQSRRP
Trigger: GGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCCAGAAAGGCTGGCCTaGCCCATGCTGGGGATGGGA +
Preference number: 3 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEPERLA*PMLGMG
Trigger: TCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTGG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGTGGGAGGGAGGCCTaGCAGTGGGCGTACCTTGAG +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWGGREA*QWAYLE
Trigger: CTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCCATCATCGCTGCCACC +
Preference number: 3 (lower is better)
Translates to: ASRAGASQTQVL*ASRRLPIIAAT
Trigger: GGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CCGCGGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACCGCGGACTGCCTGTCC +
Preference number: 3 (lower is better)
Translates to: PRWEGGLAVGVP*VDCPETADCLS
Trigger: GGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACCGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp GAAGGCACGTGGGGCATTGAGCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAGGCAGCGCCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: EGTWGIERVPSA*ADPWVKAAPAG
Trigger: TCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCCAGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCCTTGTCACCCTGGTGC +
Preference number: 3 (lower is better)
Translates to: QTLSSLGLALEH*GADEDPLSPWC
Trigger: GCACCAGGGTGACAAGGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGG +
Preference number: 3 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIWARTP*PALHGR
Trigger: CCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCCACCCCCACCCTTTaGGGCTCCGCCGGAGCGCTT +
Preference number: 3 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPTPTL*GSAGAL
Trigger: AAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGAAGGCACGTGGGGCATaGAGCGTGTGCCTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRKARGA*SVCLQP
Trigger: AGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAACAACCTGACAGCCTaGCCTGGCTGCGAGGTCCTA +
Preference number: 3 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQNNLTA*PGCEVL
Trigger: TAGGACCTCGCAGCCAGGCAAGGCTGTCAGGTTGTT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCCATGTTGCGCACCTaGCTGCTGGGCAAGGCGTCA +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAMLRT*LLGKAS
Trigger: TGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGTGGGAGGGAGGCCTaGCAGTGGGCGTACCTTGAG +
Preference number: 3 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGGREA*QWAYLE
Trigger: CTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GGTGGGGGCTGGGGTCAGCTTTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTCTGCCAGAAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: GGGWGQLCSQRP*VEDSSFCQKGW
Trigger: CCAGCCTTTCTGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCAAAGCTGACCCCAGCCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp ATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCTCCCGCCTTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: IWHQILSSPAFT*RKAPEPPALSQ
Trigger: CTGGGACAAGGCGGGAGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CTGGGGATGGGACGGGAGGGATGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTGAGCTCCATCCACCCA +
Preference number: 3 (lower is better)
Translates to: LGMGREGWCHPW*GWGFLLSSIHP
Trigger: TGGGTGGATGGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATGACACCATCCCTCCCGTCCCATCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCT +
Preference number: 3 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSVSFP*ASPAAA
Trigger: AGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAAGGCACGTGGGGCATaGAGCGTGTGCCTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWKARGA*SVCLQP
Trigger: AGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCG +
Preference number: 3 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPFPYP*AIRGAA
Trigger: CGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCG +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPFPYP*AIRGAA
Trigger: CGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: AKPSLANYRRLQ*LQASPLRAAKA
Trigger: GGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGACTGCCTGTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: VGGRPCSGRTLS*LSRDRGLPVPF
Trigger: GAAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp CTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGCCCCCGAACCTCCCGC +
Preference number: 3 (lower is better)
Translates to: LSPHLAPNTLQP*VHLPEGPRTSR
Trigger: GCGGGAGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp AGCCTGGGCAGATCCGTGGGTGAAGGCAGCGCCTGCTaGAGCTTTTCTGCAGAAAAGAGGTCGTCGGCTCCC +
Preference number: 3 (lower is better)
Translates to: SLGRSVGEGSAC*SFSAEKRSSAP
Trigger: GGGAGCCGACGACCTCTTTTCTGCAGAAAAGCTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp AGGAGGGAGCATTGGGCACCTCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTATGGACGTCCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: RREHWAPPAPAG*HTSVTYGRPVW
Trigger: CCAGACAGGACGTCCATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCAGAAAGGCTGGCCTaGCCCATGCTGGGGATGGGA +
Preference number: 3 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPERLA*PMLGMG
Trigger: TCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp AAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTaGCCACGCCCACATGTGATGGTCTCCGTAACGTGC +
Preference number: 3 (lower is better)
Translates to: KGQDEQRCGPGH*PRPHVMVSVTC
Trigger: GCACGTTACGGAGACCATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CCTGCAGGGTGTGGGCCCGGAGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCAGCAGTGTTAACTGGG +
Preference number: 3 (lower is better)
Translates to: PAGCGPGAWGAA*HAFREAAVLTG
Trigger: CCCAGTTAACACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCCCATGCTCCGGGCCCACACCCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp AGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGAGGTAGCTCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: SSVSFQASPHHR*HHAPPRGSSGS
Trigger: ACTCCCAGAGCTACCTCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp TCCAGCACCTGCTGGGTGGCACACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTCCTTGTCCTGCAGGGT +
Preference number: 3 (lower is better)
Translates to: SSTCWVAHLGDL*TSCLELLVLQG
Trigger: ACCCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp TTTAACACTGCAGAGACCCGGTACAGAAACGTGGGGTaGCGGCTAGGGGAATCAGACAGACCAGGCGCGCGC +
Preference number: 3 (lower is better)
Translates to: FNTAETRYRNVG*RLGESDRPGAR
Trigger: GCGCGCGCCTGGTCTGTCTGATTCCCCTAGCCGCCACCCCACGTTTCTGTACCGGGTCTCTGCAGTGTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCC +
Preference number: 3 (lower is better)
Translates to: NNPCKALISELPAAAVITLHGRD*RPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp TCCTTGTCCTGCAGGGTGTGGGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAGAGAAGCAGCAGTGTT +
Preference number: 3 (lower is better)
Translates to: SLSCRVWARSMG*SVTCIQRSSSV
Trigger: AACACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCCCATGCTCCGGGCCCACACCCTGCAGGACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CTCAAACCCTGCTTCGTTCCTCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCTTCAGCCTGGGCAGAT +
Preference number: 3 (lower is better)
Translates to: LKPCFVPPGEGT*GIERVPSAWAD
Trigger: ATCTGCCCAGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAGGGTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCG +
Preference number: 3 (lower is better)
Translates to: RRPETYICGRQCRTTFLHPFPYP*AIRGAA
Trigger: CGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp AGCCCCTCAGGCCCTTCTATAAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGCCCTGCGTTCACCTGC +
Preference number: 3 (lower is better)
Translates to: SPSGPSISFHLI*HQILSSPAFTC
Trigger: GCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTTATAGAAGGGCCTGAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGCCATGTTGCGCACCTaGCTGCTGGGCAAGGCGTCA +
Preference number: 3 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFAMLRT*LLGKAS
Trigger: TGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGCCATGTTGCGCACCTaGCTGCTGGGCAAGGCGTCA +
Preference number: 3 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRAMLRT*LLGKAS
Trigger: TGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACCAGAAAGGCTGGCCTaGCCCATGCTGGGGATGGGA +
Preference number: 3 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAPERLA*PMLGMG
Trigger: TCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTGG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GAGCTCAGTTTATTAAATGTGTGCGAGTCGGACAGCTaGCGGTGTCGTCCTTACGCCGGACAGATGGCTTTA +
Preference number: 3 (lower is better)
Translates to: ELSLLNVCESDS*RCRPYAGQMAL
Trigger: TAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGCACACATTTAATAAACTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGAGGGTGAGCACGTGTTaGGCATCCCCAAGTCCAAAA +
Preference number: 3 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRRVSTC*ASPSPK
Trigger: TTTTGGACTTGGGGATGCCAAACACGTGCTCACCCT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGAACAACCTGACAGCCTaGCCTGGCTGCGAGGTCCTA +
Preference number: 3 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTNNLTA*PGCEVL
Trigger: TAGGACCTCGCAGCCAGGCAAGGCTGTCAGGTTGTT...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGGCCGGCCTCTGCATaGACGGGATCCGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGPASA*TGSARA
Trigger: CGCCCGTGCGGATCCCGTTCATGCAGAGGCCGGCCC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCGACGCGTAGCGCTTaGCAGTCTCCGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTATRSA*QSPAGR
Trigger: CCGCCCGGCCGGAGACTGTCAAGCGCTACGCGTCGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPSTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGGGCGCCCGCCACGTaGTGTCCAGCTCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRAPAT*CPAQPR
Trigger: GCGAGGCTGAGCTGGACAGCACGTGGCGGGCGCCCG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCAGGCTCCGCGACCGCTaGTGCCCGGGGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRLRDR*CPGLGT
Trigger: AGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGGGCCCTGCCGGGGTaGCGCTCGGAGCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRALPG*RSELFA
Trigger: TGCGAAGAGCTCCGAGCGGCACCCCGGCAGGGCCCG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGGTCCGGCCGGGCTTTaGGCCGTCCTTGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPGPAGL*AVLVCG
Trigger: CCCGCAGACAAGGACGGCTCAAAGCCCGGCCGGACC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCTGCGCGAGGTGCCGTaGGTCCAGCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTLREVP*VQLGLQ
Trigger: CTGGAGGCCGAGCTGGACGCACGGCACCTCGCGCAG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCGGGCGCCCGCCACGTaGTGTCCAGCTCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRARAPAT*CPAQPR
Trigger: GCGAGGCTGAGCTGGACAGCACGTGGCGGGCGCCCG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCGCCTCCCGCCTTGTaGCGGTGCCCCATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTAPPAL*RCPMAC
Trigger: ACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCTCCAGCAGCCGGATaGTGGCCCGGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPPAAG*WPGSAP
Trigger: GGGAGCTGAGCCGGGCCACCATCCGGCTGCTGGAGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGGGCGAGCTGGACATaGCCAGCAGCGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRASWT*PAACAL
Trigger: CAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCAGCTGGGCCACGATaGCCTCCATGCAGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPAGPR*PPCSRG
Trigger: GCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGAGTGCGCGGCGACCTaGCACCAGCGCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAECAAT*HQRGGH
Trigger: GTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGTGAGGCACAGCGACTaGAGCGCCCCGTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAVRHSD*SAPSPR
Trigger: CCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCAC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCGGGGCTCGGGACTTTaGCTGGAGCCGCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTRGSGL*LEPRAV
Trigger: CACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCGTGGAGCCCCGCAGTaGCAGGGCCGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRARGAPQ*QGRGGK
Trigger: CTTCCCGCCACGGCCCTGCCACTGCGGGGCTCCACG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGAGGCAGGGGCCGCGGTaGGAGGGAGGCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTRQGPR*EGGLAV
Trigger: CACTGCAAGGCCTCCCTCCCACCGCGGCCCCTGCCT...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGGCCGCAGCCAGGGATaGCGGTGCATCGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPGRSQG*RCIVVV
Trigger: GACGACGACGATGCACCGTCATCCCTGGCTGCGGCC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTGGCGTGGGCCGCCTTaGGCCGCAGCAGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQWRGPP*AAAAGA
Trigger: CGCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGGCAGCTCCAGCCCTaGTCTGTTCTTGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGQLQP*SVLARA
Trigger: GGCGCGGGCAAGAACAGAGCAGGGCTGGAGCTGCCC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCTGGCCGCCGGGCACTaGCCATTTCTCCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPLAAGH*PFLPPP
Trigger: AGGCGGAGGGAGAAATGGGCAGTGCCCGGCGGCCAG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGGTCGGAGGACTCGCTaGCGCTGGAGAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPGRRTR*RWRGLR
Trigger: CCTCAGCCCTCTCCAGCGGCAGCGAGTCCTCCGACC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCAGCAGCCGGATGGTaGCCCGGCTCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPAAGW*PGSAPQ
Trigger: TTGGGGAGCTGAGCCGGGCCACCATCCGGCTGCTGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCATGCGTGCGTCCTTaGCGCCCGGTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVACVRP*RPVPLG
Trigger: CCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGCGCCAGCTTGGCCTTaGCCTTGGCCGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAAPAWP*PWPPRL
Trigger: CAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCTCGGGACTTTGGCTaGAGCCGCGGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTARDFG*SRGLCQ
Trigger: CTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGCGACCTCCTCGGTCTaGACCACGGCGTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPATSSV*TTASLV
Trigger: GACCAGCGACGCCGTGGTCCAGACCGAGGAGGTCGC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 72 bp GAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGGGACTTGAGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: EGPRAQGWARTP*PALHGRDLRPS
Trigger: GCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAGCCTGCCCAGAGGCTaGCAGCCAGACACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVSLPRG*QPDTRG
Trigger: GCCCCGCGTGTCTGGCTGTCAGCCTCTGGGCAGGCT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCAGCCGTGTACTGGGCTaGCCTCGGGGGTCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQASRVLG*PRGSGR
Trigger: CCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCT...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCCTGGGGCTCCGTCTaGTGCACTCGGTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVAWGSV*CTRSCA
Trigger: GGCGCAGGACCGAGTGCAGCAGACGGAGCCCCAGGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCTGCCCGGCTGAGGGGTaGCATCCTCAGGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPCPAEG*HPQGVW
Trigger: CCACACACCCTGAGGATGGCACCCCTCAGCCGGGCA...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCCACGATGGCCTCCATaGAGCCGCGGCGCGCACACA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAPRWPP*SRGAHT
Trigger: TGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCGAGGCTGGACACATTaGGGAGGATGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRARGWTH*GGCRRR
Trigger: GCGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCCAGCGCCCGCTGCTTaGGCACGTACAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAPAPAA*ARTGWA
Trigger: TGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCGCTGCCCTGCCCGCTaGAAGGTTCACTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTRCPAR*KVHWGW
Trigger: CCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCACCCCCAGGCCCTCGTaGACGAAGGGTGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPTPRPS*TKGAEM
Trigger: CATCTCCGCACCCTTCGTGCACGAGGGCCTGGGGGT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCTCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPSYAAR*LPVSRQ
Trigger: TTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGA...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCGGGCGAGCTGGACATaGCCAGCAGCGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVRASWT*PAACAL
Trigger: CAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCAGCTCAGCCTCGCTaGGGCCGGCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPAQPR*GRPPPA
Trigger: GGCTGGAGGAGGCCGGCCCCAGCGAGGCTGAGCTGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAGGTGGGGCGGCCGGTaGGTCTTTGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVRWGGR*VFACPL
Trigger: CAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRALKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGCGCGCCATCAGGGCTaGACCGGGGCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAARHQG*TGATDG
Trigger: CCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTGGCGTGGGCCGCCTTaGGCCGCAGCAGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRWRGPP*AAAAGA
Trigger: CGCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCCTGCGGGCCACGCTaGTGTGCGGCAGCGACGCGT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQACGPR*CAAATR
Trigger: ACGCGTCGCTGCCGCACATCAGCGTGGCCCGCAGGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQGLRVP*TPSGRG
Trigger: GCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCCTCCACCTTGCTGTTaGCCGGCTGAGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTPPPCC*PAEGCH
Trigger: ATGGCACCCCTCAGCCGGGCAACAGCAAGGTGGAGG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAVAWQI*GSMGIG
Trigger: CCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCAC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCTTGGCCGCCACGGCTaGCTCCCCACTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRALGRHG*LPTGVL
Trigger: AAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCCGGCAGCCAGGCCTaGTTCCGGGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQAGSQA*FRAPGE
Trigger: CTCTCCAGGGGCCCGGAAGCAGGCCTGGCTGCCGGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGACGGGCACGGGGAGTaGGCGGCGACCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQDGHGE*AATWHQ
Trigger: CTGGTGCCAGGTCGCCGCGCACTCCCCGTGCCCGTC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTTCCCGGGACCCCTCTaGGGGCCGCTCATCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQFPGPL*GPLIQP
Trigger: CGGCTGGATGAGCGGCCCGCAGAGGGGTCCCGGGAA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCTGGCCGCCGGGCACTaGCCATTTCTCCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVLAAGH*PFLPPP
Trigger: AGGCGGAGGGAGAAATGGGCAGTGCCCGGCGGCCAG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGGAGCCGCGGGCTGTaGCAGGCAAGGGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQWSRGL*QARGRH
Trigger: GTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRASPAFT*RKAPEP
Trigger: AGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCTCCAGCAGCCGGATaGTGGCCCGGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPPAAG*WPGSAP
Trigger: GGGAGCTGAGCCGGGCCACCATCCGGCTGCTGGAGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCGGCCTCGGTGCCGTaGAGGATTTGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTAASVP*RICSSR
Trigger: TCTGCTGCTGCAAATCCTCCACGGCACCGAGGCCGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTGCGCACGTACAGGCTaGGCACGCAGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVCARTG*ARSCLG
Trigger: CCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCATGGCGAGCAGGACTaGGCGCGGCCCTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGHGEQD*ARPSRG
Trigger: GCCACGGGAGGGCCGCGCCCAGTCCTGCTCGCCATG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGAACCTTGCTCAGGTaGTCTGCCGGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAGTLLR*SAGSQA
Trigger: GGCCTGGCTGCCGGCAGACCACCTGAGCAAGGTTCC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCGCGCGCTCAGGGCTaGGCCAGGACGCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGPRAQG*ARTPLP
Trigger: TGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVSQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTACAGAGGCAGGGAGCTaGGAGGGCGCCGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVTEAGS*EGAAQR
Trigger: TCTCTGGGCGGCGCCCTCCCAGCTCCCTGCCTCTGT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGGGTGGCTACCTGTGTaGCCCGCACCCCCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQGWLPV*PAPPAQ
Trigger: CTGCGCAGGGGGTGCGGGCCACACAGGTAGCCACCC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000535453.5
3UTR CAA 72 bp GCCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCCGTTTCCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: ARTPLPALHGRD*RPSGRPVSSWT
Trigger: GGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 72 bp GGCTCACTGCCGGGACTCCCCTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATAC +
Preference number: 4 (lower is better)
Translates to: GSLPGLPSVSFP*ASPAAAAPGRY
Trigger: GTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGAGGGGAGTCCCGGCAGTGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTGGCACTGCCGCTGTTaGGGCTGTCGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAWHCRC*GCRWRG
Trigger: GCCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGGGCTCGGGCTCGCTaGGGGAGCTGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVRARAR*GSWRRS
Trigger: GCTCCTCCGCCAGCTCCCTCAGCGAGCCCGAGCCCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAGGGCTCGGGCTCGCTaGGGGAGCTGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRARAR*GSWRRS
Trigger: GCTCCTCCGCCAGCTCCCTCAGCGAGCCCGAGCCCT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCCGCTGGAGAGGGCTaGGGCCACACGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVAAGEG*GHTHQA
Trigger: GGCCTGGTGCGTGTGGCCTCAGCCCTCTCCAGCGGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCGACGCGTAGCGCTTaGCAGTCTCCGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRATRSA*QSPAGR
Trigger: CCGCCCGGCCGGAGACTGTCAAGCGCTACGCGTCGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGGGCAGATCCGTGGGTaGAGGCAGCGCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAGQIRG*RQRLLE
Trigger: CTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTSPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTQTQVL*ASRRLP
Trigger: GGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCTGGACTGGGCGGTaGGGTGTGGCTGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSWTGR*GVAVAP
Trigger: GGGGGCCACAGCCACACCTCACCGCCCAGTCCAGCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCGTCATTTGTTCTCTaGCCCCCAGGTGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPSFVL*PPGAPS
Trigger: TGAGGGGGCACCTGGGGGTCAGAGAACAAATGACGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGTTGGCGCGCATGCGTaGGTCCTTGGCGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQVGAHA*VLGARC
Trigger: GCACCGGGCGCCAAGGACGCACGCATGCGCGCCAAC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCGCGTTGGCGCGCATaGGTGCGTCCTTGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPRWRA*VRPWRP
Trigger: CGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAACCTGCAGCAGCTCTaGCACGGCCTGCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVNLQQL*HGLQPT
Trigger: GGTGGGCTGCAGGCCGTGGCAGAGCTGCTGCAGGTT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGCGCCTGCGCGAGGTaGCGTGCGTCCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSACAR*RASSSA
Trigger: GGCCGAGCTGGACGCACGGCACCTCGCGCAGGCGCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGTCGATGCGCGCCACTaGAAGCGCCAGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAVDARH*KRQLGL
Trigger: AAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGAC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCCGGCAGCCAGGCCTaGTTCCGGGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGAGSQA*FRAPGE
Trigger: CTCTCCAGGGGCCCGGAAGCAGGCCTGGCTGCCGGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGAGAGTGGCCCCTCTTaGGCCGCCAGTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTESGPS*AASFCS
Trigger: ACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGCGAGGAAAGGGAGCTaGATCGGGACAGCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPARKGS*IGTARV
Trigger: CACTCTCGCTGTCCCGATGCAGCTCCCTTTCCTCGC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCACGGGCTCTCGAAGCTaGCCAGCGAGCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRATGSRS*PASSQS
Trigger: GCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCAAAGCGCACGCTGCCTaGGTCCAGCTCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPKAHAA*VQLRWQ
Trigger: CTGCCATCTGAGCTGGACGCAGGCAGCGTGCGCTTT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCGGCCGGTGGGTCTTTaGCTGCCCGCTGGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRPVGL*LPAGPP
Trigger: CGGGGGACCAGCGGGCAGGCAAAGACCCACCGGCCG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGAGGGATGGCCGATGTaGGCCGGTGGGTTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAEGWPM*AGGLAW
Trigger: CCACGCCAACCCACCGGCGCACATCGGCCATCCCTC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTGGAGCCGCGGGCTGTaGCAGGCAAGGGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVWSRGL*QARGRH
Trigger: GTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCGTGGCGGGAAGCGTaGTGCGCAGGATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPWREA*CAGCGA
Trigger: TGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCTCGTGCACGAAGGGTaGGGAGATGGGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRALVHEG*GDGSLG
Trigger: GCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCCCCAGCGCTGTCCCTaGGAAGCAGCGGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQPQRCP*EAADPD
Trigger: GTCTGGGTCCGCTGCTTCGCAGGGACAGCGCTGGGG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGCTCGGGAGGACCATaGCGGTGGGCACGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRSSGGP*RWARRP
Trigger: GGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTTGCGCGCCAGGCCCTaGTCCGGCTGCGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQALRARP*SGCEKT
Trigger: CGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCTGCTTCCGGGCCCCTaGAGAGATTCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQLLPGP*RDSRPR
Trigger: GCGGGGCCTGGAATCTCTCCAGGGGCCCGGAAGCAG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCAGCTCAGCCTCGCTaGGGCCGGCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPAQPR*GRPPPA
Trigger: GGCTGGAGGAGGCCGGCCCCAGCGAGGCTGAGCTGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGCCGGGGAGCCGGAATaGCTACGGGCAGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGAGEPE*LRAARW
Trigger: CCACCTCGCTGCCCGTAGCCATTCCGGCTCCCCGGC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCACTGGGGATGGAGCTaGCGATGGACGGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAHWGWS*RWTGSR
Trigger: TCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTGCGTCCAGCTCAGATaGCAGCCGGCAGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQCVQLR*QPAALP
Trigger: CGGGAGCGCTGCCGGCTGCCATCTGAGCTGGACGCA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCAGTTCCAGCTCCTaGTCCGCGGCGCCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSSSSS*SAAPRG
Trigger: CCCTCGCGGCGCCGCGGACCAGGAGCTGGAACTGCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCTCATCCAGCCGGGTaGCTCGGGGCTTGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRAHPAG*LGACGA
Trigger: GGCGCCGCAAGCCCCGAGCCACCCGGCTGGATGAGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCACGGGGTGCCGGGCTaGGGACGTAGATCACTGTTC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAHGVPG*GRRSLF
Trigger: GAACAGTGATCTACGTCCCCAGCCCGGCACCCCGTG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGGGGTCCCTTTGGGCTaGGCACGGGGTGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGGVPLG*ARGAGL
Trigger: CAGCCCGGCACCCCGTGCCCAGCCCAAAGGGACCCC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGGGGTCCCTTTGGGCTaGGCACGGGGTGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQGVPLG*ARGAGL
Trigger: CAGCCCGGCACCCCGTGCCCAGCCCAAAGGGACCCC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCGGGGCTCGGGACTTTaGCTGGAGCCGCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQRGSGL*LEPRAV
Trigger: CACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTGCTGGAGTTGGTCTTaGGGGCGGCGACCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVCWSWS*GRRPPR
Trigger: CCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGGGTGGCGGAGGCAGTaGCCGGGGCTTTCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRGWRRQ*PGLSPR
Trigger: CCGCGGAGAAAGCCCCGGCCACTGCCTCCGCCACCC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQTCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTHPWWG*GFLLSS
Trigger: GGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTGCCCATGCTGGGGATaGGACGGGAGGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRACPCWG*DGRDGV
Trigger: GACACCATCCCTCCCGTCCCATCCCCAGCATGGGCA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQALKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQLALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPHVWSC*GPVAVT
Trigger: AGTGACCGCCACTGGCCCCCAACATGACCACACGTG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGACCCAGCAAGCCGACTaGCCAGCCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQTQQAD*PAQHPQ
Trigger: CTGGGGGTGCTGGGCTGGCCAGTCGGCTTGCTGGGT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGCCGCTGGAGAGGGCTaGGGCCACACGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEAAGEG*GHTHQA
Trigger: GGCCTGGTGCGTGTGGCCTCAGCCCTCTCCAGCGGC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRATAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGTGGCACACCTCGGTaGCTTATGGACGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGGTPR*LMDVLS
Trigger: AGACAGGACGTCCATAAGTCACCGAGGTGTGCCACC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAQTQVL*ASRRLP
Trigger: GGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGCTGGACTGGGCGGTaGGGTGTGGCTGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSWTGR*GVAVAP
Trigger: GGGGGCCACAGCCACACCTCACCGCCCAGTCCAGCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCCTGGGGCTCCGTCTaGTGCACTCGGTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAWGSV*CTRSCA
Trigger: GGCGCAGGACCGAGTGCAGCAGACGGAGCCCCAGGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCCGCCGTCTCGGGCCTaGAGCCAGTCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPPPSRA*SQSQQV
Trigger: GACCTGCTGGGACTGGCTGCAGGCCCGAGACGGCGG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCACGATGGCCTCCATaGAGCCGCGGCGCGCACACA +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPRWPP*SRGAHT
Trigger: TGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCCAGATTACGCAGCATaGCCACGGCGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQPDYAA*PRRPGP
Trigger: GGGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCAGCGCCCGCTGCTTaGGCACGTACAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPAPAA*ARTGWA
Trigger: TGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGGTGCTCCAGCGCCTaGGCGAGGTGCCGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRRCSSA*ARCRAS
Trigger: GGACGCACGGCACCTCGCGCAGGCGCTGGAGCACCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCCTTCTCTGCCTCCTTaGCGCCTCGGCGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAPSLPP*RLGGWA
Trigger: CGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCACCAGCTGGTCGATaGGCGCCACTGCAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPPAGR*APLQAP
Trigger: TGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCGCCAGTTTCTGCAGTaGCTTGCTGGCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTRQFLQ*LAGHRQ
Trigger: CTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTGCGCCGCCAGTTTCTaGAGTGCCTTGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRACAASF*SALLAT
Trigger: TGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCAGCGGTGGCGTCTTaGTCCGGCTGGGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPAVAS*SGWEAW
Trigger: CCATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGCCCTGCTCTGTTCTTaGCCGCGCCCCGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAALLCS*PRPETA
Trigger: AGCAGTCTCGGGGCGCGGGCAAGAACAGAGCAGGGC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCCTCGTCCGAGTCGTTaGCGTAGAAGCAGTACACGG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTPRPSR*RRSSTR
Trigger: CCGTGTACTGCTTCTACGGCAACGACTCGGACGAGG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGGCGGGGCAGCTGGTaGAGCCTTGGACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERRGSW*SLGRGR
Trigger: CCTGCCCCGTCCAAGGCTGCACCAGCTGCCCCGCCG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTTCCCGGGACCCCTCTaGGGGCCGCTCATCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPFPGPL*GPLIQP
Trigger: CGGCTGGATGAGCGGCCCGCAGAGGGGTCCCGGGAA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGGGCTGGGCACGGGGTaGCGGGCTGGGGACGTAGAT +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVGLGTG*RAGDVD
Trigger: ATCTACGTCCCCAGCCCGGCACCCCGTGCCCAGCCC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTCCGCGACCGCTGCTaGCCGGGGCTCGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLRDRC*PGLGTL
Trigger: CAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGAGGCTCCGCGACCGCTaGTGCCCGGGGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRLRDR*CPGLGT
Trigger: AGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCTCTGCGTCTTGTGCTaGTTCGCCAGAAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRALCVLC*FARRVR
Trigger: GCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCGCACGGGCGATCTCTaGGTCTTGTGCTGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVRTGDL*VLCCFA
Trigger: GGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQCRTRR*PSHGDP
Trigger: CGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGAGGACAGCTCCTTCTaGCAGAAAGGCTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTEDSSF*QKGWPC
Trigger: GCAAGGCCAGCCTTTCTGGCAGAAGGAGCTGTCCTC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGACCGCCAGCAAGGCCTaGGGCTCCGTCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQTASKA*GSVCCT
Trigger: AGTGCAGCAGACGGAGCCCCAGGCCTTGCTGGCGGT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGCGCGTCGCCAACATaGACAACAGCCAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRASPT*TTARRP
Trigger: TGGTCTTCTGGCTGTTGTCCATGTTGGCGACGCGCG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGAGATCTGCGGCTCGATaGGGATCGGGGCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQRSAAR*GSGRCR
Trigger: CCGGCAGCGCCCCGATCCCCATCGAGCCGCAGATCT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCACAGCACAGGTGGCCTaGCAGATCTGCGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRATAQVA*QICGSM
Trigger: CATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCACGCTCTTCAGGGTaGACTCCTTGGTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVARSSG*TPWWPA
Trigger: TGCGGGCCACCAAGGAGTCCACCCTGAAGAGCGTGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTCCCACAGCAGCTCCTaGTCACGGGCGCTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSHSSS*SRALRA
Trigger: GGCCCGCAGCGCCCGTGACCAGGAGCTGCTGTGGGA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCGGCGGCGCTGCCCATaGCGATCATCTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVRRRCP*RSSCAW
Trigger: CCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGGCCGCCTGGTGCTTaGCGGGCCGATGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERPPGA*RADGPA
Trigger: TGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGCTTGGCCTTGGCCTTaGCCGCCACGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPAWPWP*PPRLPP
Trigger: GGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGAGGCTGCCCACACCTaGGGTCCTCGCGGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQEAAHT*GPRGAK
Trigger: CTTCGCGCCGCGAGGACCCCAGGTGTGGGCAGCCTC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTCGGGACAGCGAGAGTaGCCCCTCTTGCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQSGQRE*PLLRRQ
Trigger: CTGGCGGCGCAAGAGGGGCCACTCTCGCTGTCCCGA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGGATGGAGCTGGCGATaGACGGGCTCTCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVGWSWR*TGSRSC
Trigger: GCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCGTCTTGCTCCGGCTaGGAGGCATGGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQASCSG*EAWSVR
Trigger: CCGGACAGACCATGCCTCCCAGCCGGAGCAAGACGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGTGAGGCACAGCGACTaGAGCGCCCCGTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRVRHSD*SAPSPR
Trigger: CCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCAC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGTCGCGTCCGCCTCCTaGGCCCGGGTCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPVASAS*ARVLGD
Trigger: GTCACCAAGGACCCGGGCCCAGGAGGCGGACGCGAC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTGGCGCCCTCCTGGATaGCGCGCCACTCCACGCTAT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAWRPPG*RATPRY
Trigger: ATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGGGGTCCCTTTGGGCTaGGCACGGGGTGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEGVPLG*ARGAGL
Trigger: CAGCCCGGCACCCCGTGCCCAGCCCAAAGGGACCCC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCAGCTCCGAGGTCTTaGCAGGCCGGTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPAPRS*QAGVGS
Trigger: GGAGCCTACACCGGCCTGCCAAGACCTCGGAGCTGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGCGCGCCGGCGTTTTaGGCACCGGGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGECAPAF*APGRLR
Trigger: CCGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACGGGCTCTCGGAGGTaGTGCGCCGGGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTGSRR*CAGQGA
Trigger: AGCGCCCTGCCCGGCGCACCACCTCCGAGAGCCCGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGACTATTCCAGGAGGGTaGCGGAGGCAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQTIPGG*RRQWPG
Trigger: CCCCGGCCACTGCCTCCGCCACCCTCCTGGAATAGT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGTGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTWCHPW*GWGFLL
Trigger: CAGAAGGAAACCCCAGCCCCACCACGGATGACACCA...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQLSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGACCCCTTGTCACCCTaGTGCAGAGAGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVDPLSP*CREARW
Trigger: CCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGGAGGACCATGCCGGTaGGCACGGCGCCCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGGGPCR*ARRPEF
Trigger: GAACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGGAGGACCATGCCGGTaGGCACGGCGCCCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQGGPCR*ARRPEF
Trigger: GAACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCACCACGAAGGCCAGTaGGTGACACCTAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTHHEGQ*VTPKLC
Trigger: GCACAGCTTAGGTGTCACCCACTGGCCTTCGTGGTG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTACAGGCCCACGTGGTaGTGGCCAGGCAATCCGGGG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAYRPTW*WPGNPG
Trigger: CCCCGGATTGCCTGGCCACCACCACGTGGGCCTGTA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCGCCGCCGCTCTCGATaGTGGCCAGCGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQRRRSR*WPASCS
Trigger: AGAGCAACTCGCTGGCCATCATCGAGAGCGGCGGCG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCTCCCACTGCAGGCTaGACTGGGTGGCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSPTAG*TGWPRG
Trigger: CCCCCGAGGCCACCCAGTTCAGCCTGCAGTGGGAGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTCTCCCACTGCAGGCTaGACTGGGTGGCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRSPTAG*TGWPRG
Trigger: CCCCCGAGGCCACCCAGTTCAGCCTGCAGTGGGAGA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGCAAGGCCAGCGCGCTaGGGCTGGAGGCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEARPAR*GWRRTR
Trigger: TCTCGTGCGCCTCCAGCCTCAGCGCGCTGGCCTTGC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGGGCAGGGCCGAGCTaGTGCACCGCTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQWAGPS*CTAAEA
Trigger: AGCTTCTGCAGCGGTGCATCAGCTCGGCCCTGCCCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGCCTGCGGGCCACGCTaGTGTGCGGCAGCGACGCGT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEACGPR*CAAATR
Trigger: ACGCGTCGCTGCCGCACATCAGCGTGGCCCGCAGGC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVTAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAAGCCCCAGCCGTCCTaGCTGATCCTGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGKPQPS*LILGWG
Trigger: CCCCCAACCCAGGATCAGGCAGGACGGCTGGGGCTT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGAGCCGTGTACTGGGCTaGCCTCGGGGGTCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESRVLG*PRGSGR
Trigger: CCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCT...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCGAGGCGCGGATCTGTaGCCGCTGCACCATCTCGTC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGRGADL*PLHHLV
Trigger: GACGAGATGGTGCAGCGGGCACAGATCCGCGCCTCG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCCTGGGGCTCCGTCTaGTGCACTCGGTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRAWGSV*CTRSCA
Trigger: GGCGCAGGACCGAGTGCAGCAGACGGAGCCCCAGGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGCCCGGCTGAGGGGTaGCATCCTCAGGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQCPAEG*HPQGVW
Trigger: CCACACACCCTGAGGATGGCACCCCTCAGCCGGGCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTGCCCGGCTGAGGGGTaGCATCCTCAGGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGCPAEG*HPQGVW
Trigger: CCACACACCCTGAGGATGGCACCCCTCAGCCGGGCA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGTTGGCGCGCATGCGTaGGTCCTTGGCGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRVGAHA*VLGARC
Trigger: GCACCGGGCGCCAAGGACGCACGCATGCGCGCCAAC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCGCGTTGGCGCGCATaGGTGCGTCCTTGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPRWRA*VRPWRP
Trigger: CGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCATCTGCTCCAGCACGTaGAGGACGCGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAICSST*RTRISL
Trigger: CAAGGAGATGCGCGTCCTGCACGTGCTGGAGCAGAT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCCAGGGCAGTCACGCTaGCCGCCTCCCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQPGQSR*PPPSAP
Trigger: AGGTGCTGAGGGAGGCGGGCAGCGTGACTGCCCTGG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCGAGGCTGGACACATTaGGGAGGATGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRGWTH*GGCRRR
Trigger: GCGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCTGTGCGAAGTCAGATaGTGCAGCAGCGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTLCEVR*CSSVCR
Trigger: TCTGCAGACGCTGCTGCAGCATCTGACTTCGCACAG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGATGGGCCAGCAGGTTaGGCAGGGCGGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGDGPAG*AGRRRC
Trigger: GCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCAGCGTCCGCTTACGTaGAGCTGGGCTGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRQRPLT*SWAGGA
Trigger: CGCCCCGCCAGCCCAGCTGCACGTAAGCGGACGCTG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGAGGTGCTCCAGCGCCTaGGCGAGGTGCCGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRCSSA*ARCRAS
Trigger: GGACGCACGGCACCTCGCGCAGGCGCTGGAGCACCT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCCCTGCTTCTCCAGGTaGTCCAGCGCCTGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRPCFSR*SSACAR
Trigger: CCTCGCGCAGGCGCTGGAGCACCTGGAGAAGCAGGG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGAGTGGCGGCCTCGGCTaGCGGCGGGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRSGGLG*RRALLL
Trigger: GAGAAGCAGGGCCCGCCGGCAGCCGAGGCCGCCACT...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTAGTGGCGGCCTCGGCTaGCGGCGGGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSGGLG*RRALLL
Trigger: GAGAAGCAGGGCCCGCCGGCAGCCGAGGCCGCCACT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCCAGCGGTGGCGTCTTaGTCCGGCTGGGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRPAVAS*SGWEAW
Trigger: CCATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAAAGCGCACGCTGCCTaGGTCCAGCTCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVKAHAA*VQLRWQ
Trigger: CTGCCATCTGAGCTGGACGCAGGCAGCGTGCGCTTT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGACGGGCACGGGGAGTaGGCGGCGACCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSDGHGE*AATWHQ
Trigger: CTGGTGCCAGGTCGCCGCGCACTCCCCGTGCCCGTC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCTCCGCGGAGTCAGTaGAGGAGTCGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGPPRSQ*RSRPPG
Trigger: CCCAGGAGGACGACTCCTGCACTGACTCCGCGGAGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGGTGGCTCGGGGCTTaGGGCGCCGCAGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGWLGA*GAAGQT
Trigger: TGTCTGGCCTGCGGCGCCGCAAGCCCCGAGCCACCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTCCCGCGTGGCAGCTaGTGCCTGGTGCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLPRGS*CLVQPR
Trigger: ACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGATCTCTGCGTCTTGTaGTGCTTCGCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPDLCVL*CFARRV
Trigger: CACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGTCGGAGGACTCGCTaGCGCTGGAGAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGRRTR*RWRGLR
Trigger: CCTCAGCCCTCTCCAGCGGCAGCGAGTCCTCCGACC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCGGGCCCTGCCGGGGTaGCGCTCGGAGCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECERALPG*RSELFA
Trigger: TGCGAAGAGCTCCGAGCGGCACCCCGGCAGGGCCCG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCGTCCTCATCTCGGATaGGCCGCCAGGTCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRRPHLG*AARSCP
Trigger: CGGGCACGACCTGGCGGCGCATCCGAGATGAGGACG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCCCCAGCGCTGTCCCTaGGAAGCAGCGGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGPQRCP*EAADPD
Trigger: GTCTGGGTCCGCTGCTTCGCAGGGACAGCGCTGGGG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSPAFT*RKAPEP
Trigger: AGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCCATGTTGCGCACCTTaGTGCTGGGCAAGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVPCCAP*CWARRH
Trigger: GTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCCTGCAGGGCAGGAGTaGCCAAGGGCAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQPAGQE*PRAGWE
Trigger: CTCCCACCCTGCCCTTGGGCACTCCTGCCCTGCAGG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCCTTCAGCTGGTCCCTaGTGGCCCCGGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRPSAGP*WPRQPL
Trigger: CAGGGGCTGCCGGGGCCAGCAGGGACCAGCTGAAGG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCCCGGAGCCGTGTACTaGGCTGCCCTCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSPGAVY*AALGGP
Trigger: CGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGCATGCGTGCGTCCTTaGCGCCCGGTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSACVRP*RPVPLG
Trigger: CCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGCATGCGTGCGTCCTTaGCGCCCGGTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRACVRP*RPVPLG
Trigger: CCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTGTGCAGCGCCGCGTTaGCGCGCATGCGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRCAAPR*RACVRP
Trigger: AGGACGCACGCATGCGCGCCAACGCGGCGCTGCACA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGATCTGCGGCTCGATaGGGATCGGGGCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGRSAAR*GSGRCR
Trigger: CCGGCAGCGCCCCGATCCCCATCGAGCCGCAGATCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTCCCACAGCAGCTCCTaGTCACGGGCGCTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRSHSSS*SRALRA
Trigger: GGCCCGCAGCGCCCGTGACCAGGAGCTGCTGTGGGA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCTGGGGACACGGCGGTaGCGGCCGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECELGTRR*RPPGAW
Trigger: CCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCTGGGGACACGGCGGTaGCGGCCGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRLGTRR*RPPGAW
Trigger: CCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCGCTTACGTGCAGCTaGGCTGGCGGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPLTCS*AGGAPG
Trigger: CCCAGGCGCCCCGCCAGCCCAGCTGCACGTAAGCGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCATGGCGAGCAGGACTaGGCGCGGCCCTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEHGEQD*ARPSRG
Trigger: GCCACGGGAGGGCCGCGCCCAGTCCTGCTCGCCATG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCAGCATATGTTCGCGTaGGCAGTACCCGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVQHMFA*AVPVAG
Trigger: GCCAGCGACGGGTACTGCCCACGCGAACATATGCTG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCTGCTTCCGGGCCCCTaGAGAGATTCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRLLPGP*RDSRPR
Trigger: GCGGGGCCTGGAATCTCTCCAGGGGCCCGGAAGCAG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCACGAGCTGGACGGCGTaGCGTCTTCCACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPTSWTA*RLPPPG
Trigger: GCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCACTGGGGATGGAGCTaGCGATGGACGGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQHWGWS*RWTGSR
Trigger: TCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAAGGTTCACTGGGGATaGAGCTGGCGATGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVKVHWG*SWRWTG
Trigger: GCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTCCGGCTGGGAGGCATaGTCTGTCCGGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSGWEA*SVRGCR
Trigger: CCGACAGCCCCGGACAGACCATGCCTCCCAGCCGGA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTGCGTCCAGCTCAGATaGCAGCCGGCAGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPCVQLR*QPAALP
Trigger: CGGGAGCGCTGCCGGCTGCCATCTGAGCTGGACGCA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCCCCATGGCCTGTCTaGCAGAGGTGGGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAPWPV*QRWGGR
Trigger: CCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGTGAGGCACAGCGACTaGAGCGCCCCGTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWVRHSD*SAPSPR
Trigger: CCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCAC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTCCCGGCCTCGTGGATaGACGGCCGGCGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSRPRG*TAGGSE
Trigger: CTCGGAGCCGCCGGCCGTCCATCCACGAGGCCGGGA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCTGGCACCCCGGGCGTaGTCTTCTGTGTGCCACGTG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGLAPRA*SSVCHV
Trigger: CACGTGGCACACAGAAGACCACGCCCGGGGTGCCAG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGGGGCTCGGGACTTTaGCTGGAGCCGCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRGSGL*LEPRAV
Trigger: CACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTACGGGCTCTCGGAGGTaGTGCGCCGGGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSTGSRR*CAGQGA
Trigger: AGCGCCCTGCCCGGCGCACCACCTCCGAGAGCCCGT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCGTGGAGCCCCGCAGTaGCAGGGCCGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWRGAPQ*QGRGGK
Trigger: CTTCCCGCCACGGCCCTGCCACTGCGGGGCTCCACG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGACTATTCCAGGAGGGTaGCGGAGGCAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQTIPGG*RRQWPG
Trigger: CCCCGGCCACTGCCTCCGCCACCCTCCTGGAATAGT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGLSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGACAGAGGCAGGGAGCTaGGAGGGCGCCGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQTEAGS*EGAAQR
Trigger: TCTCTGGGCGGCGCCCTCCCAGCTCCCTGCCTCTGT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGTGGGAGGCGGGGCTaGCAGCCATGTTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGGRRG*QPCCAP
Trigger: AGGTGCGCAACATGGCTGCCAGCCCCGCCTCCCACC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGGTGGGAGGCGGGGCTaGCAGCCATGTTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVGGRRG*QPCCAP
Trigger: AGGTGCGCAACATGGCTGCCAGCCCCGCCTCCCACC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGAGGCAGGGGCCGCGGTaGGAGGGAGGCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERQGPR*EGGLAV
Trigger: CACTGCAAGGCCTCCCTCCCACCGCGGCCCCTGCCT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQLALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCGCGCCATCAGGGCTaGACCGGGGCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVARHQG*TGATDG
Trigger: CCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCTGGGGAGGGCGCGGTaGTGCCTTCCGGACAGACGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWLGRAR*CLPDRR
Trigger: CCGTCTGTCCGGAAGGCATCACCGCGCCCTCCCCAG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGGCCGCAGCCAGGGATaGCGGTGCATCGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRGRSQG*RCIVVV
Trigger: GACGACGACGATGCACCGTCATCCCTGGCTGCGGCC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTCTGCACCCGCCCTTaGGGCACCCTCAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLCTRP*GTLKQW
Trigger: CCACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCAAGGCCAGCGCGCTaGGGCTGGAGGCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWARPAR*GWRRTR
Trigger: TCTCGTGCGCCTCCAGCCTCAGCGCGCTGGCCTTGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGGGTCTCGTCAGCAATaGGGCTGGGCTGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRGSRQQ*GWAGSG
Trigger: CCCGGACCCAGCCCAGCCTCATTGCTGACGAGACCC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTGTAGGGCCTTCAGCTaGTCCAGCACCTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQACRAFS*SSTSVC
Trigger: GCAGACGGAGGTGCTGGAGCAGCTGAAGGCCCTACA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCGGATCTGTGCCCGCTaGACCATCTCGTCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQRICAR*TISSEV
Trigger: CACCTCGGACGAGATGGTGCAGCGGGCACAGATCCG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGAGCTCCTTGTCAATCTaGTCCAGGCGCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQSSLSI*SRREAR
Trigger: CCGCGCCTCGCGCCTGGAGCAGATTGACAAGGAGCT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGGGGCTCCGTCTGCTaGACTCGGTCCTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRWGSVC*TRSCAS
Trigger: GGAGGCGCAGGACCGAGTGCAGCAGACGGAGCCCCA...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCCAGGGCAGTCACGCTaGCCGCCTCCCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRPGQSR*PPPSAP
Trigger: AGGTGCTGAGGGAGGCGGGCAGCGTGACTGCCCTGG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGCCCGCAGGACACACTaGACCAGGGCAGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPARRTH*TRAVTL
Trigger: CAGCGTGACTGCCCTGGTGCAGTGTGTCCTGCGGGC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCCAGATTACGCAGCATaGCCACGGCGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGPDYAA*PRRPGP
Trigger: GGGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGAGTGGCGGCCTCGGCTaGCGGCGGGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALSGGLG*RRALLL
Trigger: GAGAAGCAGGGCCCGCCGGCAGCCGAGGCCGCCACT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGTGCGAGCCAGCGCCTaGCCCTGCAGGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSVRASA*PCRKGL
Trigger: CAGCCCCTTCCTGCAGGGGCAGGCGCTGGCTCGCAC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCTTCTCTGCCTCCTTaGCGCCTCGGCGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPSLPP*RLGGWA
Trigger: CGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCACTGGTGTCCTTCTCTaGCTCCTTGCCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGTGVLL*LLAASA
Trigger: CGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGACTGGTGTCCTTCTCTaGCTCCTTGCCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQTGVLL*LLAASA
Trigger: CGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCGAGCTCACAGAGCTaGAGCGGCTCAGCACAAGCG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQASSQS*SGSAQA
Trigger: CGCTTGTGCTGAGCCGCTGCAGCTCTGTGAGCTCGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTCCTCCCGCCGCCGGTaGCCTGCAAAGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSSRRR*PAKWRP
Trigger: CGGCCTCCACTTTGCAGGGCACCGGCGGCGGGAGGA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCGCCTCCCGCCTTGTaGCGGTGCCCCATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAPPAL*RCPMAC
Trigger: ACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGAGGGATGGCCGATGTaGGCCGGTGGGTTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVREGWPM*AGGLAW
Trigger: CCACGCCAACCCACCGGCGCACATCGGCCATCCCTC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCCTCCTTCCGGCCCTaGGGACGCTCCCGCGTAAAA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVASFRP*GRSRVK
Trigger: TTTTACGCGGGAGCGTCCGCAGGGCCGGAAGGAGGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGAGCTGATGCACCGCTaGAGAAGCTCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVELMHR*RSSSAA
Trigger: GGCCGCGGAGGAGCTTCTGCAGCGGTGCATCAGCTC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGAGCTGATGCACCGCTaGAGAAGCTCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGELMHR*RSSSAA
Trigger: GGCCGCGGAGGAGCTTCTGCAGCGGTGCATCAGCTC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGGGTGGCTCGGGGCTTaGGGCGCCGCAGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPGWLGA*GAAGQT
Trigger: TGTCTGGCCTGCGGCGCCGCAAGCCCCGAGCCACCC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGTGGCTCGGGGCTTaGGGCGCCGCAGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGWLGA*GAAGQT
Trigger: TGTCTGGCCTGCGGCGCCGCAAGCCCCGAGCCACCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCTCCCGCGTGGCAGCTaGTGCCTGGTGCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGELPRGS*CLVQPR
Trigger: ACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCGTGGTCTTCTGTGTaGCACGTGGCTTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQAWSSV*HVASRG
Trigger: GCCCCGAGAAGCCACGTGGCACACAGAAGACCACGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCTCCGCGACCGCTGCTaGCCGGGGCTCGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWLRDRC*PGLGTL
Trigger: CAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGCTTCGCCAGAAGGGTaGGCGCCGGCGTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPASPEG*APAFWA
Trigger: TGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCGCCGGGCCGGCCTCTaGATGAACGGGATCCGCACG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSRRAGL*MNGIRT
Trigger: CGTGCGGATCCCGTTCATGCAGAGGCCGGCCCGGCG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCCGTGGCGGGAAGCGTaGTGCGCAGGATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEPWREA*CAGCGA
Trigger: TGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSYAAR*LPVSRQ
Trigger: TTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSPAFT*RKAPEP
Trigger: AGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCTGCTGGAGCTTTTCTaGAGAAAAGAGGTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTLLELF*RKEVVG
Trigger: GCCGACGACCTCTTTTCTGCAGAAAAGCTCCAGCAG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGAAAGCAACACATGTCTaGCTCCTGCTCCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTKATHV*LLLPKP
Trigger: GGGTTTGGGGAGCAGGAGGCAGACATGTGTTGCTTT...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGAGCTCCTGCAGCGTCTaGGATCACAGGGTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQSSCSV*DHRVRG
Trigger: CCCTCTGACCCTGTGATCCCAGACGCTGCAGGAGCT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCACCGCCAGCAAGGCCTaGGGCTCCGTCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPTASKA*GSVCCT
Trigger: AGTGCAGCAGACGGAGCCCCAGGCCTTGCTGGCGGT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCATCCTCAGGGTGTGTaGGGACCTCTGTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAHPQGV*GPLSRG
Trigger: ACCCCGAGACAGAGGTCCCCACACACCCTGAGGATG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCGGGCGAGCTGGACATaGCCAGCAGCGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECERASWT*PAACAL
Trigger: CAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCAGCTGGGCCACGATaGCCTCCATGCAGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPAGPR*PPCSRG
Trigger: GCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCTGTCGGAGGCCAGCTaGGCCACGATGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGALSEAS*ATMASM
Trigger: CATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGGGTGGCGACGAGGCTaGACACATTGCGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGGWRRG*THCGGC
Trigger: GCATCCTCCGCAATGTGTCCAGCCTCGTCGCCACCC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCGCTTACGTGCAGCTaGGCTGGCGGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPLTCS*AGGAPG
Trigger: CCCAGGCGCCCCGCCAGCCCAGCTGCACGTAAGCGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCTTGGCCTTGGCCTTaGCCGCCACGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGAWPWP*PPRLPP
Trigger: GGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCGCCAGCTTGGCCTTaGCCTTGGCCGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGAPAWP*PWPPRL
Trigger: CAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGATGTCCTCCACCAGCTaGTCGATGCGCGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQMSSTS*SMRATA
Trigger: TGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACAT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTCTGCAGTGCCTTGCTaGCCACAGACAGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQSAVPC*PQTAGQ
Trigger: CTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTCGGGACAGCGAGAGTaGCCCCTCTTGCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRSGQRE*PLLRRQ
Trigger: CTGGCGGCGCAAGAGGGGCCACTCTCGCTGTCCCGA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCCGGGGAGCCGGAATaGCTACGGGCAGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGAGEPE*LRAARW
Trigger: CCACCTCGCTGCCCGTAGCCATTCCGGCTCCCCGGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACGAGCTGGACGGCGTaGCGTCTTCCACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTSWTA*RLPPPG
Trigger: GCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGAAGGTTCACTGGGGATaGAGCTGGCGATGGACGGGC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQKVHWG*SWRWTG
Trigger: GCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCGCTGCAAGGTTCACTaGGGATGGAGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQRCKVH*GWSWRW
Trigger: CCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCGTCTTGCTCCGGCTaGGAGGCATGGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGASCSG*EAWSVR
Trigger: CCGGACAGACCATGCCTCCCAGCCGGAGCAAGACGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCCTGTCTGGCAGAGGTaGGGCGGCCGGTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAPVWQR*GGRWVF
Trigger: AAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACGAGGCCTCCCGCGTaGCAGCTGCTGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTRPPA*QLLPGA
Trigger: TGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGGACTCGCTGCCGCTaGAGAGGGCTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRRTRCR*RGLRPH
Trigger: GTGTGGCCTCAGCCCTCTCCAGCGGCAGCGAGTCCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGGACTCGCTGCCGCTaGAGAGGGCTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGARTRCR*RGLRPH
Trigger: GTGTGGCCTCAGCCCTCTCCAGCGGCAGCGAGTCCT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGAGCCTTGGCGAGGCTaGGACCGTCCACGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVREPWRG*DRPRRC
Trigger: GCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCGGAGATGGGAGCCTTaGCGAGGCTGGGACCGTCCA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVRRWEP*RGWDRP
Trigger: TGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCGGAGATGGGAGCCTTaGCGAGGCTGGGACCGTCCA +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRRWEP*RGWDRP
Trigger: TGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVREVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTCACCAGCGACCTGGTaGCTGGCTTCGCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQSPATW*LASPFP
Trigger: GGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGACAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCTGGGCGGTGAGGTGTaGCTGTGGCCCCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECELGGEV*LWPPRQ
Trigger: CTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCGCGCCATCAGGGCTaGACCGGGGCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRARHQG*TGATDG
Trigger: CCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCACGCAGGGAGACCCTaGGGTCTGGCTCGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRHAGRP*GLARAP
Trigger: TGGGGCTCGAGCCAGACCCCAGGGTCTCCCTGCGTG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTCGACCGACAGACGATaGGTCGGCCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQASTDRR*VGLSFP
Trigger: TGGGAAGGAGAGGCCGACCCATCGTCTGTCGGTCGA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGGTTGTACAGGCTGGTaGTGTCCATCTGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVGCTGW*CPSVGP
Trigger: AGGCCCTACAGATGGACATCACCAGCCTGTACAACC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGCCGCCGCTCTCGATaGTGGCCAGCGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERRRSR*WPASCS
Trigger: AGAGCAACTCGCTGGCCATCATCGAGAGCGGCGGCG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTGGCACTGCCGCTGTTaGGGCTGTCGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGWHCRC*GCRWRG
Trigger: GCCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCTCTGCACCCGCCCTTaGGGCACCCTCAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRLCTRP*GTLKQW
Trigger: CCACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGTCCGGCCGGGCTTTaGGCCGTCCTTGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGPAGL*AVLVCG
Trigger: CCCGCAGACAAGGACGGCTCAAAGCCCGGCCGGACC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGGCAGATCCGTGGGTaGAGGCAGCGCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGQIRG*RQRLLE
Trigger: CTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGGAGAAGGCGAAAGTaGGCTCAGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQWRRRK*AQDSGW
Trigger: CCACCCCGAGTCCTGAGCTCACTTTCGCCTTCTCCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVAVGVP*VDCPET
Trigger: GGTCTCTGGACAATCAACTCAAGGTACGCCCACTGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCCCCATGTTCCAGCTaGGGTCACCATCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAPCSS*GHHPMP
Trigger: GGGCATGGGATGGTGACCTCAGCTGGAACATGGGGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCCTCCACCTTGCTGTTaGCCGGCTGAGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRPPPCC*PAEGCH
Trigger: ATGGCACCCCTCAGCCGGGCAACAGCAAGGTGGAGG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGACCACCTCCACCTTaGTGTTGCCCGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRRPPPP*CCPAEG
Trigger: CCCCTCAGCCGGGCAACAGCAAGGTGGAGGTGGTCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAGACCACCTCCACCTTaGTGTTGCCCGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRPPPP*CCPAEG
Trigger: CCCCTCAGCCGGGCAACAGCAAGGTGGAGGTGGTCT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCCCTGGTCCGGCTaGGAGAAGACGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGRPWSG*EKTMLC
Trigger: GCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEVAWQI*GSMGIG
Trigger: CCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCAC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCACAAGTTCCGAAGGATaGTGGACACCACCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRATSSEG*WTPPGG
Trigger: TCCACCAGGTGGTGTCCAGCATCCTTCGGAACTTGT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCGAGGCTGGACACATTaGGGAGGATGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRRGWTH*GGCRRR
Trigger: GCGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCGTGCCGCACGCGTTaGTCACGATGGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQACRTR*SRWSGC
Trigger: ACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCCAGCGCCCGCTGCTTaGGCACGTACAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSPAPAA*ARTGWA
Trigger: TGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCCTCCAGCGCCCGCTaGTTGCGCACGTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGASSAR*LRTYRL
Trigger: CAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTGCGAGCCAGCGCCTaGCCCTGCAGGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALVRASA*PCRKGL
Trigger: CAGCCCCTTCCTGCAGGGGCAGGCGCTGGCTCGCAC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCCACCAGCTGGTCGATaGGCGCCACTGCAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRPPAGR*APLQAP
Trigger: TGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTCGTCGGACGAGGTGTaGAGGGCGGAGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVSSDEV*RAEMSS
Trigger: GGAGGACATCTCCGCCCTGCACACCTCGTCCGACGA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCGAGCTCACAGAGCTaGAGCGGCTCAGCACAAGCG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRASSQS*SGSAQA
Trigger: CGCTTGTGCTGAGCCGCTGCAGCTCTGTGAGCTCGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACGGGCTCTCGAAGCTaGCCAGCGAGCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATGSRS*PASSQS
Trigger: GCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGATGGTGCCGCTGCCCTaGCCGCTGCAAGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQMVPLP*PLQGSL
Trigger: CAGTGAACCTTGCAGCGGGCAGGGCAGCGGCACCAT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGGCAGCTCCAGCCCTaGTCTGTTCTTGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGQLQP*SVLARA
Trigger: GGCGCGGGCAAGAACAGAGCAGGGCTGGAGCTGCCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCTGGCCGCCGGGCACTaGCCATTTCTCCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSLAAGH*PFLPPP
Trigger: AGGCGGAGGGAGAAATGGGCAGTGCCCGGCGGCCAG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCGTGGTCTTCTGTGTaGCACGTGGCTTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAAWSSV*HVASRG
Trigger: GCCCCGAGAAGCCACGTGGCACACAGAAGACCACGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCTCCGCGACCGCTGCTaGCCGGGGCTCGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALLRDRC*PGLGTL
Trigger: CAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGGCTCCGCGACCGCTaGTGCCCGGGGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARLRDR*CPGLGT
Trigger: AGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCTTCGCCAGAAGGGTaGGCGCCGGCGTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRASPEG*APAFWA
Trigger: TGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCGGGCCCTGCCGGGGTaGCGCTCGGAGCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRALPG*RSELFA
Trigger: TGCGAAGAGCTCCGAGCGGCACCCCGGCAGGGCCCG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRCRTRR*PSHGDP
Trigger: CGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTGTTGCGCACCTTGCTaGTGGGCAAGGCGTCACGGG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQCCAPC*WARRHG
Trigger: CCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCCAGAGACCGCGGACTaGCTGTCCCCTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGPETAD*LSPSGD
Trigger: GTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCCAGAGACCGCGGACTaGCTGTCCCCTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPPETAD*LSPSGD
Trigger: GTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGTGGGAGGGAGGCCTTaGAGTGGGCGTACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGVGGRP*SGRTLS
Trigger: ACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCACCACCAGCTGTCCCTaGCGATGGACAATGAAAACA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPTTSCP*RWTMKT
Trigger: TGTTTTCATTGTCCATCGGCAGGGACAGCTGGTGGT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCAGGAGTCACTGGTGTaGACAAGTACAGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVQESLV*TSTGPR
Trigger: ACGTGGGCCTGTACTTGTCCACACCAGTGACTCCTG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCCAGGGTGGGCGGCTaGAACTTGAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGPRVGG*NLRLYR
Trigger: CCTGTACAACCTCAAGTTCCAGCCGCCCACCCTGGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCCCGGAGCCGTGTACTaGGCTGCCCTCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQPGAVY*AALGGP
Trigger: CGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCCCAAAGCTGTCCTTaGAGGGCCCGGAGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPQSCP*RARSRV
Trigger: TACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCAGCAGCCGGATGGTaGCCCGGCTCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPAAGW*PGSAPQ
Trigger: TTGGGGAGCTGAGCCGGGCCACCATCCGGCTGCTGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCGCGCTGTATCCTCCTaGTCGCGCGTCGCCAACATG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGARAVSS*SRVANM
Trigger: CATGTTGGCGACGCGCGACCAGGAGGATACAGCGCG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCAGCCCGAGCGGCGCATaGCCACGCAGCTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARSPSGA*PRSSRA
Trigger: CGCCCGAGAGCTGCGTGGCCATGCGCCGCTCGGGCT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGAGCCCGAGCGGCGCATaGCCACGCAGCTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQSPSGA*PRSSRA
Trigger: CGCCCGAGAGCTGCGTGGCCATGCGCCGCTCGGGCT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCGGCCTCGGTGCCGTaGAGGATTTGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGAASVP*RICSSR
Trigger: TCTGCTGCTGCAAATCCTCCACGGCACCGAGGCCGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCGGCCTCGGTGCCGTaGAGGATTTGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAASVP*RICSSR
Trigger: TCTGCTGCTGCAAATCCTCCACGGCACCGAGGCCGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTGTGCAGCGCCGCGTTaGCGCGCATGCGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGCAAPR*RACVRP
Trigger: AGGACGCACGCATGCGCGCCAACGCGGCGCTGCACA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTTGCGCGCCAGGCCCTaGTCCGGCTGCGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGLRARP*SGCEKT
Trigger: CGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCAGGGTGGACTCCTTaGTGGCCCGCAGGACACACT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSGWTP*WPAGHT
Trigger: AGTGTGTCCTGCGGGCCACCAAGGAGTCCACCCTGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGGTGGCGACGAGGCTaGACACATTGCGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGWRRG*THCGGC
Trigger: GCATCCTCCGCAATGTGTCCAGCCTCGTCGCCACCC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCGGCGGCGCTGCCCATaGCGATCATCTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPRRRCP*RSSCAW
Trigger: CCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACGGCCGCCTGGTGCTTaGCGGGCCGATGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARPPGA*RADGPA
Trigger: TGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCGGCCGCCTGGTGCTTaGCGGGCCGATGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRPPGA*RADGPA
Trigger: TGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTGCGCACGTACAGGCTaGGCACGCAGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSCARTG*ARSCLG
Trigger: CCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCGGCTGCCTCCCCACTaGTGTCCTTCTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRLPPH*CPSLPP
Trigger: AGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCAAGGTCAAGCCGGCTaGGCCGAGGCTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRQGQAG*AEAAHT
Trigger: GGTGTGGGCAGCCTCGGCCCAGCCGGCTTGACCTTG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCTGCTTCCGGGCCCCTaGAGAGATTCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECELLPGP*RDSRPR
Trigger: GCGGGGCCTGGAATCTCTCCAGGGGCCCGGAAGCAG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCGGGGAGCCGGAATaGCTACGGGCAGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALAGEPE*LRAARW
Trigger: CCACCTCGCTGCCCGTAGCCATTCCGGCTCCCCGGC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCGCTGCAAGGTTCACTaGGGATGGAGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGRCKVH*GWSWRW
Trigger: CCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGAGTGCGCGGCGACCTaGCACCAGCGCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAECAAT*HQRGGH
Trigger: GTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGAGGTGGGGCGGCCGGTaGGTCTTTGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRWGGR*VFACPL
Trigger: CAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATCCCGGCCTCGTGGATaGACGGCCGGCGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASRPRG*TAGGSE
Trigger: CTCGGAGCCGCCGGCCGTCCATCCACGAGGCCGGGA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGGCGCCCTCCTGGATaGCGCGCCACTCCACGCTAT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRWRPPG*RATPRY
Trigger: ATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCA...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGACGAGGCCTCCCGCGTaGCAGCTGCTGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECETRPPA*QLLPGA
Trigger: TGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGT...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTCCCCGGAGCACAGCTaGCACCCCGGGCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESPEHS*HPGRGL
Trigger: AAGACCACGCCCGGGGTGCCAGCTGTGCTCCGGGGA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTCCCCGGAGCACAGCTaGCACCCCGGGCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSPEHS*HPGRGL
Trigger: AAGACCACGCCCGGGGTGCCAGCTGTGCTCCGGGGA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGCTCGGGACTTTGGCTaGAGCCGCGGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSARDFG*SRGLCQ
Trigger: CTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGAGGACTCGCTGCCGCTaGAGAGGGCTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERTRCR*RGLRPH
Trigger: GTGTGGCCTCAGCCCTCTCCAGCGGCAGCGAGTCCT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCGACCTCCTCGGTCTaGACCACGGCGTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGATSSV*TTASLV
Trigger: GACCAGCGACGCCGTGGTCCAGACCGAGGAGGTCGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGAAGGGTGCGGAGATaGGAGCCTTGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERRVRR*EPWRGW
Trigger: CCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGTGGCGGAGGCAGTaGCCGGGGCTTTCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGWRRQ*PGLSPR
Trigger: CCGCGGAGAAAGCCCCGGCCACTGCCTCCGCCACCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGGGTGGCGGAGGCAGTaGCCGGGGCTTTCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARGWRRQ*PGLSPR
Trigger: CCGCGGAGAAAGCCCCGGCCACTGCCTCCGCCACCC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRRPVSS*TSAAQR
Trigger: CCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCACCCCCACCCTTTTaGGCTCCGCCGGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPPPPF*APPERL
Trigger: CAAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGATCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTGGCCTTGCCCATGCTaGGGATGGGACGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRWPCPC*GWDGRD
Trigger: ATCCCTCCCGTCCCATCCCCAGCATGGGCAAGGCCA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGTGAGGTGTGGCTGTaGCCCCCACGGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGEVWL*PPRQGM
Trigger: CATCCCCTGCCGTGGGGGCCACAGCCACACCTCACC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTGGGCGGTGAGGTGTaGCTGTGGCCCCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLGGEV*LWPPRQ
Trigger: CTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGHVWSC*GPVAVT
Trigger: AGTGACCGCCACTGGCCCCCAACATGACCACACGTG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTGTTCAGGTCTCCAGTaGGGATCAGGCTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVCSGLQ*GSGLGL
Trigger: CAACCCCAAGCCTGATCCCCACTGGAGACCTGAACA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGAGGGGCACAGGGACTaGAAGTCAGGTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVEGHRD*KSGGRG
Trigger: GCCTCTGCCACCTGACTTCCAGTCCCTGTGCCCCTC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTCAGGGACCACCATTTaGCTGTTCCCAGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRASGTTI*LFPEGE
Trigger: TTCTCCCTCTGGGAACAGCCAAATGGTGGTCCCTGA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGGGACGCAGTGTGTaGCTTGCCATGTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGRGRSV*LAMSSG
Trigger: GCCGGATGACATGGCAAGCCACACACTGCGTCCCCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGGGCTCAGTCGCAGGTaGGAGGATGGAGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEGLSRR*EDGVGL
Trigger: CAGCCCGACTCCATCCTCCCACCTGCGACTGAGCCC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
3UTR CAA 72 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYP*AIRGAAGRGEC
Trigger: ACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCGGACAGACGGCCCCTaGCCTAAGCCCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRTDGP*PKPQPS
Trigger: GGACGGCTGGGGCTTAGGTCAGGGGCCGTCTGTCCG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGTCTGCAGACAGTTGTaGTCCCGGAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAVCRQL*SRSTCL
Trigger: CAGGCAGGTGCTCCGGGATCACAACTGTCTGCAGAC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGTCTGCAGACAGTTGTaGTCCCGGAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPVCRQL*SRSTCL
Trigger: CAGGCAGGTGCTCCGGGATCACAACTGTCTGCAGAC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCCTCAGTGGGCGTCGTaGGGCACAGCGACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALPQWAS*GTATGA
Trigger: CGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCAGCCACGTGACAATTaGATTGGCGCCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAQPRDN*IGALLD
Trigger: ATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCCCGCTGGTCTTGACTaGGGCTGCGCCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRPAGLD*GCAPFL
Trigger: GAGAAAAGGGGCGCAGCCTCAGTCAAGACCAGCGGG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTGCGGTCCTGGGCACTaGCCACGCCCACATGTGATG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRCGPGH*PRPHVM
Trigger: CATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQCSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQAVGVP*VDCPET
Trigger: GGTCTCTGGACAATCAACTCAAGGTACGCCCACTGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACAGATGGGGCCGGGTaGGGTAATGCTGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATDGAG*GNAVGA
Trigger: AGCTCCGACAGCATTACCTCACCCGGCCCCATCTGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGCGAGTCGGACAGCTaGCGGTGTCGTCCTTACGCC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGECESDS*RCRPYA
Trigger: GGCGTAAGGACGACACCGTCAGCTGTCCGACTCGCA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTTTGGGTTGCCCCTCTaGGGAACCTGCAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGFGLPL*GTCRAG
Trigger: TCCTGCCCTGCAGGTTCCTCAGAGGGGCAACCCAAA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCATCTCGTCCGAGGTaGCGAAGCGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPSRPR*RSAPPS
Trigger: TGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCCATCTCGTCCGAGGTaGCGAAGCGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPPSRPR*RSAPPS
Trigger: TGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCGGATCTGTGCCCGCTaGACCATCTCGTCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRICAR*TISSEV
Trigger: CACCTCGGACGAGATGGTGCAGCGGGCACAGATCCG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGGCCCTGGTCCGGCTaGGAGAAGACGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVRPWSG*EKTMLC
Trigger: GCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRVAWQI*GSMGIG
Trigger: CCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCAC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGAACCTGCAGCAGCTCTaGCACGGCCTGCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRNLQQL*HGLQPT
Trigger: GGTGGGCTGCAGGCCGTGGCAGAGCTGCTGCAGGTT...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCACGATGGCCTCCATaGAGCCGCGGCGCGCACACA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPRWPP*SRGAHT
Trigger: TGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCCAGGGCAGTCACGCTaGCCGCCTCCCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALPGQSR*PPPSAP
Trigger: AGGTGCTGAGGGAGGCGGGCAGCGTGACTGCCCTGG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTACAGGTTCCAGAGCGTaGCGCACGCGTTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVTGSRA*RTRCSR
Trigger: TCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCAGATTACGCAGCATaGCCACGGCGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRPDYAA*PRRPGP
Trigger: GGGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGATCTTGTGCTTGGAGTaGACCAGATTACGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTILCLE*TRLRSM
Trigger: CATGCTGCGTAATCTGGTGCACTCCAAGCACAAGAT...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCAGGGCGGCGGCGCTaGCCATGGCGATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAGRRR*PWRSSC
Trigger: ACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACTGCGCGAGGTGCCGTaGGTCCAGCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALREVP*VQLGLQ
Trigger: CTGGAGGCCGAGCTGGACGCACGGCACCTCGCGCAG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGAGGTGCTCCAGCGCCTaGGCGAGGTGCCGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRCSSA*ARCRAS
Trigger: GGACGCACGGCACCTCGCGCAGGCGCTGGAGCACCT...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCCGGCAGCCAGGCCTaGTTCCGGGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPAGSQA*FRAPGE
Trigger: CTCTCCAGGGGCCCGGAAGCAGGCCTGGCTGCCGGC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCTTCTCGGGAACCTTaGTCAGGTGGTCTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRASREP*SGGLPA
Trigger: TGCCGGCAGACCACCTGAGCAAGGTTCCCGAGAAGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTGCGCCGCCAGTTTCTaGAGTGCCTTGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVCAASF*SALLAT
Trigger: TGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCGGGCGCCCGCCACGTaGTGTCCAGCTCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPRAPAT*CPAQPR
Trigger: GCGAGGCTGAGCTGGACAGCACGTGGCGGGCGCCCG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGACGGGCTCTCGAAGCTaGCCAGCGAGCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRTGSRS*PASSQS
Trigger: GCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCTCCGCGGAGTCAGTaGAGGAGTCGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPPRSQ*RSRPPG
Trigger: CCCAGGAGGACGACTCCTGCACTGACTCCGCGGAGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCGCCTCCCGCCTTGTaGCGGTGCCCCATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQAPPAL*RCPMAC
Trigger: ACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCTCGTCCGAGTCGTTaGCGTAGAAGCAGTACACGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPRPSR*RRSSTR
Trigger: CCGTGTACTGCTTCTACGGCAACGACTCGGACGAGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGAGGGATGGCCGATGTaGGCCGGTGGGTTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPEGWPM*AGGLAW
Trigger: CCACGCCAACCCACCGGCGCACATCGGCCATCCCTC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCGGCGGGGCAGCTGGTaGAGCCTTGGACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPRRGSW*SLGRGR
Trigger: CCTGCCCCGTCCAAGGCTGCACCAGCTGCCCCGCCG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCAGCTGCTGCCTGGTaGAGCCACGTGACAATTGAA +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQAAAAW*SHVTIE
Trigger: TTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGGCTGGGCACGGGGTaGCGGGCTGGGGACGTAGAT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGLGTG*RAGDVD
Trigger: ATCTACGTCCCCAGCCCGGCACCCCGTGCCCAGCCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGATCTCTGCGTCTTGTaGTGCTTCGCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQDLCVL*CFARRV
Trigger: CACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCGTCCTCATCTCGGATaGGCCGCCAGGTCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRPHLG*AARSCP
Trigger: CGGGCACGACCTGGCGGCGCATCCGAGATGAGGACG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCGTGGCGGGAAGCGTaGTGCGCAGGATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPWREA*CAGCGA
Trigger: TGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCGAATTACCGGCGGCTaGAGTGATTACAGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQARITGG*SDYRLR
Trigger: GCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTAC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPSRPGV*TRVPSY
Trigger: GTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVAAPPS*ITLALS
Trigger: TGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGGCTGGCAGCCATGTTaGGCACCTTGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRGWQPC*APCCWA
Trigger: TGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAAGTACAGGCCCACGTaGTGGTGGCCAGGCAATCCG +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVKYRPT*WWPGNP
Trigger: CGGATTGCCTGGCCACCACCACGTGGGCCTGTACTT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCCCAGGGTGGGCGGCTaGAACTTGAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQPRVGG*NLRLYR
Trigger: CCTGTACAACCTCAAGTTCCAGCCGCCCACCCTGGG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCCCAAAGCTGTCCTTaGAGGGCCCGGAGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPQSCP*RARSRV
Trigger: TACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGAGCTCTCGGGCGAGCTaGACATGGCCAGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESSRAS*TWPAAC
Trigger: GCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCT...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCTGTCGGAGGCCAGCTaGGCCACGATGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSLSEAS*ATMASM
Trigger: CATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCACGCTCTTCAGGGTaGACTCCTTGGTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRARSSG*TPWWPA
Trigger: TGCGGGCCACCAAGGAGTCCACCCTGAAGAGCGTGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGAGGGCGCCATCCACCTaGCAGATGGCCGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRAPST*QMAALF
Trigger: GAACAAGGCGGCCATCTGCCAGGTGGATGGCGCCCT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTGCTTGGCGGGCCGATaGGCCAGCAGGTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPCLAGR*ASRLRR
Trigger: CCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGGCTGCCTCCCCACTaGTGTCCTTCTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRLPPH*CPSLPP
Trigger: AGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGAACCTTGCTCAGGTaGTCTGCCGGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWGTLLR*SAGSQA
Trigger: GGCCTGGCTGCCGGCAGACCACCTGAGCAAGGTTCC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCACGAGCTGGACGGCGTaGCGTCTTCCACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPTSWTA*RLPPPG
Trigger: GCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGT...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCGCTGCAAGGTTCACTaGGGATGGAGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGARCKVH*GWSWRW
Trigger: CCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGGTGGGGCGGCCGGTaGGTCTTTGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARWGGR*VFACPL
Trigger: CAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTGGCGCCCTCCTGGATaGCGCGCCACTCCACGCTAT +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGWRPPG*RATPRY
Trigger: ATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCACGGGGTGCCGGGCTaGGGACGTAGATCACTGTTC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEHGVPG*GRRSLF
Trigger: GAACAGTGATCTACGTCCCCAGCCCGGCACCCCGTG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGCGCGCCGGCGTTTTaGGCACCGGGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPCAPAF*APGRLR
Trigger: CCGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGGACGTGCTGGAGTTaGTCTTGGGGGCGGCGACCT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGTCWS*SWGRRP
Trigger: AGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGGACGTGCTGGAGTTaGTCTTGGGGGCGGCGACCT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGTCWS*SWGRRP
Trigger: AGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGAGCCTTGGCGAGGCTaGGACCGTCCACGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPEPWRG*DRPRRC
Trigger: GCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCGAAGGGTGCGGAGATaGGAGCCTTGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRRRVRR*EPWRGW
Trigger: CCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCTGCTTCGTTCCTCCTaGAGAAGGCACGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQLLRSS*RRHVGH
Trigger: ATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVHPWWG*GFLLSS
Trigger: GGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQHLGDL*TSCLEL
Trigger: GAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTAT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPAPAG*HTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCAGCGACCTGGTGGCTaGCTTCGCCATTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRQRPGG*LRHFPT
Trigger: GGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTCACCAGCGACCTGGTaGCTGGCTTCGCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASPATW*LASPFP
Trigger: GGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGLSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCTGCCTGTCCCCTTCTaGAGACAGCTGGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRLPVPF*RQLDWA
Trigger: CGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAGGGAGGCCTTGCAGTaGGCGTACCTTGAGTTGATT +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVREALQ*AYLELI
Trigger: AATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCAGGCAGGGGCCGCGGTaGGAGGGAGGCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRQGPR*EGGLAV
Trigger: CACTGCAAGGCCTCCCTCCCACCGCGGCCCCTGCCT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGATCAGGCTTGGGGTTaGGGGCTACACGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPDQAWG*GLHAGR
Trigger: TCTCCCTGCGTGTAGCCCCCAACCCCAAGCCTGATC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACTCCCTCTGTCCAGCTaGCCGGCGCCTCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALPLSS*PAPPPS
Trigger: CGAGGGAGGAGGCGCCGGCCAGCTGGACAGAGGGAG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCTTCTTTGTGCCTCTaGCCGTCTTCTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQASLCL*PSSGSG
Trigger: GCCAGAGCCAGAAGACGGCCAGAGGCACAAAGAAGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCACTCTGCCAGCGCGCTaGCTTCTTTGTGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPTLPAR*LLCASG
Trigger: GCCAGAGGCACAAAGAAGCCAGCGCGCTGGCAGAGT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCAGGCCCACGTGGTGGTaGCCAGGCAATCCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRPTWW*PGNPGR
Trigger: GCGCCCCGGATTGCCTGGCCACCACCACGTGGGCCT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
3UTR CAA 72 bp ACGGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTaGGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TAPRVQHPRVVM*GASGGHCPSAS
Trigger: TGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCGCCGCCGCTCTCGATaGTGGCCAGCGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPRRRSR*WPASCS
Trigger: AGAGCAACTCGCTGGCCATCATCGAGAGCGGCGGCG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGGCCGCAGCCAGGGATaGCGGTGCATCGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARGRSQG*RCIVVV
Trigger: GACGACGACGATGCACCGTCATCCCTGGCTGCGGCC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACCTCAGTGGGCGTCGTaGGGCACAGCGACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAPQWAS*GTATGA
Trigger: CGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCCTCAGTGGGCGTCGTaGGGCACAGCGACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARPQWAS*GTATGA
Trigger: CGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGTCTCGTCAGCAATaGGGCTGGGCTGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGSRQQ*GWAGSG
Trigger: CCCGGACCCAGCCCAGCCTCATTGCTGACGAGACCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGGTCTCGTCAGCAATaGGGCTGGGCTGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGSRQQ*GWAGSG
Trigger: CCCGGACCCAGCCCAGCCTCATTGCTGACGAGACCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATAGGGCTCGGGCTCGCTaGGGGAGCTGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHRARAR*GSWRRS
Trigger: GCTCCTCCGCCAGCTCCCTCAGCGAGCCCGAGCCCT...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTGGGCAGGGCCGAGCTaGTGCACCGCTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPWAGPS*CTAAEA
Trigger: AGCTTCTGCAGCGGTGCATCAGCTCGGCCCTGCCCA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCGCTGGTCTTGACTaGGGCTGCGCCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRPAGLD*GCAPFL
Trigger: GAGAAAAGGGGCGCAGCCTCAGTCAAGACCAGCGGG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGCCGCTGGAGAGGGCTaGGGCCACACGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIAAGEG*GHTHQA
Trigger: GGCCTGGTGCGTGTGGCCTCAGCCCTCTCCAGCGGC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRYRRLQ*LQASPL
Trigger: CAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTA...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGECSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGTGGGGACAGCAAGTGTaGGACCCCCGCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRWGQQV*DPRCVL
Trigger: CAGGACACAGCGGGGGTCTCACACTTGCTGTCCCCA...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGA +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGRTLS*LSRDRG
Trigger: TCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCAGCACTCGGGCCTCCTaGTCCAGTTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSTRAS*SSFPCR
Trigger: CCTACAGGGAAAACTGGAGCAGGAGGCCCGAGTGCT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTAGGGCCTTCAGCTaGTCCAGCACCTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGECRAFS*SSTSVC
Trigger: GCAGACGGAGGTGCTGGAGCAGCTGAAGGCCCTACA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGAGCCGTGTACTGGGCTaGCCTCGGGGGTCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRSRVLG*PRGSGR
Trigger: CCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCCTCGAACTCAAGCTaGTGCCGGATCAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAASNSS*CRIRSI
Trigger: GATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCGGATCTGTGCCCGCTaGACCATCTCGTCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSRICAR*TISSEV
Trigger: CACCTCGGACGAGATGGTGCAGCGGGCACAGATCCG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCGAGGCGCGGATCTGTaGCCGCTGCACCATCTCGTC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRGADL*PLHHLV
Trigger: GACGAGATGGTGCAGCGGGCACAGATCCGCGCCTCG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAGACCACCTCCACCTTaGTGTTGCCCGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWRPPPP*CCPAEG
Trigger: CCCCTCAGCCGGGCAACAGCAAGGTGGAGGTGGTCT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACATGGCCAGCAGCGTaGGCGCTGTATCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTWPAA*ALYPPG
Trigger: ACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGGCCGCGGCCTCGGTaGCGTGGAGGATTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRPRPR*RGGFAA
Trigger: TGCTGCAAATCCTCCACGGCACCGAGGCCGCGGCCG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGAGGCCCTGGTCCGGCTaGGAGAAGACGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRPWSG*EKTMLC
Trigger: GCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGATCTGCTCCAGCACGTaGAGGACGCGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQICSST*RTRISL
Trigger: CAAGGAGATGCGCGTCCTGCACGTGCTGGAGCAGAT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCGCCGTCTCGGGCCTaGAGCCAGTCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPPSRA*SQSQQV
Trigger: GACCTGCTGGGACTGGCTGCAGGCCCGAGACGGCGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTAGCTCTGCCACGGCCTaGAGCCCACCTAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSSATA*SPPSSF
Trigger: GAACGAGCTAGGTGGGCTGCAGGCCGTGGCAGAGCT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer