RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000115266

Ensembl transcript IDs: ENST00000233607.6, ENST00000238483.5, ENST00000535453.5, ENST00000587149.6, ENST00000587869.5, ENST00000590469.6, ENST00000590877.5, ENST00000593146.1

Found 1889 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCGTTTCCTCCTGGACCTCCGCGGCAC +
Preference number: 1 (lower is better)
Translates to: RAGPGRPCQRSTVGT*GLAAAPFPPGPPRH
Trigger: GTGCCGCGGAGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp AGCCGGCCCGGCGTCTGCACCAGGGTCCCATCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGGGGATCC +
Preference number: 1 (lower is better)
Translates to: SRPGVCTRVPSYAAR*LPVSRQGVRQAGGS
Trigger: GGATCCCCCTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp GGGAGAGGCCAGCGCGGGCTCCAGGTCCCAGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCTCCTTTCCATTGGCCTCGCCCGCCG +
Preference number: 1 (lower is better)
Translates to: GRGQRGLQVPGPRAH*RDSPQSPFHWPRPP
Trigger: CGGCGGGCGAGGCCAATGGAAAGGAGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCCTGGGACCTGGAGCCCGCGCTGGCCTCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCCAG +
Preference number: 1 (lower is better)
Translates to: EALGRPMGDVYSAGP*GSQTAPQGRERTFQ
Trigger: CTGGAACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GGGCCTCGGGCTCACTGCCGGGACTCCCCTCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATACTGACTCCAGC +
Preference number: 1 (lower is better)
Translates to: GPRAHCRDSPQSPFH*PRPPRLRRADTDSS
Trigger: GCTGGAGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GGCGCGCGCCATCAGGGCTGGACCGGGGCAACAGATGGGGCCGGGTaGGGTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCAC +
Preference number: 1 (lower is better)
Translates to: GARHQGWTGATDGAG*GNAVGAREDHAGGH
Trigger: GTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GTCAAGCAACGGCTTCCGACAGGGGAAGGGCCGCGCGCTCAGGGCTaGGCCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTTGAGG +
Preference number: 1 (lower is better)
Translates to: VKQRLPTGEGPRAQG*ARTPLPALHGRDLR
Trigger: CCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCCCTGTCGGAAGCCGTTGCTTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp TCCTTTCCATTGGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGGTCGCCCCAGCTGGTAGCCAGCATC +
Preference number: 1 (lower is better)
Translates to: SFPLASPAAAAPGRY*LQRPLGSPQLVASI
Trigger: GATGCTGGCTACCAGCTGGGGCGACCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CTCCACGGTCGGGACTTGAGGCCTAGCGGCCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGAG +
Preference number: 1 (lower is better)
Translates to: LHGRDLRPSGRPVSS*TSAAQRQGLPVRRE
Trigger: CTCGCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GGGGGTGGGAGGCGGGGCTGGCAGCCATGTTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGT +
Preference number: 1 (lower is better)
Translates to: GGGRRGWQPCCAPCC*ARRHGQEPARPKFC
Trigger: ACAGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCCCCGCCTCCCACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp GCATCTCCTCTGGGATGGGGTCCAAATGTCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTACGCAGCCCGCTGCCTTCCCGTCTCC +
Preference number: 1 (lower is better)
Translates to: ASPLGWGPNVSRPGV*TRVPSYAARCLPVS
Trigger: GGAGACGGGAAGGCAGCGGGCTGCGTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CGGTGGGCACGGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCAGGACACCTCC +
Preference number: 1 (lower is better)
Translates to: RWARRPEFSTHVWSC*GPVAVTVHQPQDTS
Trigger: GGAGGTGTCCTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCGTGCCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GGACCATGCCGGTGGGCACGGCGCCCCGAGTTCAGCACCCACGTGTaGTCATGTTGGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCAG +
Preference number: 1 (lower is better)
Translates to: GPCRWARRPEFSTHV*SCWGPVAVTVHQPQ
Trigger: CTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCGTGCCCACCGGCATGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp CTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCC +
Preference number: 1 (lower is better)
Translates to: LGKASRAGASQTQVL*ASRRLPIIAATTLP
Trigger: GGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp GGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTTGGGGGCCAGTaGCGGTCACTGTCCATCAGCCTCAGGACACCTCCACCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: GAPSSAPTCGHVGGQ*RSLSISLRTPPPSL
Trigger: CAGGGAGGGTGGAGGTGTCCTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GGGGCCGCGGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAG +
Preference number: 1 (lower is better)
Translates to: GAAVGGRPCSGRTLS*LSRDRGLPVPFWRQ
Trigger: CTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACCGCGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp AGGCAGGGGCCGCGGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACCGCGGACTGCCTGTCCCCTTCTGGA +
Preference number: 1 (lower is better)
Translates to: RQGPRWEGGLAVGVP*VDCPETADCLSPSG
Trigger: TCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACCGCGGCCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp TGTCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGTGAGC +
Preference number: 1 (lower is better)
Translates to: CHQRPGGWLRHFPTL*QLGAQRAGASVRVS
Trigger: GCTCACCCTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCC +
Preference number: 1 (lower is better)
Translates to: LRPQTLSSLGLALEH*GADEDPLSPWCREA
Trigger: GGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp TTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCTCCCGCCTTGTCCCAGAGCCTCGGG +
Preference number: 1 (lower is better)
Translates to: FHLIWHQILSSPAFT*RKAPEPPALSQSLG
Trigger: CCCGAGGCTCTGGGACAAGGCGGGAGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp ACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: TIPAKPSLANYRRLQ*LQASPLRAAKAPSW
Trigger: CCAGCTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CACCCAACCCTCAAACCCTGCTTCGTTCCTCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCTTCAGCCTGGGCAGATCCGTGGGTG +
Preference number: 1 (lower is better)
Translates to: HPTLKPCFVPPGEGT*GIERVPSAWADPWV
Trigger: CACCCACGGATCTGCCCAGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp ATGCTGGGGATGGGACGGGAGGGATGGTGTCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCCATCCACCCAACCCTCAAACCCTGC +
Preference number: 1 (lower is better)
Translates to: MLGMGREGWCHPWWG*GFLLSSIHPTLKPC
Trigger: GCAGGGTTTGAGGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATGACACCATCCCTCCCGTCCCATCCCCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CGAGGTCCTAGGAGGGAGCATTGGGCACCTCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTATGGACGTCCTGTCTGGAGCTCCTTG +
Preference number: 1 (lower is better)
Translates to: RGPRREHWAPPAPAG*HTSVTYGRPVWSSL
Trigger: CAAGGAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGGACCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp CAACCTGACAGCCTTGCCTGGCTGCGAGGTCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCTGGGTGGCACACCTCGGTGACTTAT +
Preference number: 1 (lower is better)
Translates to: QPDSLAWLRGPRREH*APPAPAGWHTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp ACACGTCCGTTTAACACTGCAGAGACCCGGTACAGAAACGTGGGGTaGCGGCTAGGGGAATCAGACAGACCAGGCGCGCGCCATCAGGGC +
Preference number: 1 (lower is better)
Translates to: TRPFNTAETRYRNVG*RLGESDRPGARHQG
Trigger: GCCCTGATGGCGCGCGCCTGGTCTGTCTGATTCCCCTAGCCGCCACCCCACGTTTCTGTACCGGGTCTCTGCAGTGTTAAACGGACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GACGGGAGGGATGGTGTCATCCGTGGTGGGGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCCTCAAACCCTGCTTCGTTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: DGRDGVIRGGAGVSF*APSTQPSNPASFLL
Trigger: CAGGAGGAACGAAGCAGGGTTTGAGGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATGACACCATCCCTCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GGAATTGAAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTaGCCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGC +
Preference number: 1 (lower is better)
Translates to: GIEKGQDEQRCGPGH*PRPHVMVSVTCRLR
Trigger: GCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTTCAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp GGCTGGGGTTTCCTTCTGAGCTCCATCCACCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAAGGCACGTGGGGCATTGAGCGTGTG +
Preference number: 1 (lower is better)
Translates to: GWGFLLSSIHPTLKP*FVPPGEGTWGIERV
Trigger: CACACGCTCAATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp GCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCACCAGCGACCTGGTGGCTGGCTTCG +
Preference number: 1 (lower is better)
Translates to: AQRLTYVEGNAAPPS*ITLALSPATWWLAS
Trigger: CGAAGCCAGCCACCAGGTCGCTGGTGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 90 bp AGGCAGCCGAGCCCCTCAGGCCCTTCTATAAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGAAGGCC +
Preference number: 1 (lower is better)
Translates to: RQPSPSGPSISFHLI*HQILSSPAFTCRKA
Trigger: GGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTTATAGAAGGGCCTGAGGGGCTCGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp TTCTATAAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGCCCCCGAACCTCCCGCCTTGTCCCA +
Preference number: 1 (lower is better)
Translates to: FYKLSPHLAPNTLQP*VHLPEGPRTSRLVP
Trigger: TGGGACAAGGCGGGAGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTTATAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 90 bp CCCACCCGCACTCCCACAGCTGGGGCTGAGAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACA +
Preference number: 1 (lower is better)
Translates to: PTRTPTAGAENENNP*KALISELPAAAVIT
Trigger: TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATTCTCAGCCCCAGCTGTGGGAGTGCGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 90 bp GCAATGCAAGAGCTCAGTTTATTAAATGTGTGCGAGTCGGACAGCTaGCGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTAGGG +
Preference number: 1 (lower is better)
Translates to: AMQELSLLNVCESDS*RCRPYAGQMALHLG
Trigger: CCCTAAATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGCACACATTTAATAAACTGAGCTCTTGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp CCGACAGGGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGGGACTTGAGGCCTAGCGGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: PTGEGPRAQGWARTP*PALHGRDLRPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCCCTGTCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCGCGCGCTCAGGGCTaGGCCAGGACGCCCTTGCCA +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPRAQG*ARTPLP
Trigger: TGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTAC +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPSRPGV*TRVPSY
Trigger: GTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp CAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCCGTTTCCTCCTGGACCTCCGCGGCA +
Preference number: 2 (lower is better)
Translates to: QGWARTPLPALHGRD*RPSGRPVSSWTSAA
Trigger: TGCCGCGGAGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 2 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 2 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVGLRVP*TPSGRG
Trigger: GCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVTCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWGLRVP*TPSGRG
Trigger: GCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 2 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp CCGGTGGGCACGGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTaGGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCAGGACACCTC +
Preference number: 2 (lower is better)
Translates to: PVGTAPRVQHPRVVM*GASGGHCPSASGHL
Trigger: GAGGTGTCCTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCGTGCCCACCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCAGAGACCGCGGACTaGCTGTCCCCTTCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGPETAD*LSPSGD
Trigger: GTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRPVSS*TSAAQR
Trigger: CCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGALSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRLKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCTGGGCGGTGAGGTGTaGCTGTGGCCCCCACGGCAG +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWLGGEV*LWPPRQ
Trigger: CTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGGCAGATCCGTGGGTaGAGGCAGCGCCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGQIRG*RQRLLE
Trigger: CTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGCSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCCCAGCGCTGTCCCTaGGAAGCAGCGGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPQRCP*EAADPD
Trigger: GTCTGGGTCCGCTGCTTCGCAGGGACAGCGCTGGGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGGCACCTCCAGCACCTaGTGGGTGGCACACCTCGGT +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRGTSST*WVAHLG
Trigger: ACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGSPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGRVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTGGCCTTGCCCATGCTaGGGATGGGACGGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPWPCPC*GWDGRD
Trigger: ATCCCTCCCGTCCCATCCCCAGCATGGGCAAGGCCA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCACCAGCGACCTGGTaGCTGGCTTCGCCATTTCCC +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGSPATW*LASPFP
Trigger: GGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp CTGTCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: LSPATWWLASPFPYP*AIRGAAGRGECEGE
Trigger: CTCACCCTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGCAGATCCGTGGGTaGAGGCAGCGCCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGQIRG*RQRLLE
Trigger: CTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVAGVSF*APSTQP
Trigger: GGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGACSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAQTQVL*ASRRLP
Trigger: GGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGCACCTCCAGCACCTaGTGGGTGGCACACCTCGGT +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWGTSST*WVAHLG
Trigger: ACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPAAPPS*ITLALS
Trigger: TGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCACCCCCACCCTTTTaGGCTCCGCCGGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPPPPF*APPERL
Trigger: CAAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCTGCTTCGTTCCTCCTaGAGAAGGCACGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGLLRSS*RRHVGH
Trigger: ATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAHPWWG*GFLLSS
Trigger: GGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 2 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGETSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 2 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGACAGAGGCAGGGAGCTaGGAGGGCGCCGCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALTEAGS*EGAAQR
Trigger: TCTCTGGGCGGCGCCCTCCCAGCTCCCTGCCTCTGT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp GGGTGGCACACCTCGGTGACTTATGGACGTCCTGTCTGGAGCTCCTaGTCCTGCAGGGTGTGGGCCCGGAGCATGGGGTGCAGCGTGACA +
Preference number: 2 (lower is better)
Translates to: GWHTSVTYGRPVWSS*SCRVWARSMGCSVT
Trigger: TGTCACGCTGCACCCCATGCTCCGGGCCCACACCCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTGTGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 90 bp AGGGGCCGCGGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTGAGTaGATTGTCCAGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACA +
Preference number: 2 (lower is better)
Translates to: RGRGGREALQWAYLE*IVQRPRTACPLLET
Trigger: TGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACCGCGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRSTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEYRRLQ*LQASPL
Trigger: CAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGATPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGA +
Preference number: 2 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQGRTLS*LSRDRG
Trigger: TCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPNTLQP*VHLPEG
Trigger: GCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRAAPPS*ITLALS
Trigger: TGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: LISELPAAAVITGFAPARRPVSS*TSAAQR
Trigger: CCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCTGCTTCGTTCCTCCTaGAGAAGGCACGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPLLRSS*RRHVGH
Trigger: ATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTTCTGCCAGAAAGGCTaGCCTTGCCCATGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAFCQKG*PCPCWG
Trigger: TCCCCAGCATGGGCAAGGCCAGCCTTTCTGGCAGAA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSTSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCT +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPRREH*APPAPA
Trigger: AGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSCSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWSPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCCCAGCGCTGTCCCTaGGAAGCAGCGGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPQRCP*EAADPD
Trigger: GTCTGGGTCCGCTGCTTCGCAGGGACAGCGCTGGGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCGAATTACCGGCGGCTaGAGTGATTACAGGCTTCGC +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGRITGG*SDYRLR
Trigger: GCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGAGGACAGCTCCTTCTaGCAGAAAGGCTGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEEDSSF*QKGWPC
Trigger: GCAAGGCCAGCCTTTCTGGCAGAAGGAGCTGTCCTC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPGEGT*GIERVP
Trigger: AGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPLKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGG +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAHFPTL*QLGAQR
Trigger: CCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTGGAGACAGCTGGACTaGGCGGTGAGGTGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWWRQLD*AVRCGC
Trigger: ACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCA...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALTAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: AVAPTAGDGEGESELRTRAWGAA*HAFREA
Trigger: TGCTTCTCTGAATGCATGTCACGCTGCACCCCATGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGTGGCACACCTCGGTaGCTTATGGACGTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGGTPR*LMDVLS
Trigger: AGACAGGACGTCCATAAGTCACCGAGGTGTGCCACC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPSPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGAATTACCGGCGGCTaGAGTGATTACAGGCTTCGC +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRITGG*SDYRLR
Trigger: GCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTAC +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYISRPGV*TRVPSY
Trigger: GTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGATTTTCCCCGCTCTCTaGTCAGCCATCCATGACCCC +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRIFPAL*SAIHDP
Trigger: GGGGTCATGGATGGCTGAGCAGAGAGCGGGGAAAAT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCATATGTGGAAGGCAATaGCGCACCACCTTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: GADEDPLSPWCREARWPGICGRQ*RTTFLH
Trigger: ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATAT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATGGCCTTGCCCATGCTaGGGATGGGACGGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAWPCPC*GWDGRD
Trigger: ATCCCTCCCGTCCCATCCCCAGCATGGGCAAGGCCA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTTCTGCCAGAAAGGCTaGCCTTGCCCATGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWFCQKG*PCPCWG
Trigger: TCCCCAGCATGGGCAAGGCCAGCCTTTCTGGCAGAA...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTTCTGCCAGAAAGGCTaGCCTTGCCCATGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEFCQKG*PCPCWG
Trigger: TCCCCAGCATGGGCAAGGCCAGCCTTTCTGGCAGAA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPLSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTAT +
Preference number: 2 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPAPAG*HTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQTSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHLKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPTPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYICRTRR*PSHGDP
Trigger: CGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCACCTCCAGCACCTaGTGGGTGGCACACCTCGGT +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRGTSST*WVAHLG
Trigger: ACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCCACCCCCACCCTTTTaGGCTCCGCCGGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPPPPPF*APPERL
Trigger: CAAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCTCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPSQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQHPWWG*GFLLSS
Trigger: GGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGATGGTGTCATCCGTaGTGGGGCTGGGGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGWCHP*WGWGFL
Trigger: AAGGAAACCCCAGCCCCACCACGGATGACACCATCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGCCCATGCTGGGGATaGGACGGGAGGGATGGTGTC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPCPCWG*DGRDGV
Trigger: GACACCATCCCTCCCGTCCCATCCCCAGCATGGGCA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACC +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALAVGVP*VDCPET
Trigger: GGTCTCTGGACAATCAACTCAAGGTACGCCCACTGC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGATATGTGGAAGGCAATaGCGCACCACCTTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRICGRQ*RTTFLH
Trigger: ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATAT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 2 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAWCHPW*GWGFLL
Trigger: CAGAAGGAAACCCCAGCCCCACCACGGATGACACCA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: TLPASSDPQLLRTGPGALYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACCAGCACCTGCTGGGTaGCACACCTCGGTGACTTAT +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAPAPAG*HTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGAGACTTACATATGTaGAAGGCAATGCCGCACCAC +
Preference number: 2 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVRDLHM*KAMPHH
Trigger: GTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 2 (lower is better)
Translates to: NNPCKALISELPAAAVITGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SPATWWLASPFPYPLAIRTAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 2 (lower is better)
Translates to: RRPETYICGRQCRTTFLHARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACATACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 2 (lower is better)
Translates to: NNPCKALISELPAAAVITYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPWCHPW*GWGFLL
Trigger: CAGAAGGAAACCCCAGCCCCACCACGGATGACACCA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAHLGDL*TSCLEL
Trigger: GAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCAGCGACCTGGTGGCTaGCTTCGCCATTTCCCTACC +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIQRPGG*LRHFPT
Trigger: GGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCGCTTTATGCATCATaGACCAGAAGGGAATTGAAA +
Preference number: 2 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGALYAS*TRRELK
Trigger: TTTCAATTCCCTTCTGGTTCATGATGCATAAAGCGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCC +
Preference number: 2 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPAGVSF*APSTQP
Trigger: GGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSFHLI*HQILSS
Trigger: GCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPHLGDL*TSCLEL
Trigger: GAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGG +
Preference number: 2 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPHFPTL*QLGAQR
Trigger: CCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYILSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTTCAGCACCCACGTGTaGTCATGTTGGGGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIFSTHV*SCWGPV
Trigger: CACTGGCCCCCAACATGACCACACGTGGGTGCTGAA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 2 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPNENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 2 (lower is better)
Translates to: LAAMLRTLLLGKASRAGANENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTCCCCGCCCCAGCTGTaGTGTTTCTGGAGTTCTAGG +
Preference number: 2 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPSPPQL*CFWSSR
Trigger: CCTAGAACTCCAGAAACAGCACAGCTGGGGCGGGGA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTASTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFRPVSS*TSAAQR
Trigger: CCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGAAGGCAGCGCCTGCTaGAGCTTTTCTGCAGAAAAG +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIEGSAC*SFSAEK
Trigger: CTTTTCTGCAGAAAAGCTCCAGCAGGCGCTGCCTTC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTTCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAA +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSYAAR*LPVSRQ
Trigger: TTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGA...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTATPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTALALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGCGCGCCATCAGGGCTaGACCGGGGCAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAARHQG*TGATDG
Trigger: CCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCC +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFAGVSF*APSTQP
Trigger: GGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCT +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTASPAFT*RKAPEP
Trigger: AGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRSPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGTGGGAGGGAGGCCTTaGAGTGGGCGTACCTTGAGT +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFVGGRP*SGRTLS
Trigger: ACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCT +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRPRREH*APPAPA
Trigger: AGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCAGCGACCTGGTGGCTaGCTTCGCCATTTCCCTACC +
Preference number: 2 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRQRPGG*LRHFPT
Trigger: GGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATGCGGTCCTGGGCACTaGCCACGCCCACATGTGATG +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTACGPGH*PRPHVM
Trigger: CATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGGTGGCACACCTCGGTaGCTTATGGACGTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFGGTPR*LMDVLS
Trigger: AGACAGGACGTCCATAAGTCACCGAGGTGTGCCACC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCTGCTGGAGCTTTTCTaGAGAAAAGAGGTCGTCGGC +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFLLELF*RKEVVG
Trigger: GCCGACGACCTCTTTTCTGCAGAAAAGCTCCAGCAG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCCATGTTGCGCACCTTaGTGCTGGGCAAGGCGTCAC +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTPCCAP*CWARRH
Trigger: GTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGTGGGAGGGAGGCCTTaGAGTGGGCGTACCTTGAGT +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTVGGRP*SGRTLS
Trigger: ACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGGGTGCAGCGTGACATaGATTCAGAGAAGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAGCSVT*IQRSSS
Trigger: ACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTLSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR TCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTAWGAA*HAFREA
Trigger: TGCTTCTCTGAATGCATGTCACGCTGCACCCCATGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 2 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFNENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGGAGCGCTTGGGCTCCGGGTTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGGGCTCGGCCACACCCC +
Preference number: 3 (lower is better)
Translates to: RSAWAPGSLNTV*AGLPAGARPHP
Trigger: GGGGTGTGGCCGAGCCCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCCAAGCGCTCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGCGCTGGGCGGGGGTTC +
Preference number: 3 (lower is better)
Translates to: PGPPRHRGKVFR*GARSPCAGRGF
Trigger: GAACCCCCGCCCAGCGCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp TTGGGCTCCGCCGGAGCGCTTGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGCTTCCTGCCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: LGSAGALGLRVP*TPSGRGFLPGL
Trigger: GAGCCCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCCAAGCGCTCCGGCGGAGCCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp TTGGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGGTCGCCCCAGCTGGTA +
Preference number: 3 (lower is better)
Translates to: LASPAAAAPGRY*LQRPLGSPQLV
Trigger: TACCAGCTGGGGCGACCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp GGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: GRPMGDVYSAGP*GSQTAPQGRER
Trigger: TCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CAAGGTCTTCCGGTGAGGCGCGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTGGTGGGGCTCGGGTGG +
Preference number: 3 (lower is better)
Translates to: QGLPVRREVAVR*AGVLRVVGLGW
Trigger: CCACCCGAGCCCCACCACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTCGCGCCTCACCGGAAGACCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCC +
Preference number: 3 (lower is better)
Translates to: LAAMLRTLLLGKASRAGALHGRD*RPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCGTTTCCTCCTGGACCT +
Preference number: 3 (lower is better)
Translates to: PGRPCQRSTVGT*GLAAAPFPPGP
Trigger: AGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp ATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCAGCTGGCAGGCCCGCC +
Preference number: 3 (lower is better)
Translates to: ITGGCSDYRLRP*APQRPPAGRPA
Trigger: GGCGGGCCTGCCAGCTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp GGCGTCTGCACCAGGGTCCCATCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCA +
Preference number: 3 (lower is better)
Translates to: GVCTRVPSYAAR*LPVSRQGVRQA
Trigger: TGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATGGGACCCTGGTGCAGACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp GCTCACTGCCGGGACTCCCCTCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATACT +
Preference number: 3 (lower is better)
Translates to: AHCRDSPQSPFH*PRPPRLRRADT
Trigger: AGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGAGGGGAGTCCCGGCAGTGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTaGGCGGTGAGGTGTGGCTGTGGCCCCCACGGCAGG +
Preference number: 3 (lower is better)
Translates to: RGLPVPFWRQLD*AVRCGCGPHGR
Trigger: CCTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGGGCTGGCAGCCATGTaGCGCACCTTGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: GADEDPLSPWCREARWPGGLAAM*RTLLLG
Trigger: GCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCCC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCC +
Preference number: 3 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSLHGRD*RPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGG +
Preference number: 3 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSWARTP*PALHGR
Trigger: CCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCCACCCCCACCCTTTaGGGCTCCGCCGGAGCGCTT +
Preference number: 3 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPTPTL*GSAGAL
Trigger: AAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp CTCAGTCTCCTTTCCATTGGCCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACTCCAGCGACCCTTGGG +
Preference number: 3 (lower is better)
Translates to: LSLLSIGLARRG*AGPILTPATLG
Trigger: CCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp AAAGAGGTCGTCGGCTCCCTCTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCGGCCCCTGCGAGTCCC +
Preference number: 3 (lower is better)
Translates to: KEVVGSLCRTRR*PSHGDPAPASP
Trigger: GGGACTCGCAGGGGCCGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGACCTCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGGGACTTGAGGCCTAGCGGCCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTG +
Preference number: 3 (lower is better)
Translates to: RDLRPSGRPVSS*TSAAQRQGLPV
Trigger: CACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGCTCCAGGTCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: PHVMVSVTCRLR*GEASAGSRSQG
Trigger: GCCCTGGGACCTGGAGCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCTCCGCCGGAGCGCTaGGGCTCCGGGTTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAPPER*GSGFPE
Trigger: TTCAGGGAACCCGGAGCCCAAGCGCTCCGGCGGAGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCT +
Preference number: 3 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSVSFP*ASPAAA
Trigger: AGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCTGCAGGACGAGGCGTaGCCCCAGTCACGGAGACCC +
Preference number: 3 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRLQDEA*PQSRRP
Trigger: GGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp CTGGGATGGGGTCCAAATGTCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTACGCAGCCCGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LGWGPNVSRPGV*TRVPSYAARCL
Trigger: AAGGCAGCGGGCTGCGTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCTGACATTTGGACCCCATCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCAGACGAGGACCCCTaGTCACCCTGGTGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVADEDP*SPWCRE
Trigger: CTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CATCAGGGCTGGACCGGGGCAACAGATGGGGCCGGGTaGGGTAATGCTGTCGGAGCTCGGGAGGACCATGCC +
Preference number: 3 (lower is better)
Translates to: HQGWTGATDGAG*GNAVGAREDHA
Trigger: GGCATGGTCCTCCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGCCCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp AGCCTTGCCTGGCTGCGAGGTCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCTGGGTGGCACACCTCG +
Preference number: 3 (lower is better)
Translates to: SLAWLRGPRREH*APPAPAGWHTS
Trigger: CGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGGACCTCGCAGCCAGGCAAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTG +
Preference number: 3 (lower is better)
Translates to: RPGGWLRHFPTL*QLGAQRAGASV
Trigger: CACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CGGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: RRPEFSTHVWSC*GPVAVTVHQPQ
Trigger: CTGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGGCAGGGGGATCCGTaGGCCTCTGCCCCTCCCACC +
Preference number: 3 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARQGDP*ASAPPT
Trigger: GGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCT +
Preference number: 3 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSVSFP*ASPAAA
Trigger: AGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCTGCAGGACGAGGCGTaGCCCCAGTCACGGAGACCC +
Preference number: 3 (lower is better)
Translates to: TLPASSDPQLLRTGPGALLQDEA*PQSRRP
Trigger: GGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCCAGAAAGGCTGGCCTaGCCCATGCTGGGGATGGGA +
Preference number: 3 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEPERLA*PMLGMG
Trigger: TCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTGG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGTGGGAGGGAGGCCTaGCAGTGGGCGTACCTTGAG +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWGGREA*QWAYLE
Trigger: CTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCCATCATCGCTGCCACC +
Preference number: 3 (lower is better)
Translates to: ASRAGASQTQVL*ASRRLPIIAAT
Trigger: GGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CCGCGGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACCGCGGACTGCCTGTCC +
Preference number: 3 (lower is better)
Translates to: PRWEGGLAVGVP*VDCPETADCLS
Trigger: GGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACCGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp GAAGGCACGTGGGGCATTGAGCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAGGCAGCGCCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: EGTWGIERVPSA*ADPWVKAAPAG
Trigger: TCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCCAGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCCTTGTCACCCTGGTGC +
Preference number: 3 (lower is better)
Translates to: QTLSSLGLALEH*GADEDPLSPWC
Trigger: GCACCAGGGTGACAAGGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGG +
Preference number: 3 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIWARTP*PALHGR
Trigger: CCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCCACCCCCACCCTTTaGGGCTCCGCCGGAGCGCTT +
Preference number: 3 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPTPTL*GSAGAL
Trigger: AAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGAAGGCACGTGGGGCATaGAGCGTGTGCCTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRKARGA*SVCLQP
Trigger: AGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAACAACCTGACAGCCTaGCCTGGCTGCGAGGTCCTA +
Preference number: 3 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQNNLTA*PGCEVL
Trigger: TAGGACCTCGCAGCCAGGCAAGGCTGTCAGGTTGTT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCCATGTTGCGCACCTaGCTGCTGGGCAAGGCGTCA +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAMLRT*LLGKAS
Trigger: TGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGTGGGAGGGAGGCCTaGCAGTGGGCGTACCTTGAG +
Preference number: 3 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGGREA*QWAYLE
Trigger: CTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GGTGGGGGCTGGGGTCAGCTTTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTCTGCCAGAAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: GGGWGQLCSQRP*VEDSSFCQKGW
Trigger: CCAGCCTTTCTGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCAAAGCTGACCCCAGCCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp ATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCTCCCGCCTTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: IWHQILSSPAFT*RKAPEPPALSQ
Trigger: CTGGGACAAGGCGGGAGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CTGGGGATGGGACGGGAGGGATGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTGAGCTCCATCCACCCA +
Preference number: 3 (lower is better)
Translates to: LGMGREGWCHPW*GWGFLLSSIHP
Trigger: TGGGTGGATGGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATGACACCATCCCTCCCGTCCCATCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCT +
Preference number: 3 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSVSFP*ASPAAA
Trigger: AGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAAGGCACGTGGGGCATaGAGCGTGTGCCTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWKARGA*SVCLQP
Trigger: AGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCG +
Preference number: 3 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPFPYP*AIRGAA
Trigger: CGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCG +
Preference number: 3 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPFPYP*AIRGAA
Trigger: CGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: AKPSLANYRRLQ*LQASPLRAAKA
Trigger: GGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGACTGCCTGTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: VGGRPCSGRTLS*LSRDRGLPVPF
Trigger: GAAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp CTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGCCCCCGAACCTCCCGC +
Preference number: 3 (lower is better)
Translates to: LSPHLAPNTLQP*VHLPEGPRTSR
Trigger: GCGGGAGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp AGCCTGGGCAGATCCGTGGGTGAAGGCAGCGCCTGCTaGAGCTTTTCTGCAGAAAAGAGGTCGTCGGCTCCC +
Preference number: 3 (lower is better)
Translates to: SLGRSVGEGSAC*SFSAEKRSSAP
Trigger: GGGAGCCGACGACCTCTTTTCTGCAGAAAAGCTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp AGGAGGGAGCATTGGGCACCTCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTATGGACGTCCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: RREHWAPPAPAG*HTSVTYGRPVW
Trigger: CCAGACAGGACGTCCATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCAGAAAGGCTGGCCTaGCCCATGCTGGGGATGGGA +
Preference number: 3 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPERLA*PMLGMG
Trigger: TCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp AAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTaGCCACGCCCACATGTGATGGTCTCCGTAACGTGC +
Preference number: 3 (lower is better)
Translates to: KGQDEQRCGPGH*PRPHVMVSVTC
Trigger: GCACGTTACGGAGACCATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp CCTGCAGGGTGTGGGCCCGGAGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCAGCAGTGTTAACTGGG +
Preference number: 3 (lower is better)
Translates to: PAGCGPGAWGAA*HAFREAAVLTG
Trigger: CCCAGTTAACACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCCCATGCTCCGGGCCCACACCCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp AGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGAGGTAGCTCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: SSVSFQASPHHR*HHAPPRGSSGS
Trigger: ACTCCCAGAGCTACCTCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp TCCAGCACCTGCTGGGTGGCACACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTCCTTGTCCTGCAGGGT +
Preference number: 3 (lower is better)
Translates to: SSTCWVAHLGDL*TSCLELLVLQG
Trigger: ACCCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp TTTAACACTGCAGAGACCCGGTACAGAAACGTGGGGTaGCGGCTAGGGGAATCAGACAGACCAGGCGCGCGC +
Preference number: 3 (lower is better)
Translates to: FNTAETRYRNVG*RLGESDRPGAR
Trigger: GCGCGCGCCTGGTCTGTCTGATTCCCCTAGCCGCCACCCCACGTTTCTGTACCGGGTCTCTGCAGTGTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCC +
Preference number: 3 (lower is better)
Translates to: NNPCKALISELPAAAVITLHGRD*RPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR GCA 72 bp TCCTTGTCCTGCAGGGTGTGGGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAGAGAAGCAGCAGTGTT +
Preference number: 3 (lower is better)
Translates to: SLSCRVWARSMG*SVTCIQRSSSV
Trigger: AACACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCCCATGCTCCGGGCCCACACCCTGCAGGACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp CTCAAACCCTGCTTCGTTCCTCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCTTCAGCCTGGGCAGAT +
Preference number: 3 (lower is better)
Translates to: LKPCFVPPGEGT*GIERVPSAWAD
Trigger: ATCTGCCCAGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAGGGTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCG +
Preference number: 3 (lower is better)
Translates to: RRPETYICGRQCRTTFLHPFPYP*AIRGAA
Trigger: CGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CCA 72 bp AGCCCCTCAGGCCCTTCTATAAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGCCCTGCGTTCACCTGC +
Preference number: 3 (lower is better)
Translates to: SPSGPSISFHLI*HQILSSPAFTC
Trigger: GCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTTATAGAAGGGCCTGAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGCCATGTTGCGCACCTaGCTGCTGGGCAAGGCGTCA +
Preference number: 3 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFAMLRT*LLGKAS
Trigger: TGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGCCATGTTGCGCACCTaGCTGCTGGGCAAGGCGTCA +
Preference number: 3 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRAMLRT*LLGKAS
Trigger: TGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACCAGAAAGGCTGGCCTaGCCCATGCTGGGGATGGGA +
Preference number: 3 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAPERLA*PMLGMG
Trigger: TCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTGG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR TCA 72 bp GAGCTCAGTTTATTAAATGTGTGCGAGTCGGACAGCTaGCGGTGTCGTCCTTACGCCGGACAGATGGCTTTA +
Preference number: 3 (lower is better)
Translates to: ELSLLNVCESDS*RCRPYAGQMAL
Trigger: TAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGCACACATTTAATAAACTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGAGGGTGAGCACGTGTTaGGCATCCCCAAGTCCAAAA +
Preference number: 3 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRRVSTC*ASPSPK
Trigger: TTTTGGACTTGGGGATGCCAAACACGTGCTCACCCT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGAACAACCTGACAGCCTaGCCTGGCTGCGAGGTCCTA +
Preference number: 3 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTNNLTA*PGCEVL
Trigger: TAGGACCTCGCAGCCAGGCAAGGCTGTCAGGTTGTT...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGGCCGGCCTCTGCATaGACGGGATCCGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGPASA*TGSARA
Trigger: CGCCCGTGCGGATCCCGTTCATGCAGAGGCCGGCCC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCGACGCGTAGCGCTTaGCAGTCTCCGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTATRSA*QSPAGR
Trigger: CCGCCCGGCCGGAGACTGTCAAGCGCTACGCGTCGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPSTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGGGCGCCCGCCACGTaGTGTCCAGCTCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRAPAT*CPAQPR
Trigger: GCGAGGCTGAGCTGGACAGCACGTGGCGGGCGCCCG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCAGGCTCCGCGACCGCTaGTGCCCGGGGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRLRDR*CPGLGT
Trigger: AGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGGGCCCTGCCGGGGTaGCGCTCGGAGCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRALPG*RSELFA
Trigger: TGCGAAGAGCTCCGAGCGGCACCCCGGCAGGGCCCG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGGTCCGGCCGGGCTTTaGGCCGTCCTTGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPGPAGL*AVLVCG
Trigger: CCCGCAGACAAGGACGGCTCAAAGCCCGGCCGGACC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCTGCGCGAGGTGCCGTaGGTCCAGCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTLREVP*VQLGLQ
Trigger: CTGGAGGCCGAGCTGGACGCACGGCACCTCGCGCAG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCGGGCGCCCGCCACGTaGTGTCCAGCTCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRARAPAT*CPAQPR
Trigger: GCGAGGCTGAGCTGGACAGCACGTGGCGGGCGCCCG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCGCCTCCCGCCTTGTaGCGGTGCCCCATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTAPPAL*RCPMAC
Trigger: ACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCTCCAGCAGCCGGATaGTGGCCCGGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPPAAG*WPGSAP
Trigger: GGGAGCTGAGCCGGGCCACCATCCGGCTGCTGGAGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGGGCGAGCTGGACATaGCCAGCAGCGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRASWT*PAACAL
Trigger: CAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCAGCTGGGCCACGATaGCCTCCATGCAGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPAGPR*PPCSRG
Trigger: GCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGAGTGCGCGGCGACCTaGCACCAGCGCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAECAAT*HQRGGH
Trigger: GTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGTGAGGCACAGCGACTaGAGCGCCCCGTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAVRHSD*SAPSPR
Trigger: CCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCAC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCGGGGCTCGGGACTTTaGCTGGAGCCGCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTRGSGL*LEPRAV
Trigger: CACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCGTGGAGCCCCGCAGTaGCAGGGCCGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRARGAPQ*QGRGGK
Trigger: CTTCCCGCCACGGCCCTGCCACTGCGGGGCTCCACG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGAGGCAGGGGCCGCGGTaGGAGGGAGGCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTRQGPR*EGGLAV
Trigger: CACTGCAAGGCCTCCCTCCCACCGCGGCCCCTGCCT...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGGCCGCAGCCAGGGATaGCGGTGCATCGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPGRSQG*RCIVVV
Trigger: GACGACGACGATGCACCGTCATCCCTGGCTGCGGCC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTGGCGTGGGCCGCCTTaGGCCGCAGCAGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQWRGPP*AAAAGA
Trigger: CGCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGGCAGCTCCAGCCCTaGTCTGTTCTTGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGQLQP*SVLARA
Trigger: GGCGCGGGCAAGAACAGAGCAGGGCTGGAGCTGCCC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCTGGCCGCCGGGCACTaGCCATTTCTCCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPLAAGH*PFLPPP
Trigger: AGGCGGAGGGAGAAATGGGCAGTGCCCGGCGGCCAG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGGTCGGAGGACTCGCTaGCGCTGGAGAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPGRRTR*RWRGLR
Trigger: CCTCAGCCCTCTCCAGCGGCAGCGAGTCCTCCGACC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCAGCAGCCGGATGGTaGCCCGGCTCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPAAGW*PGSAPQ
Trigger: TTGGGGAGCTGAGCCGGGCCACCATCCGGCTGCTGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCATGCGTGCGTCCTTaGCGCCCGGTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVACVRP*RPVPLG
Trigger: CCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGCGCCAGCTTGGCCTTaGCCTTGGCCGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAAPAWP*PWPPRL
Trigger: CAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCTCGGGACTTTGGCTaGAGCCGCGGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTARDFG*SRGLCQ
Trigger: CTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGCGACCTCCTCGGTCTaGACCACGGCGTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPATSSV*TTASLV
Trigger: GACCAGCGACGCCGTGGTCCAGACCGAGGAGGTCGC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 72 bp GAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGGGACTTGAGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: EGPRAQGWARTP*PALHGRDLRPS
Trigger: GCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAGCCTGCCCAGAGGCTaGCAGCCAGACACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVSLPRG*QPDTRG
Trigger: GCCCCGCGTGTCTGGCTGTCAGCCTCTGGGCAGGCT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCAGCCGTGTACTGGGCTaGCCTCGGGGGTCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQASRVLG*PRGSGR
Trigger: CCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCT...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCCTGGGGCTCCGTCTaGTGCACTCGGTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVAWGSV*CTRSCA
Trigger: GGCGCAGGACCGAGTGCAGCAGACGGAGCCCCAGGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCTGCCCGGCTGAGGGGTaGCATCCTCAGGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPCPAEG*HPQGVW
Trigger: CCACACACCCTGAGGATGGCACCCCTCAGCCGGGCA...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCCACGATGGCCTCCATaGAGCCGCGGCGCGCACACA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAPRWPP*SRGAHT
Trigger: TGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCGAGGCTGGACACATTaGGGAGGATGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRARGWTH*GGCRRR
Trigger: GCGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCCAGCGCCCGCTGCTTaGGCACGTACAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAPAPAA*ARTGWA
Trigger: TGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCGCTGCCCTGCCCGCTaGAAGGTTCACTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTRCPAR*KVHWGW
Trigger: CCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCACCCCCAGGCCCTCGTaGACGAAGGGTGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPTPRPS*TKGAEM
Trigger: CATCTCCGCACCCTTCGTGCACGAGGGCCTGGGGGT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCTCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPSYAAR*LPVSRQ
Trigger: TTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGA...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCGGGCGAGCTGGACATaGCCAGCAGCGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVRASWT*PAACAL
Trigger: CAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCAGCTCAGCCTCGCTaGGGCCGGCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPAQPR*GRPPPA
Trigger: GGCTGGAGGAGGCCGGCCCCAGCGAGGCTGAGCTGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAGGTGGGGCGGCCGGTaGGTCTTTGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVRWGGR*VFACPL
Trigger: CAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
73% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRALKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGCGCGCCATCAGGGCTaGACCGGGGCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAARHQG*TGATDG
Trigger: CCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTGGCGTGGGCCGCCTTaGGCCGCAGCAGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRWRGPP*AAAAGA
Trigger: CGCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCCTGCGGGCCACGCTaGTGTGCGGCAGCGACGCGT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQACGPR*CAAATR
Trigger: ACGCGTCGCTGCCGCACATCAGCGTGGCCCGCAGGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQGLRVP*TPSGRG
Trigger: GCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCCTCCACCTTGCTGTTaGCCGGCTGAGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTPPPCC*PAEGCH
Trigger: ATGGCACCCCTCAGCCGGGCAACAGCAAGGTGGAGG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAVAWQI*GSMGIG
Trigger: CCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCAC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCTTGGCCGCCACGGCTaGCTCCCCACTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRALGRHG*LPTGVL
Trigger: AAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCCGGCAGCCAGGCCTaGTTCCGGGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQAGSQA*FRAPGE
Trigger: CTCTCCAGGGGCCCGGAAGCAGGCCTGGCTGCCGGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGACGGGCACGGGGAGTaGGCGGCGACCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQDGHGE*AATWHQ
Trigger: CTGGTGCCAGGTCGCCGCGCACTCCCCGTGCCCGTC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTTCCCGGGACCCCTCTaGGGGCCGCTCATCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQFPGPL*GPLIQP
Trigger: CGGCTGGATGAGCGGCCCGCAGAGGGGTCCCGGGAA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCTGGCCGCCGGGCACTaGCCATTTCTCCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVLAAGH*PFLPPP
Trigger: AGGCGGAGGGAGAAATGGGCAGTGCCCGGCGGCCAG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGGAGCCGCGGGCTGTaGCAGGCAAGGGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQWSRGL*QARGRH
Trigger: GTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRASPAFT*RKAPEP
Trigger: AGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCTCCAGCAGCCGGATaGTGGCCCGGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPPAAG*WPGSAP
Trigger: GGGAGCTGAGCCGGGCCACCATCCGGCTGCTGGAGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCGGCCTCGGTGCCGTaGAGGATTTGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTAASVP*RICSSR
Trigger: TCTGCTGCTGCAAATCCTCCACGGCACCGAGGCCGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTGCGCACGTACAGGCTaGGCACGCAGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVCARTG*ARSCLG
Trigger: CCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCATGGCGAGCAGGACTaGGCGCGGCCCTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGHGEQD*ARPSRG
Trigger: GCCACGGGAGGGCCGCGCCCAGTCCTGCTCGCCATG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGAACCTTGCTCAGGTaGTCTGCCGGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAGTLLR*SAGSQA
Trigger: GGCCTGGCTGCCGGCAGACCACCTGAGCAAGGTTCC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCGCGCGCTCAGGGCTaGGCCAGGACGCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGPRAQG*ARTPLP
Trigger: TGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVSQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTACAGAGGCAGGGAGCTaGGAGGGCGCCGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVTEAGS*EGAAQR
Trigger: TCTCTGGGCGGCGCCCTCCCAGCTCCCTGCCTCTGT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGGGTGGCTACCTGTGTaGCCCGCACCCCCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQGWLPV*PAPPAQ
Trigger: CTGCGCAGGGGGTGCGGGCCACACAGGTAGCCACCC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000535453.5
3UTR CAA 72 bp GCCAGGACGCCCTTGCCAGCGCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCCGTTTCCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: ARTPLPALHGRD*RPSGRPVSSWT
Trigger: GGTCCAGGAGGAAACGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 72 bp GGCTCACTGCCGGGACTCCCCTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCTGCGCCGGGCCGATAC +
Preference number: 4 (lower is better)
Translates to: GSLPGLPSVSFP*ASPAAAAPGRY
Trigger: GTATCGGCCCGGCGCAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGAGGGGAGTCCCGGCAGTGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTGGCACTGCCGCTGTTaGGGCTGTCGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAWHCRC*GCRWRG
Trigger: GCCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGGGCTCGGGCTCGCTaGGGGAGCTGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVRARAR*GSWRRS
Trigger: GCTCCTCCGCCAGCTCCCTCAGCGAGCCCGAGCCCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAGGGCTCGGGCTCGCTaGGGGAGCTGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRARAR*GSWRRS
Trigger: GCTCCTCCGCCAGCTCCCTCAGCGAGCCCGAGCCCT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCCGCTGGAGAGGGCTaGGGCCACACGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVAAGEG*GHTHQA
Trigger: GGCCTGGTGCGTGTGGCCTCAGCCCTCTCCAGCGGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCGACGCGTAGCGCTTaGCAGTCTCCGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRATRSA*QSPAGR
Trigger: CCGCCCGGCCGGAGACTGTCAAGCGCTACGCGTCGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGGGCAGATCCGTGGGTaGAGGCAGCGCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAGQIRG*RQRLLE
Trigger: CTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTSPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTQTQVL*ASRRLP
Trigger: GGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCTGGACTGGGCGGTaGGGTGTGGCTGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSWTGR*GVAVAP
Trigger: GGGGGCCACAGCCACACCTCACCGCCCAGTCCAGCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCGTCATTTGTTCTCTaGCCCCCAGGTGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPSFVL*PPGAPS
Trigger: TGAGGGGGCACCTGGGGGTCAGAGAACAAATGACGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGTTGGCGCGCATGCGTaGGTCCTTGGCGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQVGAHA*VLGARC
Trigger: GCACCGGGCGCCAAGGACGCACGCATGCGCGCCAAC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCGCGTTGGCGCGCATaGGTGCGTCCTTGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPRWRA*VRPWRP
Trigger: CGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAACCTGCAGCAGCTCTaGCACGGCCTGCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVNLQQL*HGLQPT
Trigger: GGTGGGCTGCAGGCCGTGGCAGAGCTGCTGCAGGTT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGCGCCTGCGCGAGGTaGCGTGCGTCCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSACAR*RASSSA
Trigger: GGCCGAGCTGGACGCACGGCACCTCGCGCAGGCGCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGTCGATGCGCGCCACTaGAAGCGCCAGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAVDARH*KRQLGL
Trigger: AAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGAC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCCGGCAGCCAGGCCTaGTTCCGGGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGAGSQA*FRAPGE
Trigger: CTCTCCAGGGGCCCGGAAGCAGGCCTGGCTGCCGGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGAGAGTGGCCCCTCTTaGGCCGCCAGTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTESGPS*AASFCS
Trigger: ACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGCGAGGAAAGGGAGCTaGATCGGGACAGCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPARKGS*IGTARV
Trigger: CACTCTCGCTGTCCCGATGCAGCTCCCTTTCCTCGC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCACGGGCTCTCGAAGCTaGCCAGCGAGCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRATGSRS*PASSQS
Trigger: GCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCAAAGCGCACGCTGCCTaGGTCCAGCTCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPKAHAA*VQLRWQ
Trigger: CTGCCATCTGAGCTGGACGCAGGCAGCGTGCGCTTT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCGGCCGGTGGGTCTTTaGCTGCCCGCTGGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRPVGL*LPAGPP
Trigger: CGGGGGACCAGCGGGCAGGCAAAGACCCACCGGCCG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGAGGGATGGCCGATGTaGGCCGGTGGGTTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAEGWPM*AGGLAW
Trigger: CCACGCCAACCCACCGGCGCACATCGGCCATCCCTC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTGGAGCCGCGGGCTGTaGCAGGCAAGGGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVWSRGL*QARGRH
Trigger: GTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCGTGGCGGGAAGCGTaGTGCGCAGGATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPWREA*CAGCGA
Trigger: TGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCTCGTGCACGAAGGGTaGGGAGATGGGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRALVHEG*GDGSLG
Trigger: GCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCCCCAGCGCTGTCCCTaGGAAGCAGCGGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQPQRCP*EAADPD
Trigger: GTCTGGGTCCGCTGCTTCGCAGGGACAGCGCTGGGG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGCTCGGGAGGACCATaGCGGTGGGCACGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRSSGGP*RWARRP
Trigger: GGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTTGCGCGCCAGGCCCTaGTCCGGCTGCGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQALRARP*SGCEKT
Trigger: CGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCTGCTTCCGGGCCCCTaGAGAGATTCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQLLPGP*RDSRPR
Trigger: GCGGGGCCTGGAATCTCTCCAGGGGCCCGGAAGCAG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCAGCTCAGCCTCGCTaGGGCCGGCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPAQPR*GRPPPA
Trigger: GGCTGGAGGAGGCCGGCCCCAGCGAGGCTGAGCTGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGCCGGGGAGCCGGAATaGCTACGGGCAGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGAGEPE*LRAARW
Trigger: CCACCTCGCTGCCCGTAGCCATTCCGGCTCCCCGGC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCACTGGGGATGGAGCTaGCGATGGACGGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAHWGWS*RWTGSR
Trigger: TCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTGCGTCCAGCTCAGATaGCAGCCGGCAGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQCVQLR*QPAALP
Trigger: CGGGAGCGCTGCCGGCTGCCATCTGAGCTGGACGCA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCAGTTCCAGCTCCTaGTCCGCGGCGCCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSSSSS*SAAPRG
Trigger: CCCTCGCGGCGCCGCGGACCAGGAGCTGGAACTGCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCTCATCCAGCCGGGTaGCTCGGGGCTTGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRAHPAG*LGACGA
Trigger: GGCGCCGCAAGCCCCGAGCCACCCGGCTGGATGAGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCACGGGGTGCCGGGCTaGGGACGTAGATCACTGTTC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAHGVPG*GRRSLF
Trigger: GAACAGTGATCTACGTCCCCAGCCCGGCACCCCGTG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGGGGTCCCTTTGGGCTaGGCACGGGGTGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGGVPLG*ARGAGL
Trigger: CAGCCCGGCACCCCGTGCCCAGCCCAAAGGGACCCC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGGGGTCCCTTTGGGCTaGGCACGGGGTGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQGVPLG*ARGAGL
Trigger: CAGCCCGGCACCCCGTGCCCAGCCCAAAGGGACCCC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCGGGGCTCGGGACTTTaGCTGGAGCCGCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQRGSGL*LEPRAV
Trigger: CACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTGCTGGAGTTGGTCTTaGGGGCGGCGACCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVCWSWS*GRRPPR
Trigger: CCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGGGTGGCGGAGGCAGTaGCCGGGGCTTTCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRGWRRQ*PGLSPR
Trigger: CCGCGGAGAAAGCCCCGGCCACTGCCTCCGCCACCC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQTCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTHPWWG*GFLLSS
Trigger: GGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTGCCCATGCTGGGGATaGGACGGGAGGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRACPCWG*DGRDGV
Trigger: GACACCATCCCTCCCGTCCCATCCCCAGCATGGGCA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCTGAAAGGGGGCTCCTaGCAGGCAGGAGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQALKGGS*QAGGRP
Trigger: GGGGCGACCTCCTGCCTGCCAGGAGCCCCCTTTCAG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQLALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPHVWSC*GPVAVT
Trigger: AGTGACCGCCACTGGCCCCCAACATGACCACACGTG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGACCCAGCAAGCCGACTaGCCAGCCCAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQTQQAD*PAQHPQ
Trigger: CTGGGGGTGCTGGGCTGGCCAGTCGGCTTGCTGGGT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGCCGCTGGAGAGGGCTaGGGCCACACGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEAAGEG*GHTHQA
Trigger: GGCCTGGTGCGTGTGGCCTCAGCCCTCTCCAGCGGC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRATAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGTGGCACACCTCGGTaGCTTATGGACGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGGTPR*LMDVLS
Trigger: AGACAGGACGTCCATAAGTCACCGAGGTGTGCCACC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAQTQVL*ASRRLP
Trigger: GGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGCTGGACTGGGCGGTaGGGTGTGGCTGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSWTGR*GVAVAP
Trigger: GGGGGCCACAGCCACACCTCACCGCCCAGTCCAGCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCCTGGGGCTCCGTCTaGTGCACTCGGTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAWGSV*CTRSCA
Trigger: GGCGCAGGACCGAGTGCAGCAGACGGAGCCCCAGGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCCGCCGTCTCGGGCCTaGAGCCAGTCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPPPSRA*SQSQQV
Trigger: GACCTGCTGGGACTGGCTGCAGGCCCGAGACGGCGG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCACGATGGCCTCCATaGAGCCGCGGCGCGCACACA +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPRWPP*SRGAHT
Trigger: TGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCCAGATTACGCAGCATaGCCACGGCGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQPDYAA*PRRPGP
Trigger: GGGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCAGCGCCCGCTGCTTaGGCACGTACAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPAPAA*ARTGWA
Trigger: TGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGGTGCTCCAGCGCCTaGGCGAGGTGCCGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRRCSSA*ARCRAS
Trigger: GGACGCACGGCACCTCGCGCAGGCGCTGGAGCACCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCCTTCTCTGCCTCCTTaGCGCCTCGGCGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAPSLPP*RLGGWA
Trigger: CGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCACCAGCTGGTCGATaGGCGCCACTGCAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPPAGR*APLQAP
Trigger: TGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCGCCAGTTTCTGCAGTaGCTTGCTGGCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTRQFLQ*LAGHRQ
Trigger: CTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTGCGCCGCCAGTTTCTaGAGTGCCTTGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRACAASF*SALLAT
Trigger: TGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCAGCGGTGGCGTCTTaGTCCGGCTGGGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPAVAS*SGWEAW
Trigger: CCATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGCCCTGCTCTGTTCTTaGCCGCGCCCCGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAALLCS*PRPETA
Trigger: AGCAGTCTCGGGGCGCGGGCAAGAACAGAGCAGGGC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCCTCGTCCGAGTCGTTaGCGTAGAAGCAGTACACGG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTPRPSR*RRSSTR
Trigger: CCGTGTACTGCTTCTACGGCAACGACTCGGACGAGG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGGCGGGGCAGCTGGTaGAGCCTTGGACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERRGSW*SLGRGR
Trigger: CCTGCCCCGTCCAAGGCTGCACCAGCTGCCCCGCCG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTTCCCGGGACCCCTCTaGGGGCCGCTCATCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPFPGPL*GPLIQP
Trigger: CGGCTGGATGAGCGGCCCGCAGAGGGGTCCCGGGAA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGGGCTGGGCACGGGGTaGCGGGCTGGGGACGTAGAT +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVGLGTG*RAGDVD
Trigger: ATCTACGTCCCCAGCCCGGCACCCCGTGCCCAGCCC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTCCGCGACCGCTGCTaGCCGGGGCTCGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLRDRC*PGLGTL
Trigger: CAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGAGGCTCCGCGACCGCTaGTGCCCGGGGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRLRDR*CPGLGT
Trigger: AGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCCTCTGCGTCTTGTGCTaGTTCGCCAGAAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRALCVLC*FARRVR
Trigger: GCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAG...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCGCACGGGCGATCTCTaGGTCTTGTGCTGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVRTGDL*VLCCFA
Trigger: GGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQCRTRR*PSHGDP
Trigger: CGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGAGGACAGCTCCTTCTaGCAGAAAGGCTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTEDSSF*QKGWPC
Trigger: GCAAGGCCAGCCTTTCTGGCAGAAGGAGCTGTCCTC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGACCGCCAGCAAGGCCTaGGGCTCCGTCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQTASKA*GSVCCT
Trigger: AGTGCAGCAGACGGAGCCCCAGGCCTTGCTGGCGGT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCGCGCGTCGCCAACATaGACAACAGCCAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRASPT*TTARRP
Trigger: TGGTCTTCTGGCTGTTGTCCATGTTGGCGACGCGCG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGAGATCTGCGGCTCGATaGGGATCGGGGCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQRSAAR*GSGRCR
Trigger: CCGGCAGCGCCCCGATCCCCATCGAGCCGCAGATCT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCACAGCACAGGTGGCCTaGCAGATCTGCGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRATAQVA*QICGSM
Trigger: CATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCACGCTCTTCAGGGTaGACTCCTTGGTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVARSSG*TPWWPA
Trigger: TGCGGGCCACCAAGGAGTCCACCCTGAAGAGCGTGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTCCCACAGCAGCTCCTaGTCACGGGCGCTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSHSSS*SRALRA
Trigger: GGCCCGCAGCGCCCGTGACCAGGAGCTGCTGTGGGA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCGGCGGCGCTGCCCATaGCGATCATCTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVRRRCP*RSSCAW
Trigger: CCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGGCCGCCTGGTGCTTaGCGGGCCGATGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERPPGA*RADGPA
Trigger: TGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGCTTGGCCTTGGCCTTaGCCGCCACGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPAWPWP*PPRLPP
Trigger: GGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGAGGCTGCCCACACCTaGGGTCCTCGCGGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQEAAHT*GPRGAK
Trigger: CTTCGCGCCGCGAGGACCCCAGGTGTGGGCAGCCTC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTCGGGACAGCGAGAGTaGCCCCTCTTGCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQSGQRE*PLLRRQ
Trigger: CTGGCGGCGCAAGAGGGGCCACTCTCGCTGTCCCGA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGGATGGAGCTGGCGATaGACGGGCTCTCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVGWSWR*TGSRSC
Trigger: GCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCGTCTTGCTCCGGCTaGGAGGCATGGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQASCSG*EAWSVR
Trigger: CCGGACAGACCATGCCTCCCAGCCGGAGCAAGACGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGTGAGGCACAGCGACTaGAGCGCCCCGTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRVRHSD*SAPSPR
Trigger: CCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCAC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGTCGCGTCCGCCTCCTaGGCCCGGGTCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPVASAS*ARVLGD
Trigger: GTCACCAAGGACCCGGGCCCAGGAGGCGGACGCGAC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTGGCGCCCTCCTGGATaGCGCGCCACTCCACGCTAT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAWRPPG*RATPRY
Trigger: ATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGGGGTCCCTTTGGGCTaGGCACGGGGTGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEGVPLG*ARGAGL
Trigger: CAGCCCGGCACCCCGTGCCCAGCCCAAAGGGACCCC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCCAGCTCCGAGGTCTTaGCAGGCCGGTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAPAPRS*QAGVGS
Trigger: GGAGCCTACACCGGCCTGCCAAGACCTCGGAGCTGG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGCGCGCCGGCGTTTTaGGCACCGGGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGECAPAF*APGRLR
Trigger: CCGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACGGGCTCTCGGAGGTaGTGCGCCGGGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTGSRR*CAGQGA
Trigger: AGCGCCCTGCCCGGCGCACCACCTCCGAGAGCCCGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGACTATTCCAGGAGGGTaGCGGAGGCAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQTIPGG*RRQWPG
Trigger: CCCCGGCCACTGCCTCCGCCACCCTCCTGGAATAGT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGTGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTWCHPW*GWGFLL
Trigger: CAGAAGGAAACCCCAGCCCCACCACGGATGACACCA...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQLSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGACCCCTTGTCACCCTaGTGCAGAGAGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVDPLSP*CREARW
Trigger: CCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGGAGGACCATGCCGGTaGGCACGGCGCCCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGGGPCR*ARRPEF
Trigger: GAACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGGAGGACCATGCCGGTaGGCACGGCGCCCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQGGPCR*ARRPEF
Trigger: GAACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCACCACGAAGGCCAGTaGGTGACACCTAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTHHEGQ*VTPKLC
Trigger: GCACAGCTTAGGTGTCACCCACTGGCCTTCGTGGTG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTACAGGCCCACGTGGTaGTGGCCAGGCAATCCGGGG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAYRPTW*WPGNPG
Trigger: CCCCGGATTGCCTGGCCACCACCACGTGGGCCTGTA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCGCCGCCGCTCTCGATaGTGGCCAGCGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQRRRSR*WPASCS
Trigger: AGAGCAACTCGCTGGCCATCATCGAGAGCGGCGGCG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCTCCCACTGCAGGCTaGACTGGGTGGCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSPTAG*TGWPRG
Trigger: CCCCCGAGGCCACCCAGTTCAGCCTGCAGTGGGAGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTCTCCCACTGCAGGCTaGACTGGGTGGCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRSPTAG*TGWPRG
Trigger: CCCCCGAGGCCACCCAGTTCAGCCTGCAGTGGGAGA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGCAAGGCCAGCGCGCTaGGGCTGGAGGCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEARPAR*GWRRTR
Trigger: TCTCGTGCGCCTCCAGCCTCAGCGCGCTGGCCTTGC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGGGCAGGGCCGAGCTaGTGCACCGCTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQWAGPS*CTAAEA
Trigger: AGCTTCTGCAGCGGTGCATCAGCTCGGCCCTGCCCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGCCTGCGGGCCACGCTaGTGTGCGGCAGCGACGCGT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEACGPR*CAAATR
Trigger: ACGCGTCGCTGCCGCACATCAGCGTGGCCCGCAGGC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVTAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAAGCCCCAGCCGTCCTaGCTGATCCTGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGKPQPS*LILGWG
Trigger: CCCCCAACCCAGGATCAGGCAGGACGGCTGGGGCTT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGAGCCGTGTACTGGGCTaGCCTCGGGGGTCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESRVLG*PRGSGR
Trigger: CCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCT...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCGAGGCGCGGATCTGTaGCCGCTGCACCATCTCGTC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGRGADL*PLHHLV
Trigger: GACGAGATGGTGCAGCGGGCACAGATCCGCGCCTCG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCCTGGGGCTCCGTCTaGTGCACTCGGTCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRAWGSV*CTRSCA
Trigger: GGCGCAGGACCGAGTGCAGCAGACGGAGCCCCAGGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGCCCGGCTGAGGGGTaGCATCCTCAGGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQCPAEG*HPQGVW
Trigger: CCACACACCCTGAGGATGGCACCCCTCAGCCGGGCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTGCCCGGCTGAGGGGTaGCATCCTCAGGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGCPAEG*HPQGVW
Trigger: CCACACACCCTGAGGATGGCACCCCTCAGCCGGGCA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGTTGGCGCGCATGCGTaGGTCCTTGGCGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRVGAHA*VLGARC
Trigger: GCACCGGGCGCCAAGGACGCACGCATGCGCGCCAAC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCGCGTTGGCGCGCATaGGTGCGTCCTTGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPRWRA*VRPWRP
Trigger: CGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCATCTGCTCCAGCACGTaGAGGACGCGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAICSST*RTRISL
Trigger: CAAGGAGATGCGCGTCCTGCACGTGCTGGAGCAGAT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCCAGGGCAGTCACGCTaGCCGCCTCCCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQPGQSR*PPPSAP
Trigger: AGGTGCTGAGGGAGGCGGGCAGCGTGACTGCCCTGG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCGAGGCTGGACACATTaGGGAGGATGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRGWTH*GGCRRR
Trigger: GCGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCTGTGCGAAGTCAGATaGTGCAGCAGCGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTLCEVR*CSSVCR
Trigger: TCTGCAGACGCTGCTGCAGCATCTGACTTCGCACAG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGATGGGCCAGCAGGTTaGGCAGGGCGGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGDGPAG*AGRRRC
Trigger: GCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCAGCGTCCGCTTACGTaGAGCTGGGCTGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRQRPLT*SWAGGA
Trigger: CGCCCCGCCAGCCCAGCTGCACGTAAGCGGACGCTG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGAGGTGCTCCAGCGCCTaGGCGAGGTGCCGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRCSSA*ARCRAS
Trigger: GGACGCACGGCACCTCGCGCAGGCGCTGGAGCACCT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCCCTGCTTCTCCAGGTaGTCCAGCGCCTGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRPCFSR*SSACAR
Trigger: CCTCGCGCAGGCGCTGGAGCACCTGGAGAAGCAGGG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGAGTGGCGGCCTCGGCTaGCGGCGGGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRSGGLG*RRALLL
Trigger: GAGAAGCAGGGCCCGCCGGCAGCCGAGGCCGCCACT...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTAGTGGCGGCCTCGGCTaGCGGCGGGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSGGLG*RRALLL
Trigger: GAGAAGCAGGGCCCGCCGGCAGCCGAGGCCGCCACT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCCAGCGGTGGCGTCTTaGTCCGGCTGGGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRPAVAS*SGWEAW
Trigger: CCATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAAAGCGCACGCTGCCTaGGTCCAGCTCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVKAHAA*VQLRWQ
Trigger: CTGCCATCTGAGCTGGACGCAGGCAGCGTGCGCTTT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGACGGGCACGGGGAGTaGGCGGCGACCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSDGHGE*AATWHQ
Trigger: CTGGTGCCAGGTCGCCGCGCACTCCCCGTGCCCGTC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCTCCGCGGAGTCAGTaGAGGAGTCGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGPPRSQ*RSRPPG
Trigger: CCCAGGAGGACGACTCCTGCACTGACTCCGCGGAGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGGTGGCTCGGGGCTTaGGGCGCCGCAGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGWLGA*GAAGQT
Trigger: TGTCTGGCCTGCGGCGCCGCAAGCCCCGAGCCACCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTCCCGCGTGGCAGCTaGTGCCTGGTGCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLPRGS*CLVQPR
Trigger: ACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGATCTCTGCGTCTTGTaGTGCTTCGCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPDLCVL*CFARRV
Trigger: CACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGTCGGAGGACTCGCTaGCGCTGGAGAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGRRTR*RWRGLR
Trigger: CCTCAGCCCTCTCCAGCGGCAGCGAGTCCTCCGACC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCGGGCCCTGCCGGGGTaGCGCTCGGAGCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECERALPG*RSELFA
Trigger: TGCGAAGAGCTCCGAGCGGCACCCCGGCAGGGCCCG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCGTCCTCATCTCGGATaGGCCGCCAGGTCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRRPHLG*AARSCP
Trigger: CGGGCACGACCTGGCGGCGCATCCGAGATGAGGACG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCCCCAGCGCTGTCCCTaGGAAGCAGCGGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGPQRCP*EAADPD
Trigger: GTCTGGGTCCGCTGCTTCGCAGGGACAGCGCTGGGG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSPAFT*RKAPEP
Trigger: AGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCCATGTTGCGCACCTTaGTGCTGGGCAAGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVPCCAP*CWARRH
Trigger: GTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCCTGCAGGGCAGGAGTaGCCAAGGGCAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQPAGQE*PRAGWE
Trigger: CTCCCACCCTGCCCTTGGGCACTCCTGCCCTGCAGG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCCTTCAGCTGGTCCCTaGTGGCCCCGGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRPSAGP*WPRQPL
Trigger: CAGGGGCTGCCGGGGCCAGCAGGGACCAGCTGAAGG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCCCGGAGCCGTGTACTaGGCTGCCCTCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSPGAVY*AALGGP
Trigger: CGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGCATGCGTGCGTCCTTaGCGCCCGGTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSACVRP*RPVPLG
Trigger: CCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGCATGCGTGCGTCCTTaGCGCCCGGTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRACVRP*RPVPLG
Trigger: CCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTGTGCAGCGCCGCGTTaGCGCGCATGCGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRCAAPR*RACVRP
Trigger: AGGACGCACGCATGCGCGCCAACGCGGCGCTGCACA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGATCTGCGGCTCGATaGGGATCGGGGCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGRSAAR*GSGRCR
Trigger: CCGGCAGCGCCCCGATCCCCATCGAGCCGCAGATCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTCCCACAGCAGCTCCTaGTCACGGGCGCTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRSHSSS*SRALRA
Trigger: GGCCCGCAGCGCCCGTGACCAGGAGCTGCTGTGGGA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCTGGGGACACGGCGGTaGCGGCCGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECELGTRR*RPPGAW
Trigger: CCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCTGGGGACACGGCGGTaGCGGCCGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRLGTRR*RPPGAW
Trigger: CCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCGCTTACGTGCAGCTaGGCTGGCGGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPLTCS*AGGAPG
Trigger: CCCAGGCGCCCCGCCAGCCCAGCTGCACGTAAGCGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCATGGCGAGCAGGACTaGGCGCGGCCCTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEHGEQD*ARPSRG
Trigger: GCCACGGGAGGGCCGCGCCCAGTCCTGCTCGCCATG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCAGCATATGTTCGCGTaGGCAGTACCCGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVQHMFA*AVPVAG
Trigger: GCCAGCGACGGGTACTGCCCACGCGAACATATGCTG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCTGCTTCCGGGCCCCTaGAGAGATTCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRLLPGP*RDSRPR
Trigger: GCGGGGCCTGGAATCTCTCCAGGGGCCCGGAAGCAG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCACGAGCTGGACGGCGTaGCGTCTTCCACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPTSWTA*RLPPPG
Trigger: GCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCACTGGGGATGGAGCTaGCGATGGACGGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQHWGWS*RWTGSR
Trigger: TCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAAGGTTCACTGGGGATaGAGCTGGCGATGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVKVHWG*SWRWTG
Trigger: GCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTCCGGCTGGGAGGCATaGTCTGTCCGGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSGWEA*SVRGCR
Trigger: CCGACAGCCCCGGACAGACCATGCCTCCCAGCCGGA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTGCGTCCAGCTCAGATaGCAGCCGGCAGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPCVQLR*QPAALP
Trigger: CGGGAGCGCTGCCGGCTGCCATCTGAGCTGGACGCA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCCCCATGGCCTGTCTaGCAGAGGTGGGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAPWPV*QRWGGR
Trigger: CCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGTGAGGCACAGCGACTaGAGCGCCCCGTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWVRHSD*SAPSPR
Trigger: CCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCAC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTCCCGGCCTCGTGGATaGACGGCCGGCGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSRPRG*TAGGSE
Trigger: CTCGGAGCCGCCGGCCGTCCATCCACGAGGCCGGGA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCTGGCACCCCGGGCGTaGTCTTCTGTGTGCCACGTG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGLAPRA*SSVCHV
Trigger: CACGTGGCACACAGAAGACCACGCCCGGGGTGCCAG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGGGGCTCGGGACTTTaGCTGGAGCCGCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRGSGL*LEPRAV
Trigger: CACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTACGGGCTCTCGGAGGTaGTGCGCCGGGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSTGSRR*CAGQGA
Trigger: AGCGCCCTGCCCGGCGCACCACCTCCGAGAGCCCGT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCGTGGAGCCCCGCAGTaGCAGGGCCGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWRGAPQ*QGRGGK
Trigger: CTTCCCGCCACGGCCCTGCCACTGCGGGGCTCCACG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGACTATTCCAGGAGGGTaGCGGAGGCAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQTIPGG*RRQWPG
Trigger: CCCCGGCCACTGCCTCCGCCACCCTCCTGGAATAGT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGLSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGACAGAGGCAGGGAGCTaGGAGGGCGCCGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQTEAGS*EGAAQR
Trigger: TCTCTGGGCGGCGCCCTCCCAGCTCCCTGCCTCTGT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGTGGGAGGCGGGGCTaGCAGCCATGTTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGGRRG*QPCCAP
Trigger: AGGTGCGCAACATGGCTGCCAGCCCCGCCTCCCACC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGGTGGGAGGCGGGGCTaGCAGCCATGTTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVGGRRG*QPCCAP
Trigger: AGGTGCGCAACATGGCTGCCAGCCCCGCCTCCCACC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGAGGCAGGGGCCGCGGTaGGAGGGAGGCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERQGPR*EGGLAV
Trigger: CACTGCAAGGCCTCCCTCCCACCGCGGCCCCTGCCT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQLALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCGCGCCATCAGGGCTaGACCGGGGCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVARHQG*TGATDG
Trigger: CCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCTGGGGAGGGCGCGGTaGTGCCTTCCGGACAGACGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWLGRAR*CLPDRR
Trigger: CCGTCTGTCCGGAAGGCATCACCGCGCCCTCCCCAG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGGCCGCAGCCAGGGATaGCGGTGCATCGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRGRSQG*RCIVVV
Trigger: GACGACGACGATGCACCGTCATCCCTGGCTGCGGCC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTCTGCACCCGCCCTTaGGGCACCCTCAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLCTRP*GTLKQW
Trigger: CCACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCAAGGCCAGCGCGCTaGGGCTGGAGGCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWARPAR*GWRRTR
Trigger: TCTCGTGCGCCTCCAGCCTCAGCGCGCTGGCCTTGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGGGTCTCGTCAGCAATaGGGCTGGGCTGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRGSRQQ*GWAGSG
Trigger: CCCGGACCCAGCCCAGCCTCATTGCTGACGAGACCC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTGTAGGGCCTTCAGCTaGTCCAGCACCTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQACRAFS*SSTSVC
Trigger: GCAGACGGAGGTGCTGGAGCAGCTGAAGGCCCTACA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCGGATCTGTGCCCGCTaGACCATCTCGTCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQRICAR*TISSEV
Trigger: CACCTCGGACGAGATGGTGCAGCGGGCACAGATCCG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGAGCTCCTTGTCAATCTaGTCCAGGCGCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQSSLSI*SRREAR
Trigger: CCGCGCCTCGCGCCTGGAGCAGATTGACAAGGAGCT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGGGGCTCCGTCTGCTaGACTCGGTCCTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRWGSVC*TRSCAS
Trigger: GGAGGCGCAGGACCGAGTGCAGCAGACGGAGCCCCA...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCCAGGGCAGTCACGCTaGCCGCCTCCCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRPGQSR*PPPSAP
Trigger: AGGTGCTGAGGGAGGCGGGCAGCGTGACTGCCCTGG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGCCCGCAGGACACACTaGACCAGGGCAGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPARRTH*TRAVTL
Trigger: CAGCGTGACTGCCCTGGTGCAGTGTGTCCTGCGGGC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCCAGATTACGCAGCATaGCCACGGCGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGPDYAA*PRRPGP
Trigger: GGGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGAGTGGCGGCCTCGGCTaGCGGCGGGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALSGGLG*RRALLL
Trigger: GAGAAGCAGGGCCCGCCGGCAGCCGAGGCCGCCACT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGTGCGAGCCAGCGCCTaGCCCTGCAGGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSVRASA*PCRKGL
Trigger: CAGCCCCTTCCTGCAGGGGCAGGCGCTGGCTCGCAC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCTTCTCTGCCTCCTTaGCGCCTCGGCGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPSLPP*RLGGWA
Trigger: CGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCACTGGTGTCCTTCTCTaGCTCCTTGCCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGTGVLL*LLAASA
Trigger: CGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGACTGGTGTCCTTCTCTaGCTCCTTGCCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQTGVLL*LLAASA
Trigger: CGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCGAGCTCACAGAGCTaGAGCGGCTCAGCACAAGCG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQASSQS*SGSAQA
Trigger: CGCTTGTGCTGAGCCGCTGCAGCTCTGTGAGCTCGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTCCTCCCGCCGCCGGTaGCCTGCAAAGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSSRRR*PAKWRP
Trigger: CGGCCTCCACTTTGCAGGGCACCGGCGGCGGGAGGA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCGCCTCCCGCCTTGTaGCGGTGCCCCATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAPPAL*RCPMAC
Trigger: ACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGAGGGATGGCCGATGTaGGCCGGTGGGTTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVREGWPM*AGGLAW
Trigger: CCACGCCAACCCACCGGCGCACATCGGCCATCCCTC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCCTCCTTCCGGCCCTaGGGACGCTCCCGCGTAAAA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVASFRP*GRSRVK
Trigger: TTTTACGCGGGAGCGTCCGCAGGGCCGGAAGGAGGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGAGCTGATGCACCGCTaGAGAAGCTCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVELMHR*RSSSAA
Trigger: GGCCGCGGAGGAGCTTCTGCAGCGGTGCATCAGCTC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGAGCTGATGCACCGCTaGAGAAGCTCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGELMHR*RSSSAA
Trigger: GGCCGCGGAGGAGCTTCTGCAGCGGTGCATCAGCTC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGGGTGGCTCGGGGCTTaGGGCGCCGCAGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPGWLGA*GAAGQT
Trigger: TGTCTGGCCTGCGGCGCCGCAAGCCCCGAGCCACCC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGTGGCTCGGGGCTTaGGGCGCCGCAGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGWLGA*GAAGQT
Trigger: TGTCTGGCCTGCGGCGCCGCAAGCCCCGAGCCACCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCTCCCGCGTGGCAGCTaGTGCCTGGTGCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGELPRGS*CLVQPR
Trigger: ACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCGTGGTCTTCTGTGTaGCACGTGGCTTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQAWSSV*HVASRG
Trigger: GCCCCGAGAAGCCACGTGGCACACAGAAGACCACGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCTCCGCGACCGCTGCTaGCCGGGGCTCGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWLRDRC*PGLGTL
Trigger: CAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGCTTCGCCAGAAGGGTaGGCGCCGGCGTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPASPEG*APAFWA
Trigger: TGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCGCCGGGCCGGCCTCTaGATGAACGGGATCCGCACG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSRRAGL*MNGIRT
Trigger: CGTGCGGATCCCGTTCATGCAGAGGCCGGCCCGGCG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCCGTGGCGGGAAGCGTaGTGCGCAGGATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEPWREA*CAGCGA
Trigger: TGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTCGTACGCAGCCCGCTaGCTTCCCGTCTCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSYAAR*LPVSRQ
Trigger: TTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGCCCTGCGTTCACCTaGCGGAAGGCCCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSPAFT*RKAPEP
Trigger: AGGTTCGGGGGCCTTCCGGCAGGTGAACGCAGGGCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCTGCTGGAGCTTTTCTaGAGAAAAGAGGTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTLLELF*RKEVVG
Trigger: GCCGACGACCTCTTTTCTGCAGAAAAGCTCCAGCAG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGAAAGCAACACATGTCTaGCTCCTGCTCCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTKATHV*LLLPKP
Trigger: GGGTTTGGGGAGCAGGAGGCAGACATGTGTTGCTTT...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGAGCTCCTGCAGCGTCTaGGATCACAGGGTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQSSCSV*DHRVRG
Trigger: CCCTCTGACCCTGTGATCCCAGACGCTGCAGGAGCT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCACCGCCAGCAAGGCCTaGGGCTCCGTCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPTASKA*GSVCCT
Trigger: AGTGCAGCAGACGGAGCCCCAGGCCTTGCTGGCGGT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCATCCTCAGGGTGTGTaGGGACCTCTGTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAHPQGV*GPLSRG
Trigger: ACCCCGAGACAGAGGTCCCCACACACCCTGAGGATG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCGGGCGAGCTGGACATaGCCAGCAGCGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECERASWT*PAACAL
Trigger: CAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCAGCTGGGCCACGATaGCCTCCATGCAGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPAGPR*PPCSRG
Trigger: GCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCTGTCGGAGGCCAGCTaGGCCACGATGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGALSEAS*ATMASM
Trigger: CATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGGGTGGCGACGAGGCTaGACACATTGCGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGGWRRG*THCGGC
Trigger: GCATCCTCCGCAATGTGTCCAGCCTCGTCGCCACCC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCGCTTACGTGCAGCTaGGCTGGCGGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPLTCS*AGGAPG
Trigger: CCCAGGCGCCCCGCCAGCCCAGCTGCACGTAAGCGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCTTGGCCTTGGCCTTaGCCGCCACGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGAWPWP*PPRLPP
Trigger: GGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCGCCAGCTTGGCCTTaGCCTTGGCCGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGAPAWP*PWPPRL
Trigger: CAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGATGTCCTCCACCAGCTaGTCGATGCGCGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQMSSTS*SMRATA
Trigger: TGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACAT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTCTGCAGTGCCTTGCTaGCCACAGACAGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQSAVPC*PQTAGQ
Trigger: CTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTCGGGACAGCGAGAGTaGCCCCTCTTGCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRSGQRE*PLLRRQ
Trigger: CTGGCGGCGCAAGAGGGGCCACTCTCGCTGTCCCGA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCCGGGGAGCCGGAATaGCTACGGGCAGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGAGEPE*LRAARW
Trigger: CCACCTCGCTGCCCGTAGCCATTCCGGCTCCCCGGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACGAGCTGGACGGCGTaGCGTCTTCCACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTSWTA*RLPPPG
Trigger: GCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGAAGGTTCACTGGGGATaGAGCTGGCGATGGACGGGC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQKVHWG*SWRWTG
Trigger: GCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCGCTGCAAGGTTCACTaGGGATGGAGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQRCKVH*GWSWRW
Trigger: CCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCGTCTTGCTCCGGCTaGGAGGCATGGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGASCSG*EAWSVR
Trigger: CCGGACAGACCATGCCTCCCAGCCGGAGCAAGACGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCCTGTCTGGCAGAGGTaGGGCGGCCGGTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAPVWQR*GGRWVF
Trigger: AAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACGAGGCCTCCCGCGTaGCAGCTGCTGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTRPPA*QLLPGA
Trigger: TGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGGACTCGCTGCCGCTaGAGAGGGCTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRRTRCR*RGLRPH
Trigger: GTGTGGCCTCAGCCCTCTCCAGCGGCAGCGAGTCCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGGACTCGCTGCCGCTaGAGAGGGCTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGARTRCR*RGLRPH
Trigger: GTGTGGCCTCAGCCCTCTCCAGCGGCAGCGAGTCCT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGAGCCTTGGCGAGGCTaGGACCGTCCACGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVREPWRG*DRPRRC
Trigger: GCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCGGAGATGGGAGCCTTaGCGAGGCTGGGACCGTCCA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVRRWEP*RGWDRP
Trigger: TGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCGGAGATGGGAGCCTTaGCGAGGCTGGGACCGTCCA +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRRWEP*RGWDRP
Trigger: TGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGTACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVREVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTCACCAGCGACCTGGTaGCTGGCTTCGCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQSPATW*LASPFP
Trigger: GGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGACAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCTGGGCGGTGAGGTGTaGCTGTGGCCCCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECELGGEV*LWPPRQ
Trigger: CTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCGCGCCATCAGGGCTaGACCGGGGCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRARHQG*TGATDG
Trigger: CCCATCTGTTGCCCCGGTCCAGCCCTGATGGCGCGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCACGCAGGGAGACCCTaGGGTCTGGCTCGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRHAGRP*GLARAP
Trigger: TGGGGCTCGAGCCAGACCCCAGGGTCTCCCTGCGTG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTCGACCGACAGACGATaGGTCGGCCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQASTDRR*VGLSFP
Trigger: TGGGAAGGAGAGGCCGACCCATCGTCTGTCGGTCGA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGGTTGTACAGGCTGGTaGTGTCCATCTGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVGCTGW*CPSVGP
Trigger: AGGCCCTACAGATGGACATCACCAGCCTGTACAACC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGCCGCCGCTCTCGATaGTGGCCAGCGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERRRSR*WPASCS
Trigger: AGAGCAACTCGCTGGCCATCATCGAGAGCGGCGGCG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTGGCACTGCCGCTGTTaGGGCTGTCGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGWHCRC*GCRWRG
Trigger: GCCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCTCTGCACCCGCCCTTaGGGCACCCTCAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRLCTRP*GTLKQW
Trigger: CCACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGTCCGGCCGGGCTTTaGGCCGTCCTTGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGPAGL*AVLVCG
Trigger: CCCGCAGACAAGGACGGCTCAAAGCCCGGCCGGACC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGGCAGATCCGTGGGTaGAGGCAGCGCCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGQIRG*RQRLLE
Trigger: CTCCAGCAGGCGCTGCCTTCACCCACGGATCTGCCC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGGAGAAGGCGAAAGTaGGCTCAGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQWRRRK*AQDSGW
Trigger: CCACCCCGAGTCCTGAGCTCACTTTCGCCTTCTCCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVAVGVP*VDCPET
Trigger: GGTCTCTGGACAATCAACTCAAGGTACGCCCACTGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCCCCATGTTCCAGCTaGGGTCACCATCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAPCSS*GHHPMP
Trigger: GGGCATGGGATGGTGACCTCAGCTGGAACATGGGGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCCTCCACCTTGCTGTTaGCCGGCTGAGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRPPPCC*PAEGCH
Trigger: ATGGCACCCCTCAGCCGGGCAACAGCAAGGTGGAGG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGACCACCTCCACCTTaGTGTTGCCCGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRRPPPP*CCPAEG
Trigger: CCCCTCAGCCGGGCAACAGCAAGGTGGAGGTGGTCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAGACCACCTCCACCTTaGTGTTGCCCGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRPPPP*CCPAEG
Trigger: CCCCTCAGCCGGGCAACAGCAAGGTGGAGGTGGTCT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCCCTGGTCCGGCTaGGAGAAGACGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGRPWSG*EKTMLC
Trigger: GCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEVAWQI*GSMGIG
Trigger: CCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCAC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCACAAGTTCCGAAGGATaGTGGACACCACCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRATSSEG*WTPPGG
Trigger: TCCACCAGGTGGTGTCCAGCATCCTTCGGAACTTGT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCGAGGCTGGACACATTaGGGAGGATGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRRGWTH*GGCRRR
Trigger: GCGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCGTGCCGCACGCGTTaGTCACGATGGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQACRTR*SRWSGC
Trigger: ACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCCAGCGCCCGCTGCTTaGGCACGTACAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSPAPAA*ARTGWA
Trigger: TGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCCTCCAGCGCCCGCTaGTTGCGCACGTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGASSAR*LRTYRL
Trigger: CAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTGCGAGCCAGCGCCTaGCCCTGCAGGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALVRASA*PCRKGL
Trigger: CAGCCCCTTCCTGCAGGGGCAGGCGCTGGCTCGCAC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCCACCAGCTGGTCGATaGGCGCCACTGCAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRPPAGR*APLQAP
Trigger: TGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTCGTCGGACGAGGTGTaGAGGGCGGAGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVSSDEV*RAEMSS
Trigger: GGAGGACATCTCCGCCCTGCACACCTCGTCCGACGA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCGAGCTCACAGAGCTaGAGCGGCTCAGCACAAGCG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRASSQS*SGSAQA
Trigger: CGCTTGTGCTGAGCCGCTGCAGCTCTGTGAGCTCGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACGGGCTCTCGAAGCTaGCCAGCGAGCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATGSRS*PASSQS
Trigger: GCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGATGGTGCCGCTGCCCTaGCCGCTGCAAGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQMVPLP*PLQGSL
Trigger: CAGTGAACCTTGCAGCGGGCAGGGCAGCGGCACCAT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGGCAGCTCCAGCCCTaGTCTGTTCTTGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGQLQP*SVLARA
Trigger: GGCGCGGGCAAGAACAGAGCAGGGCTGGAGCTGCCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCTGGCCGCCGGGCACTaGCCATTTCTCCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSLAAGH*PFLPPP
Trigger: AGGCGGAGGGAGAAATGGGCAGTGCCCGGCGGCCAG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCGTGGTCTTCTGTGTaGCACGTGGCTTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAAWSSV*HVASRG
Trigger: GCCCCGAGAAGCCACGTGGCACACAGAAGACCACGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCTCCGCGACCGCTGCTaGCCGGGGCTCGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALLRDRC*PGLGTL
Trigger: CAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGGCTCCGCGACCGCTaGTGCCCGGGGCTCGGGACT +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARLRDR*CPGLGT
Trigger: AGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCTTCGCCAGAAGGGTaGGCGCCGGCGTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRASPEG*APAFWA
Trigger: TGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCGGGCCCTGCCGGGGTaGCGCTCGGAGCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRALPG*RSELFA
Trigger: TGCGAAGAGCTCCGAGCGGCACCCCGGCAGGGCCCG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRCRTRR*PSHGDP
Trigger: CGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTGTTGCGCACCTTGCTaGTGGGCAAGGCGTCACGGG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQCCAPC*WARRHG
Trigger: CCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCCAGAGACCGCGGACTaGCTGTCCCCTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGPETAD*LSPSGD
Trigger: GTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCCAGAGACCGCGGACTaGCTGTCCCCTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPPETAD*LSPSGD
Trigger: GTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGTGGGAGGGAGGCCTTaGAGTGGGCGTACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGVGGRP*SGRTLS
Trigger: ACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCACCACCAGCTGTCCCTaGCGATGGACAATGAAAACA +
Preference number: 4 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPTTSCP*RWTMKT
Trigger: TGTTTTCATTGTCCATCGGCAGGGACAGCTGGTGGT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCAGGAGTCACTGGTGTaGACAAGTACAGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVQESLV*TSTGPR
Trigger: ACGTGGGCCTGTACTTGTCCACACCAGTGACTCCTG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCCAGGGTGGGCGGCTaGAACTTGAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGPRVGG*NLRLYR
Trigger: CCTGTACAACCTCAAGTTCCAGCCGCCCACCCTGGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCCCGGAGCCGTGTACTaGGCTGCCCTCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQPGAVY*AALGGP
Trigger: CGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCCCAAAGCTGTCCTTaGAGGGCCCGGAGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPQSCP*RARSRV
Trigger: TACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCAGCAGCCGGATGGTaGCCCGGCTCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPAAGW*PGSAPQ
Trigger: TTGGGGAGCTGAGCCGGGCCACCATCCGGCTGCTGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCGCGCTGTATCCTCCTaGTCGCGCGTCGCCAACATG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGARAVSS*SRVANM
Trigger: CATGTTGGCGACGCGCGACCAGGAGGATACAGCGCG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCAGCCCGAGCGGCGCATaGCCACGCAGCTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARSPSGA*PRSSRA
Trigger: CGCCCGAGAGCTGCGTGGCCATGCGCCGCTCGGGCT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGAGCCCGAGCGGCGCATaGCCACGCAGCTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQSPSGA*PRSSRA
Trigger: CGCCCGAGAGCTGCGTGGCCATGCGCCGCTCGGGCT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGGCGGCCTCGGTGCCGTaGAGGATTTGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGAASVP*RICSSR
Trigger: TCTGCTGCTGCAAATCCTCCACGGCACCGAGGCCGC...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCGGCCTCGGTGCCGTaGAGGATTTGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAASVP*RICSSR
Trigger: TCTGCTGCTGCAAATCCTCCACGGCACCGAGGCCGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTGTGCAGCGCCGCGTTaGCGCGCATGCGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGCAAPR*RACVRP
Trigger: AGGACGCACGCATGCGCGCCAACGCGGCGCTGCACA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTTGCGCGCCAGGCCCTaGTCCGGCTGCGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGLRARP*SGCEKT
Trigger: CGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTCAGGGTGGACTCCTTaGTGGCCCGCAGGACACACT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGSGWTP*WPAGHT
Trigger: AGTGTGTCCTGCGGGCCACCAAGGAGTCCACCCTGA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGGTGGCGACGAGGCTaGACACATTGCGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGWRRG*THCGGC
Trigger: GCATCCTCCGCAATGTGTCCAGCCTCGTCGCCACCC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCGGCGGCGCTGCCCATaGCGATCATCTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPRRRCP*RSSCAW
Trigger: CCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACGGCCGCCTGGTGCTTaGCGGGCCGATGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARPPGA*RADGPA
Trigger: TGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCGGCCGCCTGGTGCTTaGCGGGCCGATGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRPPGA*RADGPA
Trigger: TGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTGCGCACGTACAGGCTaGGCACGCAGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSCARTG*ARSCLG
Trigger: CCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCGGCTGCCTCCCCACTaGTGTCCTTCTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQRLPPH*CPSLPP
Trigger: AGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCAAGGTCAAGCCGGCTaGGCCGAGGCTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRQGQAG*AEAAHT
Trigger: GGTGTGGGCAGCCTCGGCCCAGCCGGCTTGACCTTG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCTGCTTCCGGGCCCCTaGAGAGATTCCAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECELLPGP*RDSRPR
Trigger: GCGGGGCCTGGAATCTCTCCAGGGGCCCGGAAGCAG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCGGGGAGCCGGAATaGCTACGGGCAGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALAGEPE*LRAARW
Trigger: CCACCTCGCTGCCCGTAGCCATTCCGGCTCCCCGGC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCGCTGCAAGGTTCACTaGGGATGGAGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGRCKVH*GWSWRW
Trigger: CCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGAGTGCGCGGCGACCTaGCACCAGCGCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAECAAT*HQRGGH
Trigger: GTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGAGGTGGGGCGGCCGGTaGGTCTTTGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRWGGR*VFACPL
Trigger: CAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATCCCGGCCTCGTGGATaGACGGCCGGCGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASRPRG*TAGGSE
Trigger: CTCGGAGCCGCCGGCCGTCCATCCACGAGGCCGGGA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGGCGCCCTCCTGGATaGCGCGCCACTCCACGCTAT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRWRPPG*RATPRY
Trigger: ATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCA...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGACGAGGCCTCCCGCGTaGCAGCTGCTGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECETRPPA*QLLPGA
Trigger: TGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGT...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTCCCCGGAGCACAGCTaGCACCCCGGGCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESPEHS*HPGRGL
Trigger: AAGACCACGCCCGGGGTGCCAGCTGTGCTCCGGGGA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTCCCCGGAGCACAGCTaGCACCCCGGGCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSPEHS*HPGRGL
Trigger: AAGACCACGCCCGGGGTGCCAGCTGTGCTCCGGGGA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGCTCGGGACTTTGGCTaGAGCCGCGGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSARDFG*SRGLCQ
Trigger: CTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGAGGACTCGCTGCCGCTaGAGAGGGCTGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERTRCR*RGLRPH
Trigger: GTGTGGCCTCAGCCCTCTCCAGCGGCAGCGAGTCCT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCGACCTCCTCGGTCTaGACCACGGCGTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGATSSV*TTASLV
Trigger: GACCAGCGACGCCGTGGTCCAGACCGAGGAGGTCGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCGAAGGGTGCGGAGATaGGAGCCTTGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERRVRR*EPWRGW
Trigger: CCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGTGGCGGAGGCAGTaGCCGGGGCTTTCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGWRRQ*PGLSPR
Trigger: CCGCGGAGAAAGCCCCGGCCACTGCCTCCGCCACCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGGGTGGCGGAGGCAGTaGCCGGGGCTTTCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARGWRRQ*PGLSPR
Trigger: CCGCGGAGAAAGCCCCGGCCACTGCCTCCGCCACCC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCGCCCCGTTTCCTCCTaGACCTCCGCGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRRPVSS*TSAAQR
Trigger: CCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGGGCG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCACCCCCACCCTTTTaGGCTCCGCCGGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPPPPF*APPERL
Trigger: CAAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCAGGGGGATCCGTTaGCCTCTGCCCCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGRGIR*PLPLPP
Trigger: GGGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAACGTGCAGGCTCCGCTaGGGAGAGGCCAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGATCRLR*GEASAG
Trigger: GCCCGCGCTGGCCTCTCCCCAGCGGAGCCTGCACGT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTCCCAGAGCCTCGGGTaGAGGGCAAGGCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESQSLG*RARLGP
Trigger: GGGACCCAGCCTTGCCCTCCACCCGAGGCTCTGGGA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTGGCCTTGCCCATGCTaGGGATGGGACGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRWPCPC*GWDGRD
Trigger: ATCCCTCCCGTCCCATCCCCAGCATGGGCAAGGCCA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGTGAGGTGTGGCTGTaGCCCCCACGGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGEVWL*PPRQGM
Trigger: CATCCCCTGCCGTGGGGGCCACAGCCACACCTCACC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTGGGCGGTGAGGTGTaGCTGTGGCCCCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLGGEV*LWPPRQ
Trigger: CTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGHVWSC*GPVAVT
Trigger: AGTGACCGCCACTGGCCCCCAACATGACCACACGTG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTTGTTCAGGTCTCCAGTaGGGATCAGGCTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVCSGLQ*GSGLGL
Trigger: CAACCCCAAGCCTGATCCCCACTGGAGACCTGAACA...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGAGGGGCACAGGGACTaGAAGTCAGGTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVEGHRD*KSGGRG
Trigger: GCCTCTGCCACCTGACTTCCAGTCCCTGTGCCCCTC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCTCAGGGACCACCATTTaGCTGTTCCCAGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRASGTTI*LFPEGE
Trigger: TTCTCCCTCTGGGAACAGCCAAATGGTGGTCCCTGA...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGGGACGCAGTGTGTaGCTTGCCATGTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGRGRSV*LAMSSG
Trigger: GCCGGATGACATGGCAAGCCACACACTGCGTCCCCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGGGCTCAGTCGCAGGTaGGAGGATGGAGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEGLSRR*EDGVGL
Trigger: CAGCCCGACTCCATCCTCCCACCTGCGACTGAGCCC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
3UTR CAA 72 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGT +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYP*AIRGAAGRGEC
Trigger: ACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCGGACAGACGGCCCCTaGCCTAAGCCCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRTDGP*PKPQPS
Trigger: GGACGGCTGGGGCTTAGGTCAGGGGCCGTCTGTCCG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGTCTGCAGACAGTTGTaGTCCCGGAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAVCRQL*SRSTCL
Trigger: CAGGCAGGTGCTCCGGGATCACAACTGTCTGCAGAC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGTCTGCAGACAGTTGTaGTCCCGGAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPVCRQL*SRSTCL
Trigger: CAGGCAGGTGCTCCGGGATCACAACTGTCTGCAGAC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCCTCAGTGGGCGTCGTaGGGCACAGCGACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALPQWAS*GTATGA
Trigger: CGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCAGCCACGTGACAATTaGATTGGCGCCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAQPRDN*IGALLD
Trigger: ATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCCCGCTGGTCTTGACTaGGGCTGCGCCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRPAGLD*GCAPFL
Trigger: GAGAAAAGGGGCGCAGCCTCAGTCAAGACCAGCGGG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTGCGGTCCTGGGCACTaGCCACGCCCACATGTGATG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRCGPGH*PRPHVM
Trigger: CATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQCSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQAVGVP*VDCPET
Trigger: GGTCTCTGGACAATCAACTCAAGGTACGCCCACTGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACAGATGGGGCCGGGTaGGGTAATGCTGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATDGAG*GNAVGA
Trigger: AGCTCCGACAGCATTACCTCACCCGGCCCCATCTGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGCGAGTCGGACAGCTaGCGGTGTCGTCCTTACGCC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGECESDS*RCRPYA
Trigger: GGCGTAAGGACGACACCGTCAGCTGTCCGACTCGCA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTTTGGGTTGCCCCTCTaGGGAACCTGCAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGFGLPL*GTCRAG
Trigger: TCCTGCCCTGCAGGTTCCTCAGAGGGGCAACCCAAA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCCATCTCGTCCGAGGTaGCGAAGCGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVPSRPR*RSAPPS
Trigger: TGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCCATCTCGTCCGAGGTaGCGAAGCGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPPSRPR*RSAPPS
Trigger: TGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCGGATCTGTGCCCGCTaGACCATCTCGTCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRICAR*TISSEV
Trigger: CACCTCGGACGAGATGGTGCAGCGGGCACAGATCCG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGGCCCTGGTCCGGCTaGGAGAAGACGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVRPWSG*EKTMLC
Trigger: GCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRVAWQI*GSMGIG
Trigger: CCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCAC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGAACCTGCAGCAGCTCTaGCACGGCCTGCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRNLQQL*HGLQPT
Trigger: GGTGGGCTGCAGGCCGTGGCAGAGCTGCTGCAGGTT...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCACGATGGCCTCCATaGAGCCGCGGCGCGCACACA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPRWPP*SRGAHT
Trigger: TGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCCAGGGCAGTCACGCTaGCCGCCTCCCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALPGQSR*PPPSAP
Trigger: AGGTGCTGAGGGAGGCGGGCAGCGTGACTGCCCTGG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTACAGGTTCCAGAGCGTaGCGCACGCGTTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVTGSRA*RTRCSR
Trigger: TCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCAGATTACGCAGCATaGCCACGGCGCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRPDYAA*PRRPGP
Trigger: GGGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGATCTTGTGCTTGGAGTaGACCAGATTACGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTILCLE*TRLRSM
Trigger: CATGCTGCGTAATCTGGTGCACTCCAAGCACAAGAT...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCAGGGCGGCGGCGCTaGCCATGGCGATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAGRRR*PWRSSC
Trigger: ACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACTGCGCGAGGTGCCGTaGGTCCAGCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALREVP*VQLGLQ
Trigger: CTGGAGGCCGAGCTGGACGCACGGCACCTCGCGCAG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGAGGTGCTCCAGCGCCTaGGCGAGGTGCCGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRCSSA*ARCRAS
Trigger: GGACGCACGGCACCTCGCGCAGGCGCTGGAGCACCT...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCCGGCAGCCAGGCCTaGTTCCGGGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPAGSQA*FRAPGE
Trigger: CTCTCCAGGGGCCCGGAAGCAGGCCTGGCTGCCGGC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCTTCTCGGGAACCTTaGTCAGGTGGTCTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRASREP*SGGLPA
Trigger: TGCCGGCAGACCACCTGAGCAAGGTTCCCGAGAAGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTGCGCCGCCAGTTTCTaGAGTGCCTTGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVCAASF*SALLAT
Trigger: TGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCGGGCGCCCGCCACGTaGTGTCCAGCTCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPRAPAT*CPAQPR
Trigger: GCGAGGCTGAGCTGGACAGCACGTGGCGGGCGCCCG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGACGGGCTCTCGAAGCTaGCCAGCGAGCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRTGSRS*PASSQS
Trigger: GCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCTCCGCGGAGTCAGTaGAGGAGTCGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPPRSQ*RSRPPG
Trigger: CCCAGGAGGACGACTCCTGCACTGACTCCGCGGAGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCGCCTCCCGCCTTGTaGCGGTGCCCCATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQAPPAL*RCPMAC
Trigger: ACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCTCGTCCGAGTCGTTaGCGTAGAAGCAGTACACGG +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPRPSR*RRSSTR
Trigger: CCGTGTACTGCTTCTACGGCAACGACTCGGACGAGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGAGGGATGGCCGATGTaGGCCGGTGGGTTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPEGWPM*AGGLAW
Trigger: CCACGCCAACCCACCGGCGCACATCGGCCATCCCTC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCGGCGGGGCAGCTGGTaGAGCCTTGGACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPRRGSW*SLGRGR
Trigger: CCTGCCCCGTCCAAGGCTGCACCAGCTGCCCCGCCG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCAGCTGCTGCCTGGTaGAGCCACGTGACAATTGAA +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQAAAAW*SHVTIE
Trigger: TTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGGCTGGGCACGGGGTaGCGGGCTGGGGACGTAGAT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGLGTG*RAGDVD
Trigger: ATCTACGTCCCCAGCCCGGCACCCCGTGCCCAGCCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGATCTCTGCGTCTTGTaGTGCTTCGCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQDLCVL*CFARRV
Trigger: CACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCGTCCTCATCTCGGATaGGCCGCCAGGTCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRPHLG*AARSCP
Trigger: CGGGCACGACCTGGCGGCGCATCCGAGATGAGGACG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCCGTGGCGGGAAGCGTaGTGCGCAGGATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPPWREA*CAGCGA
Trigger: TGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCGAATTACCGGCGGCTaGAGTGATTACAGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQARITGG*SDYRLR
Trigger: GCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTAC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPSRPGV*TRVPSY
Trigger: GTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVAAPPS*ITLALS
Trigger: TGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGGCTGGCAGCCATGTTaGGCACCTTGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRGWQPC*APCCWA
Trigger: TGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAAGTACAGGCCCACGTaGTGGTGGCCAGGCAATCCG +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVKYRPT*WWPGNP
Trigger: CGGATTGCCTGGCCACCACCACGTGGGCCTGTACTT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCCCAGGGTGGGCGGCTaGAACTTGAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQPRVGG*NLRLYR
Trigger: CCTGTACAACCTCAAGTTCCAGCCGCCCACCCTGGG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCCCCAAAGCTGTCCTTaGAGGGCCCGGAGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRPQSCP*RARSRV
Trigger: TACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGAGCTCTCGGGCGAGCTaGACATGGCCAGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESSRAS*TWPAAC
Trigger: GCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCT...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCTGTCGGAGGCCAGCTaGGCCACGATGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSLSEAS*ATMASM
Trigger: CATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCACGCTCTTCAGGGTaGACTCCTTGGTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRARSSG*TPWWPA
Trigger: TGCGGGCCACCAAGGAGTCCACCCTGAAGAGCGTGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGAGGGCGCCATCCACCTaGCAGATGGCCGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRAPST*QMAALF
Trigger: GAACAAGGCGGCCATCTGCCAGGTGGATGGCGCCCT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTGCTTGGCGGGCCGATaGGCCAGCAGGTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPCLAGR*ASRLRR
Trigger: CCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGGCTGCCTCCCCACTaGTGTCCTTCTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRRLPPH*CPSLPP
Trigger: AGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGAACCTTGCTCAGGTaGTCTGCCGGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWGTLLR*SAGSQA
Trigger: GGCCTGGCTGCCGGCAGACCACCTGAGCAAGGTTCC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCACGAGCTGGACGGCGTaGCGTCTTCCACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPTSWTA*RLPPPG
Trigger: GCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGT...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCCGCTGCAAGGTTCACTaGGGATGGAGCTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGARCKVH*GWSWRW
Trigger: CCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCG...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGGTGGGGCGGCCGGTaGGTCTTTGCCTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARWGGR*VFACPL
Trigger: CAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTGGCGCCCTCCTGGATaGCGCGCCACTCCACGCTAT +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGWRPPG*RATPRY
Trigger: ATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCACGGGGTGCCGGGCTaGGGACGTAGATCACTGTTC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEHGVPG*GRRSLF
Trigger: GAACAGTGATCTACGTCCCCAGCCCGGCACCCCGTG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGCGCGCCGGCGTTTTaGGCACCGGGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPCAPAF*APGRLR
Trigger: CCGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGGACGTGCTGGAGTTaGTCTTGGGGGCGGCGACCT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGTCWS*SWGRRP
Trigger: AGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGGACGTGCTGGAGTTaGTCTTGGGGGCGGCGACCT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGTCWS*SWGRRP
Trigger: AGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGAGCCTTGGCGAGGCTaGGACCGTCCACGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPEPWRG*DRPRRC
Trigger: GCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCGAAGGGTGCGGAGATaGGAGCCTTGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRRRVRR*EPWRGW
Trigger: CCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGGTGGGCAGAGGCCCTaGGGCGACCTATGGGGGACG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMGGQRP*GDLWGT
Trigger: CGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCTGCTTCGTTCCTCCTaGAGAAGGCACGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQLLRSS*RRHVGH
Trigger: ATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTCATCCGTGGTGGGGCTaGGGTTTCCTTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVHPWWG*GFLLSS
Trigger: GGAGCTCAGAAGGAAACCCCAGCCCCACCACGGATG...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQHLGDL*TSCLEL
Trigger: GAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTAT +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQPAPAG*HTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGG...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTTCCCCCTCGGGCCATaGATGGGGACAGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAFPLGP*MGTASV
Trigger: CACACTTGCTGTCCCCATCCATGGCCCGAGGGGGAA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCCAGCGACCTGGTGGCTaGCTTCGCCATTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRQRPGG*LRHFPT
Trigger: GGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTG...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCTCACCAGCGACCTGGTaGCTGGCTTCGCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASPATW*LASPFP
Trigger: GGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGLSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCTGCCTGTCCCCTTCTaGAGACAGCTGGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRLPVPF*RQLDWA
Trigger: CGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAGGGAGGCCTTGCAGTaGGCGTACCTTGAGTTGATT +
Preference number: 4 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVREALQ*AYLELI
Trigger: AATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCAGGCAGGGGCCGCGGTaGGAGGGAGGCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRQGPR*EGGLAV
Trigger: CACTGCAAGGCCTCCCTCCCACCGCGGCCCCTGCCT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTGGCCCTGGAGCATTaGGGGGCAGACGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLALEH*GADEDP
Trigger: GGGGTCCTCGTCTGCCCCCCAATGCTCCAGGGCCAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGATCAGGCTTGGGGTTaGGGGCTACACGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPDQAWG*GLHAGR
Trigger: TCTCCCTGCGTGTAGCCCCCAACCCCAAGCCTGATC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACTCCCTCTGTCCAGCTaGCCGGCGCCTCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALPLSS*PAPPPS
Trigger: CGAGGGAGGAGGCGCCGGCCAGCTGGACAGAGGGAG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGCTTCTTTGTGCCTCTaGCCGTCTTCTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQASLCL*PSSGSG
Trigger: GCCAGAGCCAGAAGACGGCCAGAGGCACAAAGAAGC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCACTCTGCCAGCGCGCTaGCTTCTTTGTGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPTLPAR*LLCASG
Trigger: GCCAGAGGCACAAAGAAGCCAGCGCGCTGGCAGAGT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCAGGCCCACGTGGTGGTaGCCAGGCAATCCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRPTWW*PGNPGR
Trigger: GCGCCCCGGATTGCCTGGCCACCACCACGTGGGCCT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
3UTR CAA 72 bp ACGGCGCCCCGAGTTCAGCACCCACGTGTGGTCATGTaGGGGGCCAGTGGCGGTCACTGTCCATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TAPRVQHPRVVM*GASGGHCPSAS
Trigger: TGAGGCTGATGGACAGTGACCGCCACTGGCCCCCAACATGACCACACGTGGGTGCTGAACTCGGGGCGCCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCGCCGCCGCTCTCGATaGTGGCCAGCGAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPRRRSR*WPASCS
Trigger: AGAGCAACTCGCTGGCCATCATCGAGAGCGGCGGCG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGGCCGCAGCCAGGGATaGCGGTGCATCGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARGRSQG*RCIVVV
Trigger: GACGACGACGATGCACCGTCATCCCTGGCTGCGGCC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACCTCAGTGGGCGTCGTaGGGCACAGCGACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAPQWAS*GTATGA
Trigger: CGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCCTCAGTGGGCGTCGTaGGGCACAGCGACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARPQWAS*GTATGA
Trigger: CGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGTCTCGTCAGCAATaGGGCTGGGCTGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGSRQQ*GWAGSG
Trigger: CCCGGACCCAGCCCAGCCTCATTGCTGACGAGACCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGGTCTCGTCAGCAATaGGGCTGGGCTGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGSRQQ*GWAGSG
Trigger: CCCGGACCCAGCCCAGCCTCATTGCTGACGAGACCC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATAGGGCTCGGGCTCGCTaGGGGAGCTGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHRARAR*GSWRRS
Trigger: GCTCCTCCGCCAGCTCCCTCAGCGAGCCCGAGCCCT...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTGGGCAGGGCCGAGCTaGTGCACCGCTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPWAGPS*CTAAEA
Trigger: AGCTTCTGCAGCGGTGCATCAGCTCGGCCCTGCCCA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCGCTGGTCTTGACTaGGGCTGCGCCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRPAGLD*GCAPFL
Trigger: GAGAAAAGGGGCGCAGCCTCAGTCAAGACCAGCGGG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGCCGCTGGAGAGGGCTaGGGCCACACGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIAAGEG*GHTHQA
Trigger: GGCCTGGTGCGTGTGGCCTCAGCCCTCTCCAGCGGC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRYRRLQ*LQASPL
Trigger: CAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTA...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGECSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGTGGGGACAGCAAGTGTaGGACCCCCGCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRWGQQV*DPRCVL
Trigger: CAGGACACAGCGGGGGTCTCACACTTGCTGTCCCCA...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGA +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGRTLS*LSRDRG
Trigger: TCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCAGCACTCGGGCCTCCTaGTCCAGTTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSTRAS*SSFPCR
Trigger: CCTACAGGGAAAACTGGAGCAGGAGGCCCGAGTGCT...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTAGGGCCTTCAGCTaGTCCAGCACCTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGECRAFS*SSTSVC
Trigger: GCAGACGGAGGTGCTGGAGCAGCTGAAGGCCCTACA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGAGCCGTGTACTGGGCTaGCCTCGGGGGTCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRSRVLG*PRGSGR
Trigger: CCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCCTCGAACTCAAGCTaGTGCCGGATCAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAASNSS*CRIRSI
Trigger: GATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCGGATCTGTGCCCGCTaGACCATCTCGTCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSRICAR*TISSEV
Trigger: CACCTCGGACGAGATGGTGCAGCGGGCACAGATCCG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCGAGGCGCGGATCTGTaGCCGCTGCACCATCTCGTC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRGADL*PLHHLV
Trigger: GACGAGATGGTGCAGCGGGCACAGATCCGCGCCTCG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAGACCACCTCCACCTTaGTGTTGCCCGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWRPPPP*CCPAEG
Trigger: CCCCTCAGCCGGGCAACAGCAAGGTGGAGGTGGTCT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGACATGGCCAGCAGCGTaGGCGCTGTATCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRTWPAA*ALYPPG
Trigger: ACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGGCCGCGGCCTCGGTaGCGTGGAGGATTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRPRPR*RGGFAA
Trigger: TGCTGCAAATCCTCCACGGCACCGAGGCCGCGGCCG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGAGGCCCTGGTCCGGCTaGGAGAAGACGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRPWSG*EKTMLC
Trigger: GCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGATCTGCTCCAGCACGTaGAGGACGCGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQICSST*RTRISL
Trigger: CAAGGAGATGCGCGTCCTGCACGTGCTGGAGCAGAT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCGCCGTCTCGGGCCTaGAGCCAGTCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPPSRA*SQSQQV
Trigger: GACCTGCTGGGACTGGCTGCAGGCCCGAGACGGCGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTAGCTCTGCCACGGCCTaGAGCCCACCTAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSSATA*SPPSSF
Trigger: GAACGAGCTAGGTGGGCTGCAGGCCGTGGCAGAGCT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGTTCTCTGTGCTGTGTaGAGACAGATTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PAAAVITGFAPARRKGPQVLCAV*RQIPQG
Trigger: GCCCTGTGGAATCTGTCTGCACACAGCACAGAGAAC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCAGGGCGGCGGCGCTaGCCATGGCGATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALAGRRR*PWRSSC
Trigger: ACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGCCATCTTCAGCTCCTaGAGCGTCCGCTTACGTGCA +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRAIFSS*SVRLRA
Trigger: TGCACGTAAGCGGACGCTGCAGGAGCTGAAGATGGC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGAACTGCGTCTCCACGTaGGGCAGCTCGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALNCVST*GSSSRR
Trigger: GCGCCTGGACGAGCTGCCGCACGTGGAGACGCAGTT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCCCTGCTTCTCCAGGTaGTCCAGCGCCTGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQPCFSR*SSACAR
Trigger: CCTCGCGCAGGCGCTGGAGCACCTGGAGAAGCAGGG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCCCTGCTTCTCCAGGTaGTCCAGCGCCTGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMPCFSR*SSACAR
Trigger: CCTCGCGCAGGCGCTGGAGCACCTGGAGAAGCAGGG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGTCGATGCGCGCCACTaGAAGCGCCAGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEVDARH*KRQLGL
Trigger: AAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGAC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCGCCAGTTTCTGCAGTaGCTTGCTGGCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGRQFLQ*LAGHRQ
Trigger: CTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGCGAGGAAAGGGAGCTaGATCGGGACAGCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEARKGS*IGTARV
Trigger: CACTCTCGCTGTCCCGATGCAGCTCCCTTTCCTCGC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGCCCTGCTCTGTTCTTaGCCGCGCCCCGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPALLCS*PRPETA
Trigger: AGCAGTCTCGGGGCGCGGGCAAGAACAGAGCAGGGC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGGGCAGCTCCAGCCCTaGTCTGTTCTTGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMGQLQP*SVLARA
Trigger: GGCGCGGGCAAGAACAGAGCAGGGCTGGAGCTGCCC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGCCTCCTTCCGGCCCTaGGGACGCTCCCGCGTAAAA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPASFRP*GRSRVK
Trigger: TTTTACGCGGGAGCGTCCGCAGGGCCGGAAGGAGGC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCTCCCGCGTGGCAGCTaGTGCCTGGTGCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARLPRGS*CLVQPR
Trigger: ACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCTCTGCGTCTTGTGCTaGTTCGCCAGAAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRLCVLC*FARRVR
Trigger: GCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGTCGGAGGACTCGCTaGCGCTGGAGAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQGRRTR*RWRGLR
Trigger: CCTCAGCCCTCTCCAGCGGCAGCGAGTCCTCCGACC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACGTCCTCATCTCGGATaGGCCGCCAGGTCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARPHLG*AARSCP
Trigger: CGGGCACGACCTGGCGGCGCATCCGAGATGAGGACG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGANTLQP*VHLPEG
Trigger: GCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGTCGTCGGCTCCCTCTaGAGGACGAGGCGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQVVGSL*RTRRCP
Trigger: GGGGCAACGCCTCGTCCTGCAGAGGGAGCCGACGAC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGATTTTCCCCGCTCTCTaGTCAGCCATCCATGACCCC +
Preference number: 4 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQIFPAL*SAIHDP
Trigger: GGGGTCATGGATGGCTGAGCAGAGAGCGGGGAAAAT...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGGCTGGCAGCCATGTTaGGCACCTTGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEGWQPC*APCCWA
Trigger: TGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTCTCTGTCTCCAGCTTaGACAGGTGGCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQASLSPA*TGGWSC
Trigger: ACAACTCCAGCCACCTGTCCAAGCTGGAGACAGAGA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCGCGCTGTATCCTCCTaGTCGCGCGTCGCCAACATG +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRRAVSS*SRVANM
Trigger: CATGTTGGCGACGCGCGACCAGGAGGATACAGCGCG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGATGCTGGACACCACCTaGTGGAGCTCCTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGMLDTT*WSSSLS
Trigger: CGACAGTGAGGAGCTCCACCAGGTGGTGTCCAGCAT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCAGGGCGCCATCCACCTaGCAGATGGCCGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGRAPST*QMAALF
Trigger: GAACAAGGCGGCCATCTGCCAGGTGGATGGCGCCCT...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGATGTCCTCCACCAGCTaGTCGATGCGCGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRMSSTS*SMRATA
Trigger: TGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACAT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGAGGCTGCCCACACCTaGGGTCCTCGCGGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPEAAHT*GPRGAK
Trigger: CTTCGCGCCGCGAGGACCCCAGGTGTGGGCAGCCTC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTCTGCAGTGCCTTGCTaGCCACAGACAGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESAVPC*PQTAGQ
Trigger: CTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGGATGGAGCTGGCGATaGACGGGCTCTCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRGWSWR*TGSRSC
Trigger: GCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCACTGGGGATGGAGCTaGCGATGGACGGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEHWGWS*RWTGSR
Trigger: TCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCTCCGGCTGGGAGGCATaGTCTGTCCGGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARSGWEA*SVRGCR
Trigger: CCGACAGCCCCGGACAGACCATGCCTCCCAGCCGGA...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTCCGGCTGGGAGGCATaGTCTGTCCGGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSGWEA*SVRGCR
Trigger: CCGACAGCCCCGGACAGACCATGCCTCCCAGCCGGA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATCTTTGCCTGCCCGCTaGTCCCCCGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASLPAR*SPGLVP
Trigger: AGGGACCAGCCCGGGGGACCAGCGGGCAGGCAAAGA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCCTGTCTGGCAGAGGTaGGGCGGCCGGTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALPVWQR*GGRWVF
Trigger: AAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGCCCCATGGCCTGTCTaGCAGAGGTGGGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHAPWPV*QRWGGR
Trigger: CCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGAATTGGCGCCCTCCTaGATGGCGCGCCACTCCACG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPELAPS*MARHST
Trigger: CGTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCATACGAAGGACAGGATaGAGTCGGACTCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGIRRTG*SRTRTR
Trigger: CCTCGTCCGAGTCCGACTCCATCCTGTCCTTCGTAT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGTGCTGCGCAGGATGTaGGGCACGTCCTCATCTCGG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSVLRRM*GTSSSR
Trigger: CCGAGATGAGGACGTGCCCCACATCCTGCGCAGCAC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCGTGGAGCCCCGCAGTaGCAGGGCCGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHRGAPQ*QGRGGK
Trigger: CTTCCCGCCACGGCCCTGCCACTGCGGGGCTCCACG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGAGCCTTGGCGAGGCTaGGACCGTCCACGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMEPWRG*DRPRRC
Trigger: GCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCGAAGGGTGCGGAGATaGGAGCCTTGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPRRVRR*EPWRGW
Trigger: CCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPWCHPW*GWGFLL
Trigger: CAGAAGGAAACCCCAGCCCCACCACGGATGACACCA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCTATGGACGTCCTGTCTaGAGCTCCTTGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGYGRPV*SSLSCR
Trigger: CCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATA...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGACCTCCAGCACCTGCTaGGTGGCACACCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWTSSTC*VAHLGD
Trigger: GTCACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCAGCGACCTGGTGGCTaGCTTCGCCATTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRQRPGG*LRHFPT
Trigger: GGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCTGCCTGTCCCCTTCTaGAGACAGCTGGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSLPVPF*RQLDWA
Trigger: CGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 72 bp ACCTCGGTGACTTATGGACGTCCTGTCTGGAGCTCCTaGTCCTGCAGGGTGTGGGCCCGGAGCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TSVTYGRPVWSS*SCRVWARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAAGGAGCTCCAGACAGGACGTCCATAAGTCACCGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCACCTTCTTGCTGTTaGTGTCGGCCCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRAPSCC*CRPSRT
Trigger: TGTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGCACCTTCTTGCTGTTaGTGTCGGCCCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEAPSCC*CRPSRT
Trigger: TGTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGTCTGCAGACAGTTGTaGTCCCGGAGCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSVCRQL*SRSTCL
Trigger: CAGGCAGGTGCTCCGGGATCACAACTGTCTGCAGAC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCCCGCTGGTCTTGACTaGGGCTGCGCCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALPAGLD*GCAPFL
Trigger: GAGAAAAGGGGCGCAGCCTCAGTCAAGACCAGCGGG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGCCTGCGGGCCACGCTaGTGTGCGGCAGCGACGCGT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPACGPR*CAAATR
Trigger: ACGCGTCGCTGCCGCACATCAGCGTGGCCCGCAGGC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCTCCACGGTCGGGACTTaGGGCCTAGCGGCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPSTVGT*GLAAAP
Trigger: CGGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGA...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGGGCTCCGGGTTCCCTaGACACCGTCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPGLRVP*TPSGRG
Trigger: GCCCCGCCCAGACGGTGTTCAGGGAACCCGGAGCCC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRAGVSF*APSTQP
Trigger: GGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTACAGCGGCCCTGAGTTaGGGACAGCTCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSTAALS*GQLLLP
Trigger: TGGCAGAAGGAGCTGTCCTCAACTCAGGGCCGCTGT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVAWGAA*HAFREA
Trigger: TGCTTCTCTGAATGCATGTCACGCTGCACCCCATGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTCAGGACCTCCTTCATaGCCGACGTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSGPPS*PTSLSP
Trigger: TGGAGACAGAGACGTCGGGCATGAAGGAGGTCCTGA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTCGAACTCAAGCTGCTaGCGGATCAGGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSNSSC*RIRSIC
Trigger: GCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCATCTCGTCCGAGGTaGCGAAGCGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRPSRPR*RSAPPS
Trigger: TGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGAGCTCCTTGTCAATCTaGTCCAGGCGCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALSSLSI*SRREAR
Trigger: CCGCGCCTCGCGCCTGGAGCAGATTGACAAGGAGCT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCGGCCGCGGCCTCGGTaGCGTGGAGGATTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPRPRPR*RGGFAA
Trigger: TGCTGCAAATCCTCCACGGCACCGAGGCCGCGGCCG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAGAAGACGATGTTGTaGAGCGCCGCGTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALEKTML*SAALAR
Trigger: GCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCCGCCGTCTCGGGCCTaGAGCCAGTCCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRPPSRA*SQSQQV
Trigger: GACCTGCTGGGACTGGCTGCAGGCCCGAGACGGCGG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAACCTGCAGCAGCTCTaGCACGGCCTGCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGANLQQL*HGLQPT
Trigger: GGTGGGCTGCAGGCCGTGGCAGAGCTGCTGCAGGTT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGCCCGCAGGACACACTaGACCAGGGCAGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMARRTH*TRAVTL
Trigger: CAGCGTGACTGCCCTGGTGCAGTGTGTCCTGCGGGC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCACAGGTTCCAGAGCGTaGCGCACGCGTTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGTGSRA*RTRCSR
Trigger: TCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGT...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCAACTGCGTCTCCACGTaGGGCAGCTCGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARNCVST*GSSSRR
Trigger: GCGCCTGGACGAGCTGCCGCACGTGGAGACGCAGTT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGAGCGCCTGCGCGAGGTaGCGTGCGTCCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPSACAR*RASSSA
Trigger: GGCCGAGCTGGACGCACGGCACCTCGCGCAGGCGCT...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGTGCGAGCCAGCGCCTaGCCCTGCAGGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRVRASA*PCRKGL
Trigger: CAGCCCCTTCCTGCAGGGGCAGGCGCTGGCTCGCAC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGTTTCTGCAGTGCCTTaGTGGCCACAGACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGVSAVP*WPQTAG
Trigger: CCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAAC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGAGAGTGGCCCCTCTTaGGCCGCCAGTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWESGPS*AASFCS
Trigger: ACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGCGAGCTCACAGAGCTaGAGCGGCTCAGCACAAGCG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPASSQS*SGSAQA
Trigger: CGCTTGTGCTGAGCCGCTGCAGCTCTGTGAGCTCGC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCGCTGCCCTGCCCGCTaGAAGGTTCACTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRCPAR*KVHWGW
Trigger: CCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCATGGTGCCGCTGCCCTaGCCGCTGCAAGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPMVPLP*PLQGSL
Trigger: CAGTGAACCTTGCAGCGGGCAGGGCAGCGGCACCAT...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCAGCGGTGGCGTCTTaGTCCGGCTGGGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPAVAS*SGWEAW
Trigger: CCATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTCCTCCCGCCGCCGGTaGCCTGCAAAGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYISSRRR*PAKWRP
Trigger: CGGCCTCCACTTTGCAGGGCACCGGCGGCGGGAGGA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCCGCCTTGTGCCGGTaGCCCATGGCCTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPALCR*PMACLA
Trigger: TGCCAGACAGGCCATGGGGCACCGGCACAAGGCGGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCGCCGGGCCGGCCTCTaGATGAACGGGATCCGCACG +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHRRAGL*MNGIRT
Trigger: CGTGCGGATCCCGTTCATGCAGAGGCCGGCCCGGCG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCGCCGGGCCGGCCTCTaGATGAACGGGATCCGCACG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIRRAGL*MNGIRT
Trigger: CGTGCGGATCCCGTTCATGCAGAGGCCGGCCCGGCG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCTCGCCCGCCGCGGCTaGGCCGGGCCGATACTGACT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPLARRG*AGPILT
Trigger: AGTCAGTATCGGCCCGGCGCAGCCGCGGCGGGCGAG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGGGTGCAGCGTGACATaGATTCAGAGAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GADEDPLSPWCREARWPGGCSVT*IQRSSS
Trigger: ACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGAAPPS*ITLALS
Trigger: TGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGC...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCATATGTGGAAGGCAATaGCGCACCACCTTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAICGRQ*RTTFLH
Trigger: ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATAT...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCATGTTGCGCACCTTaGTGCTGGGCAAGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRPCCAP*CWARRH
Trigger: GTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGTTCAGCTGATGGTCTaGGGAGGGCGCGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPVQLMV*GGRGDA
Trigger: GGCATCACCGCGCCCTCCCCAGACCATCAGCTGAAC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCCAGGGTGGGCGGCTaGAACTTGAGGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPRVGG*NLRLYR
Trigger: CCTGTACAACCTCAAGTTCCAGCCGCCCACCCTGGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCCTCCAGCAGCCGGATaGTGGCCCGGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHPPAAG*WPGSAP
Trigger: GGGAGCTGAGCCGGGCCACCATCCGGCTGCTGGAGG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAGCGAGCGGATGTGCTaGGCCTCGAACTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWSERMC*ASNSSC
Trigger: GCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGTGCAGCGCCGCGTTaGCGCGCATGCGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPCAAPR*RACVRP
Trigger: AGGACGCACGCATGCGCGCCAACGCGGCGCTGCACA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTACAGCACAGGTGGCCTaGCAGATCTGCGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSTAQVA*QICGSM
Trigger: CATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCACCTAGCTCGTTCATaGCACGGCGGTACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPHLARS*HGGTPH
Trigger: ATGAGGAGTACCGCCGTGCCATGAACGAGCTAGGTG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACTGTCGGAGGCCAGCTaGGCCACGATGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALSEAS*ATMASM
Trigger: CATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCTGGACACCACCTGGTaGAGCTCCTCACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWLDTTW*SSSLSE
Trigger: CTCCGACAGTGAGGAGCTCCACCAGGTGGTGTCCAG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCTGGACACCACCTGGTaGAGCTCCTCACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGLDTTW*SSSLSE
Trigger: CTCCGACAGTGAGGAGCTCCACCAGGTGGTGTCCAG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGATGCTGGACACCACCTaGTGGAGCTCCTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRMLDTT*WSSSLS
Trigger: CGACAGTGAGGAGCTCCACCAGGTGGTGTCCAGCAT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGTTCCGAAGGATGCTaGACACCACCTGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSSEGC*TPPGGA
Trigger: AGCTCCACCAGGTGGTGTCCAGCATCCTTCGGAACT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAGTTCCGAAGGATGCTaGACACCACCTGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSSEGC*TPPGGA
Trigger: AGCTCCACCAGGTGGTGTCCAGCATCCTTCGGAACT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTCAGGGTGGACTCCTTaGTGGCCCGCAGGACACACT +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSGWTP*WPAGHT
Trigger: AGTGTGTCCTGCGGGCCACCAAGGAGTCCACCCTGA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGTGTAGTCCTCACGGGTaGCGACGAGGCTGGACACAT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRCSPHG*RRGWTH
Trigger: ATGTGTCCAGCCTCGTCGCCACCCGTGAGGACTACA...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCGGCGGCGCTGCCCATaGCGATCATCTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRRRCP*RSSCAW
Trigger: CCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGCTTGGCCTTGGCCTTaGCCGCCACGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHAWPWP*PPRLPP
Trigger: GGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGAGGCTGCCCACACCTaGGGTCCTCGCGGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIEAAHT*GPRGAK
Trigger: CTTCGCGCCGCGAGGACCCCAGGTGTGGGCAGCCTC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCAAGGTCAAGCCGGCTaGGCCGAGGCTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPQGQAG*AEAAHT
Trigger: GGTGTGGGCAGCCTCGGCCCAGCCGGCTTGACCTTG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGCCCCATGGCCTGTCTaGCAGAGGTGGGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPAPWPV*QRWGGR
Trigger: CCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGTCGCGTCCGCCTCCTaGGCCCGGGTCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIVASAS*ARVLGD
Trigger: GTCACCAAGGACCCGGGCCCAGGAGGCGGACGCGAC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGCTCATCCAGCCGGGTaGCTCGGGGCTTGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPAHPAG*LGACGA
Trigger: GGCGCCGCAAGCCCCGAGCCACCCGGCTGGATGAGC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTACGAGGCCTCCCGCGTaGCAGCTGCTGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPTRPPA*QLLPGA
Trigger: TGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGT...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCATACGAAGGACAGGATaGAGTCGGACTCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRIRRTG*SRTRTR
Trigger: CCTCGTCCGAGTCCGACTCCATCCTGTCCTTCGTAT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCACGGGCTCTCGGAGGTaGTGCGCCGGGCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPTGSRR*CAGQGA
Trigger: AGCGCCCTGCCCGGCGCACCACCTCCGAGAGCCCGT...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTGCTGGAGTTGGTCTTaGGGGCGGCGACCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMCWSWS*GRRPPR
Trigger: CCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGAGGTCGCCGTGCGCTaGGCGGGGGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPEVAVR*AGVLRV
Trigger: CACTCTCAGAACCCCCGCCCAGCGCACGGCGACCTC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCACCCCCACCCTTTTaGGCTCCGCCGGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPPPPF*APPERL
Trigger: CAAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWRVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPGEGT*GIERVP
Trigger: AGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTTCTGCCAGAAAGGCTaGCCTTGCCCATGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRFCQKG*PCPCWG
Trigger: TCCCCAGCATGGGCAAGGCCAGCCTTTCTGGCAGAA...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATTGTCCTGCAGGGTGTaGGCCCGGAGCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALSCRV*ARSMGC
Trigger: GCACCCCATGCTCCGGGCCCACACCCTGCAGGACAA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPRREH*APPAPA
Trigger: AGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCAGCGACCTGGTGGCTaGCTTCGCCATTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWQRPGG*LRHFPT
Trigger: GGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTGGAGACAGCTGGACTaGGCGGTGAGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEWRQLD*AVRCGC
Trigger: ACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCACGTGTGGTCATGTTaGGGGCCAGTGGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEHVWSC*GPVAVT
Trigger: AGTGACCGCCACTGGCCCCCAACATGACCACACGTG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTACAGAAACGTGGGGTaGCGGCTAGGGGAATCAGAC +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPYRNVG*RLGESD
Trigger: GTCTGATTCCCCTAGCCGCCACCCCACGTTTCTGTA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGGAGACCCTGGGGTCTaGCTCGAGCCCCATGTTCCA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPGDPGV*LEPHVP
Trigger: TGGAACATGGGGCTCGAGCCAGACCCCAGGGTCTCC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAGTGGGGATCAGGCTTaGGGTTGGGGGCTACACGCA +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWSGDQA*GWGLHA
Trigger: TGCGTGTAGCCCCCAACCCCAAGCCTGATCCCCACT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACTGGGAAGTCCAGGCTaGAGGCCCGACAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALGSPG*RPDKTR
Trigger: GCGGGTCTTGTCGGGCCTCCAGCCTGGACTTCCCAG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTGGCACTGCCGCTGTTaGGGCTGTCGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQWHCRC*GCRWRG
Trigger: GCCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATTCTCCCACTGCAGGCTaGACTGGGTGGCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHSPTAG*TGWPRG
Trigger: CCCCCGAGGCCACCCAGTTCAGCCTGCAGTGGGAGA...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCTGGTGCAGCCACGTaGCAATTGAATTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWPGAAT*QLNWRP
Trigger: AGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCTGGTGCAGCCACGTaGCAATTGAATTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRPGAAT*QLNWRP
Trigger: AGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGGCAAGGTCTTCCGGTaGGGCGCGAGGTCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPGKVFR*GARSPC
Trigger: GCACGGCGACCTCGCGCCTCACCGGAAGACCTTGCC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTGCGGTCCTGGGCACTaGCCACGCCCACATGTGATG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMCGPGH*PRPHVM
Trigger: CATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCTGCGGTCCTGGGCACTaGCCACGCCCACATGTGATG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARCGPGH*PRPHVM
Trigger: CATCACATGTGGGCGTGGTCAGTGCCCAGGACCGCA...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHTPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGACCCCCGCTGTGTCCTaGAAGGGGGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRTPAVS*KGAPGR
Trigger: CCTGCCAGGAGCCCCCTTTCAGGACACAGCGGGGGT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGA +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRGRTLS*LSRDRG
Trigger: TCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTGCGAGTCGGACAGCTaGCGGTGTCGTCCTTACGCC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMCESDS*RCRPYA
Trigger: GGCGTAAGGACGACACCGTCAGCTGTCCGACTCGCA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTTGTCCCTTAGCTCCTaGCTCAGGTGGCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGLSLSS*LRWLFS
Trigger: TGAGAACAGCCACCTGAGGCAGGAGCTAAGGGACAA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCCTCGAACTCAAGCTaGTGCCGGATCAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWASNSS*CRIRSI
Trigger: GATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCATCAGCGAGCGGATGTaGTGGGCCTCGAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGISERM*WASNSS
Trigger: GCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGAT...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGACGATGGTCAGGCTGTaGGAAGTCAGATGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGETMVRL*EVRCCS
Trigger: GCTGCAGCATCTGACTTCGCACAGCCTGACCATCGT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGTGCCGCACGCGTTaGTCACGATGGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAACRTR*SRWSGC
Trigger: ACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCGTGCCGCACGCGTTaGTCACGATGGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQACRTR*SRWSGC
Trigger: ACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCAGCGTCCGCTTACGTaGAGCTGGGCTGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPQRPLT*SWAGGA
Trigger: CGCCCCGCCAGCCCAGCTGCACGTAAGCGGACGCTG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCTGCGCGAGGTGCCGTaGGTCCAGCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPLREVP*VQLGLQ
Trigger: CTGGAGGCCGAGCTGGACGCACGGCACCTCGCGCAG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCTTGGCCGCCACGGCTaGCTCCCCACTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPLGRHG*LPTGVL
Trigger: AAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCGCCAGTTTCTGCAGTaGCTTGCTGGCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWRQFLQ*LAGHRQ
Trigger: CTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTCCTCCCGCCGCCGGTaGCCTGCAAAGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPSSRRR*PAKWRP
Trigger: CGGCCTCCACTTTGCAGGGCACCGGCGGCGGGAGGA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGAGCTGATGCACCGCTaGAGAAGCTCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPELMHR*RSSSAA
Trigger: GGCCGCGGAGGAGCTTCTGCAGCGGTGCATCAGCTC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTTCCCGGGACCCCTCTaGGGGCCGCTCATCCAGCCG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPFPGPL*GPLIQP
Trigger: CGGCTGGATGAGCGGCCCGCAGAGGGGTCCCGGGAA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGCAGCTGCTGCCTGGTaGAGCCACGTGACAATTGAA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRAAAAW*SHVTIE
Trigger: TTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTACAGGCTTCGCCCCTaGGCGCCGCAAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIYRLRP*APQRPP
Trigger: TGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRNTLQP*VHLPEG
Trigger: GCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATT...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCTGTTGCGCACCTTGCTaGTGGGCAAGGCGTCACGGG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARCCAPC*WARRHG
Trigger: CCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACA...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGTGGGAGGGAGGCCTTaGAGTGGGCGTACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPVGGRP*SGRTLS
Trigger: ACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGACGCAGTGTGTGGCTTaGCATGTCATCCGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRTQCVA*HVIRLL
Trigger: AAGGAGCCGGATGACATGGCAAGCCACACACTGCGT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCATCCTCAGGGTGTGTaGGGACCTCTGTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPHPQGV*GPLSRG
Trigger: ACCCCGAGACAGAGGTCCCCACACACCCTGAGGATG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCGCGCGTCGCCAACATaGACAACAGCCAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGRASPT*TTARRP
Trigger: TGGTCTTCTGGCTGTTGTCCATGTTGGCGACGCGCG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCGCGCTGTATCCTCCTaGTCGCGCGTCGCCAACATG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMRAVSS*SRVANM
Trigger: CATGTTGGCGACGCGCGACCAGGAGGATACAGCGCG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTTGCGCGCCAGGCCCTaGTCCGGCTGCGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYILRARP*SGCEKT
Trigger: CGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCACCTAGCTCGTTCATaGCACGGCGGTACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRHLARS*HGGTPH
Trigger: ATGAGGAGTACCGCCGTGCCATGAACGAGCTAGGTG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCTGGACACCACCTGGTaGAGCTCCTCACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPLDTTW*SSSLSE
Trigger: CTCCGACAGTGAGGAGCTCCACCAGGTGGTGTCCAG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGTGGCGACGAGGCTaGACACATTGCGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGWRRG*THCGGC
Trigger: GCATCCTCCGCAATGTGTCCAGCCTCGTCGCCACCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATTGCTTGGCGGGCCGATaGGCCAGCAGGTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHCLAGR*ASRLRR
Trigger: CCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCA...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGGCTGCCTCCCCACTaGTGTCCTTCTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRLPPH*CPSLPP
Trigger: AGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCAGTTCTCCGACGAGCTaGACGGCGTGGCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPSSPTS*TAWRLP
Trigger: TGGAAGACGCCACGCCGTCCAGCTCGTCGGAGAACT...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGAAGGTTCACTGGGGATaGAGCTGGCGATGGACGGGC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALKVHWG*SWRWTG
Trigger: GCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCGAGAAGTTCTCGTCTaGCTTCTCCACGGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPREVLV*LLHGKA
Trigger: CGCTTTACCGTGGAGAAGCCAGACGAGAACTTCTCG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCACGGGGTGCCGGGCTaGGGACGTAGATCACTGTTC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMHGVPG*GRRSLF
Trigger: GAACAGTGATCTACGTCCCCAGCCCGGCACCCCGTG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGCAGTGGCAGGGCCGTaGCGGGAAGCGTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPAVAGP*REACCA
Trigger: TGCGCAGCACGCTTCCCGCCACGGCCCTGCCACTGC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGCAGTGGCAGGGCCGTaGCGGGAAGCGTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPAVAGP*REACCA
Trigger: TGCGCAGCACGCTTCCCGCCACGGCCCTGCCACTGC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGAAGGCAGCGCCTGCTaGAGCTTTTCTGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVEGSAC*SFSAEK
Trigger: CTTTTCTGCAGAAAAGCTCCAGCAGGCGCTGCCTTC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCGAAGGCAGCGCCTGCTaGAGCTTTTCTGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRREGSAC*SFSAEK
Trigger: CTTTTCTGCAGAAAAGCTCCAGCAGGCGCTGCCTTC...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGCGTGTGCCTTCAGCCTaGGCAGATCCGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRVPSA*ADPWVK
Trigger: CTTCACCCACGGATCTGCCCAGGCTGAAGGCACACG...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCCAGCACCTGCTGGGTaGCACACCTCGGTGACTTAT +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGPAPAG*HTSVTY
Trigger: ATAAGTCACCGAGGTGTGCCACCCAGCAGGTGCTGG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCCTGACAGCCTTGCCTaGCTGCGAGGTCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMPDSLA*LRGPRR
Trigger: CCTCCTAGGACCTCGCAGCCAGGCAAGGCTGTCAGG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRHFPTL*QLGAQR
Trigger: CCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRHFPTL*QLGAQR
Trigger: CCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATACAGAGGCAGGGAGCTaGGAGGGCGCCGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHTEAGS*EGAAQR
Trigger: TCTCTGGGCGGCGCCCTCCCAGCTCCCTGCCTCTGT...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGGTGAGGTGTGGCTGTaGCCCCCACGGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIGEVWL*PPRQGM
Trigger: CATCCCCTGCCGTGGGGGCCACAGCCACACCTCACC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAGGGAGGCCTTGCAGTaGGCGTACCTTGAGTTGATT +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQREALQ*AYLELI
Trigger: AATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGACCCCTTGTCACCCTaGTGCAGAGAGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGADPLSP*CREARW
Trigger: CCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCATGTTGGGGGCCAGTaGCGGTCACTGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPHVGGQ*RSLSIS
Trigger: GCTGATGGACAGTGACCGCCACTGGCCCCCAACATG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGGAGGACCATGCCGGTaGGCACGGCGCCCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPGGPCR*ARRPEF
Trigger: GAACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
3UTR CAA 72 bp GGTGGGAGGGAGGCCTTGCAGTGGGCGTACCTTGAGTaGATTGTCCAGAGACCGCGGACTGCCTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GGREALQWAYLE*IVQRPRTACPL
Trigger: AAGGGGACAGGCAGTCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGTCAGAGGGTTCAGCTaGTGGTCTGGGGAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIVRGFS*WSGEGA
Trigger: CGCGCCCTCCCCAGACCATCAGCTGAACCCTCTGAC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGGTTGTACAGGCTGGTaGTGTCCATCTGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSGCTGW*CPSVGP
Trigger: AGGCCCTACAGATGGACATCACCAGCCTGTACAACC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPYRRLQ*LQASPL
Trigger: CAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTGCTCACAGCGGCCCTaGGTTGAGGACAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQCSQRP*VEDSSF
Trigger: GAAGGAGCTGTCCTCAACTCAGGGCCGCTGTGAGCA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSAWGAA*HAFREA
Trigger: TGCTTCTCTGAATGCATGTCACGCTGCACCCCATGC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCAGACCCAAGTTCTGTaGGCTTCCAGGCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARQTQVL*ASRRLP
Trigger: GGGGAGACGCCTGGAAGCTCACAGAACTTGGGTCTG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGCGAGTCGGACAGCTaGCGGTGTCGTCCTTACGCC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPCESDS*RCRPYA
Trigger: GGCGTAAGGACGACACCGTCAGCTGTCCGACTCGCA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGGTGGAAGGACCAGATaGCGTGCAAAGCAACACATG +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRGGRTR*RAKQHM
Trigger: CATGTGTTGCTTTGCACGTCATCTGGTCCTTCCACC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCCTGCCGATGGACAATaGAAACACCACGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSPADGQ*KHHEGQ
Trigger: CTGGCCTTCGTGGTGTTTTCATTGTCCATCGGCAGG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTCAGGACCTCCTTCATaGCCGACGTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSGPPS*PTSLSP
Trigger: TGGAGACAGAGACGTCGGGCATGAAGGAGGTCCTGA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTCAGGACCTCCTTCATaGCCGACGTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSGPPS*PTSLSP
Trigger: TGGAGACAGAGACGTCGGGCATGAAGGAGGTCCTGA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTAGCTCCTTGTCAATCTaGTCCAGGCGCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPSSLSI*SRREAR
Trigger: CCGCGCCTCGCGCCTGGAGCAGATTGACAAGGAGCT...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGACATGGCCAGCAGCGTaGGCGCTGTATCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQTWPAA*ALYPPG
Trigger: ACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGCCATCTTCAGCTCCTaGAGCGTCCGCTTACGTGCA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPAIFSS*SVRLRA
Trigger: TGCACGTAAGCGGACGCTGCAGGAGCTGAAGATGGC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGTCGATGCGCGCCACTaGAAGCGCCAGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPVDARH*KRQLGL
Trigger: AAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGAC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGTTTCTGCAGTGCCTTaGTGGCCACAGACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARVSAVP*WPQTAG
Trigger: CCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAAC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGCCCTGCTCTGTTCTTaGCCGCGCCCCGAGACTGCT +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRALLCS*PRPETA
Trigger: AGCAGTCTCGGGGCGCGGGCAAGAACAGAGCAGGGC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGCAGCTGCTGCCTGGTaGAGCCACGTGACAATTGAA +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEAAAAW*SHVTIE
Trigger: TTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCCGCGTGGCAGCTGCTaGCTGGTGCAGCCACGTGAC +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPPRGSC*LVQPRD
Trigger: GTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGCTTCGCCAGAAGGGTaGGCGCCGGCGTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRASPEG*APAFWA
Trigger: TGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTACCCCCAGGCCCTCGTaGACGAAGGGTGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYITPRPS*TKGAEM
Trigger: CATCTCCGCACCCTTCGTGCACGAGGGCCTGGGGGT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTAC +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPSRPGV*TRVPSY
Trigger: GTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGGGCCTAGCGCTTTATaGATCATGAACCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAGPSAL*IMNQKG
Trigger: TCCCTTCTGGTTCATGATGCATAAAGCGCTAGGCCC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATTGCAGGACGAGGCGTTaGCCCAGTCACGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHCRTRR*PSHGDP
Trigger: CGGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCA...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGGCTGGCCTTGCCCATaGTGGGGATGGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPGWPCP*WGWDGR
Trigger: CCTCCCGTCCCATCCCCAGCATGGGCAAGGCCAGCC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGGGGTGCAGCGTGACATaGATTCAGAGAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRGCSVT*IQRSSS
Trigger: ACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCC...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGGCACCTCCAGCACCTaGTGGGTGGCACACCTCGGT +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIGTSST*WVAHLG
Trigger: ACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTATTTTCCCCGCTCTCTaGTCAGCCATCCATGACCCC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSIFPAL*SAIHDP
Trigger: GGGGTCATGGATGGCTGAGCAGAGAGCGGGGAAAAT...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQSPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCCATGTTGCGCACCTTaGTGCTGGGCAAGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARPCCAP*CWARRH
Trigger: GTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATAGCTCTCGGGCGAGCTaGACATGGCCAGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHSSRAS*TWPAAC
Trigger: GCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCT...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGACAGCACAGGTGGCCTaGCAGATCTGCGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMTAQVA*QICGSM
Trigger: CATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGT...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTCAGGGTGGACTCCTTaGTGGCCCGCAGGACACACT +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSGWTP*WPAGHT
Trigger: AGTGTGTCCTGCGGGCCACCAAGGAGTCCACCCTGA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTGTAGTCCTCACGGGTaGCGACGAGGCTGGACACAT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPCSPHG*RRGWTH
Trigger: ATGTGTCCAGCCTCGTCGCCACCCGTGAGGACTACA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGACGCGTTGCTCACGATaGTCAGGCTGTGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWTRCSR*SGCAKS
Trigger: TGACTTCGCACAGCCTGACCATCGTGAGCAACGCGT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCTGCGCACGTACAGGCTaGGCACGCAGCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPCARTG*ARSCLG
Trigger: CCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCA...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCAGCATATGTTCGCGTaGGCAGTACCCGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARQHMFA*AVPVAG
Trigger: GCCAGCGACGGGTACTGCCCACGCGAACATATGCTG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCAAGGTCAAGCCGGCTaGGCCGAGGCTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPQGQAG*AEAAHT
Trigger: GGTGTGGGCAGCCTCGGCCCAGCCGGCTTGACCTTG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTCTGCAGTGCCTTGCTaGCCACAGACAGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPSAVPC*PQTAGQ
Trigger: CTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTCGGGACAGCGAGAGTaGCCCCTCTTGCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPSGQRE*PLLRRQ
Trigger: CTGGCGGCGCAAGAGGGGCCACTCTCGCTGTCCCGA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGAGTTCTCCGACGAGCTaGACGGCGTGGCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSSPTS*TAWRLP
Trigger: TGGAAGACGCCACGCCGTCCAGCTCGTCGGAGAACT...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTCTTTGCCTGCCCGCTaGTCCCCCGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPSLPAR*SPGLVP
Trigger: AGGGACCAGCCCGGGGGACCAGCGGGCAGGCAAAGA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCCAGCTCCGAGGTCTTaGCAGGCCGGTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIPAPRS*QAGVGS
Trigger: GGAGCCTACACCGGCCTGCCAAGACCTCGGAGCTGG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCGGAGATGGGAGCCTTaGCGAGGCTGGGACCGTCCA +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIRRWEP*RGWDRP
Trigger: TGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATACTATTCCAGGAGGGTaGCGGAGGCAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHTIPGG*RRQWPG
Trigger: CCCCGGCCACTGCCTCCGCCACCCTCCTGGAATAGT...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGCAGCGGTGCGGTCCTaGGCACTGACCACGCCCACA +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPAAVRS*ALTTPT
Trigger: TGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMPGEGT*GIERVP
Trigger: AGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEHLGDL*TSCLEL
Trigger: GAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMPRREH*APPAPA
Trigger: AGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCATTTCCCTACCCTTTaGCAATTAGGGGCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWHFPTL*QLGAQR
Trigger: CCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGGTGGGAGGCGGGGCTaGCAGCCATGTTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPGGRRG*QPCCAP
Trigger: AGGTGCGCAACATGGCTGCCAGCCCCGCCTCCCACC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATGGAGACAGCTGGACTaGGCGGTGAGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAWRQLD*AVRCGC
Trigger: ACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCTGCCTGTCCCCTTCTaGAGACAGCTGGACTGGGCG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPLPVPF*RQLDWA
Trigger: CGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGACCCCTTGTCACCCTaGTGCAGAGAGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPDPLSP*CREARW
Trigger: CCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCTAGGAACCGAGGTCTaGCACCCAGATGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARLGTEV*HPDAAP
Trigger: TGGGGCAGCATCTGGGTGCCAGACCTCGGTTCCTAG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGACGACCCTCCATCGGTaGCTGAGCTCAGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQTTLHR*LSSGWL
Trigger: TAGCCACCCTGAGCTCAGCCACCGATGGAGGGTCGT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCTCTGCACCCGCCCTTaGGGCACCCTCAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPLCTRP*GTLKQW
Trigger: CCACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCAGCCACGTGACAATTaGATTGGCGCCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPQPRDN*IGALLD
Trigger: ATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACCTGGTGCAGCCACGTaGCAATTGAATTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAPGAAT*QLNWRP
Trigger: AGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGGCCGGCCTCTGCATaGACGGGATCCGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITGPASA*TGSARA
Trigger: CGCCCGTGCGGATCCCGTTCATGCAGAGGCCGGCCC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGGTGGCACACCTCGGTaGCTTATGGACGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMGGTPR*LMDVLS
Trigger: AGACAGGACGTCCATAAGTCACCGAGGTGTGCCACC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGGCGTACCTTGAGTTaGTTGTCCAGAGACCGCGGA +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGRTLS*LSRDRG
Trigger: TCCGCGGTCTCTGGACAATCAACTCAAGGTACGCCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCCATCTTCAGCTCCTaGAGCGTCTGGGATCACAGG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQAIFSS*SVWDHR
Trigger: CCTGTGATCCCAGACGCTGCAGGAGCTGAAGATGGC...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGAGCACTCGGGCCTCCTaGTCCAGTTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQSTRAS*SSFPCR
Trigger: CCTACAGGGAAAACTGGAGCAGGAGGCCCGAGTGCT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGCACTCGGGCCTCCTaGTCCAGTTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASTRAS*SSFPCR
Trigger: CCTACAGGGAAAACTGGAGCAGGAGGCCCGAGTGCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGTCGAACTCAAGCTGCTaGCGGATCAGGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALSNSSC*RIRSIC
Trigger: GCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGA...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGATCAGCGAGCGGATGTaGTGGGCCTCGAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQISERM*WASNSS
Trigger: GCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGAT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCCTCCACCTTGCTGTTaGCCGGCTGAGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIPPPCC*PAEGCH
Trigger: ATGGCACCCCTCAGCCGGGCAACAGCAAGGTGGAGG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGAGAAGACGATGTTGTaGAGCGCCGCGTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIREKTML*SAALAR
Trigger: GCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGCCCGCAGGACACACTaGACCAGGGCAGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPARRTH*TRAVTL
Trigger: CAGCGTGACTGCCCTGGTGCAGTGTGTCCTGCGGGC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCCGCCTTGTTCTCTGTaGTGTGTGCAGACAGATTCC +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSPPCSL*CVQTDS
Trigger: GGAATCTGTCTGCACACAGCACAGAGAACAAGGCGG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTACAGGTTCCAGAGCGTaGCGCACGCGTTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPTGSRA*RTRCSR
Trigger: TCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGT...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGATCTTGTGCTTGGAGTaGACCAGATTACGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQILCLE*TRLRSM
Trigger: CATGCTGCGTAATCTGGTGCACTCCAAGCACAAGAT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGATGGGCCAGCAGGTTaGGCAGGGCGGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITDGPAG*AGRRRC
Trigger: GCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCTTGGCCGCCACGGCTaGCTCCCCACTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPLGRHG*LPTGVL
Trigger: AAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCCACCAGCTGGTCGATaGGCGCCACTGCAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPPPAGR*APLQAP
Trigger: TGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCGCTGCCCTGCCCGCTaGAAGGTTCACTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPRCPAR*KVHWGW
Trigger: CCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTATGGTGCCGCTGCCCTaGCCGCTGCAAGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIMVPLP*PLQGSL
Trigger: CAGTGAACCTTGCAGCGGGCAGGGCAGCGGCACCAT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACGGCCGGTGGGTCTTTaGCTGCCCGCTGGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITRPVGL*LPAGPP
Trigger: CGGGGGACCAGCGGGCAGGCAAAGACCCACCGGCCG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCTCGTGCACGAAGGGTaGGGAGATGGGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHLVHEG*GDGSLG
Trigger: GCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGGCCAGGACGCCCTTaGCAGCGCTCCACGGTCGGG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITGPGRP*QRSTVG
Trigger: CCCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCTGCTGGAGCTTTTCTaGAGAAAAGAGGTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGLLELF*RKEVVG
Trigger: GCCGACGACCTCTTTTCTGCAGAAAAGCTCCAGCAG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCCAACCCTCAAACCCTaGTTCGTTCCTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSPTLKP*FVPPGE
Trigger: TTCTCCAGGAGGAACGAAGCAGGGTTTGAGGGTTGG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGGCACCTCCAGCACCTaGTGGGTGGCACACCTCGGT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPGTSST*WVAHLG
Trigger: ACCGAGGTGTGCCACCCAGCAGGTGCTGGAGGTGCC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCCGCACCACCTTCCTaGATAACCCTGGCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPAAPPS*ITLALS
Trigger: TGACAGGGCCAGGGTTATGCAGGAAGGTGGTGCGGC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGGCTGGCAGCCATGTTaGGCACCTTGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHGWQPC*APCCWA
Trigger: TGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCTGGCACCCAGATGCTaGCCCAGAGGGGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPLAPRC*PRGAGK
Trigger: CTTCCCAGCCCCTCTGGGGCAGCATCTGGGTGCCAG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACCCGGAGCCGTGTACTaGGCTGCCCTCGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITPGAVY*AALGGP
Trigger: CGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTAGCGAGCGGATGTGCTaGGCCTCGAACTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPSERMC*ASNSSC
Trigger: GCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCT...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGACCGCCAGCAAGGCCTaGGGCTCCGTCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPTASKA*GSVCCT
Trigger: AGTGCAGCAGACGGAGCCCCAGGCCTTGCTGGCGGT...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCATCCTCAGGGTGTGTaGGGACCTCTGTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPHPQGV*GPLSRG
Trigger: ACCCCGAGACAGAGGTCCCCACACACCCTGAGGATG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATAGGGCGCCATCCACCTaGCAGATGGCCGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHRAPST*QMAALF
Trigger: GAACAAGGCGGCCATCTGCCAGGTGGATGGCGCCCT...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTGTAGTCCTCACGGGTaGCGACGAGGCTGGACACAT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQCSPHG*RRGWTH
Trigger: ATGTGTCCAGCCTCGTCGCCACCCGTGAGGACTACA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTATGTCCTCCACCAGCTaGTCGATGCGCGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPMSSTS*SMRATA
Trigger: TGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACAT...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGGCACCCTCAAGCAGTaGCACGTGCTGATAGGTAGG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAGTLKQ*HVLIGR
Trigger: CCTACCTATCAGCACGTGCCACTGCTTGAGGGTGCC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTAGTTCTCCGACGAGCTaGACGGCGTGGCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPSSPTS*TAWRLP
Trigger: TGGAAGACGCCACGCCGTCCAGCTCGTCGGAGAACT...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCGAGAAGTTCTCGTCTaGCTTCTCCACGGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEREVLV*LLHGKA
Trigger: CGCTTTACCGTGGAGAAGCCAGACGAGAACTTCTCG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGATACGAAGGACAGGATaGAGTCGGACTCGGACGAGG +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALIRRTG*SRTRTR
Trigger: CCTCGTCCGAGTCCGACTCCATCCTGTCCTTCGTAT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCTGGCACCCCGGGCGTaGTCTTCTGTGTGCCACGTG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPLAPRA*SSVCHV
Trigger: CACGTGGCACACAGAAGACCACGCCCGGGGTGCCAG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGCATCTCCTCTGGGATaGGGTCCAAATGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARASPLG*GPNVSR
Trigger: CCGGCTGACATTTGGACCCCATCCCAGAGGAGATGC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCTGCTTCGTTCCTCCTaGAGAAGGCACGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQLLRSS*RRHVGH
Trigger: ATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTATGGGACGGGAGGGATaGTGTCATCCGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIMGREG*CHPWWG
Trigger: GCCCCACCACGGATGACACCATCCCTCCCGTCCCAT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGTGCCCATGCTGGGGATaGGACGGGAGGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRCPCWG*DGRDGV
Trigger: GACACCATCCCTCCCGTCCCATCCCCAGCATGGGCA...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCTAGGAGGGAGCATTaGGCACCTCCAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPRREH*APPAPA
Trigger: AGCAGGTGCTGGAGGTGCCCAATGCTCCCTCCTAGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCTGTCACCAGCGACCTaGTGGCTGGCTTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARLSPAT*WLASPF
Trigger: AAATGGCGAAGCCAGCCACCAGGTCGCTGGTGACAG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTACAGAAACGTGGGGTaGCGGCTAGGGGAATCAGAC +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPYRNVG*RLGESD
Trigger: GTCTGATTCCCCTAGCCGCCACCCCACGTTTCTGTA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTCTCAGACGCACCAATaGCAGCCCATCCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQSQTHQ*QPIPLP
Trigger: TGGCAGAGGGATGGGCTGCCATTGGTGCGTCTGAGA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGCCGTCTTCTGGCTCTaGCCTGGCCTCCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPAVFWL*PGLLPL
Trigger: CAGAGGGAGGAGGCCAGGCCAGAGCCAGAAGACGGC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGAAACACACAGACAGCTaGGACAGCCTAACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRKHTDS*DSLTQQ
Trigger: TTGCTGGGTTAGGCTGTCCCAGCTGTCTGTGTGTTT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGCTGGGGTTTCCTTCTaGGCTCCATCCACCCAACCC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRAGVSF*APSTQP
Trigger: GGGTTGGGTGGATGGAGCTCAGAAGGAAACCCCAGC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTCCCCCAAAACAACCTaGCAGCCTTGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYISPKTT*QPCLAA
Trigger: CGCAGCCAGGCAAGGCTGTCAGGTTGTTTTGGGGGA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCTGGGGACAGCAAGTGTaGGACCCCCGCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPWGQQV*DPRCVL
Trigger: CAGGACACAGCGGGGGTCTCACACTTGCTGTCCCCA...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCACGAAGGCCAGTGGGTaGCACCTAAGCTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARTKASG*HLSCAE
Trigger: TTCTGCACAGCTTAGGTGTCACCCACTGGCCTTCGT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTTGTAGGGCCTTCAGCTaGTCCAGCACCTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYICRAFS*SSTSVC
Trigger: GCAGACGGAGGTGCTGGAGCAGCTGAAGGCCCTACA...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTCGAACTCAAGCTGCTaGCGGATCAGGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSNSSC*RIRSIC
Trigger: GCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCTGTGCGAAGTCAGATaGTGCAGCAGCGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARLCEVR*CSSVCR
Trigger: TCTGCAGACGCTGCTGCAGCATCTGACTTCGCACAG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACTGTGCGAAGTCAGATaGTGCAGCAGCGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALCEVR*CSSVCR
Trigger: TCTGCAGACGCTGCTGCAGCATCTGACTTCGCACAG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGATCAGGTCCATCTaGATCGAGAACTGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQRIRSI*IENCVS
Trigger: GGAGACGCAGTTCTCGATGCAGATGGACCTGATCCG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACCTTCTCTGCCTCCTTaGCGCCTCGGCGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITPSLPP*RLGGWA
Trigger: CGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAAAGCGCACGCTGCCTaGGTCCAGCTCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIKAHAA*VQLRWQ
Trigger: CTGCCATCTGAGCTGGACGCAGGCAGCGTGCGCTTT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCTCTGCGTCTTGTGCTaGTTCGCCAGAAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRLCVLC*FARRVR
Trigger: GCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGATCTCTGCGTCTTGTaGTGCTTCGCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGADLCVL*CFARRV
Trigger: CACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCTCGTGCACGAAGGGTaGGGAGATGGGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPLVHEG*GDGSLG
Trigger: GCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGAATTACCGGCGGCTaGAGTGATTACAGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRITGG*SDYRLR
Trigger: GCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTAATACTCTCCAGCCCTaGGTTCACCTGCCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPNTLQP*VHLPEG
Trigger: GCCTTCCGGCAGGTGAACGCAGGGCTGGAGAGTATT...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGGTGCAGCGTGACATaGATTCAGAGAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALGCSVT*IQRSSS
Trigger: ACTGCTGCTTCTCTGAATGCATGTCACGCTGCACCC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGATTTTCCCCGCTCTCTaGTCAGCCATCCATGACCCC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMIFPAL*SAIHDP
Trigger: GGGGTCATGGATGGCTGAGCAGAGAGCGGGGAAAAT...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGTGGGAGGGAGGCCTTaGAGTGGGCGTACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHVGGRP*SGRTLS
Trigger: ACTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCAC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGAAGGACCAGATGACGTaGAAAGCAACACATGTCTGC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRKDQMT*KATHVC
Trigger: GCAGACATGTGTTGCTTTGCACGTCATCTGGTCCTT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGAGGTCACCATCCCATaGCCAGCCAGGTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHEVTIP*PARWKD
Trigger: GTCCTTCCACCTGGCTGGGCATGGGATGGTGACCTC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTCCAGCTTGGACAGGTaGCTGGAGTTGTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSSLDR*LELSLS
Trigger: GCTAAGGGACAACTCCAGCCACCTGTCCAAGCTGGA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAGCGAGCGGATGTGCTaGGCCTCGAACTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYISERMC*ASNSSC
Trigger: GCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGGATGGAGCTGGCGATaGACGGGCTCTCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPGWSWR*TGSRSC
Trigger: GCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRSFHLI*HQILSS
Trigger: GCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCT...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCCTGGAGAAGGCACGTaGGGCATTGAGCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHPGEGT*GIERVP
Trigger: AGGCACACGCTCAATGCCCCACGTGCCTTCTCCAGG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGAGAGACTTACATATGTaGAAGGCAATGCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRDLHM*KAMPHH
Trigger: GTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCATGTTGGGGGCCAGTaGCGGTCACTGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRHVGGQ*RSLSIS
Trigger: GCTGATGGACAGTGACCGCCACTGGCCCCCAACATG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTTCAGCACCCACGTGTaGTCATGTTGGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPFSTHV*SCWGPV
Trigger: CACTGGCCCCCAACATGACCACACGTGGGTGCTGAA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTGGCTGAGCTCAGGGTaGCTACCTGTGTGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPWLSSG*LPVWPA
Trigger: TGCGGGCCACACAGGTAGCCACCCTGAGCTCAGCCA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGGGCCGGCCTCTGCATaGACGGGATCCGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFGPASA*TGSARA
Trigger: CGCCCGTGCGGATCCCGTTCATGCAGAGGCCGGCCC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGACAGATGGGGCCGGGTaGGGTAATGCTGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPTDGAG*GNAVGA
Trigger: AGCTCCGACAGCATTACCTCACCCGGCCCCATCTGT...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAGTTTTCCCTGTAGGTaGTTCAGGACCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWSFPCR*FRTSFM
Trigger: CATGAAGGAGGTCCTGAAGCACCTACAGGGAAAACT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGAGTTTTCCCTGTAGGTaGTTCAGGACCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESFPCR*FRTSFM
Trigger: CATGAAGGAGGTCCTGAAGCACCTACAGGGAAAACT...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACATGGGGCTCCGTCTGCTaGACTCGGTCCTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITWGSVC*TRSCAS
Trigger: GGAGGCGCAGGACCGAGTGCAGCAGACGGAGCCCCA...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAACAAGTTCCGAAGGATaGTGGACACCACCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGATSSEG*WTPPGG
Trigger: TCCACCAGGTGGTGTCCAGCATCCTTCGGAACTTGT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTTCTCTGTGCTGTGTaGAGACAGATTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAVLCAV*RQIPQG
Trigger: GCCCTGTGGAATCTGTCTGCACACAGCACAGAGAAC...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCCGCCTTGTTCTCTGTaGTGTGTGCAGACAGATTCC +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARPPCSL*CVQTDS
Trigger: GGAATCTGTCTGCACACAGCACAGAGAACAAGGCGG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTGCGAAGTCAGATGCTaGAGCAGCGTCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPCEVRC*SSVCRQ
Trigger: CTGTCTGCAGACGCTGCTGCAGCATCTGACTTCGCA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGATGGGCCAGCAGGTTaGGCAGGGCGGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFDGPAG*AGRRRC
Trigger: GCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTAGCGCCTGCGCGAGGTaGCGTGCGTCCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSACAR*RASSSA
Trigger: GGCCGAGCTGGACGCACGGCACCTCGCGCAGGCGCT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTGCGCCGCCAGTTTCTaGAGTGCCTTGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPCAASF*SALLAT
Trigger: TGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGCGAGGAAAGGGAGCTaGATCGGGACAGCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPARKGS*IGTARV
Trigger: CACTCTCGCTGTCCCGATGCAGCTCCCTTTCCTCGC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGACGGGCACGGGGAGTaGGCGGCGACCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRDGHGE*AATWHQ
Trigger: CTGGTGCCAGGTCGCCGCGCACTCCCCGTGCCCGTC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCGGCGGGGCAGCTGGTaGAGCCTTGGACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFRRGSW*SLGRGR
Trigger: CCTGCCCCGTCCAAGGCTGCACCAGCTGCCCCGCCG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACCGCGTGGCAGCTGCTaGCTGGTGCAGCCACGTGAC +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITPRGSC*LVQPRD
Trigger: GTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCATGGTCTCCGTAACGTaGAGGCTCCGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPMVSVT*RLRWGE
Trigger: CTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCAT...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCAGAAAGGCTGGCCTTaGCCATGCTGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPQKGWP*PCWGWD
Trigger: GTCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGATATGTGGAAGGCAATaGCGCACCACCTTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: TLPASSDPQLLRTGPGALICGRQ*RTTFLH
Trigger: ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATAT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTCTCCCCATCATCGCTaGCACCACGCTCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPSPHHR*HHAPPR
Trigger: TCTTGGGGGAGCGTGGTGGCAGCGATGATGGGGAGA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTAGCTCGGGAGGACCATaGCGGTGGGCACGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSSGGP*RWARRP
Trigger: GGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGCGCTGGCTTCTTTGTaGCTCTGGCCGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPALASL*LWPSSG
Trigger: GCCAGAAGACGGCCAGAGGCACAAAGAAGCCAGCGC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTCTCTGTCTCCAGCTTaGACAGGTGGCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQSLSPA*TGGWSC
Trigger: ACAACTCCAGCCACCTGTCCAAGCTGGAGACAGAGA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCGCGCGTCGCCAACATaGACAACAGCCAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIRASPT*TTARRP
Trigger: TGGTCTTCTGGCTGTTGTCCATGTTGGCGACGCGCG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCTGGGGACACGGCGGTaGCGGCCGCCTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFLGTRR*RPPGAW
Trigger: CCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGAGAAGTTCTCGTCTaGCTTCTCCACGGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQREVLV*LLHGKA
Trigger: CGCTTTACCGTGGAGAAGCCAGACGAGAACTTCTCG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACATCTTTGCCTGCCCGCTaGTCCCCCGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITSLPAR*SPGLVP
Trigger: AGGGACCAGCCCGGGGGACCAGCGGGCAGGCAAAGA...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGTCCCGGCCTCGTGGATaGACGGCCGGCGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRSRPRG*TAGGSE
Trigger: CTCGGAGCCGCCGGCCGTCCATCCACGAGGCCGGGA...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGCTCATCCAGCCGGGTaGCTCGGGGCTTGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRAHPAG*LGACGA
Trigger: GGCGCCGCAAGCCCCGAGCCACCCGGCTGGATGAGC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACATCCCCGGAGCACAGCTaGCACCCCGGGCGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITSPEHS*HPGRGL
Trigger: AAGACCACGCCCGGGGTGCCAGCTGTGCTCCGGGGA...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGCTCGGGACTTTGGCTaGAGCCGCGGGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITARDFG*SRGLCQ
Trigger: CTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTTGCGCGCCGGCGTTTTaGGCACCGGGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFCAPAF*APGRLR
Trigger: CCGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCA...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGCGACCTCCTCGGTCTaGACCACGGCGTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITATSSV*TTASLV
Trigger: GACCAGCGACGCCGTGGTCCAGACCGAGGAGGTCGC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWSFHLI*HQILSS
Trigger: GCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGGATGGTGTCATCCGTaGTGGGGCTGGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIGWCHP*WGWGFL
Trigger: AAGGAAACCCCAGCCCCACCACGGATGACACCATCC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTCACCAGCGACCTGGTaGCTGGCTTCGCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPSPATW*LASPFP
Trigger: GGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGAAACGGCAGGACAGATaGACCCAAGCCCACCGCCAT +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRKRQDR*TQAHRH
Trigger: ATGGCGGTGGGCTTGGGTCCATCTGTCCTGCCGTTT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATGGCGTGGGCCGCCTTaGGCCGCAGCAGCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAWRGPP*AAAAGA
Trigger: CGCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGCGCCGGGCCGATACTaGCTCCAGCGACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFAPGRY*LQRPLG
Trigger: CCCCAAGGGTCGCTGGAGTCAGTATCGGCCCGGCGC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCGCTTTATGCATCATaGACCAGAAGGGAATTGAAA +
Preference number: 4 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRALYAS*TRRELK
Trigger: TTTCAATTCCCTTCTGGTTCATGATGCATAAAGCGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACCCTCCATCGGTGGCTaGGCTCAGGGTGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITPSIGG*AQGGYL
Trigger: CAGGTAGCCACCCTGAGCTCAGCCACCGATGGAGGG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCCCCAGGACACATCCTaGCAGCCGGACAAACACACA +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPPQDTS*QPDKHT
Trigger: TGTGTGTTTGTCCGGCTGTCAGGATGTGTCCTGGGG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
57% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTTTGTCCCTTAGCTCCTaGCTCAGGTGGCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPLSLSS*LRWLFS
Trigger: TGAGAACAGCCACCTGAGGCAGGAGCTAAGGGACAA...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACGAGGCGCGGATCTGTaGCCGCTGCACCATCTCGTC +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITRGADL*PLHHLV
Trigger: GACGAGATGGTGCAGCGGGCACAGATCCGCGCCTCG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCATCTGCTCCAGCACGTaGAGGACGCGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPICSST*RTRISL
Trigger: CAAGGAGATGCGCGTCCTGCACGTGCTGGAGCAGAT...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTCCGCCTTGTTCTCTGTaGTGTGTGCAGACAGATTCC +
Preference number: 4 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPPPCSL*CVQTDS
Trigger: GGAATCTGTCTGCACACAGCACAGAGAACAAGGCGG...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGTGCGAAGTCAGATGCTaGAGCAGCGTCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRCEVRC*SSVCRQ
Trigger: CTGTCTGCAGACGCTGCTGCAGCATCTGACTTCGCA...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTACGATGGTCAGGCTGTaGGAAGTCAGATGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYITMVRL*EVRCCS
Trigger: GCTGCAGCATCTGACTTCGCACAGCCTGACCATCGT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCGGATCAGGTCCATCTaGATCGAGAACTGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHRIRSI*IENCVS
Trigger: GGAGACGCAGTTCTCGATGCAGATGGACCTGATCCG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAACCCCCAGGCCCTCGTaGACGAAGGGTGCGGAGATG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITTPRPS*TKGAEM
Trigger: CATCTCCGCACCCTTCGTGCACGAGGGCCTGGGGGT...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCGAATTACCGGCGGCTaGAGTGATTACAGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRRITGG*SDYRLR
Trigger: GCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 4 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVNENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCCAGCTGGGCCACGATaGCCTCCATGCAGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRPAGPR*PPCSRG
Trigger: GCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAGTTCCGAAGGATGCTaGACACCACCTGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYISSEGC*TPPGGA
Trigger: AGCTCCACCAGGTGGTGTCCAGCATCCTTCGGAACT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGTCCCACAGCAGCTCCTaGTCACGGGCGCTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRSHSSS*SRALRA
Trigger: GGCCCGCAGCGCCCGTGACCAGGAGCTGCTGTGGGA...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCCGATCATCTTGTGCTTaGAGTGCACCAGATTACGCA +
Preference number: 4 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPRSSCA*SAPDYA
Trigger: TGCGTAATCTGGTGCACTCCAAGCACAAGATGATCG...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGAGCAGTTCCAGCTCCTaGTCCGCGGCGCCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRSSSSS*SAAPRG
Trigger: CCCTCGCGGCGCCGCGGACCAGGAGCTGGAACTGCT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGAATTGGCGCCCTCCTaGATGGCGCGCCACTCCACG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITELAPS*MARHST
Trigger: CGTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACTGGCACCCCGGGCGTaGTCTTCTGTGTGCCACGTG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITLAPRA*SSVCHV
Trigger: CACGTGGCACACAGAAGACCACGCCCGGGGTGCCAG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACACCCTGGGGCGACCTATaGGGGACGTCTACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITPWGDL*GTSTAQ
Trigger: CTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGG...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCTGCTTCGTTCCTCCTaGAGAAGGCACGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPLLRSS*RRHVGH
Trigger: ATGCCCCACGTGCCTTCTCCAGGAGGAACGAAGCAG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCTGGTGTCATCCGTGGTaGGGCTGGGGTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPWCHPW*GWGFLL
Trigger: CAGAAGGAAACCCCAGCCCCACCACGGATGACACCA...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGGATGGTGTCATCCGTaGTGGGGCTGGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPGWCHP*WGWGFL
Trigger: AAGGAAACCCCAGCCCCACCACGGATGACACCATCC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGTTCTGCCAGAAAGGCTaGCCTTGCCCATGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPFCQKG*PCPCWG
Trigger: TCCCCAGCATGGGCAAGGCCAGCCTTTCTGGCAGAA...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACATGCGCACCTTGCTGCTaGGCAAGGCGTCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITCAPCC*ARRHGQ
Trigger: CTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCA...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCTTCAGCACCCACGTGTaGTCATGTTGGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPFSTHV*SCWGPV
Trigger: CACTGGCCCCCAACATGACCACACGTGGGTGCTGAA...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGCGACGCGTAGCGCTTaGCAGTCTCCGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAATRSA*QSPAGR
Trigger: CCGCCCGGCCGGAGACTGTCAAGCGCTACGCGTCGC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGGCAGTGGGCGTACCTTaGGTTGATTGTCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPAVGVP*VDCPET
Trigger: GGTCTCTGGACAATCAACTCAAGGTACGCCCACTGC...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCTTCTTGGTCTGTCCTaGGTCTCAGGGACCACCATT +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYILLGLS*VSGTTI
Trigger: AATGGTGGTCCCTGAGACTCAGGACAGACCAAGAAG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGTTGTCCCTTAGCTCCTaGCTCAGGTGGCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRLSLSS*LRWLFS
Trigger: TGAGAACAGCCACCTGAGGCAGGAGCTAAGGGACAA...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGTTTTCCCTGTAGGTaGTTCAGGACCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASFPCR*FRTSFM
Trigger: CATGAAGGAGGTCCTGAAGCACCTACAGGGAAAACT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTTGGGGCTCCGTCTGCTaGACTCGGTCCTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFWGSVC*TRSCAS
Trigger: GGAGGCGCAGGACCGAGTGCAGCAGACGGAGCCCCA...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGTTCTCTGTGCTGTGTaGAGACAGATTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RRPETYICGRQCRTTFLHVLCAV*RQIPQG
Trigger: GCCCTGTGGAATCTGTCTGCACACAGCACAGAGAAC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGATCTTGTGCTTGGAGTaGACCAGATTACGCAGCATG +
Preference number: 4 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMILCLE*TRLRSM
Trigger: CATGCTGCGTAATCTGGTGCACTCCAAGCACAAGAT...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACGGCCGGTGGGTCTTTaGCTGCCCGCTGGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTARPVGL*LPAGPP
Trigger: CGGGGGACCAGCGGGCAGGCAAAGACCCACCGGCCG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCCCGCCTTGTGCCGGTaGCCCATGGCCTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFPALCR*PMACLA
Trigger: TGCCAGACAGGCCATGGGGCACCGGCACAAGGCGGG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCCGCGTGGCAGCTGCTaGCTGGTGCAGCCACGTGAC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRPRGSC*LVQPRD
Trigger: GTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATGGAGCCGCGGGCTGTaGCAGGCAAGGGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAWSRGL*QARGRH
Trigger: GTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 4 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGENENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTAGCCGGCCCGGCGTCTaGACCAGGGTCCCATCGTAC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSRPGV*TRVPSY
Trigger: GTACGATGGGACCCTGGTGCAGACGCCGGGCCGGCT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGGGCCTCGGGCTCACTaGCGGGACTCCCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRGPRAH*RDSPQS
Trigger: AGACTGAGGGGAGTCCCGGCAGTGAGCCCGAGGCCC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCCAGCAGCCGGATGGTaGCCCGGCTCAGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRPAAGW*PGSAPQ
Trigger: TTGGGGAGCTGAGCCGGGCCACCATCCGGCTGCTGG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAAGCCCGAGCGGCGCATaGCCACGCAGCTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTASPSGA*PRSSRA
Trigger: CGCCCGAGAGCTGCGTGGCCATGCGCCGCTCGGGCT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGAGATCTGCGGCTCGATaGGGATCGGGGCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRRSAAR*GSGRCR
Trigger: CCGGCAGCGCCCCGATCCCCATCGAGCCGCAGATCT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGATCATCTTGTGCTTaGAGTGCACCAGATTACGCA +
Preference number: 4 (lower is better)
Translates to: LISELPAAAVITGFAPARRSSCA*SAPDYA
Trigger: TGCGTAATCTGGTGCACTCCAAGCACAAGATGATCG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGTGCTTGGCGGGCCGATaGGCCAGCAGGTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRCLAGR*ASRLRR
Trigger: CCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCA...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGAGACTTACATATGTaGAAGGCAATGCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: ATWWLASPFPYPLAIRGARDLHM*KAMPHH
Trigger: GTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGAGGGAGGCCTTGCAGTaGGCGTACCTTGAGTTGATT +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRREALQ*AYLELI
Trigger: AATCAACTCAAGGTACGCCCACTGCAAGGCCTCCCT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGGTCCGGCCGGGCTTTaGGCCGTCCTTGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAGPAGL*AVLVCG
Trigger: CCCGCAGACAAGGACGGCTCAAAGCCCGGCCGGACC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACATGGAGAAGGCGAAAGTaGGCTCAGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITWRRRK*AQDSGW
Trigger: CCACCCCGAGTCCTGAGCTCACTTTCGCCTTCTCCA...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGACAAGTTCCGAAGGATaGTGGACACCACCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPTSSEG*WTPPGG
Trigger: TCCACCAGGTGGTGTCCAGCATCCTTCGGAACTTGT...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGAACTGCGTCTCCACGTaGGGCAGCTCGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRNCVST*GSSSRR
Trigger: GCGCCTGGACGAGCTGCCGCACGTGGAGACGCAGTT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGTTTCTGCAGTGCCTTaGTGGCCACAGACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITVSAVP*WPQTAG
Trigger: CCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAAC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGCCTCCTTCCGGCCCTaGGGACGCTCCCGCGTAAAA +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFASFRP*GRSRVK
Trigger: TTTTACGCGGGAGCGTCCGCAGGGCCGGAAGGAGGC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGGGCTGGGCACGGGGTaGCGGGCTGGGGACGTAGAT +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAGLGTG*RAGDVD
Trigger: ATCTACGTCCCCAGCCCGGCACCCCGTGCCCAGCCC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCTGCTGGAGCTTTTCTaGAGAAAAGAGGTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPLLELF*RKEVVG
Trigger: GCCGACGACCTCTTTTCTGCAGAAAAGCTCCAGCAG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCGGGCTGTCCCGTCCTaGTCAGGGGACGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFRAVPS*SGDAVC
Trigger: ACACACTGCGTCCCCTGAGCAGGACGGGACAGCCCG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGGAACCTTGCTCAGGTaGTCTGCCGGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRGTLLR*SAGSQA
Trigger: GGCCTGGCTGCCGGCAGACCACCTGAGCAAGGTTCC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCCTGTCTGGCAGAGGTaGGGCGGCCGGTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFPVWQR*GGRWVF
Trigger: AAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCCAGCTCCGAGGTCTTaGCAGGCCGGTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRPAPRS*QAGVGS
Trigger: GGAGCCTACACCGGCCTGCCAAGACCTCGGAGCTGG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGTGCTGGAGTTGGTCTTaGGGGCGGCGACCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRCWSWS*GRRPPR
Trigger: CCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCA...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATACAGCGCAGGCCCATaGGGCAGCCAGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAYSAGP*GSQTAP
Trigger: CGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCAGCCAGCATCTCCTCTaGGATGGGGTCCAAATGTCA +
Preference number: 4 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPSQHLL*DGVQMS
Trigger: TGACATTTGGACCCCATCCCAGAGGAGATGCTGGCT...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCAGTCTCCTTTCCATTaGCCTCGCCCGCCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRQSPFH*PRPPRL
Trigger: CAGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACTGGGCGGTGAGGTGTaGCTGTGGCCCCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTALGGEV*LWPPRQ
Trigger: CTGCCGTGGGGGCCACAGCCACACCTCACCGCCCAG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACATGGAGACAGCTGGACTaGGCGGTGAGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITWRQLD*AVRCGC
Trigger: ACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCA...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGTACCGGCGGCTGCAGTaGTTACAGGCTTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRYRRLQ*LQASPL
Trigger: CAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTA...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGTGGCACACCTCGGTaGCTTATGGACGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITGGTPR*LMDVLS
Trigger: AGACAGGACGTCCATAAGTCACCGAGGTGTGCCACC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGAGCTCTGCCACGGCCTaGAGCCCACCTAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRSSATA*SPPSSF
Trigger: GAACGAGCTAGGTGGGCTGCAGGCCGTGGCAGAGCT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTTCGTCGGACGAGGTGTaGAGGGCGGAGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSSDEV*RAEMSS
Trigger: GGAGGACATCTCCGCCCTGCACACCTCGTCCGACGA...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCGCACGGGCGATCTCTaGGTCTTGTGCTGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFRTGDL*VLCCFA
Trigger: GGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGAGGACAGCTCCTTCTaGCAGAAAGGCTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: NNPCKALISELPAAAVITEDSSF*QKGWPC
Trigger: GCAAGGCCAGCCTTTCTGGCAGAAGGAGCTGTCCTC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCCAGAGACCGCGGACTaGCTGTCCCCTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRPETAD*LSPSGD
Trigger: GTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCTGG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCATGGCGAGCAGGACTaGGCGCGGCCCTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTHGEQD*ARPSRG
Trigger: GCCACGGGAGGGCCGCGCCCAGTCCTGCTCGCCATG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATTGGAGAGGCTGGCGTaGGCCGCCTTGAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTALERLA*AALSRS
Trigger: GCTGCGGCTCAAGGCGGCCCACGCCAGCCTCTCCAA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCCAGCTCAGCCTCGCTaGGGCCGGCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTPAQPR*GRPPPA
Trigger: GGCTGGAGGAGGCCGGCCCCAGCGAGGCTGAGCTGG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATGCGTCCAGCTCAGATaGCAGCCGGCAGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTACVQLR*QPAALP
Trigger: CGGGAGCGCTGCCGGCTGCCATCTGAGCTGGACGCA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGAGTGCGCGGCGACCTaGCACCAGCGCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTECAAT*HQRGGH
Trigger: GTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGTGCTGCGCAGGATGTaGGGCACGTCCTCATCTCGG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFVLRRM*GTSSSR
Trigger: CCGAGATGAGGACGTGCCCCACATCCTGCGCAGCAC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGAGCTTTCACCTCATCTaGCACCAAATACTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRSFHLI*HQILSS
Trigger: GCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGAGAGACTTACATATGTaGAAGGCAATGCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: SPATWWLASPFPYPLAIRRDLHM*KAMPHH
Trigger: GTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGGTGAGGTGTGGCTGTaGCCCCCACGGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAGEVWL*PPRQGM
Trigger: CATCCCCTGCCGTGGGGGCCACAGCCACACCTCACC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCAAGGCCAGCGCGCTaGGGCTGGAGGCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTARPAR*GWRRTR
Trigger: TCTCGTGCGCCTCCAGCCTCAGCGCGCTGGCCTTGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGAGCTGGACTGGGCGGTaGGGTGTGGCTGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTSWTGR*GVAVAP
Trigger: GGGGGCCACAGCCACACCTCACCGCCCAGTCCAGCT...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGACATGGCCAGCAGCGTaGGCGCTGTATCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRTWPAA*ALYPPG
Trigger: ACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGTTGGCGCGCATGCGTaGGTCCTTGGCGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTVGAHA*VLGARC
Trigger: GCACCGGGCGCCAAGGACGCACGCATGCGCGCCAAC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACCTCCGCGGAGTCAGTaGAGGAGTCGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAPPRSQ*RSRPPG
Trigger: CCCAGGAGGACGACTCCTGCACTGACTCCGCGGAGG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGCCCGGAGCATGGGGTaGAGCGTGACATGCATTCAG +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRARSMG*SVTCIQ
Trigger: CTGAATGCATGTCACGCTGCACCCCATGCTCCGGGC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCAGCATATGTTCGCGTaGGCAGTACCCGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFQHMFA*AVPVAG
Trigger: GCCAGCGACGGGTACTGCCCACGCGAACATATGCTG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGTCGCGTCCGCCTCCTaGGCCCGGGTCCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTVASAS*ARVLGD
Trigger: GTCACCAAGGACCCGGGCCCAGGAGGCGGACGCGAC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGGGACGTGCTGGAGTTaGTCTTGGGGGCGGCGACCT +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAGTCWS*SWGRRP
Trigger: AGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCATGTTGGGGGCCAGTaGCGGTCACTGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRHVGGQ*RSLSIS
Trigger: GCTGATGGACAGTGACCGCCACTGGCCCCCAACATG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTAGGTGGAGTGAGAGGTaGCCCCAAGGGGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFRWSER*PQGETE
Trigger: CTCTGTCTCCCCTTGGGGCCACCTCTCACTCCACCT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGCCTCGAACTCAAGCTaGTGCCGGATCAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFASNSS*CRIRSI
Trigger: GATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCGGCCGCGGCCTCGGTaGCGTGGAGGATTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTRPRPR*RGGFAA
Trigger: TGCTGCAAATCCTCCACGGCACCGAGGCCGCGGCCG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAAGCTCTGCCACGGCCTaGAGCCCACCTAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTASSATA*SPPSSF
Trigger: GAACGAGCTAGGTGGGCTGCAGGCCGTGGCAGAGCT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGATGGCGATCATCTTGTaGTTGGAGTGCACCAGATTA +
Preference number: 4 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPMAIIL*LECTRL
Trigger: TAATCTGGTGCACTCCAAGCACAAGATGATCGCCAT...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCCTCCAGCGCCCGCTaGTTGCGCACGTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTASSAR*LRTYRL
Trigger: CAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAACTGGTGTCCTTCTCTaGCTCCTTGCCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTATGVLL*LLAASA
Trigger: CGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTCCTCGTCCGAGTCGTTaGCGTAGAAGCAGTACACGG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFPRPSR*RRSSTR
Trigger: CCGTGTACTGCTTCTACGGCAACGACTCGGACGAGG...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGGAGGACAGCTCCTTCTaGCAGAAAGGCTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETREDSSF*QKGWPC
Trigger: GCAAGGCCAGCCTTTCTGGCAGAAGGAGCTGTCCTC...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTATGCTGGACACCACCTaGTGGAGCTCCTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFMLDTT*WSSSLS
Trigger: CGACAGTGAGGAGCTCCACCAGGTGGTGTCCAGCAT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTTGGAGAGGCTGGCGTaGGCCGCCTTGAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTLERLA*AALSRS
Trigger: GCTGCGGCTCAAGGCGGCCCACGCCAGCCTCTCCAA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCCTGAACACCGTCTaGGCGGGGCTTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTSLNTV*AGLPAG
Trigger: CCCGGCAGGAAGCCCCGCCCAGACGGTGTTCAGGGA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATGGCCTTGCCCATGCTaGGGATGGGACGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAWPCPC*GWDGRD
Trigger: ATCCCTCCCGTCCCATCCCCAGCATGGGCAAGGCCA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCACCAGGGGCACGGCTaGGACAGGAGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTHQGHG*DRSRGG
Trigger: CCCACCCCTACTCCTGTCCCAGCCGTGCCCCTGGTG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCAGGGCGGCGGCGCTaGCCATGGCGATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTAGRRR*PWRSSC
Trigger: ACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCGGATCAGGTCCATCTaGATCGAGAACTGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRRIRSI*IENCVS
Trigger: GGAGACGCAGTTCTCGATGCAGATGGACCTGATCCG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGCTTCTCGGGAACCTTaGTCAGGTGGTCTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAASREP*SGGLPA
Trigger: TGCCGGCAGACCACCTGAGCAAGGTTCCCGAGAAGC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAATGAAAACAATCCCTaGAAAGCCCTCATTAGCGAA +
Preference number: 4 (lower is better)
Translates to: ASRTADGVVLTPDRWLYINENNP*KALISE
Trigger: TTCGCTAATGAGGGCTTTGCAGGGATTGTTTTCATT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGAGCTCTCGGGCGAGCTaGACATGGCCAGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTSSRAS*TWPAAC
Trigger: GCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCT...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGACGCGTTGCTCACGATaGTCAGGCTGTGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRTRCSR*SGCAKS
Trigger: TGACTTCGCACAGCCTGACCATCGTGAGCAACGCGT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACGCGTTGCTCACGATaGTCAGGCTGTGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFTRCSR*SGCAKS
Trigger: TGACTTCGCACAGCCTGACCATCGTGAGCAACGCGT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCGTCTTGCTCCGGCTaGGAGGCATGGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTASCSG*EAWSVR
Trigger: CCGGACAGACCATGCCTCCCAGCCGGAGCAAGACGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGCACCTTCTTGCTGTTaGTGTCGGCCCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAAPSCC*CRPSRT
Trigger: TGTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGAGAAGACGATGTTGTaGAGCGCCGCGTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTEKTML*SAALAR
Trigger: GCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCGTCGGACGAGGTGTaGAGGGCGGAGATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTSSDEV*RAEMSS
Trigger: GGAGGACATCTCCGCCCTGCACACCTCGTCCGACGA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCGTGGTCTTCTGTGTaGCACGTGGCTTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTAWSSV*HVASRG
Trigger: GCCCCGAGAAGCCACGTGGCACACAGAAGACCACGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATCCCCGCCCCAGCTGTaGTGTTTCTGGAGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTASPPQL*CFWSSR
Trigger: CCTAGAACTCCAGAAACAGCACAGCTGGGGCGGGGA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGCCCCAAAGCTGTCCTTaGAGGGCCCGGAGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTPQSCP*RARSRV
Trigger: TACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGG...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGGCACCCTCAAGCAGTaGCACGTGCTGATAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAGTLKQ*HVLIGR
Trigger: CCTACCTATCAGCACGTGCCACTGCTTGAGGGTGCC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGTGCTGCGCAGGATGTaGGGCACGTCCTCATCTCGG +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTVLRRM*GTSSSR
Trigger: CCGAGATGAGGACGTGCCCCACATCCTGCGCAGCAC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGAAGGCAGCGCCTGCTaGAGCTTTTCTGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFEGSAC*SFSAEK
Trigger: CTTTTCTGCAGAAAAGCTCCAGCAGGCGCTGCCTTC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGCATGGGGTGCAGCGTaGCATGCATTCAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAAWGAA*HAFREA
Trigger: TGCTTCTCTGAATGCATGTCACGCTGCACCCCATGC...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTGGAGAAGGCGAAAGTaGGCTCAGGACTCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTWRRRK*AQDSGW
Trigger: CCACCCCGAGTCCTGAGCTCACTTTCGCCTTCTCCA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR TCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGACAGATGGGGCCGGGTaGGGTAATGCTGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTTDGAG*GNAVGA
Trigger: AGCTCCGACAGCATTACCTCACCCGGCCCCATCTGT...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAACGATGGTCAGGCTGTaGGAAGTCAGATGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTATMVRL*EVRCCS
Trigger: GCTGCAGCATCTGACTTCGCACAGCCTGACCATCGT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCTTCTCGGGAACCTTaGTCAGGTGGTCTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTASREP*SGGLPA
Trigger: TGCCGGCAGACCACCTGAGCAAGGTTCCCGAGAAGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGATATGTGGAAGGCAATaGCGCACCACCTTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRICGRQ*RTTFLH
Trigger: ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATAT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACACCTAGCTCGTTCATaGCACGGCGGTACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAHLARS*HGGTPH
Trigger: ATGAGGAGTACCGCCGTGCCATGAACGAGCTAGGTG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACACCTCGGTGACTTATaGACGTCCTGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAHLGDL*TSCLEL
Trigger: GAGCTCCAGACAGGACGTCCATAAGTCACCGAGGTG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCCCCTCTCTGGCTTTaGGTTGCCCCTCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTAPLWL*VAPLRN
Trigger: GTTCCTCAGAGGGGCAACCCAAAGCCAGAGAGGGGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGGCACCCTCAAGCAGTaGCACGTGCTGATAGGTAGG +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTGTLKQ*HVLIGR
Trigger: CCTACCTATCAGCACGTGCCACTGCTTGAGGGTGCC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGGATGGTGTCATCCGTaGTGGGGCTGGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTGWCHP*WGWGFL
Trigger: AAGGAAACCCCAGCCCCACCACGGATGACACCATCC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTGCGAAGTCAGATGCTaGAGCAGCGTCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTCEVRC*SSVCRQ
Trigger: CTGTCTGCAGACGCTGCTGCAGCATCTGACTTCGCA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGATGGCGATCATCTTGTaGTTGGAGTGCACCAGATTA +
Preference number: 4 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRMAIIL*LECTRL
Trigger: TAATCTGGTGCACTCCAAGCACAAGATGATCGCCAT...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCTCTGGCTTTGGGTTaGCCCTCTGAGGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTSLALG*PSEEPA
Trigger: TGCAGGTTCCTCAGAGGGGCAACCCAAAGCCAGAGA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTACAGAAACGTGGGGTaGCGGCTAGGGGAATCAGAC +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTYRNVG*RLGESD
Trigger: GTCTGATTCCCCTAGCCGCCACCCCACGTTTCTGTA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAAGCTGTCCCTGCCGATaGACAATGAAAACACCACGA +
Preference number: 4 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTASCPCR*TMKTPR
Trigger: TCGTGGTGTTTTCATTGTCCATCGGCAGGGACAGCT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR TCA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTGCGCTTTATGCATCATaGACCAGAAGGGAATTGAAA +
Preference number: 4 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFALYAS*TRRELK
Trigger: TTTCAATTCCCTTCTGGTTCATGATGCATAAAGCGC...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCTCTGTCTCCAGCTTaGACAGGTGGCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTSLSPA*TGGWSC
Trigger: ACAACTCCAGCCACCTGTCCAAGCTGGAGACAGAGA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR GCA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGATGGCGATCATCTTGTaGTTGGAGTGCACCAGATTA +
Preference number: 4 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTMAIIL*LECTRL
Trigger: TAATCTGGTGCACTCCAAGCACAAGATGATCGCCAT...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp ACGCGGGCGTCGGCGGAGGTGGCCTCGCGGGCCGGGGGCTCGGCCTaGCAGCCGGGCAGGTCAAGGTCAAGCCGGCTGGGCCGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: TRASAEVASRAGGSA*QPGRSRSSRLGRGC
Trigger: GCAGCCTCGGCCCAGCCGGCTTGACCTTGACCTGCCCGGCTGCCAGGCCGAGCCCCCGGCCCGCGAGGCCACCTCCGCCGACGCCCGCGT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp GGCTGGGCGAGCTGTCGCGTCCGCCTCCTGGGCCCGGGTCCTTGGTaGCCGCGGGCTCCCGGCCTCGTGGATGGACGGCCGGCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: GWASCRVRLLGPGPW*PRAPGLVDGRPAAP
Trigger: CGGAGCCGCCGGCCGTCCATCCACGAGGCCGGGAGCCCGCGGTCACCAAGGACCCGGGCCCAGGAGGCGGACGCGACAGCTCGCCCAGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CTGGGCACGCAGCTGCCTGGGGACACGGCGGTGGCGGCCGCCTGGTaGTTGGCGGGCCGATGGGCCAGCAGGTTGCGCAGGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: LGTQLPGDTAVAAAW*LAGRWASRLRRAAA
Trigger: CGCCGCCGCCCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGTGCCCAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCACGCAGCTGCCTGGGGACACGGCGGTGGCGGCCGCCTGGTGCTTaGCGGGCCGATGGGCCAGCAGGTTGCGCAGGGCGGCGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ARSCLGTRRWRPPGA*RADGPAGCAGRRRC
Trigger: GCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCAGGCACGGCGGCTCCCAGGCACTCCCGCAGCAGTTCCAGCTCCTaGTCCGCGGCGCCGCGAGGGCGAGAACCCGTGGGCGCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: AGTAAPRHSRSSSSS*SAAPRGREPVGAGP
Trigger: GGGGCCGGCGCCCACGGGTTCTCGCCCTCGCGGCGCCGCGGACCAGGAGCTGGAACTGCTGCGGGAGTGCCTGGGAGCCGCCGTGCCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CTCCTCCGCGGCCCGCGGGCTGGGCGAGCTGTCGCGTCCGCCTCCTaGGCCCGGGTCCTTGGTGACCGCGGGCTCCCGGCCTCGTGGATG +
Preference number: 5 (lower is better)
Translates to: LLRGPRAGRAVASAS*ARVLGDRGLPASWM
Trigger: CATCCACGAGGCCGGGAGCCCGCGGTCACCAAGGACCCGGGCCCAGGAGGCGGACGCGACAGCTCGCCCAGCCCGCGGGCCGCGGAGGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCCTCGGCTGCCGGCGGGCCCTGCTTCTCCAGGTGCTCCAGCGCCTaGGCGAGGTGCCGTGCGTCCAGCTCGGCCTCCAGCGCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: ASAAGGPCFSRCSSA*ARCRASSSASSARC
Trigger: GCAGCGGGCGCTGGAGGCCGAGCTGGACGCACGGCACCTCGCGCAGGCGCTGGAGCACCTGGAGAAGCAGGGCCCGCCGGCAGCCGAGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCACGGGGAGTGCGCGGCGACCTGGCACCAGCGCGGAGGCCACCTTaGGCAGCCGGGCAGGCACGGCGGCTCCCAGGCACTCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: ARGVRGDLAPARRPP*AAGQARRLPGTPAA
Trigger: TGCTGCGGGAGTGCCTGGGAGCCGCCGTGCCTGCCCGGCTGCGCAAGGTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTCCCCGTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCTGGGGACACGGCGGTGGCGGCCGCCTGGTGCTTGGCGGGCCGATaGGCCAGCAGGTTGCGCAGGGCGGCGGCGCTGCCCATGGCGATC +
Preference number: 5 (lower is better)
Translates to: PGDTAVAAAWCLAGR*ASRLRRAAALPMAI
Trigger: GATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCGTGCGCGCCGGCGTTTaGGGCACCGGGGAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPVRAGV*GTGEAP
Trigger: CGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCAC...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCTCCCCAAAGCTGTCCTTGGAGGGCCCGGAGCCGTGTACTGGGCTaGCCTCGGGGGTCCGGGCGGCAGGCTCCGGGCCCAGGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: APQSCPWRARSRVLG*PRGSGRQAPGPGWA
Trigger: CGCCCACCCTGGGCCCGGAGCCTGCCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS GCA 90 bp CCTCCAGCGCCCGCTGCTTGCGCACGTACAGGCTGGGCACGCAGCTaGCTGGGGACACGGCGGTGGCGGCCGCCTGGTGCTTGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PPAPAACARTGWARS*LGTRRWRPPGAWRA
Trigger: GGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCCTCCTTGCCGCCTCGGCGGGTGGGCGGGGTGCGAGCCAGCGCCTaGCCCTGCAGGAAGGGGCTGCCCAGGAAGAGGGACAGCGCGGCA +
Preference number: 5 (lower is better)
Translates to: ASLPPRRVGGVRASA*PCRKGLPRKRDSAA
Trigger: TGCCGCGCTGTCCCTCTTCCTGGGCAGCCCCTTCCTGCAGGGGCAGGCGCTGGCTCGCACCCCGCCCACCCGCCGAGGCGGCAAGGAGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCGGGGGCTCGGCCTGGCAGCCGGGCAGGTCAAGGTCAAGCCGGCTaGGCCGAGGCTGCCCACACCTGGGGTCCTCGCGGCGCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PGARPGSRAGQGQAG*AEAAHTWGPRGAKP
Trigger: TGGCTTCGCGCCGCGAGGACCCCAGGTGTGGGCAGCCTCGGCCCAGCCGGCTTGACCTTGACCTGCCCGGCTGCCAGGCCGAGCCCCCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCTCCGCGCTGCGGCCGGCGCCTCCCGCCTTGTGCCGGTGCCCCATaGCCTGTCTGGCAGAGGTGGGGCGGCCGGTGGGTCTTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: APRCGRRLPPCAGAP*PVWQRWGGRWVFAC
Trigger: GCAGGCAAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGCCGGCCGCAGCGCGGAGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCGCGAGGTGCCGTGCGTCCAGCTCGGCCTCCAGCGCCCGCTGCTTaGGCACGTACAGGCTGGGCACGCAGCTGCCTGGGGACACGGCGG +
Preference number: 5 (lower is better)
Translates to: ARGAVRPARPPAPAA*ARTGWARSCLGTRR
Trigger: CCGCCGTGTCCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGCCGAGCTGGACGCACGGCACCTCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCCTGGCAGCCGGGCAGGTCAAGGTCAAGCCGGCTGGGCCGAGGCTaGCCACACCTGGGGTCCTCGCGGCGCGAAGCCAGTGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AWQPGRSRSSRLGRG*PHLGSSRREASAAS
Trigger: GCTGGCCGCACTGGCTTCGCGCCGCGAGGACCCCAGGTGTGGGCAGCCTCGGCCCAGCCGGCTTGACCTTGACCTGCCCGGCTGCCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CGAGACTGCTCCGCGCTGCGGCCGGCGCCTCCCGCCTTGTGCCGGTaGCCCATGGCCTGTCTGGCAGAGGTGGGGCGGCCGGTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: RDCSALRPAPPALCR*PMACLAEVGRPVGL
Trigger: AAGACCCACCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGCCGGCCGCAGCGCGGAGCAGTCTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCGCCACTCCACGCTATCCAGGTCGGAGGCCCGGTCCGAGCCCGCTaGCTCCTCGCCGCGTTCCCGGGACCCCTCTGCGGGCCGCTCATC +
Preference number: 5 (lower is better)
Translates to: APLHAIQVGGPVRAR*LLAAFPGPLCGPLI
Trigger: GATGAGCGGCCCGCAGAGGGGTCCCGGGAACGCGGCGAGGAGGCAGCGGGCTCGGACCGGGCCTCCGACCTGGATAGCGTGGAGTGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CGGGAAGCGTGCTGCGCAGGATGTGGGGCACGTCCTCATCTCGGATaGGCCGCCAGGTCGTGCCCGGCGCGGCCACCCTGGGGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: REACCAGCGARPHLG*AARSCPARPPWGAA
Trigger: GGCCGCTCCCCAGGGTGGCCGCGCCGGGCACGACCTGGCGGCGCATCCGAGATGAGGACGTGCCCCACATCCTGCGCAGCACGCTTCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CAGCGCCCGCTGCTTGCGCACGTACAGGCTGGGCACGCAGCTGCCTaGGGACACGGCGGTGGCGGCCGCCTGGTGCTTGGCGGGCCGATG +
Preference number: 5 (lower is better)
Translates to: QRPLLAHVQAGHAAA*GHGGGGRLVLGGPM
Trigger: CATCGGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CGTCCAGCTCGGCCTCCAGCGCCCGCTGCTTGCGCACGTACAGGCTaGGCACGCAGCTGCCTGGGGACACGGCGGTGGCGGCCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RPARPPAPAACARTG*ARSCLGTRRWRPPG
Trigger: ACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGCCGAGCTGGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCAGCGTCCGCTTACGTGCAGCTGGGCTGGCGGGGCGCCTGGGTCTaGGGCCTCCTCCCTCTGCGCGGCTCCGCGGGCCCCACCGGAAAT +
Preference number: 5 (lower is better)
Translates to: AASAYVQLGWRGAWV*GLLPLRGSAGPTGN
Trigger: ATTTCCGGTGGGGCCCGCGGAGCCGCGCAGAGGGAGGAGGCCCCAGACCCAGGCGCCCCGCCAGCCCAGCTGCACGTAAGCGGACGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233607.6
ENST00000590469.6
CDS CCA 90 bp GGCGGGCACCAACATGTAGACGGGCACGGGGAGTGCGCGGCGACCTaGCACCAGCGCGGAGGCCACCTTGCGCAGCCGGGCAGGCACGGC +
Preference number: 5 (lower is better)
Translates to: GGHQHVDGHGECAAT*HQRGGHLAQPGRHG
Trigger: GCCGTGCCTGCCCGGCTGCGCAAGGTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTCCCCGTGCCCGTCTACATGTTGGTGCCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CGCCTCCCGCCTTGTGCCGGTGCCCCATGGCCTGTCTGGCAGAGGTaGGGCGGCCGGTGGGTCTTTGCCTGCCCGCTGGTCCCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RLPPCAGAPWPVWQR*GGRWVFACPLVPRA
Trigger: AGCCCGGGGGACCAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp TGCGGCCGGCGCCTCCCGCCTTGTGCCGGTGCCCCATGGCCTGTCTaGCAGAGGTGGGGCGGCCGGTGGGTCTTTGCCTGCCCGCTGGTC +
Preference number: 5 (lower is better)
Translates to: CGRRLPPCAGAPWPV*QRWGGRWVFACPLV
Trigger: GACCAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGCCGGCCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCCGGTGTAGGCTCCGCGACCGCTGCTGCCCGGGGCTCGGGACTTTaGCTGGAGCCGCGGGCTGTGCCAGGCAAGGGGGCGCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: AGVGSATAAARGSGL*LEPRAVPGKGAPPS
Trigger: GGAAGGTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCTACACCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCTCCTTCTCTGCCTCCTaGCCGCCTCGGCGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPSFSAS*PPRRVG
Trigger: GCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGGA...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCGGCCCCTGCGAGTCCCACCCCACGCAGGAGGCCCAGCTCCCAGCCTCCCCAGGCAGGGGGATCCGTaGGCCTCTGCCCCTCCCACC +
Preference number: 5 (lower is better)
Translates to: TRPLRVPPHAGGPAPSLPRQGDP*ASAPPT
Trigger: GGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCCT...GGGGAGGCTGGGAGCTGGGCCTCCTGCGTGGGGTGGGACTCGCAGGGGCCGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCCTGCGCGAGGTGCCGTGCGTCCAGCTCGGCCTCCAGCGCCCGCTaGTTGCGCACGTACAGGCTGGGCACGCAGCTGCCTGGGGACACG +
Preference number: 5 (lower is better)
Translates to: ACARCRASSSASSAR*LRTYRLGTQLPGDT
Trigger: CGTGTCCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGCCGAGCTGGACGCACGGCACCTCGCGCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CTTGGCCTTGGCCGCCACGGCTGCCTCCCCACTGGTGTCCTTCTCTaGCTCCTTGCCGCCTCGGCGGGTGGGCGGGGTGCGAGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: LGLGRHGCLPTGVLL*LLAASAGGRGASQR
Trigger: GCGCTGGCTCGCACCCCGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAGGCCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GCCAGCTCCGAGGTCTTGGCAGGCCGGTGTAGGCTCCGCGACCGCTaGTGCCCGGGGCTCGGGACTTTGGCTGGAGCCGCGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: ASSEVLAGRCRLRDR*CPGLGTLAGAAGCA
Trigger: GGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCTACACCGGCCTGCCAAGACCTCGGAGCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CCTCGGGCGTGGAGCCCCGCAGTGGCAGGGCCGTGGCGGGAAGCGTaGTGCGCAGGATGTGGGGCACGTCCTCATCTCGGATGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: PRAWSPAVAGPWREA*CAGCGARPHLGCAA
Trigger: GGCGGCGCATCCGAGATGAGGACGTGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGGCCCTGCCACTGCGGGGCTCCACGCCCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCTCAGCTCCCCAAAGCTGTCCTTGGAGGGCCCGGAGCCGTGTACTaGGCTGCCCTCGGGGGTCCGGGCGGCAGGCTCCGGGCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: AQLPKAVLGGPGAVY*AALGGPGGRLRAQG
Trigger: ACCCTGGGCCCGGAGCCTGCCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGAGCTGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 90 bp GGCCCTGGTCCGGCTGCGAGAAGACGATGTTGTGCAGCGCCGCGTTaGCGCGCATGCGTGCGTCCTTGGCGCCCGGTGCCCCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GPGPAARRRCCAAPR*RACVRPWRPVPLGP
Trigger: GGGCCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp TGCGCACGTACAGGCTGGGCACGCAGCTGCCTGGGGACACGGCGGTaGCGGCCGCCTGGTGCTTGGCGGGCCGATGGGCCAGCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: CARTGWARSCLGTRR*RPPGAWRADGPAGC
Trigger: GCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CTCCCGCGTAAAAGCGCGAGGGATGGCCGATGTGCGCCGGTGGGTTaGCGTGGGCGCGGCCGCCGGGGGCTCCTCGTCCGAGTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: LPRKSARDGRCAPVG*RGRGRRGLLVRVVA
Trigger: GGCAACGACTCGGACGAGGAGCCCCCGGCGGCCGCGCCCACGCCAACCCACCGGCGCACATCGGCCATCCCTCGCGCTTTTACGCGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCTTTCTGGGCAGGGGCTGGGAGGCGGGCGAGGTCTGGGAGGAGCTaGAGGAGGGGGTCTTGGCGAGGCGGGCGGGCGGTGTGGCGCTTC +
Preference number: 5 (lower is better)
Translates to: AFWAGAGRRARSGRS*RRGSWRGGRAVWRF
Trigger: GAAGCGCCACACCGCCCGCCCGCCTCGCCAAGACCCCCTCCTCCAGCTCCTCCCAGACCTCGCCCGCCTCCCAGCCCCTGCCCAGAAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp TTAGCTGTCGCCGGAAGCCCGAGCGGTCGGAGGACTCGCTGCCGCTaGAGAGGGCTGAGGCCACACGCACCAGGCCCAGGCGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: LAVAGSPSGRRTRCR*RGLRPHAPGPGGPR
Trigger: GCGGGGGCCGCCTGGGCCTGGTGCGTGTGGCCTCAGCCCTCTCCAGCGGCAGCGAGTCCTCCGACCGCTCGGGCTTCCGGCGACAGCTAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCCCGCAGTGGCAGGGCCGTGGCGGGAAGCGTGCTGCGCAGGATGTaGGGCACGTCCTCATCTCGGATGCGCCGCCAGGTCGTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: PRSGRAVAGSVLRRM*GTSSSRMRRQVVPG
Trigger: GCCGGGCACGACCTGGCGGCGCATCCGAGATGAGGACGTGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGGCCCTGCCACTGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCTGGCGTGGGCCGCCTaGAGCCGCAGCAGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQLAWAA*SRSSGC
Trigger: GCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCAG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGCGGCCGGTGGGTCTTaGCCTGCCCGCTGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAAAGGS*PARWSP
Trigger: GGGGGACCAGCGGGCAGGCAAAGACCCACCGGCCGC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGCTTTGAGCCGTCCTaGTCTGCGGGGGCGCTCGGG +
Preference number: 5 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAGFEPS*SAGALG
Trigger: CCCGAGCGCCCCCGCAGACAAGGACGGCTCAAAGCC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGGCCAGCTCCGAGGTCTaGGCAGGCCGGTGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTASSEV*AGRCRL
Trigger: GAGCCTACACCGGCCTGCCAAGACCTCGGAGCTGGC...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGCTCCGCCGGAGCGCTaGGGCTCCGGGTTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: WGTSTAQAHGAARPRRRAAPPER*GSGFPE
Trigger: TTCAGGGAACCCGGAGCCCAAGCGCTCCGGCGGAGC...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CGGTGGCGGCCGCCTGGTGCTTGGCGGGCCGATGGGCCAGCAGGTTaGGCAGGGCGGCGGCGCTGCCCATGGCGATCATCTTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: RWRPPGAWRADGPAG*AGRRRCPWRSSCAW
Trigger: CCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCGCCACCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp AGCTCCGAGGTCTTGGCAGGCCGGTGTAGGCTCCGCGACCGCTGCTaGCCGGGGCTCGGGACTTTGGCTGGAGCCGCGGGCTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSEVLAGRCRLRDRC*PGLGTLAGAAGCAR
Trigger: CCTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCTACACCGGCCTGCCAAGACCTCGGAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GGGACTGCCCGAGCCAGCGGTGGCGGCCCACGCCGGGCCGGCCTCTaGATGAACGGGATCCGCACGGGCGATCTCTGCGTCTTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTARASGGGPRRAGL*MNGIRTGDLCVLCC
Trigger: GCAGCACAAGACGCAGAGATCGCCCGTGCGGATCCCGTTCATGCAGAGGCCGGCCCGGCGTGGGCCGCCACCGCTGGCTCGGGCAGTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCAGCAGCCGGATGGTGGCCCGGCTCAGCTCCCCAAAGCTGTCCTTaGAGGGCCCGGAGCCGTGTACTGGGCTGCCCTCGGGGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: PAAGWWPGSAPQSCP*RARSRVLGCPRGSG
Trigger: CCCGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGAGCTGAGCCGGGCCACCATCCGGCTGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 90 bp GGCCCTCGTGCACGAAGGGTGCGGAGATGGGAGCCTTGGCGAGGCTaGGACCGTCCACGTCGCTGCCGAGGAGGGAGAGCTGGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: GPRARRVRRWEPWRG*DRPRRCRGGRAGRR
Trigger: CCGGCGGCCAGCTCTCCCTCCTCGGCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAGGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCCCCACGGCGACCCCCAGGCCCTCGTGCACGAAGGGTGCGGAGATaGGAGCCTTGGCGAGGCTGGGACCGTCCACGTCGCTGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: PPRRPPGPRARRVRR*EPWRGWDRPRRCRG
Trigger: TCCTCGGCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAGGGCCTGGGGGTCGCCGTGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGAGCGTGCCGCACGCGTaGCTCACGATGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTSVPHA*LTMVRL
Trigger: CAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCT...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGGCTTTGAGCCGTCCTaGTCTGCGGGGGCGCTCGGG +
Preference number: 5 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVGFEPS*SAGALG
Trigger: CCCGAGCGCCCCCGCAGACAAGGACGGCTCAAAGCC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGTGCGCGCCGGCGTTTaGGGCACCGGGGAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQVRAGV*GTGEAP
Trigger: CGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCAC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTGCGGAGATGGGAGCCTaGGCGAGGCTGGGACCGTCC +
Preference number: 5 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVAEMGA*ARLGPS
Trigger: GGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGC...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTCCCACCCCCACCCTTTaGGGCTCCGCCGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVPTPTL*GSAGAL
Trigger: AAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGGG...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp CCCACCGCCATCACCGCAGCAGCCCCACGACCCTCCATCGGTGGCTaGGCTCAGGGTGGCTACCTGTGTGGCCCGCACCCCCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: PTAITAAAPRPSIGG*AQGGYLCGPHPLRS
Trigger: GCTGCGCAGGGGGTGCGGGCCACACAGGTAGCCACCCTGAGCTCAGCCACCGATGGAGGGTCGTGGGGCTGCTGCGGTGATGGCGGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 90 bp TGCCCACGGCGCCCAGGTCCCACAGCAGCTCCTGGTCACGGGCGCTaGGGGCCGACAGGTTCCAGAGCGTGCCGCACGCGTTGCTCACGA +
Preference number: 5 (lower is better)
Translates to: CPRRPGPTAAPGHGR*GPTGSRACRTRCSR
Trigger: TCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCGCCCGTGACCAGGAGCTGCTGTGGGACCTGGGCGCCGTGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp AGCCCGAGCGGCGCATGGCCACGCAGCTCTCGGGCGAGCTGGACATaGCCAGCAGCGTGCGCGCTGTATCCTCCTGGTCGCGCGTCGCCA +
Preference number: 5 (lower is better)
Translates to: SPSGAWPRSSRASWT*PAACALYPPGRASP
Trigger: TGGCGACGCGCGACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCTGCGTGGCCATGCGCCGCTCGGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp AAGCAGTACACGGCCTCCTCAGTGGGCGTCGTGAGGCACAGCGACTaGAGCGCCCCGTCCCCGCGGGTCCGGCCGGGCTTTGAGCCGTCC +
Preference number: 5 (lower is better)
Translates to: KQYTASSVGVVRHSD*SAPSPRVRPGFEPS
Trigger: GGACGGCTCAAAGCCCGGCCGGACCCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGGAGGCCGTGTACTGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGAGCTTGGCCTTGGCCTaGGCCGCCACGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQSLALA*AATAAS
Trigger: GGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGAGCGCCAGCTTGGCCTaGGCCTTGGCCGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQSASLA*ALAATA
Trigger: AGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTAGCGCGGAGGCCACCTaGCGCAGCCGGGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVSAEAT*RSRAGT
Trigger: CGTGCCTGCCCGGCTGCGCAAGGTGGCCTCCGCGCT...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAGCCCTGCTCTGTTCTaGCCCGCGCCCCGAGACTGC +
Preference number: 5 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVSPALF*PAPRDC
Trigger: GCAGTCTCGGGGCGCGGGCAAGAACAGAGCAGGGCT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGGAAGGGCCGCGCGCTCAGGGCTGGGCCAGGACGCCCTTGCCAGCGCTCCACGCCAGAAAGGCTGGCCTaGCCCATGCTGGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: GKGRALRAGPGRPCQRSTPERLA*PMLGMG
Trigger: TCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTGG...CGTGGAGCGCTGGCAAGGGCGTCCTGGCCCAGCCCTGAGCGCGCGGCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp AGTCGTTGCCGTAGAAGCAGTACACGGCCTCCTCAGTGGGCGTCGTaGGGCACAGCGACTGGAGCGCCCCGTCCCCGCGGGTCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: SRCRRSSTRPPQWAS*GTATGAPRPRGSGR
Trigger: CCGGCCGGACCCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGGAGGCCGTGTACTGCTTCTACGGCAACGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp TCCTTGCGCGCCAGGCCCTGGTCCGGCTGCGAGAAGACGATGTTGTaGAGCGCCGCGTTGGCGCGCATGCGTGCGTCCTTGGCGCCCGGT +
Preference number: 5 (lower is better)
Translates to: SLRARPWSGCEKTML*SAALARMRASLAPG
Trigger: ACCGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp CCGGGGCTGTCGGGCAGCTCGCTAGGGCTGATGGTGCCGCTGCCCTaGCCGCTGCAAGGTTCACTGGGGATGGAGCTGGCGATGGACGGG +
Preference number: 5 (lower is better)
Translates to: PGLSGSSLGLMVPLP*PLQGSLGMELAMDG
Trigger: CCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCGGCACCATCAGCCCTAGCGAGCTGCCCGACAGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CGACCCCCAGGCCCTCGTGCACGAAGGGTGCGGAGATGGGAGCCTTaGCGAGGCTGGGACCGTCCACGTCGCTGCCGAGGAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: RPPGPRARRVRRWEP*RGWDRPRRCRGGRA
Trigger: AGCTCTCCCTCCTCGGCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAGGGCCTGGGGGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CAAGCCCACCGCCATCACCGCAGCAGCCCCACGACCCTCCATCGGTaGCTGAGCTCAGGGTGGCTACCTGTGTGGCCCGCACCCCCTGCG +
Preference number: 5 (lower is better)
Translates to: QAHRHHRSSPTTLHR*LSSGWLPVWPAPPA
Trigger: CGCAGGGGGTGCGGGCCACACAGGTAGCCACCCTGAGCTCAGCCACCGATGGAGGGTCGTGGGGCTGCTGCGGTGATGGCGGTGGGCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CAA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCGCGGCGCTAGAGAAGTaGACCGGCGTGCCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: GADEDPLSPWCREARWPGAALEK*TGVPSA
Trigger: CGCGGAGGGCACGCCGGTCAACTTCTCTAGCGCCGC...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCGGCCGGTGGGTCTTaGCCTGCCCGCTGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRAAGGS*PARWSP
Trigger: GGGGGACCAGCGGGCAGGCAAAGACCCACCGGCCGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCTGCAGGACGAGGCGTaGCCCCAGTCACGGAGACCC +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQLQDEA*PQSRRP
Trigger: GGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGGGCTGGCAGCCATGTaGCGCACCTTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQGLAAM*RTLLLG
Trigger: GCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCCC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GGCGCGAGGCGCGGATCTGTGCCCGCTGCACCATCTCGTCCGAGGTaGCGAAGCGCTCCTCCATCAGCGAGCGGATGTGCTGGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: GARRGSVPAAPSRPR*RSAPPSASGCAGPR
Trigger: TCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGGTGCAGCGGGCACAGATCCGCGCCTCGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp GGAGCTCCTCACTGTCGGAGGCCAGCTGGGCCACGATGGCCTCCATaGAGCCGCGGCGCGCACACAGGGTGGCCTTGTTGGCAACGTCCC +
Preference number: 5 (lower is better)
Translates to: GAPHCRRPAGPRWPP*SRGAHTGWPCWQRP
Trigger: GGGACGTTGCCAACAAGGCCACCCTGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAGTGAGGAGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp GTGCAGGGCGGAGATGTCCTCCACCAGCTGGTCGATGCGCGCCACTaGAAGCGCCAGCTTGGCCTTGGCCTTGGCCGCCACGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VQGGDVLHQLVDARH*KRQLGLGLGRHGCL
Trigger: GAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACATCTCCGCCCTGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCACCTGGTGGAGCTCCTCACTGTCGGAGGCCAGCTGGGCCACGATaGCCTCCATGCAGCCGCGGCGCGCACACAGGGTGGCCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: PPGGAPHCRRPAGPR*PPCSRGAHTGWPCW
Trigger: CCAACAAGGCCACCCTGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAGTGAGGAGCTCCACCAGGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp AGATTACGCAGCATGCCCACGGCGCCCAGGTCCCACAGCAGCTCCTaGTCACGGGCGCTGCGGGCCGACAGGTTCCAGAGCGTGCCGCAC +
Preference number: 5 (lower is better)
Translates to: RLRSMPTAPRSHSSS*SRALRADRFQSVPH
Trigger: GTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCGCCCGTGACCAGGAGCTGCTGTGGGACCTGGGCGCCGTGGGCATGCTGCGTAATCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS-3UTR CAA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCGCATGCGTGCGTCCTaGGCGCCCGGTGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRRMRAS*APGAPG
Trigger: CCCAGGGGCACCGGGCGCCAAGGACGCACGCATGCG...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTTGTGCAGCGCCGCGTaGGCGCGCATGCGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQLCSAA*ARMRAS
Trigger: GGACGCACGCATGCGCGCCAACGCGGCGCTGCACAA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTTGTGCAGCGCCGCGTaGGCGCGCATGCGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVLCSAA*ARMRAS
Trigger: GGACGCACGCATGCGCGCCAACGCGGCGCTGCACAA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGGACGCGCATCTCCTaGCGCGCCAGGCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LAAMLRTLLLGKASRAGARTRIS*RARPWS
Trigger: GGACCAGGGCCTGGCGCGCAAGGAGATGCGCGTCCT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCTCCTTCTCTGCCTCCTaGCCGCCTCGGCGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPSFSAS*PPRRVG
Trigger: GCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGGA...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAGCTTGGCCTTGGCCTaGGCCGCCACGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQSLALA*AATAAS
Trigger: GGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCGCCAGCTTGGCCTaGGCCTTGGCCGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: LAAMLRTLLLGKASRAGASASLA*ALAATA
Trigger: AGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCCAGCGGTGGCGTCTaGCTCCGGCTGGGAGGCATG +
Preference number: 5 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQASGGV*LRLGGM
Trigger: CATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCAGCGCGGAGGCCACCTaGCGCAGCCGGGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSAEAT*RSRAGT
Trigger: CGTGCCTGCCCGGCTGCGCAAGGTGGCCTCCGCGCT...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGCGGCCGGTGGGTCTTaGCCTGCCCGCTGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEAAGGS*PARWSP
Trigger: GGGGGACCAGCGGGCAGGCAAAGACCCACCGGCCGC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCGGAGATGGGAGCCTaGGCGAGGCTGGGACCGTCC +
Preference number: 5 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAAEMGA*ARLGPS
Trigger: GGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGCCACGTGTGGTCATGTaGGGGGCCAGTGGCGGTCAC +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQPRVVM*GASGGH
Trigger: GTGACCGCCACTGGCCCCCAACATGACCACACGTGG...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp GGCAGGGCTGGCTGGCTCCCCGGTGGCCGCGGCCGCAGCCAGGGATaGCGGTGCATCGTCGTCGTCAAAGCAGCCCGAATCGGAAGCATA +
Preference number: 5 (lower is better)
Translates to: GRAGWLPGGRGRSQG*RCIVVVKAARIGSI
Trigger: TATGCTTCCGATTCGGGCTGCTTTGACGACGACGATGCACCGTCATCCCTGGCTGCGGCCGCGGCCACCGGGGAGCCAGCCAGCCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp CGGACGAGGCCTCCCGCGTGGCAGCTGCTGCCTGGTGCAGCCACGTaGCAATTGAATTGGCGCCCTCCTGGATGGCGCGCCACTCCACGC +
Preference number: 5 (lower is better)
Translates to: RTRPPAWQLLPGAAT*QLNWRPPGWRATPR
Trigger: GCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp GAGGCCCGACAAGACCCGCCCCTCTCTGGCTTTGGGTTGCCCCTCTaGGGAACCTGCAGGGCAGGAGTGCCCAAGGGCAGGGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: EARQDPPLSGFGLPL*GTCRAGVPKGRVGG
Trigger: CCCTCCCACCCTGCCCTTGGGCACTCCTGCCCTGCAGGTTCCTCAGAGGGGCAACCCAAAGCCAGAGAGGGGCGGGTCTTGTCGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 90 bp ACGTGCAGGACGCGCATCTCCTTGCGCGCCAGGCCCTGGTCCGGCTaGGAGAAGACGATGTTGTGCAGCGCCGCGTTGGCGCGCATGCGT +
Preference number: 5 (lower is better)
Translates to: TCRTRISLRARPWSG*EKTMLCSAALARMR
Trigger: ACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAAGGAGATGCGCGTCCTGCACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp CGTGGAGGATTTGCAGCAGCAGAGGCAGACAGCCCGAGCGGCGCATaGCCACGCAGCTCTCGGGCGAGCTGGACATGGCCAGCAGCGTGC +
Preference number: 5 (lower is better)
Translates to: RGGFAAAEADSPSGA*PRSSRASWTWPAAC
Trigger: GCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCTGCGTGGCCATGCGCCGCTCGGGCTGTCTGCCTCTGCTGCTGCAAATCCTCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp TGCTCCAGCACGTGCAGGACGCGCATCTCCTTGCGCGCCAGGCCCTaGTCCGGCTGCGAGAAGACGATGTTGTGCAGCGCCGCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: CSSTCRTRISLRARP*SGCEKTMLCSAALA
Trigger: CGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAAGGAGATGCGCGTCCTGCACGTGCTGGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp GCTGGTCGATGCGCGCCACTGCAAGCGCCAGCTTGGCCTTGGCCTTaGCCGCCACGGCTGCCTCCCCACTGGTGTCCTTCTCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: AGRCAPLQAPAWPWP*PPRLPPHWCPSLPP
Trigger: AGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCACCAGCTGGTCGATGCGCGCCACTGCAAGCGCCAGCTTGGCCTTaGCCTTGGCCGCCACGGCTGCCTCCCCACTGGTGTCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PPAGRCAPLQAPAWP*PWPPRLPPHWCPSL
Trigger: CAGAGAAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CAGGGAGGAGTCACTGTCATCCAGGTCACCACCCTCGCTGGGGCCTaGGCGGCCGGCCGAGGACAGCGAGGAAAGGGAGCTGCATCGGGA +
Preference number: 5 (lower is better)
Translates to: QGGVTVIQVTTLAGA*AAGRGQRGKGAASG
Trigger: TCCCGATGCAGCTCCCTTTCCTCGCTGTCCTCGGCCGGCCGCCCAGGCCCCAGCGAGGGTGGTGACCTGGATGACAGTGACTCCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTGCGAGAAGACGATGTaGTGCAGCGCCGCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQACEKTM*CSAALA
Trigger: CGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCACGAGGCTGGACACATaGCGGAGGATGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LAAMLRTLLLGKASRAGATRLDT*RRMPPP
Trigger: CGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCGT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCCTGGCACTGCCGCTGTaGAGGCTGTCGTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQALALPL*RLSLER
Trigger: CCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCAG...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTCCGGGGCTCGGGACTTaGGCTGGAGCCGCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSPGLGT*AGAAGC
Trigger: ACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGG...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGCCGGGGCTCGGGACTTaGGCTGGAGCCGCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEPGLGT*AGAAGC
Trigger: ACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGG...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCCAGCTCCGAGGTCTaGGCAGGCCGGTGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAASSEV*AGRCRL
Trigger: GAGCCTACACCGGCCTGCCAAGACCTCGGAGCTGGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCTGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGG +
Preference number: 5 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGWARTP*PALHGR
Trigger: CCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCA...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCCCACCCCCACCCTTTaGGGCTCCGCCGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEPTPTL*GSAGAL
Trigger: AAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGGG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGAGGCAGGGGGATCCGTaGGCCTCTGCCCCTCCCACC +
Preference number: 5 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGERQGDP*ASAPPT
Trigger: GGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCCT...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGAGGCAGGGGGATCCGTaGGCCTCTGCCCCTCCCACC +
Preference number: 5 (lower is better)
Translates to: AVAPTAGDGEGESELRTRRQGDP*ASAPPT
Trigger: GGTGGGAGGGGCAGAGGCCAACGGATCCCCCTGCCT...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCGGGAGAGAACGTTAAGGCACGTGGGGCATaGAGCGTGTGCCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: QRRPMGQPDRAAGPGENVKARGA*SVCLQP
Trigger: AGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTT...AACGTTCTCTCCCGGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TGGGGGACGTCTACAGCGCAGGCCCATGGGGCAGCCAGACCGCGCCGCAGGGCCAACAACCTGACAGCCTaGCCTGGCTGCGAGGTCCTA +
Preference number: 5 (lower is better)
Translates to: WGTSTAQAHGAARPRRRANNLTA*PGCEVL
Trigger: TAGGACCTCGCAGCCAGGCAAGGCTGTCAGGTTGTT...GGCCCTGCGGCGCGGTCTGGCTGCCCCATGGGCCTGCGCTGTAGACGTCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGGCAGACGAGGACCCCTaGTCACCCTGGTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQADEDP*SPWCRE
Trigger: CTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGC...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CACGGGCGCTGCGGGCCGACAGGTTCCAGAGCGTGCCGCACGCGTTaGTCACGATGGTCAGGCTGTGCGAAGTCAGATGCTGCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: HGRCGPTGSRACRTR*SRWSGCAKSDAAAA
Trigger: CGCTGCTGCAGCATCTGACTTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCGCCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp CGCAGGGCGGCGGCGCTGCCCATGGCGATCATCTTGTGCTTGGAGTaGACCAGATTACGCAGCATGCCCACGGCGCCCAGGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: RRAAALPMAIILCLE*TRLRSMPTAPRSHS
Trigger: GCTGTGGGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp CTGCATCGGGACAGCGAGAGTGGCCCCTCTTGCGCCGCCAGTTTCTaGAGTGCCTTGCTGGCCACAGACAGCGGGGCAGCCGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LHRDSESGPSCAASF*SALLATDSGAAASF
Trigger: GAAGCTGGCGGCTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCGCTGTCCCGATGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GAGTCGGACTCGGACGAGGCCTCCCGCGTGGCAGCTGCTGCCTGGTaGAGCCACGTGACAATTGAATTGGCGCCCTCCTGGATGGCGCGC +
Preference number: 5 (lower is better)
Translates to: ESDSDEASRVAAAAW*SHVTIELAPSWMAR
Trigger: GCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGTCCGAGTCCGACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GGCCTCTGCATGAACGGGATCCGCACGGGCGATCTCTGCGTCTTGTaGTGCTTCGCCAGAAGGGTGCGCGCCGGCGTTTTGGGCACCGGG +
Preference number: 5 (lower is better)
Translates to: GLCMNGIRTGDLCVL*CFARRVRAGVLGTG
Trigger: CCCGGTGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCGGATCCCGTTCATGCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GGTTGCGCAGGGCGGCGGCGCTGCCCATGGCGATCATCTTGTGCTTaGAGTGCACCAGATTACGCAGCATGCCCACGGCGCCCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: GCAGRRRCPWRSSCA*SAPDYAACPRRPGP
Trigger: GGGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp GCGCGAAGCCAGTGCGGCCAGCGGGCAGGGCAGCATATGTTCGCGTaGGCAGTACCCGTCGCTGGCACTGCCGCTGTTGAGGCTGTCGTT +
Preference number: 5 (lower is better)
Translates to: ARSQCGQRAGQHMFA*AVPVAGTAAVEAVV
Trigger: AACGACAGCCTCAACAGCGGCAGTGCCAGCGACGGGTACTGCCCACGCGAACATATGCTGCCCTGCCCGCTGGCCGCACTGGCTTCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCGAGAGTGGCCCCTCTTGCGCCGCCAGTTTCTGCAGTGCCTTGCTaGCCACAGACAGCGGGGCAGCCGCCAGCTTCTCGGGAACCTTGC +
Preference number: 5 (lower is better)
Translates to: ARVAPLAPPVSAVPC*PQTAGQPPASREPC
Trigger: GCAAGGTTCCCGAGAAGCTGGCGGCTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GGCTCAGCACAAGCGGTGTCTCCTGCACGTAGTTCTCCGACGAGCTaGACGGCGTGGCGTCTTCCACCCCCAGGCCCCGGCCTCGGTTAC +
Preference number: 5 (lower is better)
Translates to: GSAQAVSPARSSPTS*TAWRLPPPGPGLGY
Trigger: GTAACCGAGGCCGGGGCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGTCGGAGAACTACGTGCAGGAGACACCGCTTGTGCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CGCTGCCCTGCCCGCTGCAAGGTTCACTGGGGATGGAGCTGGCGATaGACGGGCTCTCGAAGCTGCCCAGCGAGCTCACAGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RCPARCKVHWGWSWR*TGSRSCPASSQSCS
Trigger: GCTGCAGCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp TGGTGCCGCTGCCCTGCCCGCTGCAAGGTTCACTGGGGATGGAGCTaGCGATGGACGGGCTCTCGAAGCTGCCCAGCGAGCTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: WCRCPARCKVHWGWS*RWTGSRSCPASSQS
Trigger: GCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCGGCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp TGCCCCTCTGAGGAACCTGCAGGGCAGGAGTGCCCAAGGGCAGGGTaGGAGGGGCACAGGGACTGGAAGTCAGGTGGCAGAGGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: CPSEEPAGQECPRAG*EGHRDWKSGGRGWH
Trigger: GTGCCAGCCTCTGCCACCTGACTTCCAGTCCCTGTGCCCCTCCCACCCTGCCCTTGGGCACTCCTGCCCTGCAGGTTCCTCAGAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 90 bp GGCTGGGAAGTCCAGGCTGGAGGCCCGACAAGACCCGCCCCTCTCTaGCTTTGGGTTGCCCCTCTGAGGAACCTGCAGGGCAGGAGTGCC +
Preference number: 5 (lower is better)
Translates to: GWEVQAGGPTRPAPL*LWVAPLRNLQGRSA
Trigger: GGCACTCCTGCCCTGCAGGTTCCTCAGAGGGGCAACCCAAAGCCAGAGAGGGGCGGGTCTTGTCGGGCCTCCAGCCTGGACTTCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CAA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGTCCCCAAAGCTGTCCTaGGAGGGCCCGGAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGSPKLS*EGPEPC
Trigger: ACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGA...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCATGCGTGCGTCCTaGGCGCCCGGTGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LISELPAAAVITGFAPARRMRAS*APGAPG
Trigger: CCCAGGGGCACCGGGCGCCAAGGACGCACGCATGCG...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGTGCGAGAAGACGATGTaGTGCAGCGCCGCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQCEKTM*CSAALA
Trigger: CGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCA...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCAGCTTGGCCTTGGCCTaGGCCGCCACGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGSLALA*AATAAS
Trigger: GGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCT...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCTGGCGTGGGCCGCCTaGAGCCGCAGCAGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMLAWAA*SRSSGC
Trigger: GCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCAG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCACTGGCGTGGGCCGCCTaGAGCCGCAGCAGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: ATWWLASPFPYPLAIRGALAWAA*SRSSGC
Trigger: GCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCAG...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTGCCAGCGGTGGCGTCTaGCTCCGGCTGGGAGGCATG +
Preference number: 5 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSASGGV*LRLGGM
Trigger: CATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGGC...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGGGGGACGTGCTGGAGTaGGTCTTGGGGGCGGCGACC +
Preference number: 5 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRGDVLE*VLGAAT
Trigger: GGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCCC...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGCTCCGCCGGAGCGCTaGGGCTCCGGGTTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEAPPER*GSGFPE
Trigger: TTCAGGGAACCCGGAGCCCAAGCGCTCCGGCGGAGC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGAAGGCACGTGGGGCATaGAGCGTGTGCCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQKARGA*SVCLQP
Trigger: AGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTT...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCAGCGCGCTGGCTTCTTaGTGCCTCTGGCCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQASALAS*CLWPSS
Trigger: AGAAGACGGCCAGAGGCACAAAGAAGCCAGCGCGCT...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS TCA 90 bp GGCCTCCCGCGTGGCAGCTGCTGCCTGGTGCAGCCACGTGACAATTaGATTGGCGCCCTCCTGGATGGCGCGCCACTCCACGCTATCCAG +
Preference number: 5 (lower is better)
Translates to: GLPRGSCCLVQPRDN*IGALLDGAPLHAIQ
Trigger: CTGGATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp GTCTGCTGCACTCGGTCCTGCGCCTCCAGCAGCTCCTTGTCAATCTaGTCCAGGCGCGAGGCGCGGATCTGTGCCCGCTGCACCATCTCG +
Preference number: 5 (lower is better)
Translates to: VCCTRSCASSSSLSI*SRREARICARCTIS
Trigger: CGAGATGGTGCAGCGGGCACAGATCCGCGCCTCGCGCCTGGAGCAGATTGACAAGGAGCTGCTGGAGGCGCAGGACCGAGTGCAGCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp GCATGGCCACGCAGCTCTCGGGCGAGCTGGACATGGCCAGCAGCGTaGGCGCTGTATCCTCCTGGTCGCGCGTCGCCAACATGGACAACA +
Preference number: 5 (lower is better)
Translates to: AWPRSSRASWTWPAA*ALYPPGRASPTWTT
Trigger: TGTTGTCCATGTTGGCGACGCGCGACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCTGCGTGGCCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp GCAGCTCCTGGTCACGGGCGCTGCGGGCCGACAGGTTCCAGAGCGTaGCGCACGCGTTGCTCACGATGGTCAGGCTGTGCGAAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: AAPGHGRCGPTGSRA*RTRCSRWSGCAKSD
Trigger: ATCTGACTTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCGCCCGTGACCAGGAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp AGCAGGTTGCGCAGGGCGGCGGCGCTGCCCATGGCGATCATCTTGTaGTTGGAGTGCACCAGATTACGCAGCATGCCCACGGCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SRLRRAAALPMAIIL*LECTRLRSMPTAPR
Trigger: CCTGGGCGCCGTGGGCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp ACAGCGAGAGTGGCCCCTCTTGCGCCGCCAGTTTCTGCAGTGCCTTaGTGGCCACAGACAGCGGGGCAGCCGCCAGCTTCTCGGGAACCT +
Preference number: 5 (lower is better)
Translates to: TARVAPLAPPVSAVP*WPQTAGQPPASREP
Trigger: AGGTTCCCGAGAAGCTGGCGGCTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CGAGAAGTTCTCGTCTGGCTTCTCCACGGTAAAGCGCACGCTGCCTaGGTCCAGCTCAGATGGCAGCCGGCAGCGCTCCCGGCAGTCGGC +
Preference number: 5 (lower is better)
Translates to: REVLVWLLHGKAHAA*VQLRWQPAALPAVG
Trigger: GCCGACTGCCGGGAGCGCTGCCGGCTGCCATCTGAGCTGGACGCAGGCAGCGTGCGCTTTACCGTGGAGAAGCCAGACGAGAACTTCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CTCTGCATGAACGGGATCCGCACGGGCGATCTCTGCGTCTTGTGCTaGTTCGCCAGAAGGGTGCGCGCCGGCGTTTTGGGCACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: LCMNGIRTGDLCVLC*FARRVRAGVLGTGE
Trigger: CTCCCCGGTGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCGGATCCCGTTCATGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCACCTTGCTGTTGCCCGGCTGAGGGGTGCCATCCTCAGGGTGTGTaGGGACCTCTGTCTCGGGGTCCTCGTCCACCGGCACCGACTTCA +
Preference number: 5 (lower is better)
Translates to: PPCCCPAEGCHPQGV*GPLSRGPRPPAPTS
Trigger: TGAAGTCGGTGCCGGTGGACGAGGACCCCGAGACAGAGGTCCCCACACACCCTGAGGATGGCACCCCTCAGCCGGGCAACAGCAAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp CGGGCCGATGGGCCAGCAGGTTGCGCAGGGCGGCGGCGCTGCCCATaGCGATCATCTTGTGCTTGGAGTGCACCAGATTACGCAGCATGC +
Preference number: 5 (lower is better)
Translates to: RADGPAGCAGRRRCP*RSSCAWSAPDYAAC
Trigger: GCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATCGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp GCTGCTGCCTGGTGCAGCCACGTGACAATTGAATTGGCGCCCTCCTaGATGGCGCGCCACTCCACGCTATCCAGGTCGGAGGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: AAAWCSHVTIELAPS*MARHSTLSRSEARS
Trigger: GGACCGGGCCTCCGACCTGGATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GAAGTCCAGGCTGGAGGCCCGACAAGACCCGCCCCTCTCTGGCTTTaGGTTGCCCCTCTGAGGAACCTGCAGGGCAGGAGTGCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: EVQAGGPTRPAPLWL*VAPLRNLQGRSAQG
Trigger: CCCTTGGGCACTCCTGCCCTGCAGGTTCCTCAGAGGGGCAACCCAAAGCCAGAGAGGGGCGGGTCTTGTCGGGCCTCCAGCCTGGACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTCCCCAAAGCTGTCCTaGGAGGGCCCGGAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGESPKLS*EGPEPC
Trigger: ACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGCCTCCAGCAGCTCCTaGTCAATCTGCTCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVASSSS*SICSRR
Trigger: GCGCCTGGAGCAGATTGACAAGGAGCTGCTGGAGGC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTGCGAGAAGACGATGTaGTGCAGCGCCGCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVCEKTM*CSAALA
Trigger: CGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGACTGCAAGCGCCAGCTaGGCCTTGGCCTTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWTASAS*ALALAA
Trigger: GGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCACTGCAAGCGCCAGCTaGGCCTTGGCCTTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGTASAS*ALALAA
Trigger: GGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGT...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCCTGGCACTGCCGCTGTaGAGGCTGTCGTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPLALPL*RLSLER
Trigger: CCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCAG...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGCTCTGCACCCGCCCTaGAGGCACCCTCAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRALHPP*RHPQAV
Trigger: CACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAGC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGGCTCTGCACCCGCCCTaGAGGCACCCTCAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEALHPP*RHPQAV
Trigger: CACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAGC...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCCGTTTCCTCCTGGACCTCCGCGGCACAGAGGCAAGGTCTTCCGGTGAGGCGCAGCTTCTCGGGAACCTaGCTCAGGTGGTCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: PVSSWTSAAQRQGLPVRRSFSGT*LRWSAG
Trigger: GCCGGCAGACCACCTGAGCAAGGTTCCCGAGAAGCT...GCGCCTCACCGGAAGACCTTGCCTCTGTGCCGCGGAGGTCCAGGAGGAAACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGCGAGAGTGGCCCCTCTaGCGCCGCCAGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRREWPL*RRQFLQ
Trigger: CTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCG...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCAGCGGTGGCGTCTaGCTCCGGCTGGGAGGCATG +
Preference number: 5 (lower is better)
Translates to: TLPASSDPQLLRTGPGALASGGV*LRLGGM
Trigger: CATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGGC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CATCGTACGCAGCCCGCTGCCTTCCCGTCTCCCGCCAAGGGGTGCGACAGGCAGGGCGATCTCTGCGTCTaGTGCTGCTTCGCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: HRTQPAAFPSPAKGCDRQGDLCV*CCFARR
Trigger: CCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCC...CTGCCTGTCGCACCCCTTGGCGGGAGACGGGAAGGCAGCGGGCTGCGTACGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCGGGGACGTGCTGGAGTaGGTCTTGGGGGCGGCGACC +
Preference number: 5 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPGDVLE*VLGAAT
Trigger: GGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCCC...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGG +
Preference number: 5 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAWARTP*PALHGR
Trigger: CCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCTGGGCGTACCTTGAGTaGATTGTCCAGAGACCGCGG +
Preference number: 5 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAWAYLE*IVQRPR
Trigger: CCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCA...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGCCCCCAGTGGGCGTACCTTGAGTaGATTGTCCAGAGACCGCGG +
Preference number: 5 (lower is better)
Translates to: PAAAVITGFAPARRKGPQWAYLE*IVQRPR
Trigger: CCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCA...CTGGGGGCCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AGAGACCGCGGACTGCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGGGTGGGAGGGAGGCCTaGCAGTGGGCGTACCTTGAG +
Preference number: 5 (lower is better)
Translates to: RDRGLPVPFWRQLDWAVRGGREA*QWAYLE
Trigger: CTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACC...CCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGCAGTCCGCGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCTCCTCCCTCCGCCTTaGTCTCAGACGCACCAATGG +
Preference number: 5 (lower is better)
Translates to: GADEDPLSPWCREARWPGLLPPP*SQTHQW
Trigger: CCATTGGTGCGTCTGAGACAAAGGCGGAGGGAGGAG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS TCA 90 bp GCTCCACGTCCTGCTGCACGTAGTGCTCGTGCAAGGCCAGCGCGCTaGGGCTGGAGGCGCACGAGAAGTTCTCGTCTGGCTTCTCCACGG +
Preference number: 5 (lower is better)
Translates to: APRPAARSARARPAR*GWRRTRSSRLASPR
Trigger: CCGTGGAGAAGCCAGACGAGAACTTCTCGTGCGCCTCCAGCCTCAGCGCGCTGGCCTTGCACGAGCACTACGTGCAGCAGGACGTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CCCGGGTCTCCAGAGCTGAGGCTGAAGCTATCGTCGGACGAGGTGTaGAGGGCGGAGATGTCCTCCACCAGCTGGTCGATGCGCGCCACT +
Preference number: 5 (lower is better)
Translates to: PGSPELRLKLSSDEV*RAEMSSTSWSMRAT
Trigger: AGTGGCGCGCATCGACCAGCTGGTGGAGGACATCTCCGCCCTGCACACCTCGTCCGACGATAGCTTCAGCCTCAGCTCTGGAGACCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp TCCCAACGTCAAATGCCCCCACAGGCCTCGGCCGGAGCCTGGTACTaGAGCCTCCAACGCCAGAAGGCAGGCAGCAAAGGCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SQRQMPPQASAGAWY*SLQRQKAGSKGWRS
Trigger: GGACCTCCAGCCTTTGCTGCCTGCCTTCTGGCGTTGGAGGCTGCAGTACCAGGCTCCGGCCGAGGCCTGTGGGGGCATTTGACGTTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 90 bp TCGGGCGAGCTGGACATGGCCAGCAGCGTGCGCGCTGTATCCTCCTaGTCGCGCGTCGCCAACATGGACAACAGCCAGAAGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: SGELDMASSVRAVSS*SRVANMDNSQKTTS
Trigger: GGAGGTGGTCTTCTGGCTGTTGTCCATGTTGGCGACGCGCGACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp CTATCGTCGGACGAGGTGTGCAGGGCGGAGATGTCCTCCACCAGCTaGTCGATGCGCGCCACTGCAAGCGCCAGCTTGGCCTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LSSDEVCRAEMSSTS*SMRATASASLALAL
Trigger: CAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACATCTCCGCCCTGCACACCTCGTCCGACGATAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp ATGGAGTCGGACTCGGACGAGGCCTCCCGCGTGGCAGCTGCTGCCTaGTGCAGCCACGTGACAATTGAATTGGCGCCCTCCTGGATGGCG +
Preference number: 5 (lower is better)
Translates to: MESDSDEASRVAAAA*CSHVTIELAPSWMA
Trigger: CGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGTCCGAGTCCGACTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GCTGTAGGGTGGATCCCACTGACAGCCCGGATACGAAGGACAGGATaGAGTCGGACTCGGACGAGGCCTCCCGCGTGGCAGCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: AVGWIPLTARIRRTG*SRTRTRPPAWQLLP
Trigger: AGGCAGCAGCTGCCACGCGGGAGGCCTCGTCCGAGTCCGACTCCATCCTGTCCTTCGTATCCGGGCTGTCAGTGGGATCCACCCTACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGACAGGTGGCTGGAGTaGTCCCTTAGCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQDRWLE*SLSSCL
Trigger: GAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCGGGTGGGCAGAGGCCCTGGGGCGACCTATGGGGGACGTCTACAGCGCAGGCCGGCTGGAACTTGAGGTaGTACAGGCTGGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: SGGQRPWGDLWGTSTAQAGWNLR*YRLVMS
Trigger: GGACATCACCAGCCTGTACAACCTCAAGTTCCAGCC...GGCCTGCGCTGTAGACGTCCCCCATAGGTCGCCCCAGGGCCTCTGCCCACCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTCCCCAAAGGTGAGGTaGGTGAGGGTCATGCCCGCG +
Preference number: 5 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGESPKVR*VRVMPA
Trigger: CGCGGGCATGACCCTCACCAACCTCACCTTTGGGGA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGGCACACAGGGTGGCCTaGTTGGCAACGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQAHRVA*LATSPK
Trigger: CTTTGGGGACGTTGCCAACAAGGCCACCCTGTGTGC...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCACACAGGGTGGCCTaGTTGGCAACGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAAHRVA*LATSPK
Trigger: CTTTGGGGACGTTGCCAACAAGGCCACCCTGTGTGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCACCTTCTTGCTGTaGATGTCGGCCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GADEDPLSPWCREARWPGSTFLL*MSALQD
Trigger: GTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGCT...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGACGAGGCTGGACACATaGCGGAGGATGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: TLPASSDPQLLRTGPGALTRLDT*RRMPPP
Trigger: CGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCGT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTCCAGCGCCCGCTGCTaGCGCACGTACAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSSARC*RTYRLG
Trigger: GCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGTCCTTCTCTGCCTCCTaGCCGCCTCGGCGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMSFSAS*PPRRVG
Trigger: GCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGGA...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTGTGGCCCCCACGGCAGGGGATGGAGAAGGCGAAAGTGAGCTCAGGACTCGGCTGGCACTGCCGCTGTaGAGGCTGTCGTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AVAPTAGDGEGESELRTRLALPL*RLSLER
Trigger: CCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCAG...CCGAGTCCTGAGCTCACTTTCGCCTTCTCCATCCCCTGCCGTGGGGGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCGAGAGTGGCCCCTCTaGCGCCGCCAGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWREWPL*RRQFLQ
Trigger: CTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCG...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGCGGCGCTAGAGAAGTaGACCGGCGTGCCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: LISELPAAAVITGFAPARAALEK*TGVPSA
Trigger: CGCGGAGGGCACGCCGGTCAACTTCTCTAGCGCCGC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCAGCCCTGCTCTGTTCTaGCCCGCGCCCCGAGACTGC +
Preference number: 5 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPSPALF*PAPRDC
Trigger: GCAGTCTCGGGGCGCGGGCAAGAACAGAGCAGGGCT...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGGCGATCTCTGCGTCTaGTGCTGCTTCGCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPGDLCV*CCFARR
Trigger: CCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: PFPYPLAIRGAAGRGECESVSFP*ASPAAA
Trigger: AGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGA...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCCGCAAAGGTCAGTCTCCTTTCCATaGGCCTCGCCCGCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: RITGGCSDYRLRPCAPQRSVSFP*ASPAAA
Trigger: AGCCGCGGCGGGCGAGGCCAATGGAAAGGAGACTGA...CCTTTGCGGCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGAAGGCACGTGGGGCATaGAGCGTGTGCCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQKARGA*SVCLQP
Trigger: AGGCTGAAGGCACACGCTCAATGCCCCACGTGCCTT...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCTCAGGGACCACCATTaGGCTGTTCCCAGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: GADEDPLSPWCREARWPGLRDHH*AVPRGR
Trigger: TCTCCCTCTGGGAACAGCCAAATGGTGGTCCCTGAG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CAA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTGACGCAGTGTGTGGCTaGCCATGTCATCCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVDAVCG*PCHPAP
Trigger: AGGAGCCGGATGACATGGCAAGCCACACACTGCGTC...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 90 bp TCATCAAAGGACAGCTTCATAACAGCACAGGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGGGCGCTGCCGGCGCCACCTCCCTCG +
Preference number: 5 (lower is better)
Translates to: SSKDSFITAQVAWQI*GSMGIGALPAPPPS
Trigger: CGAGGGAGGTGGCGCCGGCAGCGCCCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGTTATGAAGCTGTCCTTTGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp TGGCGATGGACGGGCTCTCGAAGCTGCCCAGCGAGCTCACAGAGCTaGAGCGGCTCAGCACAAGCGGTGTCTCCTGCACGTAGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: WRWTGSRSCPASSQS*SGSAQAVSPARSSP
Trigger: CGGAGAACTACGTGCAGGAGACACCGCTTGTGCTGAGCCGCTGCAGCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGTCCATCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp AAGGTTCACTGGGGATGGAGCTGGCGATGGACGGGCTCTCGAAGCTaGCCAGCGAGCTCACAGAGCTGCAGCGGCTCAGCACAAGCGGTG +
Preference number: 5 (lower is better)
Translates to: KVHWGWSWRWTGSRS*PASSQSCSGSAQAV
Trigger: CACCGCTTGTGCTGAGCCGCTGCAGCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp CCAGCAGCGTGCGCGCTGTATCCTCCTGGTCGCGCGTCGCCAACATaGACAACAGCCAGAAGACCACCTCCACCTTGCTGTTGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: PAACALYPPGRASPT*TTARRPPPPCCCPA
Trigger: AGCCGGGCAACAGCAAGGTGGAGGTGGTCTTCTGGCTGTTGTCCATGTTGGCGACGCGCGACCAGGAGGATACAGCGCGCACGCTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp TGCGGGCCGACAGGTTCCAGAGCGTGCCGCACGCGTTGCTCACGATaGTCAGGCTGTGCGAAGTCAGATGCTGCAGCAGCGTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: CGPTGSRACRTRCSR*SGCAKSDAAAASAD
Trigger: GTCTGCAGACGCTGCTGCAGCATCTGACTTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp CAAGGCCAGCGCGCTGAGGCTGGAGGCGCACGAGAAGTTCTCGTCTaGCTTCTCCACGGTAAAGCGCACGCTGCCTGCGTCCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: QGQRAEAGGAREVLV*LLHGKAHAACVQLR
Trigger: TCTGAGCTGGACGCAGGCAGCGTGCGCTTTACCGTGGAGAAGCCAGACGAGAACTTCTCGTGCGCCTCCAGCCTCAGCGCGCTGGCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp TTGGCTGTTCCCAGAGGGAGAAACGAGGCCCTAGGAACCGAGGTCTaGCACCCAGATGCTGCCCCAGAGGGGCTGGGAAGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LAVPRGRNEALGTEV*HPDAAPEGLGSPGW
Trigger: CCAGCCTGGACTTCCCAGCCCCTCTGGGGCAGCATCTGGGTGCCAGACCTCGGTTCCTAGGGCCTCGTTTCTCCCTCTGGGAACAGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCCTCCAGCAGCTCCTaGTCAATCTGCTCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWASSSS*SICSRR
Trigger: GCGCCTGGAGCAGATTGACAAGGAGCTGCTGGAGGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCCGCATGCGTGCGTCCTaGGCGCCCGGTGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPRMRAS*APGAPG
Trigger: CCCAGGGGCACCGGGCGCCAAGGACGCACGCATGCG...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGTGGCAGATGGCCGCCTaGTTCTCTGTGCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQWQMAA*FSVLCA
Trigger: TGCACACAGCACAGAGAACAAGGCGGCCATCTGCCA...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GTAATGCTGTCGGAGCTCGGGAGGACCATGCCGGTGGGCACGGCGCCCCGAGTTTGGCAGATGGCCGCCTaGTTCTCTGTGCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: VMLSELGRTMPVGTAPRVWQMAA*FSVLCA
Trigger: TGCACACAGCACAGAGAACAAGGCGGCCATCTGCCA...AACTCGGGGCGCCGTGCCCACCGGCATGGTCCTCCCGAGCTCCGACAGCATTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGACGAGGCTGGACACATaGCGGAGGATGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQTRLDT*RRMPPP
Trigger: CGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCGT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGGGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCCCCATGGCGATCATCTaGTGCTTGGAGTGCACCAGA +
Preference number: 5 (lower is better)
Translates to: GADEDPLSPWCREARWPGPMAII*CLECTR
Trigger: TCTGGTGCACTCCAAGCACAAGATGATCGCCATGGG...GCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGACTGCAAGCGCCAGCTaGGCCTTGGCCTTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQTASAS*ALALAA
Trigger: GGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGT...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCAGACGAGGACCCCTTGTCACCCTGGTGCAGAGAGGCCAGGTGGCCAGGCAGCACGTGACAATTGAATaGGCGCCCTCCTGGATGGCG +
Preference number: 5 (lower is better)
Translates to: GRRGPLVTLVQRGQVARQHVTIE*APSWMA
Trigger: CGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTG...CTGCCTGGCCACCTGGCCTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAAGCCCGGCGACTCCTaGATGAAGGTTAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAKPGDS*MKVSCR
Trigger: GCGACAGCTAACCTTCATCAAGGAGTCGCCGGGCTT...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGTGCTGGAGTTGGTCTaGGGGGCGGCGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LISELPAAAVITGFAPARVLELV*GAATSS
Trigger: CGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCAC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: RRPETYICGRQCRTTFLHLHGRD*RPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCTCCACGGTCGGGACTaGAGGCCTAGCGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRLHGRD*RPSGRP
Trigger: GGGGCGGCCGCTAGGCCTCAAGTCCCGACCGTGGAG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGCTGCAGGACGAGGCGTaGCCCCAGTCACGGAGACCC +
Preference number: 5 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMLQDEA*PQSRRP
Trigger: GGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAG...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCGGGCTGGCAGCCATGTaGCGCACCTTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LISELPAAAVITGFAPARGLAAM*RTLLLG
Trigger: GCCCAGCAGCAAGGTGCGCAACATGGCTGCCAGCCC...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGTGAGGCAGACGAGGACCCCTaGTCACCCTGGTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PFPYPLAIRGAAGRGECEADEDP*SPWCRE
Trigger: CTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGC...CTCACACTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp TCCCAGGTGACTCCCGAAGGTCCCGCAACCCGCCCGCCCCAGGCCTaGAGGATCCCGGGAGCTTTGCAAATGGCTGCAAAGTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: SQVTPEGPATRPPQA*RIPGALQMAAKLGL
Trigger: AAGTCCCAACTTTGCAGCCATTTGCAAAGCTCCCGGGATCCTTCAGGCCTGGGGCGGGCGGGTTGCGGGACCTTCGGGAGTCACCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS GCA 90 bp TCCAGCACCTCCGTCTGCCCCGAGGACACCAGCACTCGGGCCTCCTaGTCCAGTTTTCCCTGTAGGTGCTTCAGGACCTCCTTCATGCCC +
Preference number: 5 (lower is better)
Translates to: SSTSVCPEDTSTRAS*SSFPCRCFRTSFMP
Trigger: GGGCATGAAGGAGGTCCTGAAGCACCTACAGGGAAAACTGGAGCAGGAGGCCCGAGTGCTGGTGTCCTCGGGGCAGACGGAGGTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS GCA 90 bp ATCTCGTCCGAGGTGCCGAAGCGCTCCTCCATCAGCGAGCGGATGTaGTGGGCCTCGAACTCAAGCTGCTGCCGGATCAGGTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: ISSEVPKRSSISERM*WASNSSCCRIRSIC
Trigger: GCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGCACCTCGGACGAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp TCTGCGCCAGGTACGATCATGGGCGGGTCTTTTCCCAACGTCAAATaGCCCCACAGGCCTCGGCCGGAGCCTGGTACTGCAGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: SAPGTIMGGSFPNVK*PHRPRPEPGTAASN
Trigger: GTTGGAGGCTGCAGTACCAGGCTCCGGCCGAGGCCTGTGGGGGCATTTGACGTTGGGAAAAGACCCGCCCATGATCGTACCTGGCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 90 bp TCGTCCGAGGTGCCGAAGCGCTCCTCCATCAGCGAGCGGATGTGCTaGGCCTCGAACTCAAGCTGCTGCCGGATCAGGTCCATCTGCATC +
Preference number: 5 (lower is better)
Translates to: SSEVPKRSSISERMC*ASNSSCCRIRSICI
Trigger: GATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGCACCTCGGACGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 90 bp CGGTACTCCTCATCAAAGGACAGCTTCATAACAGCACAGGTGGCCTaGCAGATCTGCGGCTCGATGGGGATCGGGGCGCTGCCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: RYSSSKDSFITAQVA*QICGSMGIGALPAP
Trigger: TGGCGCCGGCAGCGCCCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGTTATGAAGCTGTCCTTTGATGAGGAGTACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp GTCTTTTCCCAACGTCAAATGCCCCCACAGGCCTCGGCCGGAGCCTaGTACTGCAGCCTCCAACGCCAGAAGGCAGGCAGCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: VFSQRQMPPQASAGA*YCSLQRQKAGSKGW
Trigger: CCAGCCTTTGCTGCCTGCCTTCTGGCGTTGGAGGCTGCAGTACCAGGCTCCGGCCGAGGCCTGTGGGGGCATTTGACGTTGGGAAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS-3UTR CAA 90 bp GCCTGTCCCCTTCTGGAGACAGCTGGACTGGGCGGTGAGGTGTGGCTGTGGCCCGGCTGGAACTTGAGGTaGTACAGGCTGGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: ACPLLETAGLGGEVWLWPGWNLR*YRLVMS
Trigger: GGACATCACCAGCCTGTACAACCTCAAGTTCCAGCC...GGGCCACAGCCACACCTCACCGCCCAGTCCAGCTGTCTCCAGAAGGGGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATTTGTGCAGCGCCGCGTaGGCGCGCATGCGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: RRPETYICGRQCRTTFLHLCSAA*ARMRAS
Trigger: GGACGCACGCATGCGCGCCAACGCGGCGCTGCACAA...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTCCCCAAAGGTGAGGTaGGTGAGGGTCATGCCCGCG +
Preference number: 5 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPSPKVR*VRVMPA
Trigger: CGCGGGCATGACCCTCACCAACCTCACCTTTGGGGA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAAGCGTGCCGCACGCGTaGCTCACGATGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ATWWLASPFPYPLAIRGASVPHA*LTMVRL
Trigger: CAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCT...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGAGCGCCAGCTTGGCCTaGGCCTTGGCCGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRSASLA*ALAATA
Trigger: AGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCT...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGCGGCGCTAGAGAAGTaGACCGGCGTGCCCTCCGCG +
Preference number: 5 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIAALEK*TGVPSA
Trigger: CGCGGAGGGCACGCCGGTCAACTTCTCTAGCGCCGC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCACGTGACAATTGAATaGGCGCCCTCCTGGATGGCG +
Preference number: 5 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEHVTIE*APSWMA
Trigger: CGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGCGGAGATGGGAGCCTaGGCGAGGCTGGGACCGTCC +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRAEMGA*ARLGPS
Trigger: GGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCCCACCCCCACCCTTTaGGGCTCCGCCGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRPTPTL*GSAGAL
Trigger: AAGCGCTCCGGCGGAGCCCAAAAGGGTGGGGGTGGG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGCCATGTTGCGCACCTaGCTGCTGGGCAAGGCGTCA +
Preference number: 5 (lower is better)
Translates to: TLPASSDPQLLRTGPGALAMLRT*LLGKAS
Trigger: TGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGTGGGCGTACCTTGAGTaGATTGTCCAGAGACCGCGG +
Preference number: 5 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEWAYLE*IVQRPR
Trigger: CCGCGGTCTCTGGACAATCAACTCAAGGTACGCCCA...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCCACGTGTGGTCATGTaGGGGGCCAGTGGCGGTCAC +
Preference number: 5 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQPRVVM*GASGGH
Trigger: GTGACCGCCACTGGCCCCCAACATGACCACACGTGG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp CGACGAGGCTGGACACATTGCGGAGGATGCCGCCGCCGCTCTCGATaGTGGCCAGCGAGTTGCTCTGACACTTGTAGGTCAGGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: RRGWTHCGGCRRRSR*WPASCSDTCRSGCS
Trigger: TGAGCACCCTGACCTACAAGTGTCAGAGCAACTCGCTGGCCATCATCGAGAGCGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp TCCTCCATCAGCGAGCGGATGTGCTGGGCCTCGAACTCAAGCTGCTaGCGGATCAGGTCCATCTGCATCGAGAACGTCTCCACGTGCGGC +
Preference number: 5 (lower is better)
Translates to: SSISERMCWASNSSC*RIRSICIENVSTCG
Trigger: GCCGCACGTGGAGACGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238483.5
ENST00000593146.1
CDS GCA 90 bp CGCTCCTCCATCAGCGAGCGGATGTGCTGGGCCTCGAACTCAAGCTaGTGCCGGATCAGGTCCATCTGCATCGAGAACGTCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: RSSISERMCWASNSS*CRIRSICIENVSTC
Trigger: GCACGTGGAGACGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238483.5
ENST00000593146.1
CDS GCA 90 bp AGCCCAGGGCGCCATCCACCTGGCAGATGGCCGCCTTGTTCTCTGTaGTGTGTGCAGACAGATTCCACAGGGCGCTCAGCACGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SPGRHPPGRWPPCSL*CVQTDSTGRSARSS
Trigger: TGAAGAGCGTGCTGAGCGCCCTGTGGAATCTGTCTGCACACAGCACAGAGAACAAGGCGGCCATCTGCCAGGTGGATGGCGCCCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 90 bp CGCTCCTCCATCAGCGAGCGGATGTGCTGGGCCTCGAACTCAAGCTaGTGCCGGATCAGGTCCATCTGCATCGAGAACTGCGTCTCCACG +
Preference number: 5 (lower is better)
Translates to: RSSISERMCWASNSS*CRIRSICIENCVST
Trigger: CGTGGAGACGCAGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCATTCAGGGTGGACTCCTaGGTGGCCCGCAGGACACAC +
Preference number: 5 (lower is better)
Translates to: ATWWLASPFPYPLAIRGAFRVDS*VARRTH
Trigger: GTGTGTCCTGCGGGCCACCAAGGAGTCCACCCTGAA...TGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGTTCAGGGTGGACTCCTaGGTGGCCCGCAGGACACAC +
Preference number: 5 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQFRVDS*VARRTH
Trigger: GTGTGTCCTGCGGGCCACCAAGGAGTCCACCCTGAA...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTGGCAGCCATGTTGCGCACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCGCGATCATCTTGTGCTaGGAGTGCACCAGATTACGC +
Preference number: 5 (lower is better)
Translates to: LAAMLRTLLLGKASRAGAAIILC*ECTRLR
Trigger: GCGTAATCTGGTGCACTCCAAGCACAAGATGATCGC...GGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCGGGCCGGGGCGAGCCCATGGCGATCATCTaGTGCTTGGAGTGCACCAGA +
Preference number: 5 (lower is better)
Translates to: ASPFPYPLAIRGAAGRGEPMAII*CLECTR
Trigger: TCTGGTGCACTCCAAGCACAAGATGATCGCCATGGG...CTCGCCCCGGCCCGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCACGCCCACATGTGATGGTCTCCGTAACGTGCAGGCTCCGCTGGGGAGAGGCCACGTGACAATTGAATaGGCGCCCTCCTGGATGGCG +
Preference number: 5 (lower is better)
Translates to: TTPTCDGLRNVQAPLGRGHVTIE*APSWMA
Trigger: CGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTG...GCCTCTCCCCAGCGGAGCCTGCACGTTACGGAGACCATCACATGTGGGCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGTGCTGGAGTTGGTCTaGGGGGCGGCGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIVLELV*GAATSS
Trigger: CGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCAC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCCAGAAAGGCTGGCCTaGCCCATGCTGGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQPERLA*PMLGMG
Trigger: TCCCATCCCCAGCATGGGCAAGGCCAGCCTTTCTGG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGAACAACCTGACAGCCTaGCCTGGCTGCGAGGTCCTA +
Preference number: 5 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWNNLTA*PGCEVL
Trigger: TAGGACCTCGCAGCCAGGCAAGGCTGTCAGGTTGTT...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCTGGACCGGGGCAACAGATGGGGCCGGGTGAGGTAATGCTGTCGGAGCTCGGGAGGGTGAGCACGTGTTaGGCATCCCCAAGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: AGPGQQMGPGEVMLSELGRVSTC*ASPSPK
Trigger: TTTTGGACTTGGGGATGCCAAACACGTGCTCACCCT...CCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTTGCCCCGGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp TCCTCCATCAGCGAGCGGATGTGCTGGGCCTCGAACTCAAGCTGCTaGCGGATCAGGTCCATCTGCATCGAGAACTGCGTCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: SSISERMCWASNSSC*RIRSICIENCVSTC
Trigger: GCACGTGGAGACGCAGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 90 bp AGCTTGGACAGGTGGCTGGAGTTGTCCCTTAGCTCCTGCCTCAGGTaGCTGTTCTCAGCCTTCAAGGCCTCCACCTGCCTCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SLDRWLELSLSSCLR*LFSAFKASTCLTSC
Trigger: GCAGCTGGTGAGGCAGGTGGAGGCCTTGAAGGCTGAGAACAGCCACCTGAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 90 bp GGTGCTTCAGGACCTCCTTCATGCCCGACGTCTCTGTCTCCAGCTTaGACAGGTGGCTGGAGTTGTCCCTTAGCTCCTGCCTCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: GASGPPSCPTSLSPA*TGGWSCPLAPASGG
Trigger: GCCACCTGAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTCCAAGCTGGAGACAGAGACGTCGGGCATGAAGGAGGTCCTGAAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 90 bp GTACAGACAGCTGAACGTCCAACTGACCAGTCGACCGACAGACGATaGGTCGGCCTCTCCTTCCCAGCCCCCAGGACACATCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: VQTAERPTDQSTDRR*VGLSFPAPRTHPDS
Trigger: GCTGTCAGGATGTGTCCTGGGGGCTGGGAAGGAGAGGCCGACCCATCGTCTGTCGGTCGACTGGTCAGTTGGACGTTCAGCTGTCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 90 bp CGGTACTCCTCATCAAAGGACAGCTTCATAACAGCACAGGTGGCCTaGCAGATCTGCGGCTCGATGGGGATCGGGGCTGTGGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: RYSSSKDSFITAQVA*QICGSMGIGAVGTG
Trigger: CCCTGTGCCCACAGCCCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGTTATGAAGCTGTCCTTTGATGAGGAGTACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS-3UTR CAA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGCACACAGGGTGGCCTaGTTGGCAACGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMAHRVA*LATSPK
Trigger: CTTTGGGGACGTTGCCAACAAGGCCACCCTGTGTGC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGTCCCTCAGCACCTTCTaGCTGTTGATGTCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: TLPASSDPQLLRTGPGALSLSTF*LLMSAL
Trigger: GAGGGCCGACATCAACAGCAAGAAGGTGCTGAGGGA...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAGTTCTGTGAGCTTCCAGGCGTCTCCCCATCATCGCTGCCACCACGCTCCCCCTCCCTCAGCACCTTCTaGCTGTTGATGTCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: KFCELPGVSPSSLPPRSPSLSTF*LLMSAL
Trigger: GAGGGCCGACATCAACAGCAAGAAGGTGCTGAGGGA...GGGGGAGCGTGGTGGCAGCGATGATGGGGAGACGCCTGGAAGCTCACAGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAGCGTGCCGCACGCGTaGCTCACGATGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ASRTADGVVLTPDRWLYISVPHA*LTMVRL
Trigger: CAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCGAGAGTGGCCCCTCTaGCGCCGCCAGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRREWPL*RRQFLQ
Trigger: CTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGCCAGCTCCGAGGTCTaGGCAGGCCGGTGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPASSEV*AGRCRL
Trigger: GAGCCTACACCGGCCTGCCAAGACCTCGGAGCTGGC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAAAGGGACAAGATGAGCAGCGGTGCGGTCCTGGGCACTGACCACGCCCACATGGGCGATCTCTGCGTCTaGTGCTGCTTCGCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KRDKMSSGAVLGTDHAHMGDLCV*CCFARR
Trigger: CCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCC...CATGTGGGCGTGGTCAGTGCCCAGGACCGCACCGCTGCTCATCTTGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGCTGCAGGACGAGGCGTaGCCCCAGTCACGGAGACCC +
Preference number: 5 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPLQDEA*PQSRRP
Trigger: GGGTCTCCGTGACTGGGGCAACGCCTCGTCCTGCAG...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGTGGGAGGGAGGCCTaGCAGTGGGCGTACCTTGAG +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRGGREA*QWAYLE
Trigger: CTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGCCACGTGTGGTCATGTaGGGGGCCAGTGGCGGTCAC +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRPRVVM*GASGGH
Trigger: GTGACCGCCACTGGCCCCCAACATGACCACACGTGG...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CACCTTGCTGCTGGGCAAGGCGTCACGGGCAGGAGCCAGCCAGACCCAAGTTCTTCATCCGGCTCCTTCTaGGTCTGTCCTGAGTCTCAG +
Preference number: 5 (lower is better)
Translates to: HLAAGQGVTGRSQPDPSSSSGSF*VCPESQ
Trigger: CTGAGACTCAGGACAGACCAAGAAGGAGCCGGATGA...AGAACTTGGGTCTGGCTGGCTCCTGCCCGTGACGCCTTGCCCAGCAGCAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS TCA 90 bp CACAGGGACTGGAAGTCAGGTGGCAGAGGCTGGCACCTCCCACCCTaGTCCGATGATGTCCAAGGCTGTTCAGGTCTCCAGTGGGGATCA +
Preference number: 5 (lower is better)
Translates to: HRDWKSGGRGWHLPP*SDDVQGCSGLQWGS
Trigger: TGATCCCCACTGGAGACCTGAACAGCCTTGGACATCATCGGATCAGGGTGGGAGGTGCCAGCCTCTGCCACCTGACTTCCAGTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS TCA 90 bp ACACGCGGGGCGGACAGACCACCAGCTGTCCCTGCCGATGGACAATaGAAACACCACGAAGGCCAGTGGGTGACACCTAAGCTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: TRGADRPPAVPADGQ*KHHEGQWVTPKLCR
Trigger: TCTGCACAGCTTAGGTGTCACCCACTGGCCTTCGTGGTGTTTTCATTGTCCATCGGCAGGGACAGCTGGTGGTCTGTCCGCCCCGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 90 bp GGGGTCTGGCTCGAGCCCCATGTTCCAGCTGAGGTCACCATCCCATaGCCAGCCAGGTGGAAGGACCAGATGACGTGCAAAGCAACACAT +
Preference number: 5 (lower is better)
Translates to: GVWLEPHVPAEVTIP*PARWKDQMTCKATH
Trigger: ATGTGTTGCTTTGCACGTCATCTGGTCCTTCCACCTGGCTGGGCATGGGATGGTGACCTCAGCTGGAACATGGGGCTCGAGCCAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 90 bp CCTCCTTCATGCCCGACGTCTCTGTCTCCAGCTTGGACAGGTGGCTaGAGTTGTCCCTTAGCTCCTGCCTCAGGTGGCTGTTCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: PPSCPTSLSPAWTGG*SCPLAPASGGCSQP
Trigger: AGGCTGAGAACAGCCACCTGAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTCCAAGCTGGAGACAGAGACGTCGGGCATGAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 90 bp CATTCAGCGACTTCCCGAGCGTTTACTCTGCGCCAGGTACGATCATaGGCGGGTCTTTTCCCAACGTCAAATGCCCCCACAGGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: HSATSRAFTLRQVRS*AGLFPTSNAPTGLG
Trigger: GCCGAGGCCTGTGGGGGCATTTGACGTTGGGAAAAGACCCGCCCATGATCGTACCTGGCGCAGAGTAAACGCTCGGGAAGTCGCTGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS-3UTR CAA 90 bp AGGGCGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGACAGGTGGCTGGAGTaGTCCCTTAGCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RAPPRDLHMWKAMPHHLPDRWLE*SLSSCL
Trigger: GAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTC...AGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCTCCCCAAAGCTGTCCTaGGAGGGCCCGGAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPSPKLS*EGPEPC
Trigger: ACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGA...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGCCTCCAGCAGCTCCTaGTCAATCTGCTCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRASSSS*SICSRR
Trigger: GCGCCTGGAGCAGATTGACAAGGAGCTGCTGGAGGC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGGCTTCGCCCCTGCGCGCTGGCAGATGGCCGCCTaGTTCTCTGTGCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: LISELPAAAVITGFAPARWQMAA*FSVLCA
Trigger: TGCACACAGCACAGAGAACAAGGCGGCCATCTGCCA...GCGCGCAGGGGCGAAGCCTGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGGCGATCATCTTGTGCTaGGAGTGCACCAGATTACGC +
Preference number: 5 (lower is better)
Translates to: PSLRPQTLSSLGLALEHWAIILC*ECTRLR
Trigger: GCGTAATCTGGTGCACTCCAAGCACAAGATGATCGC...CCAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CACGTGTTTGGCATCCCCAAGTCCAAAAGCTCAGAAGAGACCACCAGGTTCCCCGCTCTGCACCCGCCCTaGAGGCACCCTCAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: HVFGIPKSKSSEETTRFPALHPP*RHPQAV
Trigger: CACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAGC...GGGGAACCTGGTGGTCTCTTCTGAGCTTTTGGACTTGGGGATGCCAAACACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATAGCTTCTCGGGAACCTaGCTCAGGTGGTCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: RRPETYICGRQCRTTFLHSFSGT*LRWSAG
Trigger: GCCGGCAGACCACCTGAGCAAGGTTCCCGAGAAGCT...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGGCGCAGCCATTTCCCTACCCTTaGGCAATTAGGGGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: RPGGWLRHFPTLWQLGAQPFPYP*AIRGAA
Trigger: CGCTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGG...CTGCGCCCCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp TCACCAGCGACCTGGTGGCTGGCTTCGCCATTTCCCTACCCTTTGGCAATTAGGGCCATGTTGCGCACCTaGCTGCTGGGCAAGGCGTCA +
Preference number: 5 (lower is better)
Translates to: SPATWWLASPFPYPLAIRAMLRT*LLGKAS
Trigger: TGACGCCTTGCCCAGCAGCAAGGTGCGCAACATGGC...CCTAATTGCCAAAGGGTAGGGAAATGGCGAAGCCAGCCACCAGGTCGCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTGCAGACGAGGACCCCTaGTCACCCTGGTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIADEDP*SPWCRE
Trigger: CTCTCTGCACCAGGGTGACAAGGGGTCCTCGTCTGC...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp TCATCAAAGGACAGCTTCATAACAGCACAGGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGGGCTGTGGGCACAGGGACCAGATCA +
Preference number: 5 (lower is better)
Translates to: SSKDSFITAQVAWQI*GSMGIGAVGTGTRS
Trigger: TGATCTGGTCCCTGTGCCCACAGCCCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGTTATGAAGCTGTCCTTTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 90 bp AGGACCTCCTTCATGCCCGACGTCTCTGTCTCCAGCTTGGACAGGTaGCTGGAGTTGTCCCTTAGCTCCTGCCTCAGGTGGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RTSFMPDVSVSSLDR*LELSLSSCLRWLFS
Trigger: TGAGAACAGCCACCTGAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTCCAAGCTGGAGACAGAGACGTCGGGCATGAAGGAGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 90 bp GCCTCTCTAAGATGGGATGATGGGGTGGCCTCTCTCACTCAGCCTTaGGAAGGGAGGCGAGGTAGTTCCTGGAGCACCACACCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: ASLRWDDGVASLTQP*EGRRGSSWSTTPFS
Trigger: GCTGAAAGGTGTGGTGCTCCAGGAACTACCTCGCCTCCCTTCCCAAGGCTGAGTGAGAGAGGCCACCCCATCATCCCATCTTAGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS-3UTR CAA 90 bp CGCCGCCCAGAGACTTACATATGTGGAAGGCAATGCCGCACCACCTTCCTGCATGACAGGTGGCTGGAGTaGTCCCTTAGCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RRPETYICGRQCRTTFLHDRWLE*SLSSCL
Trigger: GAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTC...ATGCAGGAAGGTGGTGCGGCATTGCCTTCCACATATGTAAGTCTCTGGGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAAGGACGCGCATCTCCTaGCGCGCCAGGCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: NNPCKALISELPAAAVITRTRIS*RARPWS
Trigger: GGACCAGGGCCTGGCGCGCAAGGAGATGCGCGTCCT...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTCACAGGGTGGCCTTGTaGGCAACGTCCCCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIHRVAL*ATSPKV
Trigger: CACCTTTGGGGACGTTGCCAACAAGGCCACCCTGTG...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTAGCGCGGAGGCCACCTaGCGCAGCCGGGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSAEAT*RSRAGT
Trigger: CGTGCCTGCCCGGCTGCGCAAGGTGGCCTCCGCGCT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAGCTCCGCCGGAGCGCTaGGGCTCCGGGTTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: NNPCKALISELPAAAVITAPPER*GSGFPE
Trigger: TTCAGGGAACCCGGAGCCCAAGCGCTCCGGCGGAGC...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGAGGGTGAGCACGTGTTaGGCATCCCCAAGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: TLPASSDPQLLRTGPGALRVSTC*ASPSPK
Trigger: TTTTGGACTTGGGGATGCCAAACACGTGCTCACCCT...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ACCCTCCCTGCGTCCTCAGACCCTCAGCTCCTTAGGACTGGCCCTGGAGCATTGGTATTCACCCGTCATTaGTTCTCTGACCCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TLPASSDPQLLRTGPGALVFTRH*FSDPQV
Trigger: CACCTGGGGGTCAGAGAACAAATGACGGGTGAATAC...CAATGCTCCAGGGCCAGTCCTAAGGAGCTGAGGGTCTGAGGACGCAGGGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 90 bp TCAGGGGACGCAGTGTGTGGCTTGCCATGTCATCCGGCTCCTTCTTaGTCTGTCCTGAGTCTCAGGGACCACCATTTGGCTGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SGDAVCGLPCHPAPS*SVLSLRDHHLAVPR
Trigger: TCTGGGAACAGCCAAATGGTGGTCCCTGAGACTCAGGACAGACCAAGAAGGAGCCGGATGACATGGCAAGCCACACACTGCGTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAGCACCTTCTTGCTGTaGATGTCGGCCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: ASRTADGVVLTPDRWLYISTFLL*MSALQD
Trigger: GTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGCT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AACAATCCCTGCAAAGCCCTCATTAGCGAATTACCGGCGGCTGCAGTGATTACAAGCCCTGCTCTGTTCTaGCCCGCGCCCCGAGACTGC +
Preference number: 5 (lower is better)
Translates to: NNPCKALISELPAAAVITSPALF*PAPRDC
Trigger: GCAGTCTCGGGGCGCGGGCAAGAACAGAGCAGGGCT...TGTAATCACTGCAGCCGCCGGTAATTCGCTAATGAGGGCTTTGCAGGGATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GCGAGTCGGACAGCTGACGGTGTCGTCCTTACGCCGGACAGATGGCTTTACATTAAGCCCGGCGACTCCTaGATGAAGGTTAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: ASRTADGVVLTPDRWLYIKPGDS*MKVSCR
Trigger: GCGACAGCTAACCTTCATCAAGGAGTCGCCGGGCTT...AATGTAAAGCCATCTGTCCGGCGTAAGGACGACACCGTCAGCTGTCCGACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 90 bp CAGTGTGTGGCTTGCCATGTCATCCGGCTCCTTCTTGGTCTGTCCTaGGTCTCAGGGACCACCATTTGGCTGTTCCCAGAGGGAGAAACG +
Preference number: 5 (lower is better)
Translates to: QCVACHVIRLLLGLS*VSGTTIWLFPEGET
Trigger: CGTTTCTCCCTCTGGGAACAGCCAAATGGTGGTCCCTGAGACTCAGGACAGACCAAGAAGGAGCCGGATGACATGGCAAGCCACACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS-3UTR CAA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGTCCAGCGCCCGCTGCTaGCGCACGTACAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRSSARC*RTYRLG
Trigger: GCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGA...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp AAGCTTTCACCTCATCTGGCACCAAATACTCTCCAGCCCTGCGTTCACCTGCCGAAGCCCGGCGACTCCTaGATGAAGGTTAGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: KLSPHLAPNTLQPCVHLPKPGDS*MKVSCR
Trigger: GCGACAGCTAACCTTCATCAAGGAGTCGCCGGGCTT...CGGCAGGTGAACGCAGGGCTGGAGAGTATTTGGTGCCAGATGAGGTGAAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp CCCACGATCCATCCATGCATTCAGCGACTTCCCGAGCGTTTACTCTaGGCCAGGTACGATCATGGGCGGGTCTTTTCCCAACGTCAAATG +
Preference number: 5 (lower is better)
Translates to: PTIHPCIQRLPERLL*ARYDHGRVFSQRQM
Trigger: CATTTGACGTTGGGAAAAGACCCGCCCATGATCGTACCTGGCGCAGAGTAAACGCTCGGGAAGTCGCTGAATGCATGGATGGATCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 90 bp CAAATGGCTGCAAAGTTGGGACTTCCTTTCCCAGCCTCTCTAAGATaGGATGATGGGGTGGCCTCTCTCACTCAGCCTTGGGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: QMAAKLGLPFPASLR*DDGVASLTQPWEGR
Trigger: CCTCCCTTCCCAAGGCTGAGTGAGAGAGGCCACCCCATCATCCCATCTTAGAGAGGCTGGGAAAGGAAGTCCCAACTTTGCAGCCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS-3UTR CAA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCATGGGCCAGGACGCCCTaGCCAGCGCTCCACGGTCGG +
Preference number: 5 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAWARTP*PALHGR
Trigger: CCGACCGTGGAGCGCTGGCAAGGGCGTCCTGGCCCA...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAAGGACGCGCATCTCCTaGCGCGCCAGGCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTARTRIS*RARPWS
Trigger: GGACCAGGGCCTGGCGCGCAAGGAGATGCGCGTCCT...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGTGCGCGCCGGCGTTTaGGGCACCGGGGAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTVRAGV*GTGEAP
Trigger: CGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCAC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTTCCCCAAAGGTGAGGTaGGTGAGGGTCATGCCCGCG +
Preference number: 5 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSPKVR*VRVMPA
Trigger: CGCGGGCATGACCCTCACCAACCTCACCTTTGGGGA...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 90 bp TCAAAGTCTGCACCCAACTTTCCAGAGTTACCCACGATCCATCCATaGATTCAGCGACTTCCCGAGCGTTTACTCTGCGCCAGGTACGAT +
Preference number: 5 (lower is better)
Translates to: SKSAPNFPELPTIHP*IQRLPERLLCARYD
Trigger: ATCGTACCTGGCGCAGAGTAAACGCTCGGGAAGTCGCTGAATGCATGGATGGATCGTGGGTAACTCTGGAAAGTTGGGTGCAGACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCAGCGCCCGCTGCTaGCGCACGTACAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTSSARC*RTYRLG
Trigger: GCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGGCTTTGAGCCGTCCTaGTCTGCGGGGGCGCTCGGG +
Preference number: 5 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTGFEPS*SAGALG
Trigger: CCCGAGCGCCCCCGCAGACAAGGACGGCTCAAAGCC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGGGGACGTGCTGGAGTaGGTCTTGGGGGCGGCGACC +
Preference number: 5 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTGDVLE*VLGAAT
Trigger: GGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCCC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTAGCACCTTCTTGCTGTaGATGTCGGCCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSTFLL*MSALQD
Trigger: GTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGCT...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp CCTTACGCCGGACAGATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTTCCCTCAGCACCTTCTaGCTGTTGATGTCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PYAGQMALHLGKDRLSLFSLSTF*LLMSAL
Trigger: GAGGGCCGACATCAACAGCAAGAAGGTGCTGAGGGA...AAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCATCTGTCCGGCGTAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCACACAGGGTGGCCTTGTaGGCAACGTCCCCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: GRTGFHYLPLFTRPFNTAHRVAL*ATSPKV
Trigger: CACCTTTGGGGACGTTGCCAACAAGGCCACCCTGTG...TGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp GGCTTTCACTATTTACCACTATTTACACGTCCGTTTAACACTGCAGAGACCCGGCCCATGGCGATCATCTaGTGCTTGGAGTGCACCAGA +
Preference number: 5 (lower is better)
Translates to: GFHYLPLFTRPFNTAETRPMAII*CLECTR
Trigger: TCTGGTGCACTCCAAGCACAAGATGATCGCCATGGG...CCGGGTCTCTGCAGTGTTAAACGGACGTGTAAATAGTGGTAAATAGTGAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGGTGGGAGGGAGGCCTaGCAGTGGGCGTACCTTGAG +
Preference number: 5 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTGGREA*QWAYLE
Trigger: CTCAAGGTACGCCCACTGCAAGGCCTCCCTCCCACC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGTTCAGGGTGGACTCCTaGGTGGCCCGCAGGACACAC +
Preference number: 5 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTFRVDS*VARRTH
Trigger: GTGTGTCCTGCGGGCCACCAAGGAGTCCACCCTGAA...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS-3UTR CAA 90 bp ATGGCTTTACATTTAGGGAAGGACAGGCTTTCACTATTTACCACTATTTACACGGCGATCATCTTGTGCTaGGAGTGCACCAGATTACGC +
Preference number: 5 (lower is better)
Translates to: MALHLGKDRLSLFTTIYTAIILC*ECTRLR
Trigger: GCGTAATCTGGTGCACTCCAAGCACAAGATGATCGC...CGTGTAAATAGTGGTAAATAGTGAAAGCCTGTCCTTCCCTAAATGTAAAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp CGCGGGCTGGGCGAGCTGTCGCGTCCGCCTCCTGGGCCCGGGTCCTaGGTGACCGCGGGCTCCCGGCCTCGTGGATGGACGGCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RGLGELSRPPPGPGS*VTAGSRPRGWTAGG
Trigger: GCCGCCGGCCGTCCATCCACGAGGCCGGGAGCCCGCGGTCACCAAGGACCCGGGCCCAGGAGGCGGACGCGACAGCTCGCCCAGCCCGCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp GGCACGCAGCTGCCTGGGGACACGGCGGTGGCGGCCGCCTGGTGCTaGGCGGGCCGATGGGCCAGCAGGTTGCGCAGGGCGGCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: GTQLPGDTAVAAAWC*AGRWASRLRRAAAL
Trigger: CAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp GGCACGGGGAGTGCGCGGCGACCTGGCACCAGCGCGGAGGCCACCTaGCGCAGCCGGGCAGGCACGGCGGCTCCCAGGCACTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: GTGSARRPGTSAEAT*RSRAGTAAPRHSRS
Trigger: GCTGCGGGAGTGCCTGGGAGCCGCCGTGCCTGCCCGGCTGCGCAAGGTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTCCCCGTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp TCCGCGCTGCGGCCGGCGCCTCCCGCCTTGTGCCGGTaGCCCATGGCCTGTCTGGCAGAGGTGGGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: SALRPAPPALCR*PMACLAEVGRP
Trigger: CGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCGCCGGCCGCAGCGCGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GGCCGGCGCCTGGGCAGGGCCGAGCTGATGCACCGCTaGAGAAGCTCCTCCGCGGCCCGCGGGCTGGGCGAG +
Preference number: 6 (lower is better)
Translates to: GRRLGRAELMHR*RSSSAARGLGE
Trigger: CTCGCCCAGCCCGCGGGCCGCGGAGGAGCTTCTGCAGCGGTGCATCAGCTCGGCCCTGCCCAGGCGCCGGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp TCGGCGGAGGTGGCCTCGCGGGCCGGGGGCTCGGCCTaGCAGCCGGGCAGGTCAAGGTCAAGCCGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SAEVASRAGGSA*QPGRSRSSRLG
Trigger: GCCCAGCCGGCTTGACCTTGACCTGCCCGGCTGCCAGGCCGAGCCCCCGGCCCGCGAGGCCACCTCCGCCGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CCCGGGACCCCTCTGCGGGCCGCTCATCCAGCCGGGTaGCTCGGGGCTTGCGGCGCCGCAGGCCAGACACGG +
Preference number: 6 (lower is better)
Translates to: PGTPLRAAHPAG*LGACGAAGQTR
Trigger: CCGTGTCTGGCCTGCGGCGCCGCAAGCCCCGAGCCACCCGGCTGGATGAGCGGCCCGCAGAGGGGTCCCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CAGGGGCTCCGGGGCGGACAAAGCCCGGTCCGGGCCTaGGCAGGCGGCGCTGCCGCTCCTAGCGCTGGGCGA +
Preference number: 6 (lower is better)
Translates to: QGLRGGQSPVRA*AGGAAAPSAGR
Trigger: TCGCCCAGCGCTAGGAGCGGCAGCGCCGCCTGCCCAGGCCCGGACCGGGCTTTGTCCGCCCCGGAGCCCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590469.6
CDS GCA 72 bp TGGGAGCCTTGGCGAGGCTGGGACCGTCCACGTCGCTaGCGAGGAGGGAGAGCTGGCCGCCGGCGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: WEPWRGWDRPRR*RGGRAGRRRGP
Trigger: GGGCCCCCGCCGGCGGCCAGCTCTCCCTCCTCGGCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp TGCACCGCTGCAGAAGCTCCTCCGCGGCCCGCGGGCTaGGCGAGCTGTCGCGTCCGCCTCCTGGGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: CTAAEAPPRPAG*ASCRVRLLGPG
Trigger: ACCCGGGCCCAGGAGGCGGACGCGACAGCTCGCCCAGCCCGCGGGCCGCGGAGGAGCTTCTGCAGCGGTGCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CCGCGACCGCTGCTGCCCGGGGCTCGGGACTTTGGCTaGAGCCGCGGGCTGTGCCAGGCAAGGGGGCGCCAC +
Preference number: 6 (lower is better)
Translates to: PRPLLPGARDFG*SRGLCQARGRH
Trigger: GTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GGCTCCGCGACCGCTGCTGCCCGGGGCTCGGGACTTTaGCTGGAGCCGCGGGCTGTGCCAGGCAAGGGGGCG +
Preference number: 6 (lower is better)
Translates to: GSATAAARGSGL*LEPRAVPGKGA
Trigger: CGCCCCCTTGCCTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp AGTGCGCGGCGACCTGGCACCAGCGCGGAGGCCACCTaGCGCAGCCGGGCAGGCACGGCGGCTCCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: SARRPGTSAEAT*RSRAGTAAPRH
Trigger: GTGCCTGGGAGCCGCCGTGCCTGCCCGGCTGCGCAAGGTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp GGCCGGTGTAGGCTCCGCGACCGCTGCTGCCCGGGGCTCGGGACTTaGGCTGGAGCCGCGGGCTGTGCCAGGCAAGGGGGCGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: GRCRLRDRCCPGLGT*AGAAGCARQGGATF
Trigger: GAAGGTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCTACACCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp AGCTGTCCTTGGAGGGCCCGGAGCCGTGTACTGGGCTaGCCTCGGGGGTCCGGGCGGCAGGCTCCGGGCCCA +
Preference number: 6 (lower is better)
Translates to: SCPWRARSRVLG*PRGSGRQAPGP
Trigger: TGGGCCCGGAGCCTGCCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGGCCCTCCAAGGACAGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS GCA 72 bp CAGCTGCCTGGGGACACGGCGGTGGCGGCCGCCTGGTaGTTGGCGGGCCGATGGGCCAGCAGGTTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: QLPGDTAVAAAW*LAGRWASRLRR
Trigger: CCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GGCCGCCACGGCTGCCTCCCCACTGGTGTCCTTCTCTaGCTCCTTGCCGCCTCGGCGGGTGGGCGGGGTGCG +
Preference number: 6 (lower is better)
Translates to: GRHGCLPTGVLL*LLAASAGGRGA
Trigger: CGCACCCCGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCGTGGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CACGCTATCCAGGTCGGAGGCCCGGTCCGAGCCCGCTaGCTCCTCGCCGCGTTCCCGGGACCCCTCTGCGGG +
Preference number: 6 (lower is better)
Translates to: HAIQVGGPVRAR*LLAAFPGPLCG
Trigger: CCCGCAGAGGGGTCCCGGGAACGCGGCGAGGAGGCAGCGGGCTCGGACCGGGCCTCCGACCTGGATAGCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CCCGGGGCTCGGGACTTTGGCTGGAGCCGCGGGCTGTaGCAGGCAAGGGGGCGCCACCTTCCGCGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: PGARDFGWSRGL*QARGRHLPRCG
Trigger: GCCACACCGCGGAAGGTGGCGCCCCCTTGCCTGGCACAGCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp ACGCAGCTGCCTGGGGACACGGCGGTGGCGGCCGCCTaGTGCTTGGCGGGCCGATGGGCCAGCAGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: TQLPGDTAVAAA*CLAGRWASRLR
Trigger: GCGCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GCGGCTCCCAGGCACTCCCGCAGCAGTTCCAGCTCCTaGTCCGCGGCGCCGCGAGGGCGAGAACCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: AAPRHSRSSSSS*SAAPRGREPVG
Trigger: GCCCACGGGTTCTCGCCCTCGCGGCGCCGCGGACCAGGAGCTGGAACTGCTGCGGGAGTGCCTGGGAGCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CGCGTAAAAGCGCGAGGGATGGCCGATGTGCGCCGGTaGGTTGGCGTGGGCGCGGCCGCCGGGGGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: RVKARGMADVRR*VGVGAAAGGSS
Trigger: CGAGGAGCCCCCGGCGGCCGCGCCCACGCCAACCCACCGGCGCACATCGGCCATCCCTCGCGCTTTTACGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp GGGGGACCCTGTGGCGCGGGCGCCAGCGGTGGCGTCTaGCTCCGGCTGGGAGGCATGGTCTGTCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GGPCGAGASGGV*LRLGGMVCPGL
Trigger: CAGCCCCGGACAGACCATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGGCGCCCGCGCCACAGGGTCCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp GGCGAGCTGTCGCGTCCGCCTCCTGGGCCCGGGTCCTaGGTGACCGCGGGCTCCCGGCCTCGTGGATGGACG +
Preference number: 6 (lower is better)
Translates to: GELSRPPPGPGS*VTAGSRPRGWT
Trigger: CGTCCATCCACGAGGCCGGGAGCCCGCGGTCACCAAGGACCCGGGCCCAGGAGGCGGACGCGACAGCTCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CGGCTGCCTCCCCACTGGTGTCCTTCTCTGCCTCCTTaGCGCCTCGGCGGGTGGGCGGGGTGCGAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: RLPPHWCPSLPP*RLGGWAGCEPA
Trigger: CGCTGGCTCGCACCCCGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GGGGACCCTGTGGCGCGGGCGCCAGCGGTGGCGTCTTaGTCCGGCTGGGAGGCATGGTCTGTCCGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: GDPVARAPAVAS*SGWEAWSVRGC
Trigger: ACAGCCCCGGACAGACCATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGGCGCCCGCGCCACAGGGTCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GTCTTGGCAGGCCGGTGTAGGCTCCGCGACCGCTGCTaGCCGGGGCTCGGGACTTTGGCTGGAGCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: VLAGRCRLRDRC*PGLGTLAGAAG
Trigger: GCCCGCGGCTCCAGCCAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCTACACCGGCCTGCCAAGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CGAGCCAGCGGTGGCGGCCCACGCCGGGCCGGCCTCTaGATGAACGGGATCCGCACGGGCGATCTCTGCGTC +
Preference number: 6 (lower is better)
Translates to: RASGGGPRRAGL*MNGIRTGDLCV
Trigger: GACGCAGAGATCGCCCGTGCGGATCCCGTTCATGCAGAGGCCGGCCCGGCGTGGGCCGCCACCGCTGGCTCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CCCAAAGCTGTCCTTGGAGGGCCCGGAGCCGTGTACTaGGCTGCCCTCGGGGGTCCGGGCGGCAGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: PKAVLGGPGAVY*AALGGPGGRLR
Trigger: CCGGAGCCTGCCGCCCGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 72 bp GCGGCATGGCGAGCAGGACTGGGCGCGGCCCTCCCGTaGCGCCTCCTGTCCCGGGTCTCCAGAGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: AAWRAGLGAALP*RLLSRVSRAEA
Trigger: AGCCTCAGCTCTGGAGACCCGGGACAGGAGGCGCCACGGGAGGGCCGCGCCCAGTCCTGCTCGCCATGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GTGGCGCGGGCGCCAGCGGTGGCGTCTTGCTCCGGCTaGGAGGCATGGTCTGTCCGGGGCTGTCGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: VARAPAVASCSG*EAWSVRGCRAA
Trigger: AGCTGCCCGACAGCCCCGGACAGACCATGCCTCCCAGCCGGAGCAAGACGCCACCGCTGGCGCCCGCGCCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp ACGGCCTCCTCAGTGGGCGTCGTGAGGCACAGCGACTaGAGCGCCCCGTCCCCGCGGGTCCGGCCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: TASSVGVVRHSD*SAPSPRVRPGF
Trigger: AAAGCCCGGCCGGACCCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGGAGGCCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GCCGGAAGCCCGAGCGGTCGGAGGACTCGCTGCCGCTaGAGAGGGCTGAGGCCACACGCACCAGGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: AGSPSGRRTRCR*RGLRPHAPGPG
Trigger: GCCTGGGCCTGGTGCGTGTGGCCTCAGCCCTCTCCAGCGGCAGCGAGTCCTCCGACCGCTCGGGCTTCCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CGTCCTCGGGCGTGGAGCCCCGCAGTGGCAGGGCCGTaGCGGGAAGCGTGCTGCGCAGGATGTGGGGCACGT +
Preference number: 6 (lower is better)
Translates to: RPRAWSPAVAGP*REACCAGCGAR
Trigger: ACGTGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGGCCCTGCCACTGCGGGGCTCCACGCCCGAGGACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp TGCGCGAGGTGCCGTGCGTCCAGCTCGGCCTCCAGCGCCCGCTGCTaGCGCACGTACAGGCTGGGCACGCAGCTGCCTGGGGACACGGCG +
Preference number: 6 (lower is better)
Translates to: CARCRASSSASSARC*RTYRLGTQLPGDTA
Trigger: CGCCGTGTCCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGCCGAGCTGGACGCACGGCACCTCGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CCGCCTGGTGCTTGGCGGGCCGATGGGCCAGCAGGTTaGGCAGGGCGGCGGCGCTGCCCATGGCGATCATCT +
Preference number: 6 (lower is better)
Translates to: PPGAWRADGPAG*AGRRRCPWRSS
Trigger: AGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCATCGGCCCGCCAAGCACCAGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp CCGGGCAGGTCAAGGTCAAGCCGGCTGGGCCGAGGCTaGCCACACCTGGGGTCCTCGCGGCGCGAAGCCAGT +
Preference number: 6 (lower is better)
Translates to: PGRSRSSRLGRG*PHLGSSRREAS
Trigger: ACTGGCTTCGCGCCGCGAGGACCCCAGGTGTGGGCAGCCTCGGCCCAGCCGGCTTGACCTTGACCTGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CGGGGCGGGCACCAACATGTAGACGGGCACGGGGAGTaGGCGGCGACCTGGCACCAGCGCGGAGGCCACCTT +
Preference number: 6 (lower is better)
Translates to: RGGHQHVDGHGE*AATWHQRGGHL
Trigger: AAGGTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTCCCCGTGCCCGTCTACATGTTGGTGCCCGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GAGGTCTTGGCAGGCCGGTGTAGGCTCCGCGACCGCTaGTGCCCGGGGCTCGGGACTTTGGCTGGAGCCGCG +
Preference number: 6 (lower is better)
Translates to: EVLAGRCRLRDR*CPGLGTLAGAA
Trigger: CGCGGCTCCAGCCAAAGTCCCGAGCCCCGGGCAGCAGCGGTCGCGGAGCCTACACCGGCCTGCCAAGACCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp TGCTGCGCAGGATGTGGGGCACGTCCTCATCTCGGATaGGCCGCCAGGTCGTGCCCGGCGCGGCCACCCTGG +
Preference number: 6 (lower is better)
Translates to: CCAGCGARPHLG*AARSCPARPPW
Trigger: CCAGGGTGGCCGCGCCGGGCACGACCTGGCGGCGCATCCGAGATGAGGACGTGCCCCACATCCTGCGCAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CTGCTTGCGCACGTACAGGCTGGGCACGCAGCTGCCTaGGGACACGGCGGTGGCGGCCGCCTGGTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: LLAHVQAGHAAA*GHGGGGRLVLG
Trigger: GCCAAGCACCAGGCGGCCGCCACCGCCGTGTCCCCAGGCAGCTGCGTGCCCAGCCTGTACGTGCGCAAGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp TGGTGTCCTTCTCTGCCTCCTTGCCGCCTCGGCGGGTaGGCGGGGTGCGAGCCAGCGCCTGCCCCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: WCPSLPPCRLGG*AGCEPAPAPAG
Trigger: TCCTGCAGGGGCAGGCGCTGGCTCGCACCCCGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CAACATGTAGACGGGCACGGGGAGTGCGCGGCGACCTaGCACCAGCGCGGAGGCCACCTTGCGCAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: QHVDGHGECAAT*HQRGGHLAQPG
Trigger: GCCCGGCTGCGCAAGGTGGCCTCCGCGCTGGTGCCAGGTCGCCGCGCACTCCCCGTGCCCGTCTACATGTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CGCCTCCCGCCTTGTGCCGGTGCCCCATGGCCTGTCTaGCAGAGGTGGGGCGGCCGGTGGGTCTTTGCCTGC +
Preference number: 6 (lower is better)
Translates to: RLPPCAGAPWPV*QRWGGRWVFAC
Trigger: GCAGGCAAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGCACCGGCACAAGGCGGGAGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CTGGAGTTGGTCTTGGGGGCGGCGACCTCCTCGGTCTaGACCACGGCGTCGCTGGTCTTGCGCGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: LELVLGAATSSV*TTASLVLRGGG
Trigger: GCCCCCGCCGCGCAAGACCAGCGACGCCGTGGTCCAGACCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp GCGACCCCCGGCCGCGGCCTCGGTGCCGTGGAGGATTaGCAGCAGCAGAGGCAGACAGCCCGAGCGGCGCAT +
Preference number: 6 (lower is better)
Translates to: ATPGRGLGAVED*QQQRQTARAAH
Trigger: ATGCGCCGCTCGGGCTGTCTGCCTCTGCTGCTGCAAATCCTCCACGGCACCGAGGCCGCGGCCGGGGGTCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 72 bp ACGGCTGCCTCCCCACTGGTGTCCTTCTCTGCCTCCTaGCCGCCTCGGCGGGTGGGCGGGGTGCGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: TAASPLVSFSAS*PPRRVGGVRAS
Trigger: GCTGGCTCGCACCCCGCCCACCCGCCGAGGCGGCAAGGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp AGGCCCTGGTCCGGCTGCGAGAAGACGATGTTGTGCAGCGCCGCGTaGGCGCGCATGCGTGCGTCCTTGGCGCCCGGTGCCCCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: RPWSGCEKTMLCSAA*ARMRASLAPGAPGA
Trigger: GGCCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 90 bp TCCAGCAGCCGGATGGTGGCCCGGCTCAGCTCCCCAAAGCTGTCCTaGGAGGGCCCGGAGCCGTGTACTGGGCTGCCCTCGGGGGTCCGG +
Preference number: 6 (lower is better)
Translates to: SSSRMVARLSSPKLS*EGPEPCTGLPSGVR
Trigger: CCGGACCCCCGAGGGCAGCCCAGTACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGAGCTGAGCCGGGCCACCATCCGGCTGCTGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CAA 90 bp GCGACCCCCAGGCCCTCGTGCACGAAGGGTGCGGAGATGGGAGCCTaGGCGAGGCTGGGACCGTCCACGTCGCTGCCGAGGAGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: ATPRPSCTKGAEMGA*ARLGPSTSLPRRES
Trigger: GCTCTCCCTCCTCGGCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAGGGCCTGGGGGTCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp AGAAGACGATGTTGTGCAGCGCCGCGTTGGCGCGCATaGGTGCGTCCTTGGCGCCCGGTGCCCCTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: RRRCCAAPRWRA*VRPWRPVPLGP
Trigger: GGGCCCCAGGGGCACCGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp AGGTGCCGTGCGTCCAGCTCGGCCTCCAGCGCCCGCTaGTTGCGCACGTACAGGCTGGGCACGCAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: RCRASSSASSAR*LRTYRLGTQLP
Trigger: AGGCAGCTGCGTGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGCCGAGCTGGACGCACGGCACCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CCGGCTGCGAGAAGACGATGTTGTGCAGCGCCGCGTTaGCGCGCATGCGTGCGTCCTTGGCGCCCGGTGCCC +
Preference number: 6 (lower is better)
Translates to: PAARRRCCAAPR*RACVRPWRPVP
Trigger: GGGCACCGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp AGCATGCCCACGGCGCCCAGGTCCCACAGCAGCTCCTaGTCACGGGCGCTGCGGGCCGACAGGTTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: SMPTAPRSHSSS*SRALRADRFQS
Trigger: GCTCTGGAACCTGTCGGCCCGCAGCGCCCGTGACCAGGAGCTGCTGTGGGACCTGGGCGCCGTGGGCATGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp GGGGCAGCCGCCAGCTTCTCGGGAACCTTGCTCAGGTaGTCTGCCGGCAGCCAGGCCTGCTTCCGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: GAAASFSGTLLR*SAGSQACFRAP
Trigger: AGGGGCCCGGAAGCAGGCCTGGCTGCCGGCAGACCACCTGAGCAAGGTTCCCGAGAAGCTGGCGGCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CCTTGTGCCGGTGCCCCATGGCCTGTCTGGCAGAGGTaGGGCGGCCGGTGGGTCTTTGCCTGCCCGCTGGTC +
Preference number: 6 (lower is better)
Translates to: PCAGAPWPVWQR*GGRWVFACPLV
Trigger: GACCAGCGGGCAGGCAAAGACCCACCGGCCGCCCCACCTCTGCCAGACAGGCCATGGGGCACCGGCACAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GGCAGGGCCGTGGCGGGAAGCGTGCTGCGCAGGATGTaGGGCACGTCCTCATCTCGGATGCGCCGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: GRAVAGSVLRRM*GTSSSRMRRQV
Trigger: GACCTGGCGGCGCATCCGAGATGAGGACGTGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGGCCCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CGACCCCCAGGCCCTCGTGCACGAAGGGTGCGGAGATaGGAGCCTTGGCGAGGCTGGGACCGTCCACGTCGC +
Preference number: 6 (lower is better)
Translates to: RPPGPRARRVRR*EPWRGWDRPRR
Trigger: GCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAGGGCCTGGGGGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp CGTGGGCAGTACCCGTCGCTGGCACTGCCGCTGTTGAGGCTGTCGTaGGAGAGGCTGGCGTGGGCCGCCTTGAGCCGCAGCAGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: RGQYPSLALPLLRLS*ERLAWAALSRSSGC
Trigger: GCACCCGCTGCTGCGGCTCAAGGCGGCCCACGCCAGCCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCAGCGACGGGTACTGCCCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp GCCGAGGACAGCTCGGAGCGGCGGCGCCGCAAGCCCGGCGACTCCTaGATGAAGGTTAGCTGTCGCCGGAAGCCCGAGCGGTCGGAGGAC +
Preference number: 6 (lower is better)
Translates to: AEDSSERRRRKPGDS*MKVSCRRKPERSED
Trigger: GTCCTCCGACCGCTCGGGCTTCCGGCGACAGCTAACCTTCATCAAGGAGTCGCCGGGCTTGCGGCGCCGCCGCTCCGAGCTGTCCTCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 72 bp CGCGTGGGCAGTACCCGTCGCTGGCACTGCCGCTGTTaGGGCTGTCGTTGGAGAGGCTGGCGTGGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: RVGSTRRWHCRC*GCRWRGWRGPP
Trigger: AGGCGGCCCACGCCAGCCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCAGCGACGGGTACTGCCCACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 72 bp CGTAGAAGCAGTACACGGCCTCCTCAGTGGGCGTCGTaGGGCACAGCGACTGGAGCGCCCCGTCCCCGCGGG +
Preference number: 6 (lower is better)
Translates to: RRSSTRPPQWAS*GTATGAPRPRG
Trigger: CCCGCGGGGACGGGGCGCTCCAGTCGCTGTGCCTCACGACGCCCACTGAGGAGGCCGTGTACTGCTTCTACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CACTGTCGGAGGCCAGCTGGGCCACGATGGCCTCCATaGAGCCGCGGCGCGCACACAGGGTGGCCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: HCRRPAGPRWPP*SRGAHTGWPCW
Trigger: CCAACAAGGCCACCCTGTGTGCGCGCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp GGTCACGGGCGCTGCGGGCCGACAGGTTCCAGAGCGTaGCGCACGCGTTGCTCACGATGGTCAGGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: GHGRCGPTGSRA*RTRCSRWSGCA
Trigger: CGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCGCCCGTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp GGAACCTTGCTCAGGTGGTCTGCCGGCAGCCAGGCCTaGTTCCGGGCCCCTGGAGAGATTCCAGGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: GTLLRWSAGSQA*FRAPGEIPGPA
Trigger: CGCGGGGCCTGGAATCTCTCCAGGGGCCCGGAAGCAGGCCTGGCTGCCGGCAGACCACCTGAGCAAGGTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp TGGAGCCCCGCAGTGGCAGGGCCGTGGCGGGAAGCGTaGTGCGCAGGATGTGGGGCACGTCCTCATCTCGGA +
Preference number: 6 (lower is better)
Translates to: WSPAVAGPWREA*CAGCGARPHLG
Trigger: TCCGAGATGAGGACGTGCCCCACATCCTGCGCAGCACGCTTCCCGCCACGGCCCTGCCACTGCGGGGCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GGATGGTGGCCCGGCTCAGCTCCCCAAAGCTGTCCTTaGAGGGCCCGGAGCCGTGTACTGGGCTGCCCTCGG +
Preference number: 6 (lower is better)
Translates to: GWWPGSAPQSCP*RARSRVLGCPR
Trigger: CCGAGGGCAGCCCAGTACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGAGCTGAGCCGGGCCACCATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 72 bp GGCGCATGGCCACGCAGCTCTCGGGCGAGCTGGACATaGCCAGCAGCGTGCGCGCTGTATCCTCCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: GAWPRSSRASWT*PAACALYPPGR
Trigger: GCGACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCTGCGTGGCCATGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp ACCACCTGGTGGAGCTCCTCACTGTCGGAGGCCAGCTaGGCCACGATGGCCTCCATGCAGCCGCGGCGCGCA +
Preference number: 6 (lower is better)
Translates to: TTWWSSSLSEAS*ATMASMQPRRA
Trigger: TGCGCGCCGCGGCTGCATGGAGGCCATCGTGGCCCAGCTGGCCTCCGACAGTGAGGAGCTCCACCAGGTGGT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp GGTCGATGCGCGCCACTGCAAGCGCCAGCTTGGCCTTaGCCTTGGCCGCCACGGCTGCCTCCCCACTGGTGT +
Preference number: 6 (lower is better)
Translates to: GRCAPLQAPAWP*PWPPRLPPHWC
Trigger: ACACCAGTGGGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GGCCCTCGTGCACGAAGGGTGCGGAGATGGGAGCCTTaGCGAGGCTGGGACCGTCCACGTCGCTGCCGAGGA +
Preference number: 6 (lower is better)
Translates to: GPRARRVRRWEP*RGWDRPRRCRG
Trigger: TCCTCGGCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CCGAGGTCTGGCACCCAGATGCTGCCCCAGAGGGGCTaGGAAGTCCAGGCTGGAGGCCCGACAAGACCCGCC +
Preference number: 6 (lower is better)
Translates to: PRSGTQMLPQRG*EVQAGGPTRPA
Trigger: GGCGGGTCTTGTCGGGCCTCCAGCCTGGACTTCCCAGCCCCTCTGGGGCAGCATCTGGGTGCCAGACCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CAA 72 bp CGGATGGTGGCCCGGCTCAGCTCCCCAAAGCTGTCCTaGGAGGGCCCGGAGCCGTGTACTGGGCTGCCCTCG +
Preference number: 6 (lower is better)
Translates to: RMVARLSSPKLS*EGPEPCTGLPS
Trigger: CGAGGGCAGCCCAGTACACGGCTCCGGGCCCTCCAAGGACAGCTTTGGGGAGCTGAGCCGGGCCACCATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CAA 72 bp TCCGGCTGCGAGAAGACGATGTTGTGCAGCGCCGCGTaGGCGCGCATGCGTGCGTCCTTGGCGCCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: SGCEKTMLCSAA*ARMRASLAPGA
Trigger: GGCACCGGGCGCCAAGGACGCACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 72 bp AGCTCGGAGCGGCGGCGCCGCAAGCCCGGCGACTCCTaGATGAAGGTTAGCTGTCGCCGGAAGCCCGAGCGG +
Preference number: 6 (lower is better)
Translates to: SSERRRRKPGDS*MKVSCRRKPER
Trigger: CCGCTCGGGCTTCCGGCGACAGCTAACCTTCATCAAGGAGTCGCCGGGCTTGCGGCGCCGCCGCTCCGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp CTGGTCTCCAGGCTCGGGGACGTGCTGGAGTTGGTCTaGGGGGCGGCGACCTCCTCGGTCTGGACCACGGCG +
Preference number: 6 (lower is better)
Translates to: LVSRLGDVLELV*GAATSSVWTTA
Trigger: CGCCGTGGTCCAGACCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCCCGAGCCTGGAGACCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp GGCTCCCTGGTCTCCAGGCTCGGGGACGTGCTGGAGTaGGTCTTGGGGGCGGCGACCTCCTCGGTCTGGACC +
Preference number: 6 (lower is better)
Translates to: GSLVSRLGDVLE*VLGAATSSVWT
Trigger: GGTCCAGACCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCCCGAGCCTGGAGACCAGGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp AGGCCCTCGTGCACGAAGGGTGCGGAGATGGGAGCCTaGGCGAGGCTGGGACCGTCCACGTCGCTGCCGAGG +
Preference number: 6 (lower is better)
Translates to: RPSCTKGAEMGA*ARLGPSTSLPR
Trigger: CCTCGGCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCGTGCACGAGGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp ATCTCCTTGCGCGCCAGGCCCTGGTCCGGCTGCGAGAAGACGATGTaGTGCAGCGCCGCGTTGGCGCGCATGCGTGCGTCCTTGGCGCCC +
Preference number: 6 (lower is better)
Translates to: ISLRARPWSGCEKTM*CSAALARMRASLAP
Trigger: GGGCGCCAAGGACGCACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAAGGAGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 90 bp AGCTGGTCGATGCGCGCCACTGCAAGCGCCAGCTTGGCCTTGGCCTaGGCCGCCACGGCTGCCTCCCCACTGGTGTCCTTCTCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SWSMRATASASLALA*AATAASPLVSFSAS
Trigger: GGAGGCAGAGAAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp ATGTCCTCCACCAGCTGGTCGATGCGCGCCACTGCAAGCGCCAGCTaGGCCTTGGCCTTGGCCGCCACGGCTGCCTCCCCACTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: MSSTSWSMRATASAS*ALALAATAASPLVS
Trigger: GGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp GGTCCCTGCAGCGTCTCGTCGCTGAGCGAGGCGGCGCTAGAGAAGTaGACCGGCGTGCCCTCCGCGGAGTCAGTGCAGGAGTCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: GPCSVSSLSEAALEK*TGVPSAESVQESSS
Trigger: GGAGGACGACTCCTGCACTGACTCCGCGGAGGGCACGCCGGTCAACTTCTCTAGCGCCGCCTCGCTCAGCGACGAGACGCTGCAGGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 72 bp ATCACCGCAGCAGCCCCACGACCCTCCATCGGTGGCTaGGCTCAGGGTGGCTACCTGTGTGGCCCGCACCCC +
Preference number: 6 (lower is better)
Translates to: ITAAAPRPSIGG*AQGGYLCGPHP
Trigger: GGGGTGCGGGCCACACAGGTAGCCACCCTGAGCTCAGCCACCGATGGAGGGTCGTGGGGCTGCTGCGGTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 72 bp CGCAGCTCTCGGGCGAGCTGGACATGGCCAGCAGCGTaGGCGCTGTATCCTCCTGGTCGCGCGTCGCCAACA +
Preference number: 6 (lower is better)
Translates to: RSSRASWTWPAA*ALYPPGRASPT
Trigger: TGTTGGCGACGCGCGACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGTCCAGCTCGCCCGAGAGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp GCCAGGCCCTGGTCCGGCTGCGAGAAGACGATGTTGTaGAGCGCCGCGTTGGCGCGCATGCGTGCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: ARPWSGCEKTML*SAALARMRASL
Trigger: CAAGGACGCACGCATGCGCGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp ACGCGCATCTCCTTGCGCGCCAGGCCCTGGTCCGGCTaGGAGAAGACGATGTTGTGCAGCGCCGCGTTGGCG +
Preference number: 6 (lower is better)
Translates to: TRISLRARPWSG*EKTMLCSAALA
Trigger: CGCCAACGCGGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAAGGAGATGCGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp TCGGGCAGCTCGCTAGGGCTGATGGTGCCGCTGCCCTaGCCGCTGCAAGGTTCACTGGGGATGGAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: SGSSLGLMVPLP*PLQGSLGMELA
Trigger: CGCCAGCTCCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCGGCACCATCAGCCCTAGCGAGCTGCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GCGATCTCTGCGTCTTGTGCTGCTTCGCCAGAAGGGTaGGCGCCGGCGTTTTGGGCACCGGGGAGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: AISASCAASPEG*APAFWAPGRLR
Trigger: CCGGAGCCTCCCCGGTGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CAAGCGGTGTCTCCTGCACGTAGTTCTCCGACGAGCTaGACGGCGTGGCGTCTTCCACCCCCAGGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: QAVSPARSSPTS*TAWRLPPPGPG
Trigger: GCCGGGGCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGTCGGAGAACTACGTGCAGGAGACACCGCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CACGGTAAAGCGCACGCTGCCTGCGTCCAGCTCAGATaGCAGCCGGCAGCGCTCCCGGCAGTCGGCGATGTC +
Preference number: 6 (lower is better)
Translates to: HGKAHAACVQLR*QPAALPAVGDV
Trigger: GACATCGCCGACTGCCGGGAGCGCTGCCGGCTGCCATCTGAGCTGGACGCAGGCAGCGTGCGCTTTACCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp TGGTCTCCAGGCTCGGGGACGTGCTGGAGTTGGTCTTaGGGGCGGCGACCTCCTCGGTCTGGACCACGGCGT +
Preference number: 6 (lower is better)
Translates to: WSPGSGTCWSWS*GRRPPRSGPRR
Trigger: ACGCCGTGGTCCAGACCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCCCGAGCCTGGAGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GCTCCCTGGTCTCCAGGCTCGGGGACGTGCTGGAGTTaGTCTTGGGGGCGGCGACCTCCTCGGTCTGGACCA +
Preference number: 6 (lower is better)
Translates to: APWSPGSGTCWS*SWGRRPPRSGP
Trigger: TGGTCCAGACCGAGGAGGTCGCCGCCCCCAAGACCAACTCCAGCACGTCCCCGAGCCTGGAGACCAGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GCACGAAGGGTGCGGAGATGGGAGCCTTGGCGAGGCTaGGACCGTCCACGTCGCTGCCGAGGAGGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: ARRVRRWEPWRG*DRPRRCRGGRA
Trigger: AGCTCTCCCTCCTCGGCAGCGACGTGGACGGTCCCAGCCTCGCCAAGGCTCCCATCTCCGCACCCTTCGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CGCCATCACCGCAGCAGCCCCACGACCCTCCATCGGTaGCTGAGCTCAGGGTGGCTACCTGTGTGGCCCGCA +
Preference number: 6 (lower is better)
Translates to: RHHRSSPTTLHR*LSSGWLPVWPA
Trigger: TGCGGGCCACACAGGTAGCCACCCTGAGCTCAGCCACCGATGGAGGGTCGTGGGGCTGCTGCGGTGATGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CAA 72 bp CGGATCTGCTCCAGCACGTGCAGGACGCGCATCTCCTaGCGCGCCAGGCCCTGGTCCGGCTGCGAGAAGACG +
Preference number: 6 (lower is better)
Translates to: RICSSTCRTRIS*RARPWSGCEKT
Trigger: CGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAAGGAGATGCGCGTCCTGCACGTGCTGGAGCAGATCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 90 bp GCCAGCAGGTTGCGCAGGGCGGCGGCGCTGCCCATGGCGATCATCTaGTGCTTGGAGTGCACCAGATTACGCAGCATGCCCACGGCGCCC +
Preference number: 6 (lower is better)
Translates to: ASRLRRAAALPMAII*CLECTRLRSMPTAP
Trigger: GGGCGCCGTGGGCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCTGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 90 bp TCCACCAGCTGGTCGATGCGCGCCACTGCAAGCGCCAGCTTGGCCTaGGCCTTGGCCGCCACGGCTGCCTCCCCACTGGTGTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: STSWSMRATASASLA*ALAATAASPLVSFS
Trigger: AGAGAAGGACACCAGTGGGGAGGCAGCCGTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp GACAGCGAGAGTGGCCCCTCTTGCGCCGCCAGTTTCTGCAGTGCCTaGCTGGCCACAGACAGCGGGGCAGCCGCCAGCTTCTCGGGAACC +
Preference number: 6 (lower is better)
Translates to: DSESGPSCAASFCSA*LATDSGAAASFSGT
Trigger: GGTTCCCGAGAAGCTGGCGGCTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCGCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp GCCGGCCTCTGCATGAACGGGATCCGCACGGGCGATCTCTGCGTCTaGTGCTGCTTCGCCAGAAGGGTGCGCGCCGGCGTTTTGGGCACC +
Preference number: 6 (lower is better)
Translates to: AGLCMNGIRTGDLCV*CCFARRVRAGVLGT
Trigger: GGTGCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCGGATCCCGTTCATGCAGAGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 72 bp CCTCCCGCGTGGCAGCTGCTGCCTGGTGCAGCCACGTaGCAATTGAATTGGCGCCCTCCTGGATGGCGCGCC +
Preference number: 6 (lower is better)
Translates to: PPAWQLLPGAAT*QLNWRPPGWRA
Trigger: GGCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp ACTCGGTCCTGCGCCTCCAGCAGCTCCTTGTCAATCTaGTCCAGGCGCGAGGCGCGGATCTGTGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: TRSCASSSSLSI*SRREARICARC
Trigger: GCAGCGGGCACAGATCCGCGCCTCGCGCCTGGAGCAGATTGACAAGGAGCTGCTGGAGGCGCAGGACCGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp GGAGATGTCCTCCACCAGCTGGTCGATGCGCGCCACTaGAAGCGCCAGCTTGGCCTTGGCCTTGGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: GDVLHQLVDARH*KRQLGLGLGRH
Trigger: GTGGCGGCCAAGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACATCTCC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GTGGCCCCTCTTGCGCCGCCAGTTTCTGCAGTGCCTTaGTGGCCACAGACAGCGGGGCAGCCGCCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: VAPLAPPVSAVP*WPQTAGQPPAS
Trigger: AGAAGCTGGCGGCTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCAAGAGGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GACAGCGAGAGTGGCCCCTCTTGCGCCGCCAGTTTCTaGAGTGCCTTGCTGGCCACAGACAGCGGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: DSESGPSCAASF*SALLATDSGAA
Trigger: GGCTGCCCCGCTGTCTGTGGCCAGCAAGGCACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCGCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CTCGTCTGGCTTCTCCACGGTAAAGCGCACGCTGCCTaGGTCCAGCTCAGATGGCAGCCGGCAGCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: LVWLLHGKAHAA*VQLRWQPAALP
Trigger: CGGGAGCGCTGCCGGCTGCCATCTGAGCTGGACGCAGGCAGCGTGCGCTTTACCGTGGAGAAGCCAGACGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GAGGTCCTAGTCGCCCATCCCCCGGGAAGCCCTAGCTaGACGTTAATTGCGCGGAGGGGGCCCACCAGGCCA +
Preference number: 6 (lower is better)
Translates to: EVLVAHPPGSPS*TLIARRGPTRP
Trigger: TGGCCTGGTGGGCCCCCTCCGCGCAATTAACGTGCAGCTAGGGCTTCCCGGGGGATGGGCGACTAGGACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 72 bp TGTTGCCCGGCTGAGGGGTGCCATCCTCAGGGTGTGTaGGGACCTCTGTCTCGGGGTCCTCGTCCACCGGCA +
Preference number: 6 (lower is better)
Translates to: CCPAEGCHPQGV*GPLSRGPRPPA
Trigger: TGCCGGTGGACGAGGACCCCGAGACAGAGGTCCCCACACACCCTGAGGATGGCACCCCTCAGCCGGGCAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp TTTGCAGCAGCAGAGGCAGACAGCCCGAGCGGCGCATaGCCACGCAGCTCTCGGGCGAGCTGGACATGGCCA +
Preference number: 6 (lower is better)
Translates to: FAAAEADSPSGA*PRSSRASWTWP
Trigger: TGGCCATGTCCAGCTCGCCCGAGAGCTGCGTGGCCATGCGCCGCTCGGGCTGTCTGCCTCTGCTGCTGCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp ACGTGCAGGACGCGCATCTCCTTGCGCGCCAGGCCCTaGTCCGGCTGCGAGAAGACGATGTTGTGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: TCRTRISLRARP*SGCEKTMLCSA
Trigger: GGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGCCTGGCGCGCAAGGAGATGCGCGTCCTGCACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp GCACCTGCCTGTAGTCCTCACGGGTGGCGACGAGGCTaGACACATTGCGGAGGATGCCGCCGCCGCTCTCGA +
Preference number: 6 (lower is better)
Translates to: APACSPHGWRRG*THCGGCRRRSR
Trigger: TCGAGAGCGGCGGCGGCATCCTCCGCAATGTGTCCAGCCTCGTCGCCACCCGTGAGGACTACAGGCAGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp GACGAGGTGTGCAGGGCGGAGATGTCCTCCACCAGCTaGTCGATGCGCGCCACTGCAAGCGCCAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: DEVCRAEMSSTS*SMRATASASLA
Trigger: GGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACATCTCCGCCCTGCACACCTCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CAGTGCGGCCAGCGGGCAGGGCAGCATATGTTCGCGTaGGCAGTACCCGTCGCTGGCACTGCCGCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: QCGQRAGQHMFA*AVPVAGTAAVE
Trigger: CTCAACAGCGGCAGTGCCAGCGACGGGTACTGCCCACGCGAACATATGCTGCCCTGCCCGCTGGCCGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp TCTCCTGCACGTAGTTCTCCGACGAGCTGGACGGCGTaGCGTCTTCCACCCCCAGGCCCCGGCCTCGGTTAC +
Preference number: 6 (lower is better)
Translates to: SPARSSPTSWTA*RLPPPGPGLGY
Trigger: GTAACCGAGGCCGGGGCCTGGGGGTGGAAGACGCCACGCCGTCCAGCTCGTCGGAGAACTACGTGCAGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp TGCCCTGCCCGCTGCAAGGTTCACTGGGGATGGAGCTaGCGATGGACGGGCTCTCGAAGCTGCCCAGCGAGC +
Preference number: 6 (lower is better)
Translates to: CPARCKVHWGWS*RWTGSRSCPAS
Trigger: GCTCGCTGGGCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCGGGCAGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp TGCCGCTGCCCTGCCCGCTGCAAGGTTCACTGGGGATaGAGCTGGCGATGGACGGGCTCTCGAAGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: CRCPARCKVHWG*SWRWTGSRSCP
Trigger: TGGGCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCGGGCAGGGCAGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp AGCGTCTCGTCGCTGAGCGAGGCGGCGCTAGAGAAGTaGACCGGCGTGCCCTCCGCGGAGTCAGTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: SVSSLSEAALEK*TGVPSAESVQE
Trigger: CTCCTGCACTGACTCCGCGGAGGGCACGCCGGTCAACTTCTCTAGCGCCGCCTCGCTCAGCGACGAGACGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp TCACGGGCGCTGCGGGCCGACAGGTTCCAGAGCGTGCCGCACGCGTaGCTCACGATGGTCAGGCTGTGCGAAGTCAGATGCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SRALRADRFQSVPHA*LTMVRLCEVRCCSS
Trigger: GCTGCTGCAGCATCTGACTTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCGCCCGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 90 bp AGGTTGCGCAGGGCGGCGGCGCTGCCCATGGCGATCATCTTGTGCTaGGAGTGCACCAGATTACGCAGCATGCCCACGGCGCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RLRRAAALPMAIILC*ECTRLRSMPTAPRS
Trigger: GGACCTGGGCGCCGTGGGCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 90 bp AGCATATGTTCGCGTGGGCAGTACCCGTCGCTGGCACTGCCGCTGTaGAGGCTGTCGTTGGAGAGGCTGGCGTGGGCCGCCTTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: SICSRGQYPSLALPL*RLSLERLAWAALSR
Trigger: GCGGCTCAAGGCGGCCCACGCCAGCCTCTCCAACGACAGCCTCAACAGCGGCAGTGCCAGCGACGGGTACTGCCCACGCGAACATATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp GGAAGTCCAGGCTGGAGGCCCGACAAGACCCGCCCCTCTCTGGCTTaGGGTTGCCCCTCTGAGGAACCTGCAGGGCAGGAGTGCCCAAGG +
Preference number: 6 (lower is better)
Translates to: GSPGWRPDKTRPSLA*GCPSEEPAGQECPR
Trigger: CCTTGGGCACTCCTGCCCTGCAGGTTCCTCAGAGGGGCAACCCAAAGCCAGAGAGGGGCGGGTCTTGTCGGGCCTCCAGCCTGGACTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 72 bp CGCGGATCTGTGCCCGCTGCACCATCTCGTCCGAGGTaGCGAAGCGCTCCTCCATCAGCGAGCGGATGTGCT +
Preference number: 6 (lower is better)
Translates to: RGSVPAAPSRPR*RSAPPSASGCA
Trigger: AGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGGTGCAGCGGGCACAGATCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp GACAGCTTCATAACAGCACAGGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGGGCGCTGCCGGCGCCA +
Preference number: 6 (lower is better)
Translates to: DSFITAQVAWQI*GSMGIGALPAP
Trigger: TGGCGCCGGCAGCGCCCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGTTATGAAGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp TGTGCAGGGCGGAGATGTCCTCCACCAGCTGGTCGATaGGCGCCACTGCAAGCGCCAGCTTGGCCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: CAGRRCPPPAGR*APLQAPAWPWP
Trigger: AGGCCAAGGCCAAGCTGGCGCTTGCAGTGGCGCGCATCGACCAGCTGGTGGAGGACATCTCCGCCCTGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp TGGGGATGGAGCTGGCGATGGACGGGCTCTCGAAGCTaGCCAGCGAGCTCACAGAGCTGCAGCGGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: WGWSWRWTGSRS*PASSQSCSGSA
Trigger: TGCTGAGCCGCTGCAGCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp TCGGACGAGGCCTCCCGCGTGGCAGCTGCTGCCTGGTaGAGCCACGTGACAATTGAATTGGCGCCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SDEASRVAAAAW*SHVTIELAPSW
Trigger: CCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGAGGCCTCGTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp AACGGGATCCGCACGGGCGATCTCTGCGTCTTGTGCTaGTTCGCCAGAAGGGTGCGCGCCGGCGTTTTGGGC +
Preference number: 6 (lower is better)
Translates to: NGIRTGDLCVLC*FARRVRAGVLG
Trigger: GCCCAAAACGCCGGCGCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCGGATCCCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CAAATGCCCCCACAGGCCTCGGCCGGAGCCTGGTACTaGAGCCTCCAACGCCAGAAGGCAGGCAGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: QMPPQASAGAWY*SLQRQKAGSKG
Trigger: GCCTTTGCTGCCTGCCTTCTGGCGTTGGAGGCTGCAGTACCAGGCTCCGGCCGAGGCCTGTGGGGGCATTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 72 bp GCCCGCTGCAAGGTTCACTGGGGATGGAGCTGGCGATaGACGGGCTCTCGAAGCTGCCCAGCGAGCTCACAG +
Preference number: 6 (lower is better)
Translates to: ARCKVHWGWSWR*TGSRSCPASSQ
Trigger: CTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGTCCATCGCCAGCTCCATCCCCAGTGAACCTTGCAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GCTGGAGGCCCGACAAGACCCGCCCCTCTCTGGCTTTaGGTTGCCCCTCTGAGGAACCTGCAGGGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: AGGPTRPAPLWL*VAPLRNLQGRS
Trigger: ACTCCTGCCCTGCAGGTTCCTCAGAGGGGCAACCCAAAGCCAGAGAGGGGCGGGTCTTGTCGGGCCTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 72 bp GTCACTGGTGTGGACAAGTACAGGCCCACGTGGTGGTaGCCAGGCAATCCGGGGCGCAGAGGGGCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: VTGVDKYRPTWW*PGNPGRRGAGG
Trigger: TCCACCTGCCCCTCTGCGCCCCGGATTGCCTGGCCACCACCACGTGGGCCTGTACTTGTCCACACCAGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 72 bp GGAGTCACTGGTGTGGACAAGTACAGGCCCACGTGGTaGTGGCCAGGCAATCCGGGGCGCAGAGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: GVTGVDKYRPTW*WPGNPGRRGAG
Trigger: ACCTGCCCCTCTGCGCCCCGGATTGCCTGGCCACCACCACGTGGGCCTGTACTTGTCCACACCAGTGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 72 bp GCAGGAGTCACTGGTGTGGACAAGTACAGGCCCACGTaGTGGTGGCCAGGCAATCCGGGGCGCAGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: AGVTGVDKYRPT*WWPGNPGRRGA
Trigger: TGCCCCTCTGCGCCCCGGATTGCCTGGCCACCACCACGTGGGCCTGTACTTGTCCACACCAGTGACTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CAA 72 bp AGATTCCAGGCCCCGCGAGGGGCTCTGCACCCGCCCTaGAGGCACCCTCAAGCAGTGGCACGTGCTGATAGG +
Preference number: 6 (lower is better)
Translates to: RFQAPRGALHPP*RHPQAVARADR
Trigger: CCTATCAGCACGTGCCACTGCTTGAGGGTGCCTCAAGGGCGGGTGCAGAGCCCCTCGCGGGGCCTGGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp GCCCCATCCCTTGACTCTGCCAGCGCGCTGGCTTCTTaGTGCCTCTGGCCGTCTTCTGGCTCTGGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: APSLDSASALAS*CLWPSSGSGLA
Trigger: GGCCAGGCCAGAGCCAGAAGACGGCCAGAGGCACAAAGAAGCCAGCGCGCTGGCAGAGTCAAGGGATGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CAA 90 bp TCCCGCGTGGCAGCTGCTGCCTGGTGCAGCCACGTGACAATTGAATaGGCGCCCTCCTGGATGGCGCGCCACTCCACGCTATCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: SRVAAAAWCSHVTIE*APSWMARHSTLSRS
Trigger: CGACCTGGATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGCCACGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 72 bp CCTGCTGCACGTAGTGCTCGTGCAAGGCCAGCGCGCTaGGGCTGGAGGCGCACGAGAAGTTCTCGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: PAARSARARPAR*GWRRTRSSRLA
Trigger: AGCCAGACGAGAACTTCTCGTGCGCCTCCAGCCTCAGCGCGCTGGCCTTGCACGAGCACTACGTGCAGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 72 bp CGTGGCAGCTGCTGCCTGGTGCAGCCACGTGACAATTaGATTGGCGCCCTCCTGGATGGCGCGCCACTCCAC +
Preference number: 6 (lower is better)
Translates to: RGSCCLVQPRDN*IGALLDGAPLH
Trigger: GTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGCCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GAGGTGCCGAAGCGCTCCTCCATCAGCGAGCGGATGTaGTGGGCCTCGAACTCAAGCTGCTGCCGGATCAGG +
Preference number: 6 (lower is better)
Translates to: EVPKRSSISERM*WASNSSCCRIR
Trigger: CCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGCACCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp CGCAGGGCGGCGGCGCTGCCCATGGCGATCATCTTGTaGTTGGAGTGCACCAGATTACGCAGCATGCCCACG +
Preference number: 6 (lower is better)
Translates to: RRAAALPMAIIL*LECTRLRSMPT
Trigger: CGTGGGCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp ACGGGCTCTCGAAGCTGCCCAGCGAGCTCACAGAGCTaGAGCGGCTCAGCACAAGCGGTGTCTCCTGCACGT +
Preference number: 6 (lower is better)
Translates to: TGSRSCPASSQS*SGSAQAVSPAR
Trigger: ACGTGCAGGAGACACCGCTTGTGCTGAGCCGCTGCAGCTCTGTGAGCTCGCTGGGCAGCTTCGAGAGCCCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GTGCCGAAGCGCTCCTCCATCAGCGAGCGGATGTGCTaGGCCTCGAACTCAAGCTGCTGCCGGATCAGGTCC +
Preference number: 6 (lower is better)
Translates to: VPKRSSISERMC*ASNSSCCRIRS
Trigger: GGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGCAC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp GGGCCAGCAGGTTGCGCAGGGCGGCGGCGCTGCCCATaGCGATCATCTTGTGCTTGGAGTGCACCAGATTAC +
Preference number: 6 (lower is better)
Translates to: GPAGCAGRRRCP*RSSCAWSAPDY
Trigger: GTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp CGCGCTGAGGCTGGAGGCGCACGAGAAGTTCTCGTCTaGCTTCTCCACGGTAAAGCGCACGCTGCCTGCGTC +
Preference number: 6 (lower is better)
Translates to: RAEAGGAREVLV*LLHGKAHAACV
Trigger: GACGCAGGCAGCGTGCGCTTTACCGTGGAGAAGCCAGACGAGAACTTCTCGTGCGCCTCCAGCCTCAGCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp TGGATCCCACTGACAGCCCGGATACGAAGGACAGGATaGAGTCGGACTCGGACGAGGCCTCCCGCGTGGCAG +
Preference number: 6 (lower is better)
Translates to: WIPLTARIRRTG*SRTRTRPPAWQ
Trigger: CTGCCACGCGGGAGGCCTCGTCCGAGTCCGACTCCATCCTGTCCTTCGTATCCGGGCTGTCAGTGGGATCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp CCCAGAGGGAGAAACGAGGCCCTAGGAACCGAGGTCTaGCACCCAGATGCTGCCCCAGAGGGGCTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: PRGRNEALGTEV*HPDAAPEGLGS
Trigger: ACTTCCCAGCCCCTCTGGGGCAGCATCTGGGTGCCAGACCTCGGTTCCTAGGGCCTCGTTTCTCCCTCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 72 bp ACAGACAGCTGGGACAGCCTAACCCAGCAAGCCGACTaGCCAGCCCAGCACCCCCAGGCTCACAGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: TDSWDSLTQQAD*PAQHPQAHSQR
Trigger: TCTCTGGCTGTGAGCCTGGGGGTGCTGGGCTGGCCAGTCGGCTTGCTGGGTTAGGCTGTCCCAGCTGTCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CAA 72 bp CTGCGGGCCGACAGGTTCCAGAGCGTGCCGCACGCGTaGCTCACGATGGTCAGGCTGTGCGAAGTCAGATGC +
Preference number: 6 (lower is better)
Translates to: LRADRFQSVPHA*LTMVRLCEVRC
Trigger: GCATCTGACTTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 72 bp AGGGCGGCGGCGCTGCCCATGGCGATCATCTTGTGCTaGGAGTGCACCAGATTACGCAGCATGCCCACGGCG +
Preference number: 6 (lower is better)
Translates to: RAAALPMAIILC*ECTRLRSMPTA
Trigger: CGCCGTGGGCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 72 bp TGCATGAACGGGATCCGCACGGGCGATCTCTGCGTCTaGTGCTGCTTCGCCAGAAGGGTGCGCGCCGGCGTT +
Preference number: 6 (lower is better)
Translates to: CMNGIRTGDLCV*CCFARRVRAGV
Trigger: AACGCCGGCGCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCGGATCCCGTTCATGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS TCA 72 bp AGCCAGAAGACCACCTCCACCTTGCTGTTGCCCGGCTaGGGGGTGCCATCCTCAGGGTGTGTGGGGACCTCT +
Preference number: 6 (lower is better)
Translates to: SQKTTSTLLLPG*GVPSSGCVGTS
Trigger: AGAGGTCCCCACACACCCTGAGGATGGCACCCCTCAGCCGGGCAACAGCAAGGTGGAGGTGGTCTTCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS TCA 72 bp GGTCGGCCTCTCCTTCCCAGCCCCCAGGACACATCCTaGCAGCCGGACAAACACACAGACAGCTGGGACAGC +
Preference number: 6 (lower is better)
Translates to: GRPLLPSPQDTS*QPDKHTDSWDS
Trigger: GCTGTCCCAGCTGTCTGTGTGTTTGTCCGGCTGTCAGGATGTGTCCTGGGGGCTGGGAAGGAGAGGCCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 72 bp TGCGGGCCGACAGGTTCCAGAGCGTGCCGCACGCGTTaGTCACGATGGTCAGGCTGTGCGAAGTCAGATGCT +
Preference number: 6 (lower is better)
Translates to: CGPTGSRACRTR*SRWSGCAKSDA
Trigger: AGCATCTGACTTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp ATGAACGGGATCCGCACGGGCGATCTCTGCGTCTTGTaGTGCTTCGCCAGAAGGGTGCGCGCCGGCGTTTTG +
Preference number: 6 (lower is better)
Translates to: MNGIRTGDLCVL*CFARRVRAGVL
Trigger: CAAAACGCCGGCGCGCACCCTTCTGGCGAAGCAGCACAAGACGCAGAGATCGCCCGTGCGGATCCCGTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp GACAGCTTCATAACAGCACAGGTGGCCTGGCAGATCTaGGGCTCGATGGGGATCGGGGCTGTGGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: DSFITAQVAWQI*GSMGIGAVGTG
Trigger: CCCTGTGCCCACAGCCCCGATCCCCATCGAGCCGCAGATCTGCCAGGCCACCTGTGCTGTTATGAAGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 72 bp CTGGACATGGCCAGCAGCGTGCGCGCTGTATCCTCCTaGTCGCGCGTCGCCAACATGGACAACAGCCAGAAG +
Preference number: 6 (lower is better)
Translates to: LDMASSVRAVSS*SRVANMDNSQK
Trigger: CTTCTGGCTGTTGTCCATGTTGGCGACGCGCGACCAGGAGGATACAGCGCGCACGCTGCTGGCCATGTCCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp CAGCGAGGAAAGGGAGCTGCATCGGGACAGCGAGAGTaGCCCCTCTTGCGCCGCCAGTTTCTGCAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: QRGKGAASGQRE*PLLRRQFLQCL
Trigger: AAGGCACTGCAGAAACTGGCGGCGCAAGAGGGGCCACTCTCGCTGTCCCGATGCAGCTCCCTTTCCTCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 72 bp TTGCGCAGGGCGGCGGCGCTGCCCATGGCGATCATCTaGTGCTTGGAGTGCACCAGATTACGCAGCATGCCC +
Preference number: 6 (lower is better)
Translates to: LRRAAALPMAII*CLECTRLRSMP
Trigger: GGGCATGCTGCGTAATCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 72 bp GCAGCTGCTGCCTGGTGCAGCCACGTGACAATTGAATaGGCGCCCTCCTGGATGGCGCGCCACTCCACGCTA +
Preference number: 6 (lower is better)
Translates to: AAAAWCSHVTIE*APSWMARHSTL
Trigger: TAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCAGGCAGCAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CAA 90 bp CACTGCACCAGGGCAGTCACGCTGCCCGCCTCCCTCAGCACCTTCTaGCTGTTGATGTCGGCCCTCCAGGACAAGTTCCGAAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: HCTRAVTLPASLSTF*LLMSALQDKFRRML
Trigger: CAGCATCCTTCGGAACTTGTCCTGGAGGGCCGACATCAACAGCAAGAAGGTGCTGAGGGAGGCGGGCAGCGTGACTGCCCTGGTGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CAA 90 bp TGGAGTCGGGCTGTCCCGTCCTGCTCAGGGGACGCAGTGTGTGGCTaGCCATGTCATCCGGCTCCTTCTTGGTCTGTCCTGAGTCTCAGG +
Preference number: 6 (lower is better)
Translates to: WSRAVPSCSGDAVCG*PCHPAPSWSVLSLR
Trigger: CCTGAGACTCAGGACAGACCAAGAAGGAGCCGGATGACATGGCAAGCCACACACTGCGTCCCCTGAGCAGGACGGGACAGCCCGACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 72 bp AGCGTGCCGCACGCGTTGCTCACGATGGTCAGGCTGTaGGAAGTCAGATGCTGCAGCAGCGTCTGCAGACAG +
Preference number: 6 (lower is better)
Translates to: SVPHALLTMVRL*EVRCCSSVCRQ
Trigger: CTGTCTGCAGACGCTGCTGCAGCATCTGACTTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp GCCTCGAACTCAAGCTGCTGCCGGATCAGGTCCATCTaGATCGAGAACTGCGTCTCCACGTGCGGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: ASNSSCCRIRSI*IENCVSTCGSS
Trigger: CGAGCTGCCGCACGTGGAGACGCAGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CCAGAGCTGAGGCTGAAGCTATCGTCGGACGAGGTGTaGAGGGCGGAGATGTCCTCCACCAGCTGGTCGATG +
Preference number: 6 (lower is better)
Translates to: PELRLKLSSDEV*RAEMSSTSWSM
Trigger: CATCGACCAGCTGGTGGAGGACATCTCCGCCCTGCACACCTCGTCCGACGATAGCTTCAGCCTCAGCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CCAGACACGCGGGGCGGACAGACCACCAGCTGTCCCTaGCGATGGACAATGAAAACACCACGAAGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: PDTRGGQTTSCP*RWTMKTPRRPV
Trigger: CACTGGCCTTCGTGGTGTTTTCATTGTCCATCGGCAGGGACAGCTGGTGGTCTGTCCGCCCCGCGTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 72 bp GGTACGATCATGGGCGGGTCTTTTCCCAACGTCAAATaGCCCCACAGGCCTCGGCCGGAGCCTGGTACTGCA +
Preference number: 6 (lower is better)
Translates to: GTIMGGSFPNVK*PHRPRPEPGTA
Trigger: TGCAGTACCAGGCTCCGGCCGAGGCCTGTGGGGGCATTTGACGTTGGGAAAAGACCCGCCCATGATCGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 72 bp ACAGGTTCCAGAGCGTGCCGCACGCGTTGCTCACGATaGTCAGGCTGTGCGAAGTCAGATGCTGCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: TGSRACRTRCSR*SGCAKSDAAAA
Trigger: CGCTGCTGCAGCATCTGACTTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS CCA 72 bp TGGTGCAGCCACGTGACAATTGAATTGGCGCCCTCCTaGATGGCGCGCCACTCCACGCTATCCAGGTCGGAG +
Preference number: 6 (lower is better)
Translates to: WCSHVTIELAPS*MARHSTLSRSE
Trigger: CTCCGACCTGGATAGCGTGGAGTGGCGCGCCATCCAGGAGGGCGCCAATTCAATTGTCACGTGGCTGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp ACGCGGGGCGGACAGACCACCAGCTGTCCCTGCCGATaGACAATGAAAACACCACGAAGGCCAGTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: TRGGQTTSCPCR*TMKTPRRPVGD
Trigger: GTCACCCACTGGCCTTCGTGGTGTTTTCATTGTCCATCGGCAGGGACAGCTGGTGGTCTGTCCGCCCCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 72 bp GCTGAACGTCCAACTGACCAGTCGACCGACAGACGATaGGTCGGCCTCTCCTTCCCAGCCCCCAGGACACAT +
Preference number: 6 (lower is better)
Translates to: AERPTDQSTDRR*VGLSFPAPRTH
Trigger: ATGTGTCCTGGGGGCTGGGAAGGAGAGGCCGACCCATCGTCTGTCGGTCGACTGGTCAGTTGGACGTTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CAA 72 bp GCTGTCCCGTCCTGCTCAGGGGACGCAGTGTGTGGCTaGCCATGTCATCCGGCTCCTTCTTGGTCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: AVPSCSGDAVCG*PCHPAPSWSVL
Trigger: CAGGACAGACCAAGAAGGAGCCGGATGACATGGCAAGCCACACACTGCGTCCCCTGAGCAGGACGGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS TCA 72 bp AGGTGGCAGAGGCTGGCACCTCCCACCCTGATCCGATaGTGTCCAAGGCTGTTCAGGTCTCCAGTGGGGATC +
Preference number: 6 (lower is better)
Translates to: RWQRLAPPTLIR*CPRLFRSPVGI
Trigger: GATCCCCACTGGAGACCTGAACAGCCTTGGACATCATCGGATCAGGGTGGGAGGTGCCAGCCTCTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 72 bp AGCGAGCGGATGTGCTGGGCCTCGAACTCAAGCTGCTaGCGGATCAGGTCCATCTGCATCGAGAACGTCTCC +
Preference number: 6 (lower is better)
Translates to: SERMCWASNSSC*RIRSICIENVS
Trigger: GGAGACGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238483.5
ENST00000593146.1
CDS GCA 72 bp CGCCATCCACCTGGCAGATGGCCGCCTTGTTCTCTGTaGTGTGTGCAGACAGATTCCACAGGGCGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RHPPGRWPPCSL*CVQTDSTGRSA
Trigger: TGCTGAGCGCCCTGTGGAATCTGTCTGCACACAGCACAGAGAACAAGGCGGCCATCTGCCAGGTGGATGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp AGCGAGCGGATGTGCTGGGCCTCGAACTCAAGCTGCTaGCGGATCAGGTCCATCTGCATCGAGAACTGCGTC +
Preference number: 6 (lower is better)
Translates to: SERMCWASNSSC*RIRSICIENCV
Trigger: GACGCAGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS CCA 72 bp GGACCTCCTTCATGCCCGACGTCTCTGTCTCCAGCTTaGACAGGTGGCTGGAGTTGTCCCTTAGCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: GPPSCPTSLSPA*TGGWSCPLAPA
Trigger: GGCAGGAGCTAAGGGACAACTCCAGCCACCTGTCCAAGCTGGAGACAGAGACGTCGGGCATGAAGGAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 72 bp TGCGCGCTGTATCCTCCTGGTCGCGCGTCGCCAACATaGACAACAGCCAGAAGACCACCTCCACCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: CALYPPGRASPT*TTARRPPPPCC
Trigger: ACAGCAAGGTGGAGGTGGTCTTCTGGCTGTTGTCCATGTTGGCGACGCGCGACCAGGAGGATACAGCGCGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS TCA 72 bp TGGACACATTGCGGAGGATGCCGCCGCCGCTCTCGATaGTGGCCAGCGAGTTGCTCTGACACTTGTAGGTCA +
Preference number: 6 (lower is better)
Translates to: WTHCGGCRRRSR*WPASCSDTCRS
Trigger: TGACCTACAAGTGTCAGAGCAACTCGCTGGCCATCATCGAGAGCGGCGGCGGCATCCTCCGCAATGTGTCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp AGCTTGGACAGGTGGCTGGAGTTGTCCCTTAGCTCCTaGCTCAGGTGGCTGTTCTCAGCCTTCAAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SLDRWLELSLSS*LRWLFSAFKAS
Trigger: GGAGGCCTTGAAGGCTGAGAACAGCCACCTGAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTCCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS GCA 72 bp ATCAGCGAGCGGATGTGCTGGGCCTCGAACTCAAGCTaGTGCCGGATCAGGTCCATCTGCATCGAGAACGTC +
Preference number: 6 (lower is better)
Translates to: ISERMCWASNSS*CRIRSICIENV
Trigger: GACGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238483.5
ENST00000593146.1
CDS GCA 72 bp CACCTGGCAGATGGCCGCCTTGTTCTCTGTGCTGTGTaGAGACAGATTCCACAGGGCGCTCAGCACGCTCTT +
Preference number: 6 (lower is better)
Translates to: HLADGRLVLCAV*RQIPQGAQHAL
Trigger: AAGAGCGTGCTGAGCGCCCTGTGGAATCTGTCTGCACACAGCACAGAGAACAAGGCGGCCATCTGCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000590469.6
ENST00000593146.1
CDS GCA 72 bp ATCAGCGAGCGGATGTGCTGGGCCTCGAACTCAAGCTaGTGCCGGATCAGGTCCATCTGCATCGAGAACTGC +
Preference number: 6 (lower is better)
Translates to: ISERMCWASNSS*CRIRSICIENC
Trigger: GCAGTTCTCGATGCAGATGGACCTGATCCGGCAGCAGCTTGAGTTCGAGGCCCAGCACATCCGCTCGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233607.6
ENST00000535453.5
ENST00000590469.6
CDS GCA 72 bp CTCGAGCCCCATGTTCCAGCTGAGGTCACCATCCCATaGCCAGCCAGGTGGAAGGACCAGATGACGTGCAAA +
Preference number: 6 (lower is better)
Translates to: LEPHVPAEVTIP*PARWKDQMTCK
Trigger: TTTGCACGTCATCTGGTCCTTCCACCTGGCTGGGCATGGGATGGTGACCTCAGCTGGAACATGGGGCTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CCA 72 bp TTCATGCCCGACGTCTCTGTCTCCAGCTTGGACAGGTaGCTGGAGTTGTCCCTTAGCTCCTGCCTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: FMPDVSVSSLDR*LELSLSSCLRW
Trigger: CCACCTGAGGCAGGAGCTAAGGGACAACTCCAGCCACCTGTCCAAGCTGGAGACAGAGACGTCGGGCATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233607.6
ENST00000238483.5
ENST00000535453.5
ENST00000587149.6
ENST00000587869.5
ENST00000590469.6
ENST00000590877.5
ENST00000593146.1
CDS CCA 72 bp AGATGGGATGATGGGGTGGCCTCTCTCACTCAGCCTTaGGAAGGGAGGCGAGGTAGTTCCTGGAGCACCACA +
Preference number: 6 (lower is better)
Translates to: RWDDGVASLTQP*EGRRGSSWSTT
Trigger: TGTGGTGCTCCAGGAACTACCTCGCCTCCCTTCCCAAGGCTGAGTGAGAGAGGCCACCCCATCATCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CAA 90 bp CATCCGGCTCCTTCTTGGTCTGTCCTGAGTCTCAGGGACCACCATTaGGCTGTTCCCAGAGGGAGAAACGAGGCCCTAGGAACCGAGGTC +
Preference number: 6 (lower is better)
Translates to: HPAPSWSVLSLRDHH*AVPRGRNEALGTEV
Trigger: GACCTCGGTTCCTAGGGCCTCGTTTCTCCCTCTGGGAACAGCCAAATGGTGGTCCCTGAGACTCAGGACAGACCAAGAAGGAGCCGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CAA 90 bp CTCAGGGGACGCAGTGTGTGGCTTGCCATGTCATCCGGCTCCTTCTaGGTCTGTCCTGAGTCTCAGGGACCACCATTTGGCTGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: LRGRSVWLAMSSGSF*VCPESQGPPFGCSQ
Trigger: CTGGGAACAGCCAAATGGTGGTCCCTGAGACTCAGGACAGACCAAGAAGGAGCCGGATGACATGGCAAGCCACACACTGCGTCCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS TCA 72 bp GCGGACAGACCACCAGCTGTCCCTGCCGATGGACAATaGAAACACCACGAAGGCCAGTGGGTGACACCTAAG +
Preference number: 6 (lower is better)
Translates to: ADRPPAVPADGQ*KHHEGQWVTPK
Trigger: CTTAGGTGTCACCCACTGGCCTTCGTGGTGTTTTCATTGTCCATCGGCAGGGACAGCTGGTGGTCTGTCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS CAA 72 bp CGCAGTGTGTGGCTTGCCATGTCATCCGGCTCCTTCTaGGTCTGTCCTGAGTCTCAGGGACCACCATTTGGC +
Preference number: 6 (lower is better)
Translates to: RSVWLAMSSGSF*VCPESQGPPFG
Trigger: GCCAAATGGTGGTCCCTGAGACTCAGGACAGACCAAGAAGGAGCCGGATGACATGGCAAGCCACACACTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS TCA 72 bp GCTTGCCATGTCATCCGGCTCCTTCTTGGTCTGTCCTaGGTCTCAGGGACCACCATTTGGCTGTTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: ACHVIRLLLGLS*VSGTTIWLFPE
Trigger: CTCTGGGAACAGCCAAATGGTGGTCCCTGAGACTCAGGACAGACCAAGAAGGAGCCGGATGACATGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS TCA 72 bp GTTGGGACTTCCTTTCCCAGCCTCTCTAAGATGGGATaGTGGGGTGGCCTCTCTCACTCAGCCTTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: VGTSFPSLSKMG*WGGLSHSALGR
Trigger: CCTTCCCAAGGCTGAGTGAGAGAGGCCACCCCATCATCCCATCTTAGAGAGGCTGGGAAAGGAAGTCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CCA 72 bp ACTTCCCGAGCGTTTACTCTGCGCCAGGTACGATCATaGGCGGGTCTTTTCCCAACGTCAAATGCCCCCACA +
Preference number: 6 (lower is better)
Translates to: TSRAFTLRQVRS*AGLFPTSNAPT
Trigger: TGTGGGGGCATTTGACGTTGGGAAAAGACCCGCCCATGATCGTACCTGGCGCAGAGTAAACGCTCGGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS CAA 72 bp CCTTCTTGGTCTGTCCTGAGTCTCAGGGACCACCATTaGGCTGTTCCCAGAGGGAGAAACGAGGCCCTAGGA +
Preference number: 6 (lower is better)
Translates to: PSWSVLSLRDHH*AVPRGRNEALG
Trigger: TCCTAGGGCCTCGTTTCTCCCTCTGGGAACAGCCAAATGGTGGTCCCTGAGACTCAGGACAGACCAAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535453.5
CDS GCA 72 bp GCACCCAACTTTCCAGAGTTACCCACGATCCATCCATaGATTCAGCGACTTCCCGAGCGTTTACTCTGCGCC +
Preference number: 6 (lower is better)
Translates to: APNFPELPTIHP*IQRLPERLLCA
Trigger: GGCGCAGAGTAAACGCTCGGGAAGTCGCTGAATGCATGGATGGATCGTGGGTAACTCTGGAAAGTTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593146.1
CDS TCA 72 bp CCGATGGACAATGAAAACACCACGAAGGCCAGTGGGTaGCACCTAAGCTGTGCAGAAACGGCAGGACAGATG +
Preference number: 6 (lower is better)
Translates to: PMDNENTTKASG*HLSCAETAGQM
Trigger: CATCTGTCCTGCCGTTTCTGCACAGCTTAGGTGTCACCCACTGGCCTTCGTGGTGTTTTCATTGTCCATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535453.5