RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APC (Homo sapiens)

Ensembl gene IDs: ENSG00000134982

Ensembl transcript IDs: ENST00000257430.9, ENST00000502371.2, ENST00000505084.1, ENST00000505350.1, ENST00000507379.5, ENST00000508376.6, ENST00000508624.5, ENST00000509732.5, ENST00000512211.6

Found 1333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATTTCACAGATGGCTTGGCTCCTCTAGGAGAAGTGGTGGCTGTTTaGCCTTCACTAGGGCTTTTGGAGGCTGGAGTCTTAAGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: DFTDGLAPLGEVVAV*PSLGLLEAGVLRGG
Trigger: CCCACCCCTTAAGACTCCAGCCTCCAAAAGCCCTAGTGAAGGTCAAACAGCCACCACTTCTCCTAGAGGAGCCAAGCCATCTGTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp GGTTTGAGCTGTTTGAGGAGGTGGTGGAGGTGTTTTACTTCTGCTTaGTGGCATGGTTTGTCCAGGGCTATCTGGAAGATCACTGGGGCT +
Preference number: 1 (lower is better)
Translates to: GLSCLRRWWRCFTSA*WHGLSRAIWKITGA
Trigger: AGCCCCAGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAAACAGCTCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 90 bp AGTGGTAGACCCAGAACTTCTGTCTTCCTGAGAGGTATGAATGGCTaGCACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGA +
Preference number: 1 (lower is better)
Translates to: SGRPRTSVFLRGMNG*HFFHDFGNLGCSGG
Trigger: TCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGCCATTCATACCTCTCAGGAAGACAGAAGTTCTGGGTCTACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 90 bp GAAGATAAACTAGAACCCTGCAGTCTGCTGGATTTGGTTCTAGGGTaGTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGAC +
Preference number: 1 (lower is better)
Translates to: EDKLEPCSLLDLVLG*CDTAGTSLTGSSAD
Trigger: GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATCCAGCAGACTGCAGGGTTCTAGTTTATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 90 bp ATCAGCATCTGGAAGAACCTGGACCCTCTGAACTGCAGCATTTACTaGAGCTTGCTTAGGTCCACTCTCTCTCTTTTCAGCAGTAGGTGC +
Preference number: 1 (lower is better)
Translates to: ISIWKNLDPLNCSIY*SLLRSTLSLFSSRC
Trigger: GCACCTACTGCTGAAAAGAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCTTCCAGATGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTaGTTCATGAGCTTCCTGCCACTCCCAACAGGTTTCACAGTAAGC +
Preference number: 1 (lower is better)
Translates to: MFNRSWHWIFVLVHA*FMSFLPLPTGFTVS
Trigger: GCTTACTGTGAAACCTGTTGGGAGTGGCAGGAAGCTCATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp TTGAGCTGTTTGAGGAGGTGGTGGAGGTGTTTTACTTCTGCTTGGTaGCATGGTTTGTCCAGGGCTATCTGGAAGATCACTGGGGCTTAT +
Preference number: 1 (lower is better)
Translates to: LSCLRRWWRCFTSAW*HGLSRAIWKITGAY
Trigger: ATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAAACAGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 90 bp ACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTaGAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGA +
Preference number: 1 (lower is better)
Translates to: TSSMTLAIWAAVVEI*KPRFEEVPGFSVAG
Trigger: TCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 90 bp CCTGATCTAGAAGGTGCTTTACTTGACCCACCTATTTGGGATGTCTaGCTGGCAACAGGGCTTAATTCTGATTTCACAGATGGCTTGGCT +
Preference number: 1 (lower is better)
Translates to: PDLEGALLDPPIWDV*LATGLNSDFTDGLA
Trigger: AGCCAAGCCATCTGTGAAATCAGAATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACCTTCTAGATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp TGGAAGATCACTGGGGCTTATAATGCCACTTACCATTCCACTGCATaGTTCACTCTGAACGGAGCTGGCAATCGAACGACTCTCAAAACT +
Preference number: 1 (lower is better)
Translates to: WKITGAYNATYHSTA*FTLNGAGNRTTLKT
Trigger: AGTTTTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTGGCATTATAAGCCCCAGTGATCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 90 bp GGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTGGCTGTTTCATaGTCCATTCGTGTAGTTGAACCCTGCGTATATATCCATCGCCAC +
Preference number: 1 (lower is better)
Translates to: GAECVLLELKTLAVS*SIRVVEPCVYIHRH
Trigger: GTGGCGATGGATATATACGCAGGGTTCAACTACACGAATGGACCATGAAACAGCCAGTGTTTTGAGTTCTAGTAGCACACACTCTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp AGGTGTTTTACTTCTGCTTGGTGGCATGGTTTGTCCAGGGCTATCTaGAAGATCACTGGGGCTTATAATGCCACTTACCATTCCACTGCA +
Preference number: 1 (lower is better)
Translates to: RCFTSAWWHGLSRAI*KITGAYNATYHSTA
Trigger: TGCAGTGGAATGGTAAGTGGCATTATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp ATTTTTAGGTACTTCTCGCTTGGTTTGAGCTGTTTGAGGAGGTGGTaGAGGTGTTTTACTTCTGCTTGGTGGCATGGTTTGTCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: IFRYFSLGLSCLRRW*RCFTSAWWHGLSRA
Trigger: AGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTACCTAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 90 bp CTGGGGCTTATAATGCCACTTACCATTCCACTGCATGGTTCACTCTaGACGGAGCTGGCAATCGAACGACTCTCAAAACTATCAAGTGAA +
Preference number: 1 (lower is better)
Translates to: LGLIMPLTIPLHGSL*TELAIERLSKLSSE
Trigger: TTCACTTGATAGTTTTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTGGCATTATAAGCCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 90 bp TCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTaGTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTG +
Preference number: 1 (lower is better)
Translates to: SEPLAPRDLYGETHS*CPKCGWNLRCLSSV
Trigger: CACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 90 bp GAAATTGAGTTTCGGCCAGGAGACTGTATAGGTCTACTTAATGGTTaGTGGGCAGGTCTTGAAGGGGTCGAATCTCTAGATCCTGATCTA +
Preference number: 1 (lower is better)
Translates to: EIEFRPGDCIGLLNG*WAGLEGVESLDPDL
Trigger: TAGATCAGGATCTAGAGATTCGACCCCTTCAAGACCTGCCCAGCAACCATTAAGTAGACCTATACAGTCTCCTGGCCGAAACTCAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp AGGAGAGGAAGACATCCAGACTGTCGCATGGATATACAGCTGTCTTaGGAGCTAGACATAGCTAGCAAAGTTCGCGACATATCATCCTTA +
Preference number: 1 (lower is better)
Translates to: RRGRHPDCRMDIQLS*ELDIASKVRDISSL
Trigger: TAAGGATGATATGTCGCGAACTTTGCTAGCTATGTCTAGCTCCCAAGACAGCTGTATATCCATGCGACAGTCTGGATGTCTTCCTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp ATTGAGTTTCGGCCAGGAGACTGTATAGGTCTACTTAATGGTTGCTaGGCAGGTCTTGAAGGGGTCGAATCTCTAGATCCTGATCTAGAA +
Preference number: 1 (lower is better)
Translates to: IEFRPGDCIGLLNGC*AGLEGVESLDPDLE
Trigger: TTCTAGATCAGGATCTAGAGATTCGACCCCTTCAAGACCTGCCCAGCAACCATTAAGTAGACCTATACAGTCTCCTGGCCGAAACTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 90 bp GCAAAATGTAATAAAGTATCAGCATCTGGAAGAACCTGGACCCTCTaGACTGCAGCATTTACTGCAGCTTGCTTAGGTCCACTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: AKCNKVSASGRTWTL*TAAFTAACLGPLSL
Trigger: GAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCTTCCAGATGCTGATACTTTATTACATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTaGCTGGCTGATTCTGAAGATAAACTAGAACCCTGCAGTCTGCTG +
Preference number: 1 (lower is better)
Translates to: LLEGDFAPEENSTAL*LADSEDKLEPCSLL
Trigger: CAGCAGACTGCAGGGTTCTAGTTTATCTTCAGAATCAGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 90 bp TTTATTTTTAGGTACTTCTCGCTTGGTTTGAGCTGTTTGAGGAGGTaGTGGAGGTGTTTTACTTCTGCTTGGTGGCATGGTTTGTCCAGG +
Preference number: 1 (lower is better)
Translates to: FIFRYFSLGLSCLRR*WRCFTSAWWHGLSR
Trigger: CCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTACCTAAAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 90 bp ACTAGAACTCAAAACACTGGCTGTTTCATGGTCCATTCGTGTAGTTaGACCCTGCGTATATATCCATCGCCACCTTTTGCTGTGACATCA +
Preference number: 1 (lower is better)
Translates to: TRTQNTGCFMVHSCS*TLRIYPSPPFAVTS
Trigger: TGATGTCACAGCAAAAGGTGGCGATGGATATATACGCAGGGTTCAACTACACGAATGGACCATGAAACAGCCAGTGTTTTGAGTTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 90 bp TACTGCAGCTTGCTTAGGTCCACTCTCTCTCTTTTCAGCAGTAGGTaGTTTATTTTTAGGTACTTCTCGCTTGGTTTGAGCTGTTTGAGG +
Preference number: 1 (lower is better)
Translates to: YCSLLRSTLSLFSSR*FIFRYFSLGLSCLR
Trigger: CCTCAAACAGCTCAAACCAAGCGAGAAGTACCTAAAAATAAAGCACCTACTGCTGAAAAGAGAGAGAGTGGACCTAAGCAAGCTGCAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 90 bp TACTTGAGGAGCTATTTCGAACTCCTGGAATATGAATCATTGTCCTaGCTCGAGAGATTGAAGGCATGTTTGCTTGAAGGGGCTGTTTCA +
Preference number: 1 (lower is better)
Translates to: YLRSYFELLEYESLS*LERLKACLLEGAVS
Trigger: TGAAACAGCCCCTTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGGACAATGATTCATATTCCAGGAGTTCGAAATAGCTCCTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp ACACTCGCAATAACCTGCTGTAAGTCTTCACTTTCAGATTTTAGTTaGGCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTA +
Preference number: 1 (lower is better)
Translates to: TLAITCCKSSLSDFS*ATSALMQPFIEHSV
Trigger: TACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGCCCAACTAAAATCTGAAAGTGAAGACTTACAGCAGGTTATTGCGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp CACTCAGGCTGGATGAACAAGAAAATCCATCTGGAGTACTTTCCGTaGCAAAATGTAATAAAGTATCAGCATCTGGAAGAACCTGGACCC +
Preference number: 1 (lower is better)
Translates to: HSGWMNKKIHLEYFP*QNVIKYQHLEEPGP
Trigger: GGGTCCAGGTTCTTCCAGATGCTGATACTTTATTACATTTTGCCACGGAAAGTACTCCAGATGGATTTTCTTGTTCATCCAGCCTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp TCTCTAGATCCTGATCTAGAAGGTGCTTTACTTGACCCACCTATTTaGGATGTCTGCCTGGCAACAGGGCTTAATTCTGATTTCACAGAT +
Preference number: 1 (lower is better)
Translates to: SLDPDLEGALLDPPI*DVCLATGLNSDFTD
Trigger: ATCTGTGAAATCAGAATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACCTTCTAGATCAGGATCTAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 90 bp CTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTaGCTAGACCAATTCCGCGTTCTCTCTCCAAACTTCTATCTTTTT +
Preference number: 1 (lower is better)
Translates to: LALKKFLDFLLLDGS*LDQFRVLSPNFYLF
Trigger: AAAAAGATAGAAGTTTGGAGAGAGAACGCGGAATTGGTCTAGGCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 90 bp GTTTGTCTGGCTCCGGTAAGTAAGAGTGCCAACCAAAAATGCAAGTaGACCATCTACAGCACATATATCAGCTTTATTCTCAGTGCAATG +
Preference number: 1 (lower is better)
Translates to: VCLAPVSKSANQKCK*TIYSTYISFILSAM
Trigger: CATTGCACTGAGAATAAAGCTGATATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACTCTTACTTACCGGAGCCAGACAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp GAATTTCCCAACAATACAGAGTCTTTGTCATTGCCATGTAAAAGCTaGATGAGGAGAGGAAGACATCCAGACTGTCGCATGGATATACAG +
Preference number: 1 (lower is better)
Translates to: EFPNNTESLSLPCKS*MRRGRHPDCRMDIQ
Trigger: CTGTATATCCATGCGACAGTCTGGATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 90 bp GAGCTAGACATAGCTAGCAAAGTTCGCGACATATCATCCTTATCATaGGTACCAAGCATTGACAACAATGAATACACCATTTCCACCTTG +
Preference number: 1 (lower is better)
Translates to: ELDIASKVRDISSLS*VPSIDNNEYTISTL
Trigger: CAAGGTGGAAATGGTGTATTCATTGTTGTCAATGCTTGGTACTCATGATAAGGATGATATGTCGCGAACTTTGCTAGCTATGTCTAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 90 bp TTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTaGTCGCCAAGACAAATTCCTCAAAACACTCGCAATAACCTGCTG +
Preference number: 1 (lower is better)
Translates to: FHTSNFSQRLFTIYI*SPRQIPQNTRNNLL
Trigger: CAGCAGGTTATTGCGAGTGTTTTGAGGAATTTGTCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 90 bp AGGCTTGTGACTTTTCCCTTTGGGCATAGCAGAATTAATGCATTCTaGAAGAATATCACCTTCCTCTGCTTTATTGTCATCCAATTCAGG +
Preference number: 1 (lower is better)
Translates to: RLVTFPFGHSRINAF*KNITFLCFIVIQFR
Trigger: CCTGAATTGGATGACAATAAAGCAGAGGAAGGTGATATTCTTGCAGAATGCATTAATTCTGCTATGCCCAAAGGGAAAAGTCACAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp CAAGAATATCACCTTCCTCTGCTTTATTGTCATCCAATTCAGGTATaGTTACAGATGAGGTTTTTCCTCCTTGAGCCTCATCTGTACTTC +
Preference number: 1 (lower is better)
Translates to: QEYHLPLLYCHPIQV*LQMRFFLLEPHLYF
Trigger: GAAGTACAGATGAGGCTCAAGGAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGGAAGGTGATATTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 90 bp TTTATTGGCTGCTTTGCAATAGCTTGTGTCTTATTAGCTGATTGTTaGTTGGAGGTTAGTTCTGTGTGGCTGGTAACTTTAGCCTCTGAT +
Preference number: 1 (lower is better)
Translates to: FIGCFAIACVLLADC*LEVSSVWLVTLASD
Trigger: ATCAGAGGCTAAAGTTACCAGCCACACAGAACTAACCTCCAACCAACAATCAGCTAATAAGACACAAGCTATTGCAAAGCAGCCAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 90 bp TGTATGGAGAAACACATTCCTGCTGTCCAAAATGTGGTTGGAACTTaGGGTGTTTATCATCAGTGCTCTCAGTATAAACAGGATAAGTTG +
Preference number: 1 (lower is better)
Translates to: CMEKHIPAVQNVVGT*GVYHQCSQYKQDKL
Trigger: CAACTTATCCTGTTTATACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGAATGTGTTTCTCCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 90 bp CACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACTaGAAAACTTACTTTCATCATCTTCAGAATAGGATTCAATCGAGG +
Preference number: 1 (lower is better)
Translates to: HYVFYGLGRLGIDHN*KTYFHHLQNRIQSR
Trigger: CCTCGATTGAATCCTATTCTGAAGATGATGAAAGTAAGTTTTGCAGTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 90 bp GCTTGTGTCTTATTAGCTGATTGTTGGTTGGAGGTTAGTTCTGTGTaGCTGGTAACTTTAGCCTCTGATTCCTTATTTTCTTTTGCCTTT +
Preference number: 1 (lower is better)
Translates to: ACVLLADCWLEVSSV*LVTLASDSLFSFAF
Trigger: AAAGGCAAAAGAAAATAAGGAATCAGAGGCTAAAGTTACCAGCCACACAGAACTAACCTCCAACCAACAATCAGCTAATAAGACACAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 90 bp TTTGAATTTTCTGAGCATGGCAAAGTGCTGATTATACTTCACTGCTaGGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTC +
Preference number: 1 (lower is better)
Translates to: FEFSEHGKVLIILHC*DLALTYRVIKSVHV
Trigger: GACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGAAGTATAATCAGCACTTTGCCATGCTCAGAAAATTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR TCA 90 bp TCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTaGTTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAAT +
Preference number: 1 (lower is better)
Translates to: SAICRVLAESASCVV*LHPISSSADDKDDN
Trigger: ATTATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 90 bp GCCTCCCAAAATAAGACCAGTGAAGACAAAGTATACTATCAAATATaGCTTCCAGAACAAAAACCCTCTAACAAGAATCAAACCTATTTA +
Preference number: 1 (lower is better)
Translates to: ASQNKTSEDKVYYQI*LPEQKPSNKNQTYL
Trigger: TAAATAGGTTTGATTCTTGTTAGAGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCTTATTTTGGGAGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR TCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGACCATTGGCTCCCCGTaGCCTGTATGGAGAAACACA +
Preference number: 2 (lower is better)
Translates to: QVDFWVSEHHFWREISLLTIGSP*PVWRNT
Trigger: TGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGT...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAATGATGTTGTGGAGTaGTGCACTGGCCCTGGCCCG +
Preference number: 2 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGNDVVE*CTGPGP
Trigger: CGGGCCAGGGCCAGTGCAGCACTCCACAACATCATT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCCTCGGATTTCACGCCTaGCTCTCTTGTCATCAGGCT +
Preference number: 2 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICLGFHA*LSCHQA
Trigger: AGCCTGATGACAAGAGAGGCAGGCGTGAAATCCGAG...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp TGGTTTGAGCTGTTTGAGGAGGTGGTGGAGGTGTTTTACTTCTGCTaGGTGGCATGGTTTGTCCAGGGCTATCTGGAAGATCACTGGGGC +
Preference number: 2 (lower is better)
Translates to: WFELFEEVVEVFYFC*VAWFVQGYLEDHWG
Trigger: GCCCCAGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAAACAGCTCAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGCTGACACTTCTTCCATaGCTTTGGCAATCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: QVDFWVSEHHFWREISLLLTLLP*LWQSGL
Trigger: CAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAG...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGGGTTCTAGGGTGCTGTaGCACTGCTGGAACTTCGCT +
Preference number: 2 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGGSRVL*HCWNFA
Trigger: AGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACC...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCTCTGGGCTGCAGTGGTaGAGATCTGCAAACCTCGCT +
Preference number: 2 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVSGLQW*RSANLA
Trigger: AGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGA...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCATGACTTTGGCAATCTaGGCTGCAGTGGTGGAGATC +
Preference number: 2 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICMTLAI*AAVVEI
Trigger: GATCTCCACCACTGCAGCCCAGATTGCCAAAGTCAT...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCCAGGCTGTGAGTGAATaGTGTTGTGGAGTGCTGCAC +
Preference number: 2 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVQAVSE*CCGVLH
Trigger: GTGCAGCACTCCACAACATCATTCACTCACAGCCTG...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTTGCTGGATGGTAGTTaGCTAGACCAATTCCGCGTT +
Preference number: 2 (lower is better)
Translates to: QVDFWVSEHHFWREISLLLLDGS*LDQFRV
Trigger: AACGCGGAATTGGTCTAGGCAACTACCATCCAGCAA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCACTCTGTGCAGAACTTaGATGGAGCTGATTCTGCCT +
Preference number: 2 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICTLCRT*MELILP
Trigger: AGGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGT...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACTGTGGAGTGCTGCACTaGCCCTGGCCCGAGCCTCTT +
Preference number: 2 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDCGVLH*PWPEPL
Trigger: AAGAGGCTCGGGCCAGGGCCAGTGCAGCACTCCACA...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp CTGGCTGATTCTGAAGATAAACTAGAACCCTGCAGTCTGCTGGATTaGGTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGA +
Preference number: 2 (lower is better)
Translates to: LADSEDKLEPCSLLD*VLGCCDTAGTSLTG
Trigger: TCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATCCAGCAGACTGCAGGGTTCTAGTTTATCTTCAGAATCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CAA 90 bp TTGAGGAGGTGGTGGAGGTGTTTTACTTCTGCTTGGTGGCATGGTTaGTCCAGGGCTATCTGGAAGATCACTGGGGCTTATAATGCCACT +
Preference number: 2 (lower is better)
Translates to: LRRWWRCFTSAWWHG*SRAIWKITGAYNAT
Trigger: AGTGGCATTATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACCTGCAAACCTCGCTTTaGAGAAGTTCCTGGATTTTC +
Preference number: 2 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADLQTSL*RSSWIF
Trigger: GAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAG...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACATCTGTTCCAAAAGATaGAGGACTCGGATTTCACGC +
Preference number: 2 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADICSKR*RTRISR
Trigger: GCGTGAAATCCGAGTCCTTCATCTTTTGGAACAGAT...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAGTGCCAACCAAAAATaGAAGTGCACCATCTACAGC +
Preference number: 2 (lower is better)
Translates to: QVDFWVSEHHFWREISLLSANQK*KCTIYS
Trigger: GCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACT...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGGTTCAGGTGGACTTTTaGGTGTCTGAGCACCACTTT +
Preference number: 2 (lower is better)
Translates to: VDFWVSEHHFWREISLLKVQVDF*VSEHHF
Trigger: AAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAAC...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCACACCATTTCCACCTTaGTTCCCAGATGACTTGTCA +
Preference number: 2 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICTPFPP*FPDDLS
Trigger: TGACAAGTCATCTGGGAACCAAGGTGGAAATGGTGT...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTGTCCTGGTCCATGCCTaGTTCATGAGCTTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LLEGDFAPEENSTALCLAVLVHA*FMSFLP
Trigger: TGGCAGGAAGCTCATGAACCAGGCATGGACCAGGAC...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAACAGGAGCTGGCATTaGATTTTTGTCCTGGTCCAT +
Preference number: 2 (lower is better)
Translates to: QVDFWVSEHHFWREISLLNRSWH*IFVLVH
Trigger: ATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTT...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp CTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCAAACCTCGCTTaGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCCTA +
Preference number: 2 (lower is better)
Translates to: LWQSGLQWWRSANLA*KKFLDFLLLDGSCL
Trigger: TAGGCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGATTGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCAAGAGATGGCAAGCTTaGGCCAGGAGACATAATATT +
Preference number: 2 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICKRWQA*ARRHNI
Trigger: AATATTATGTCTCCTGGCTCAAGCTTGCCATCTCTT...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCAGAGGTATGAATGGCTaGCACTTCTTCCATGACTTT +
Preference number: 2 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICRGMNG*HFFHDF
Trigger: AAAGTCATGGAAGAAGTGTCAGCCATTCATACCTCT...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGGCAGTGGTGGAGATCTaGAAACCTCGCTTTGAAGAA +
Preference number: 2 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGAVVEI*KPRFEE
Trigger: TTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGC...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCACCCGAGCCTCTTTACTaGCCCGGGAATTTCCCAACA +
Preference number: 2 (lower is better)
Translates to: RMESESDEACLDKHAAAAPEPLY*PGNFPT
Trigger: TGTTGGGAAATTCCCGGGGCAGTAAAGAGGCTCGGG...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp TGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTaGCTGGATGGTAGTTGCCTAGACCAATTCCGCGTTCTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: WRSANLALKKFLDFL*LDGSCLDQFRVLSP
Trigger: TGGAGAGAGAACGCGGAATTGGTCTAGGCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CAA 90 bp CGAGCCTCTTTACTGCCCCGGGAATTTCCCAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGCTGGATGAGGAGAGGAAGACATCCA +
Preference number: 2 (lower is better)
Translates to: RASLLPREFPNNTES*SLPCKSWMRRGRHP
Trigger: TGGATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTCCCGGGGCAGTAAAGAGGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACTTTTGTTTCCTAACATaGAGAGATGGCAAGCTTGAG +
Preference number: 2 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADFCFLT*RDGKLE
Trigger: CTCAAGCTTGCCATCTCTTCATGTTAGGAAACAAAA...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGGTTTCTGATAAGTGCTaGGCATCTAATTCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: QVDFWVSEHHFWREISLLVSDKC*ASNSAS
Trigger: AGAAGCAGAATTAGATGCTCAGCACTTATCAGAAAC...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCGTTTCTGATAAGTGCTaGGCATCTAATTCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICVSDKC*ASNSAS
Trigger: AGAAGCAGAATTAGATGCTCAGCACTTATCAGAAAC...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGCTGCAAACCTCGCTTTaGAGAAGTTCCTGGATTTTC +
Preference number: 2 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGLQTSL*RSSWIF
Trigger: GAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAG...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCCCATCTTTCATTCTGTaGAGGACTTTGCCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVPSFIL*RTLPSR
Trigger: TCTGGAAGGCAAAGTCCTTCACAGAATGAAAGATGG...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGCGTATTCTCACTGCTTaGAGACATATGTTCGGTTTT +
Preference number: 2 (lower is better)
Translates to: QVDFWVSEHHFWREISLLRILTA*RHMFGF
Trigger: AAAACCGAACATATGTCTTCAAGCAGTGAGAATACG...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGGCTTCCTGTGTCGTCTaGTTACATCCTATTTCATCT +
Preference number: 2 (lower is better)
Translates to: VDFWVSEHHFWREISLLKASCVV*LHPISS
Trigger: AGATGAAATAGGATGTAATCAGACGACACAGGAAGC...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACTTCTCTCTTAGGATTTaGCTGTGGTCCTCATTTGTA +
Preference number: 2 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADFSLRI*LWSSFV
Trigger: TACAAATGAGGACCACAGGCAAATCCTAAGAGAGAA...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACTCTGGGCTGCAGTGGTaGAGATCTGCAAACCTCGCT +
Preference number: 2 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDSGLQW*RSANLA
Trigger: AGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGA...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp ATCTGGAAGAACCTGGACCCTCTGAACTGCAGCATTTACTGCAGCTaGCTTAGGTCCACTCTCTCTCTTTTCAGCAGTAGGTGCTTTATT +
Preference number: 2 (lower is better)
Translates to: IWKNLDPLNCSIYCS*LRSTLSLFSSRCFI
Trigger: AATAAAGCACCTACTGCTGAAAAGAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCTTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGGAAATTGTAAGTGTTTaGATGTGTATGGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: VDFWVSEHHFWREISLLKEIVSV*MCMGSR
Trigger: TCTGCTGCCCATACACATTCAAACACTTACAATTTC...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACCTGCATGGTTCACTCTaGACGGAGCTGGCAATCGAA +
Preference number: 2 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDLHGSL*TELAIE
Trigger: TTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAG...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTGATTTGGTTCTAGGGTaGTGTGACACTGCTGGAACT +
Preference number: 2 (lower is better)
Translates to: LLEGDFAPEENSTALCLADLVLG*CDTAGT
Trigger: AGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATC...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCCTTAGGATTTGCCTGTaGTCCTCATTTGTAGCTATC +
Preference number: 2 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVLRICL*SSFVAI
Trigger: GATAGCTACAAATGAGGACCACAGGCAAATCCTAAG...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTGTCCAAAATGTGGTTaGAACTTGAGGTGTTTATCA +
Preference number: 2 (lower is better)
Translates to: QVDFWVSEHHFWREISLLCPKCG*NLRCLS
Trigger: TGATAAACACCTCAAGTTCCAACCACATTTTGGACA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATCTGAGCACCACTTTTaGAGGGAGATTTCGCTCCTG +
Preference number: 2 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSSEHHF*REISLL
Trigger: CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCAGTGCTGCACTGGCCCTaGCCCGAGCCTCTTTACTGC +
Preference number: 2 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSVLHWP*PEPLYC
Trigger: GCAGTAAAGAGGCTCGGGCCAGGGCCAGTGCAGCAC...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCATTCTGCTTGGTGGCATaGTTTGTCCAGGGCTATCTG +
Preference number: 2 (lower is better)
Translates to: RMESESDEACLDKHAAAAFCLVA*FVQGYL
Trigger: CAGATAGCCCTGGACAAACCATGCCACCAAGCAGAA...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp CATCCCTTTAGATGTGCTCTGGATCCTTTCTCTCTCCATTTCTCTTaGATCTTAGGGATCTTCAACTCTCTTCTCTACTGGCTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: HPFRCALDPFSLHFS*ILGIFNSLLYWLLP
Trigger: GGGAAGGAGCCAGTAGAGAAGAGAGTTGAAGATCCCTAAGATCAAAGAGAAATGGAGAGAGAAAGGATCCAGAGCACATCTAAAGGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp TCTTTACTGCCCCGGGAATTTCCCAACAATACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATGAGGAGAGGAAGACATCCAGACTGT +
Preference number: 2 (lower is better)
Translates to: SLLPREFPNNTESLS*PCKSWMRRGRHPDC
Trigger: ACAGTCTGGATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTCCCGGGGCAGTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp GACTTGTACTTGAGGAGCTATTTCGAACTCCTGGAATATGAATCATaGTCCTGCCTCGAGAGATTGAAGGCATGTTTGCTTGAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: DLYLRSYFELLEYES*SCLERLKACLLEGA
Trigger: AGCCCCTTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGGACAATGATTCATATTCCAGGAGTTCGAAATAGCTCCTCAAGTACAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTCCATCTTTCATTCTGTaGAGGACTTTGCCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: LLEGDFAPEENSTALCLAPSFIL*RTLPSR
Trigger: TCTGGAAGGCAAAGTCCTTCACAGAATGAAAGATGG...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTTCATCAGGCTGTGAGTaGATGATGTTGTGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: LLSKMWLELEVFIISALSSSGCE*MMLWSA
Trigger: AGCACTCCACAACATCATTCACTCACAGCCTGATGA...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCAAGCACTCAGGCTGGATaGACAAGAAAATCCATCTGG +
Preference number: 2 (lower is better)
Translates to: RMESESDEACLDKHAAAASTQAG*TRKSIW
Trigger: CCAGATGGATTTTCTTGTTCATCCAGCCTGAGTGCT...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGAACCAAAAATGCAAGTaGACCATCTACAGCACATAT +
Preference number: 2 (lower is better)
Translates to: VDFWVSEHHFWREISLLKNQKCK*TIYSTY
Trigger: ATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTT...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCTTCTCTCTTAGGATTTaGCTGTGGTCCTCATTTGTA +
Preference number: 2 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVFSLRI*LWSSFV
Trigger: TACAAATGAGGACCACAGGCAAATCCTAAGAGAGAA...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCAGAGCTTCTTCTAAGTaGATTTCTCTCATCTGTCAC +
Preference number: 2 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVRASSK*ISLICH
Trigger: GTGACAGATGAGAGAAATGCACTTAGAAGAAGCTCT...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTGATTTGGTTCTAGGGTaGTGTGACACTGCTGGAACT +
Preference number: 2 (lower is better)
Translates to: LLSKMWLELEVFIISALSDLVLG*CDTAGT
Trigger: AGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATC...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACTTTACTATTTACATCTaGTCGCCAAGACAAATTCCT +
Preference number: 2 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADFTIYI*SPRQIP
Trigger: AGGAATTTGTCTTGGCGAGCAGATGTAAATAGTAAA...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCACTTTTCATCAGTTGCTaGCCCTCTGTCTGGTATGTC +
Preference number: 2 (lower is better)
Translates to: RMESESDEACLDKHAAAALFISC*PSVWYV
Trigger: GACATACCAGACAGAGGGGCAGCAACTGATGAAAAG...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATGCACTATGTATTTTATaGGCTAGGTCGGCTGGGTAT +
Preference number: 2 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHALCIL*ARSAGY
Trigger: ATACCCAGCCGACCTAGCCCATAAAATACATAGTGC...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAACTCTGTGCAGAACTTaGATGGAGCTGATTCTGCCT +
Preference number: 2 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSTLCRT*MELILP
Trigger: AGGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGT...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCATTGTCCAGGGCTATCTaGAAGATCACTGGGGCTTAT +
Preference number: 2 (lower is better)
Translates to: RMESESDEACLDKHAAAALSRAI*KITGAY
Trigger: ATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAA...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTATTATACTTCACTGCTaGGATCTTGCCCTAACATAC +
Preference number: 2 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPIILHC*DLALTY
Trigger: GTATGTTAGGGCAAGATCTCAGCAGTGAAGTATAAT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCACTCTGCTTACTACGATaGGATGCCTTGGGACTTAAA +
Preference number: 2 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSLCLLR*DALGLK
Trigger: TTTAAGTCCCAAGGCATCTCATCGTAGTAAGCAGAG...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCCTGACACTTCTTCCATaGCTTTGGCAATCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: GISRICFLCRLITSYFIFLTLLP*LWQSGL
Trigger: CAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAG...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAACCTTGGTTCCCAGATaGCTTGTCAGCCTTCGAGGT +
Preference number: 2 (lower is better)
Translates to: PVSSDYILFHLQLMTKMITLVPR*LVSLRG
Trigger: ACCTCGAAGGCTGACAAGTCATCTGGGAACCAAGGT...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAACAGCAGGACAGATCTaGTGTTCAACAGGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: PVSSDYILFHLQLMTKMITAGQI*CSTGAG
Trigger: GCCAGCTCCTGTTGAACATCAGATCTGTCCTGCTGT...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACAGCAGTACTAGGGGATaGTGTCCTTGGAAGTTGAGA +
Preference number: 2 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDSSTRG*CPWKLR
Trigger: TCTCAACTTCCAAGGACATCATCCCCTAGTACTGCT...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGCCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 2 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATCCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 2 (lower is better)
Translates to: GALLDPPIWDVCLATGLNPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGGGTGTTTATCATCAGTaGTCTCAGTATAAACAGGAT +
Preference number: 2 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGGVYHQ*SQYKQD
Trigger: ATCCTGTTTATACTGAGAGCACTGATGATAAACACC...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTGGTATTAGCAGAATCTaGTTCCTGTGTCGTCTGATT +
Preference number: 2 (lower is better)
Translates to: LLEGDFAPEENSTALCLAGISRI*FLCRLI
Trigger: AATCAGACGACACAGGAAGCAGATTCTGCTAATACC...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACCACTTACCATTCCACTaGATGGTTCACTCTGAACGG +
Preference number: 2 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDHLPFH*MVHSER
Trigger: CCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTG...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGGCATTTACTGCAGCTTaGTTAGGTCCACTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: HSCNRSSSESILRELRELAFTAA*LGPLSL
Trigger: GAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGC...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCACTGATTTTTGTTGGGTaGAGAAGAAGACGCAGATGC +
Preference number: 2 (lower is better)
Translates to: RMESESDEACLDKHAAAALIFVG*RRRRRC
Trigger: GCATCTGCGTCTTCTTCTGCACCCAACAAAAATCAG...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATGCCAACGCATGGAATaGTTAAGTGGCAACAGTCTT +
Preference number: 2 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLCQRME*LSGNSL
Trigger: AAGACTGTTGCCACTTAACCATTCCATGCGTTGGCA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATGTGTTTGAATGTGTATaGGCAGCAGAGCTTCTTCTA +
Preference number: 2 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHVFECV*AAELLL
Trigger: TAGAAGAAGCTCTGCTGCCCATACACATTCAAACAC...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCATTGTTTCTGAACCATTaGCTCCCCGTGACCTGTATG +
Preference number: 2 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPLFLNH*LPVTCM
Trigger: CATACAGGTCACGGGGAGCCAATGGTTCAGAAACAA...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATACACTGGCTGTTTCATaGTCCATTCGTGTAGTTGAA +
Preference number: 2 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHTLAVS*SIRVVE
Trigger: TTCAACTACACGAATGGACCATGAAACAGCCAGTGT...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp ATTGGCTGCTTTGCAATAGCTTGTGTCTTATTAGCTGATTGTTGGTaGGAGGTTAGTTCTGTGTGGCTGGTAACTTTAGCCTCTGATTCC +
Preference number: 2 (lower is better)
Translates to: IGCFAIACVLLADCW*EVSSVWLVTLASDS
Trigger: GGAATCAGAGGCTAAAGTTACCAGCCACACAGAACTAACCTCCAACCAACAATCAGCTAATAAGACACAAGCTATTGCAAAGCAGCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCC +
Preference number: 2 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHFRISC*EIPQSS
Trigger: GGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAA...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAAAGAGATGGCAAGCTTaGGCCAGGAGACATAATATT +
Preference number: 2 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSKRWQA*ARRHNI
Trigger: AATATTATGTCTCCTGGCTCAAGCTTGCCATCTCTT...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACACTCTGCTTACTACGATaGGATGCCTTGGGACTTAAA +
Preference number: 2 (lower is better)
Translates to: FCYLQGISRICFLCRLITLCLLR*DALGLK
Trigger: TTTAAGTCCCAAGGCATCTCATCGTAGTAAGCAGAG...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAAATGTGGTTGGAACTTaGGGTGTTTATCATCAGTGC +
Preference number: 2 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSNVVGT*GVYHQC
Trigger: GCACTGATGATAAACACCTCAAGTTCCAACCACATT...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTCGTATTCTCACTGCTTaGAGACATATGTTCGGTTTT +
Preference number: 2 (lower is better)
Translates to: LLEGDFAPEENSTALCLARILTA*RHMFGF
Trigger: AAAACCGAACATATGTCTTCAAGCAGTGAGAATACG...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGGGAGATTTCGCTCCTaGAGAAAATTCAACAGCTTT +
Preference number: 2 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSGRFRS*RKFNSF
Trigger: AAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCC...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCCTTGTCATCAGGCTGTaGGTGAATGATGTTGTGGAG +
Preference number: 2 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLLVIRL*VNDVVE
Trigger: CTCCACAACATCATTCACTCACAGCCTGATGACAAG...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCATCAGTTTCATTCATaGAGTAAAGCAAAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTHQFHS*SKAKQA
Trigger: AGCCTGCTTTGCTTTACTGCATGAATGAAACTGATG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGCCTATTATGCTCAATaGTTAGTCTGTGCTAGGCTG +
Preference number: 2 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQAYYAQ*LVCARL
Trigger: CAGCCTAGCACAGACTAAGCATTGAGCATAATAGGC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR GCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACAGGAGAAACACATTCCTaGTGTCCAAAATGTGGTTGG +
Preference number: 2 (lower is better)
Translates to: FCYLQGISRICFLCRLITGETHS*CPKCGW
Trigger: CCAACCACATTTTGGACAGCAGGAATGTGTTTCTCC...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATGGACGTATTCTCACTaGTTGAAGACATATGTTCGG +
Preference number: 2 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSWTYSH*LKTYVR
Trigger: CCGAACATATGTCTTCAAGCAGTGAGAATACGTCCA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTGCCAACGCATGGAATaGTTAAGTGGCAACAGTCTT +
Preference number: 2 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQCQRME*LSGNSL
Trigger: AAGACTGTTGCCACTTAACCATTCCATGCGTTGGCA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CCA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCTTGTTTCTGAACCATTaGCTCCCCGTGACCTGTATG +
Preference number: 2 (lower is better)
Translates to: GISRICFLCRLITSYFIFLFLNH*LPVTCM
Trigger: CATACAGGTCACGGGGAGCCAATGGTTCAGAAACAA...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCAAAGAAACTTTGCAAGTaGCAGCCTTTTGAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPKKLCK*QPFEAD
Trigger: GTCAGCCTCAAAAGGCTGCCACTTGCAAAGTTTCTT...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CAA 90 bp CTAGCAAAGTTCGCGACATATCATCCTTATCATGAGTACCAAGCATaGACAACAATGAATACACCATTTCCACCTTGGTTCCCAGATGAC +
Preference number: 2 (lower is better)
Translates to: LAKFATYHPYHEYQA*TTMNTPFPPWFPDD
Trigger: GTCATCTGGGAACCAAGGTGGAAATGGTGTATTCATTGTTGTCAATGCTTGGTACTCATGATAAGGATGATATGTCGCGAACTTTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTGGAACCATATTACTGTaGATTTCACAGCCACATGAT +
Preference number: 2 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCGTILL*ISQPHD
Trigger: ATCATGTGGCTGTGAAATTCACAGTAATATGGTTCC...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAAGTATTCAAATATGGTaGAAGGACAGTCATGTTGCC +
Preference number: 2 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSSIQIW*KDSHVA
Trigger: GGCAACATGACTGTCCTTTCACCATATTTGAATACT...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTGAAATTGTAAGTGTTTaGATGTGTATGGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LLSKMWLELEVFIISALSEIVSV*MCMGSR
Trigger: TCTGCTGCCCATACACATTCAAACACTTACAATTTC...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCAAATGTGGTTGGAACTTaGGGTGTTTATCATCAGTGC +
Preference number: 2 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPNVVGT*GVYHQC
Trigger: GCACTGATGATAAACACCTCAAGTTCCAACCACATT...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAGAACTTGGATGGAGCTaGTTCTGCCTCTTGGCATTA +
Preference number: 2 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIELGWS*FCLLAL
Trigger: TAATGCCAAGAGGCAGAATCAGCTCCATCCAAGTTC...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACGGGAGATTTCGCTCCTaGAGAAAATTCAACAGCTTT +
Preference number: 2 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDGRFRS*RKFNSF
Trigger: AAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCC...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTATGTGGGCCTATTATaGTCAATGCTTAGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQYVGLL*SMLSLC
Trigger: GCACAGACTAAGCATTGAGCATAATAGGCCCACATA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR GCA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCAGTGCCAACCAAAAATaGAAGTGCACCATCTACAGC +
Preference number: 2 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLSANQK*KCTIYS
Trigger: GCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACT...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATGGTGTTTATCATCAGTaGTCTCAGTATAAACAGGAT +
Preference number: 2 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHGVYHQ*SQYKQD
Trigger: ATCCTGTTTATACTGAGAGCACTGATGATAAACACC...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGGAACCATATTACTGTaGATTTCACAGCCACATGAT +
Preference number: 2 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQGTILL*ISQPHD
Trigger: ATCATGTGGCTGTGAAATTCACAGTAATATGGTTCC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR TCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTTTCCACATGCATTACTaGCTATTGTCAAACTATGAG +
Preference number: 2 (lower is better)
Translates to: LLSKMWLELEVFIISALSFHMHY*LLSNYE
Trigger: CTCATAGTTTGACAATAGTCAGTAATGCATGTGGAA...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACAGTATTCAAATATGGTaGAAGGACAGTCATGTTGCC +
Preference number: 2 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDSIQIW*KDSHVA
Trigger: GGCAACATGACTGTCCTTTCACCATATTTGAATACT...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTAAGAGGTATGAATGGCTaGCACTTCTTCCATGACTTT +
Preference number: 2 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLRGMNG*HFFHDF
Trigger: AAAGTCATGGAAGAAGTGTCAGCCATTCATACCTCT...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCTAGGCTGCTTGCATTaGTATTACATGAATTTACTT +
Preference number: 2 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLGCLH*YYMNLL
Trigger: AAGTAAATTCATGTAATAGCAATGCAAGCAGCCTAG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR GCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACATGTCAGCCTTCGAGGTaGAGAGTGTGTGCTACTAGA +
Preference number: 2 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTCQPSR*RVCATR
Trigger: TCTAGTAGCACACACTCTGCACCTCGAAGGCTGACA...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGAACACTCGCAATAACCTaGTGTAAGTCTTCACTTTCA +
Preference number: 2 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRTLAIT*CKSSLS
Trigger: TGAAAGTGAAGACTTACAGCAGGTTATTGCGAGTGT...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGCAGCTTTATTCTCAGTaGAATGTGCTGACAAATTCC +
Preference number: 2 (lower is better)
Translates to: HSCNRSSSESILRELRELQLYSQ*NVLTNS
Trigger: GGAATTTGTCAGCACATTGCACTGAGAATAAAGCTG...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAAAGAGGAAATTATGTaGGCCTATTATGCTCAATGC +
Preference number: 2 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCKEEIM*AYYAQC
Trigger: GCATTGAGCATAATAGGCCCACATAATTTCCTCTTT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CCA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCGTGTTTGAATGTGTATaGGCAGCAGAGCTTCTTCTA +
Preference number: 2 (lower is better)
Translates to: GISRICFLCRLITSYFIFVFECV*AAELLL
Trigger: TAGAAGAAGCTCTGCTGCCCATACACATTCAAACAC...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GATTGGAATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: DWNYLLALVEDLSSPSSVTCFNN*SYEAAA
Trigger: GGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGT...CACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
3UTR-3UTR TCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTTGTTTCCTAACATaGAGAGATGGCAAGCTTGAG +
Preference number: 2 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLFCFLT*RDGKLE
Trigger: CTCAAGCTTGCCATCTCTTCATGTTAGGAAACAAAA...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATGTACTTTGATTCCTTaGTTGTCTTTGCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: FCYLQGISRICFLCRLITCTLIP*LSLLTL
Trigger: CAAAGTGAGCAAAGACAATCAAGGAATCAAAGTACA...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGATATCATCCTTATCATaGGTACCAAGCATTGACAAC +
Preference number: 2 (lower is better)
Translates to: HSCNRSSSESILRELRELISSLS*VPSIDN
Trigger: GTTGTCAATGCTTGGTACTCATGATAAGGATGATAT...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCAAACCAAAAATGCAAGTaGACCATCTACAGCACATAT +
Preference number: 2 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPNQKCK*TIYSTY
Trigger: ATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTT...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACATTGCTGGATGGTAGTTaGCTAGACCAATTCCGCGTT +
Preference number: 2 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTLLDGS*LDQFRV
Trigger: AACGCGGAATTGGTCTAGGCAACTACCATCCAGCAA...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACAGCAGTGGTGGAGATCTaGAAACCTCGCTTTGAAGAA +
Preference number: 2 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTAVVEI*KPRFEE
Trigger: TTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGC...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACAGAGCTTCTTCTAAGTaGATTTCTCTCATCTGTCAC +
Preference number: 2 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNRASSK*ISLICH
Trigger: GTGACAGATGAGAGAAATGCACTTAGAAGAAGCTCT...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR GCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACATTTTGTCCTGGTCCATaGCTGGTTCATGAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTFCPGP*LVHELP
Trigger: AGGAAGCTCATGAACCAGGCATGGACCAGGACAAAA...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCAAATATCACCTTCCTCTaGTTTATTGTCATCCAATTC +
Preference number: 2 (lower is better)
Translates to: RMESESDEACLDKHAAAANITFL*FIVIQF
Trigger: GAATTGGATGACAATAAAGCAGAGGAAGGTGATATT...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTTACGATGAGATGCCTTaGGACTTAAATTGTCTATAT +
Preference number: 2 (lower is better)
Translates to: LLSKMWLELEVFIISALSYDEMP*DLNCLY
Trigger: ATATAGACAATTTAAGTCCCAAGGCATCTCATCGTA...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACAATCCAGACTGTCGCATaGATATACAGCTGTCTTGGG +
Preference number: 2 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTIQTVA*IYSCLG
Trigger: CCCAAGACAGCTGTATATCCATGCGACAGTCTGGAT...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAATGTTCAACAGGAGCTaGCATTGGATTTTTGTCCTG +
Preference number: 2 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIMFNRS*HWIFVL
Trigger: CAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCACAAGAAAATCCATCTaGAGTACTTTCCGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLTRKSI*STFRGK
Trigger: TTTGCCACGGAAAGTACTCCAGATGGATTTTCTTGT...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCGTTGCAACAAGAAGATaGAGGGGCAAGACAGTTTAC +
Preference number: 2 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSVATRR*RGKTVY
Trigger: GTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAAC...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257430.9
3UTR-3UTR GCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACATCAGTTTCATTCATaGAGTAAAGCAAAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: YYAQCLVCARLLALLLHEHQFHS*SKAKQA
Trigger: AGCCTGCTTTGCTTTACTGCATGAATGAAACTGATG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCTAGGCTGCTTGCATTaGTATTACATGAATTTACTT +
Preference number: 2 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLGCLH*YYMNLL
Trigger: AAGTAAATTCATGTAATAGCAATGCAAGCAGCCTAG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR GCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACACTTCCAGAGTTCAACTaGTCATCTGAATATTTAAGA +
Preference number: 2 (lower is better)
Translates to: FCYLQGISRICFLCRLITLPEFN*SSEYLR
Trigger: TCTTAAATATTCAGATGAGCAGTTGAACTCTGGAAG...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACTACGATGAGATGCCTTaGGACTTAAATTGTCTATAT +
Preference number: 2 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDYDEMP*DLNCLY
Trigger: ATATAGACAATTTAAGTCCCAAGGCATCTCATCGTA...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCTGTCCAAAATGTGGTTaGAACTTGAGGTGTTTATCA +
Preference number: 2 (lower is better)
Translates to: GISRICFLCRLITSYFIFCPKCG*NLRCLS
Trigger: TGATAAACACCTCAAGTTCCAACCACATTTTGGACA...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACAGATATACAGCTGTCTTaGGAGCTAGACATAGCTAGC +
Preference number: 2 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTDIQLS*ELDIAS
Trigger: GCTAGCTATGTCTAGCTCCCAAGACAGCTGTATATC...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCGCAATAATTCTGCAATaGCCTGTAGTCCCCCTAGTT +
Preference number: 2 (lower is better)
Translates to: RLAYILINSMIRTHSICFAIILQ*PVVPLV
Trigger: AACTAGGGGGACTACAGGCCATTGCAGAATTATTGC...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGTATACTATCAAATATaGCTTCCAGAACAAAAACCC +
Preference number: 2 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFVYYQI*LPEQKP
Trigger: GGGTTTTTGTTCTGGAAGCCATATTTGATAGTATAC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CCA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCCTTAGGATTTGCCTGTaGTCCTCATTTGTAGCTATC +
Preference number: 2 (lower is better)
Translates to: RLAYILINSMIRTHSICFLRICL*SSFVAI
Trigger: GATAGCTACAAATGAGGACCACAGGCAAATCCTAAG...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATACTTCTATTATGTGTTTaGGTCTTGCCCATCTTTCAT +
Preference number: 2 (lower is better)
Translates to: PVSSDYILFHLQLMTKMILLLCV*VLPIFH
Trigger: ATGAAAGATGGGCAAGACCCAAACACATAATAGAAG...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACACTTTCAGATTTTAGTTaGGCCACAAGTGCTCTCATG +
Preference number: 2 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTLSDFS*ATSALM
Trigger: CATGAGAGCACTTGTGGCCCAACTAAAATCTGAAAG...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp CTGGGTAACACTGTAGTATTCAAATATGGTGAAAGGACAGTCATGTaGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTG +
Preference number: 2 (lower is better)
Translates to: LGNTVVFKYGERTVM*PVLKLSDLLSSCRL
Trigger: CAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACATGACTGTCCTTTCACCATATTTGAATACTACAGTGTTACCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CAA 90 bp GGGCTCAGTCTCTTTGATAGGTTCATTTTCTTTATTGTTGTTTTCTaGGTCAATGTCACTGAGAGAACTCAGAGAGGAATTATGAGAAAA +
Preference number: 2 (lower is better)
Translates to: GLSLFDRFIFFIVVF*VNVTERTQRGIMRK
Trigger: TTTTCTCATAATTCCTCTCTGAGTTCTCTCAGTGACATTGACCAAGAAAACAACAATAAAGAAAATGAACCTATCAAAGAGACTGAGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR GCA 90 bp AAGAAAATCCATCTGGAGTACTTTCCGTGGCAAAATGTAATAAAGTATCAGCATAATTCAACAGCTTTGTaGCTGGCTGATTCTGAAGAT +
Preference number: 2 (lower is better)
Translates to: KKIHLEYFPWQNVIKYQHNSTAL*LADSED
Trigger: ATCTTCAGAATCAGCCAGGCACAAAGCTGTTGAATT...ATGCTGATACTTTATTACATTTTGCCACGGAAAGTACTCCAGATGGATTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 90 bp AAAACATATTGGAGTATCTTCTACACAATAAGTCTGTATTGTTTCTaGGTTAATAGAAGAAACTTTGCAAGTGGCAGCCTTTTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KTYWSIFYTISLYCF*VNRRNFASGSLLRL
Trigger: CAGCCTCAAAAGGCTGCCACTTGCAAAGTTTCTTCTATTAACCAAGAAACAATACAGACTTATTGTGTAGAAGATACTCCAATATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR TCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACATTCCACATGCATTACTaGCTATTGTCAAACTATGAG +
Preference number: 2 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTFHMHY*LLSNYE
Trigger: CTCATAGTTTGACAATAGTCAGTAATGCATGTGGAA...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGTATACTATCAAATATaGCTTCCAGAACAAAAACCC +
Preference number: 2 (lower is better)
Translates to: HNSCLINKRAAISPQIPEVYYQI*LPEQKP
Trigger: GGGTTTTTGTTCTGGAAGCCATATTTGATAGTATAC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR GCA 72 bp CAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATaGCTGGTTCATGAGCTTCCTGCCACTCCCAACAGG +
Preference number: 3 (lower is better)
Translates to: QQELALDFCPGP*LVHELPATPNR
Trigger: CCTGTTGGGAGTGGCAGGAAGCTCATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp GAGGTGGTGGAGGTGTTTTACTTCTGCTTGGTGGCATaGTTTGTCCAGGGCTATCTGGAAGATCACTGGGGC +
Preference number: 3 (lower is better)
Translates to: EVVEVFYFCLVA*FVQGYLEDHWG
Trigger: GCCCCAGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp GATGGCTTGGCTCCTCTAGGAGAAGTGGTGGCTGTTTaGCCTTCACTAGGGCTTTTGGAGGCTGGAGTCTTA +
Preference number: 3 (lower is better)
Translates to: DGLAPLGEVVAV*PSLGLLEAGVL
Trigger: TAAGACTCCAGCCTCCAAAAGCCCTAGTGAAGGTCAAACAGCCACCACTTCTCCTAGAGGAGCCAAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 72 bp AGTGGCAGCCTTTTGAGGCTGACCACTTCTACTCTGTaGAGAACTTGGATGGAGCTGATTCTGCCTCTTGGC +
Preference number: 3 (lower is better)
Translates to: SGSLLRLTTSTL*RTWMELILPLG
Trigger: GCCAAGAGGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGTAGAAGTGGTCAGCCTCAAAAGGCTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 72 bp CTAGAACCCTGCAGTCTGCTGGATTTGGTTCTAGGGTaGTGTGACACTGCTGGAACTTCGCTCACAGGATCT +
Preference number: 3 (lower is better)
Translates to: LEPCSLLDLVLG*CDTAGTSLTGS
Trigger: AGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATCCAGCAGACTGCAGGGTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 72 bp AGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTaGTTCATGAGCTTCCTGCCACTCCCAACAGGTTTC +
Preference number: 3 (lower is better)
Translates to: RSWHWIFVLVHA*FMSFLPLPTGF
Trigger: GAAACCTGTTGGGAGTGGCAGGAAGCTCATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGACTTCTTCCATGACTTaGGCAATCTGGGCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: VDFWVSEHHFWREISLLKTSSMT*AIWAAV
Trigger: CACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGT...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 72 bp CACCTTGGTTCCCAGATGACTTGTCAGCCTTCGAGGTaGAGAGTGTGTGCTACTAGAACTCAAAACACTGGC +
Preference number: 3 (lower is better)
Translates to: HLGSQMTCQPSR*RVCATRTQNTG
Trigger: GCCAGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCATCTGGGAACCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp CGGCCAGGAGACTGTATAGGTCTACTTAATGGTTGCTaGGCAGGTCTTGAAGGGGTCGAATCTCTAGATCCT +
Preference number: 3 (lower is better)
Translates to: RPGDCIGLLNGC*AGLEGVESLDP
Trigger: AGGATCTAGAGATTCGACCCCTTCAAGACCTGCCCAGCAACCATTAAGTAGACCTATACAGTCTCCTGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGTTTGTTTCTGAACCATaGGCTCCCCGTGACCTGTAT +
Preference number: 3 (lower is better)
Translates to: VDFWVSEHHFWREISLLKFVSEP*APRDLY
Trigger: ATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATTACTTCTCGCTTGGTTaGAGCTGTTTGAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: GALLDPPIWDVCLATGLNYFSLG*SCLRRW
Trigger: CCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTA...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp CTGGGCTGCAGTGGTGGAGATCTGCAAACCTCGCTTTaGAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTA +
Preference number: 3 (lower is better)
Translates to: LGCSGGDLQTSL*RSSWIFCCWMV
Trigger: TACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR TCA 72 bp CCCAGAACTTCTGTCTTCCTGAGAGGTATGAATGGCTaGCACTTCTTCCATGACTTTGGCAATCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: PRTSVFLRGMNG*HFFHDFGNLGC
Trigger: GCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGCCATTCATACCTCTCAGGAAGACAGAAGTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR TCA 72 bp AAATGGCTCATCGAGGCTCAGAGCACTCAGGCTGGATaGACAAGAAAATCCATCTGGAGTACTTTCCGTGGC +
Preference number: 3 (lower is better)
Translates to: KWLIEAQSTQAG*TRKSIWSTFRG
Trigger: GCCACGGAAAGTACTCCAGATGGATTTTCTTGTTCATCCAGCCTGAGTGCTCTGAGCCTCGATGAGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 72 bp TGGAAGAACCTGGACCCTCTGAACTGCAGCATTTACTaGAGCTTGCTTAGGTCCACTCTCTCTCTTTTCAGC +
Preference number: 3 (lower is better)
Translates to: WKNLDPLNCSIY*SLLRSTLSLFS
Trigger: GCTGAAAAGAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 72 bp AGTATCAGCATCTGGAAGAACCTGGACCCTCTGAACTaGAGCATTTACTGCAGCTTGCTTAGGTCCACTCTC +
Preference number: 3 (lower is better)
Translates to: SISIWKNLDPLN*SIYCSLLRSTL
Trigger: GAGAGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCTTCCAGATGCTGATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp ACTGGGGCTTATAATGCCACTTACCATTCCACTGCATaGTTCACTCTGAACGGAGCTGGCAATCGAACGACT +
Preference number: 3 (lower is better)
Translates to: TGAYNATYHSTA*FTLNGAGNRTT
Trigger: AGTCGTTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTGGCATTATAAGCCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 72 bp TTGAGGAGGTGGTGGAGGTGTTTTACTTCTGCTTGGTaGCATGGTTTGTCCAGGGCTATCTGGAAGATCACT +
Preference number: 3 (lower is better)
Translates to: LRRWWRCFTSAW*HGLSRAIWKIT
Trigger: AGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp AGGTACTTCTCGCTTGGTTTGAGCTGTTTGAGGAGGTaGTGGAGGTGTTTTACTTCTGCTTGGTGGCATGGT +
Preference number: 3 (lower is better)
Translates to: RYFSLGLSCLRR*WRCFTSAWWHG
Trigger: ACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGCTGTCCAAAATGTGGTaGGAACTTGAGGTGTTTATC +
Preference number: 3 (lower is better)
Translates to: QVDFWVSEHHFWREISLLLSKMW*ELEVFI
Trigger: GATAAACACCTCAAGTTCCAACCACATTTTGGACAG...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATGCAAGTGGCAGCCTTTaGAGGCTGACCACTTCTACT +
Preference number: 3 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHASGSL*RLTTST
Trigger: AGTAGAAGTGGTCAGCCTCAAAAGGCTGCCACTTGC...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 72 bp TTTCGGCCAGGAGACTGTATAGGTCTACTTAATGGTTaGTGGGCAGGTCTTGAAGGGGTCGAATCTCTAGAT +
Preference number: 3 (lower is better)
Translates to: FRPGDCIGLLNG*WAGLEGVESLD
Trigger: ATCTAGAGATTCGACCCCTTCAAGACCTGCCCAGCAACCATTAAGTAGACCTATACAGTCTCCTGGCCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp ACTTCTGCTTGGTGGCATGGTTTGTCCAGGGCTATCTaGAAGATCACTGGGGCTTATAATGCCACTTACCAT +
Preference number: 3 (lower is better)
Translates to: TSAWWHGLSRAI*KITGAYNATYH
Trigger: ATGGTAAGTGGCATTATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp TACTTCTCGCTTGGTTTGAGCTGTTTGAGGAGGTGGTaGAGGTGTTTTACTTCTGCTTGGTGGCATGGTTTG +
Preference number: 3 (lower is better)
Translates to: YFSLGLSCLRRW*RCFTSAWWHGL
Trigger: CAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCTTCCTGGATTTTCTGTaGCTGGATGGTAGTTGCCTA +
Preference number: 3 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVFLDFL*LDGSCL
Trigger: TAGGCAACTACCATCCAGCAACAGAAAATCCAGGAA...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGTCTGCAAACCTCGCTTaGAAGAAGTTCCTGGATTTT +
Preference number: 3 (lower is better)
Translates to: VDFWVSEHHFWREISLLKSANLA*KKFLDF
Trigger: AAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGA...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTCTTCTATTATGTGTTaGGGTCTTGCCCATCTTTCA +
Preference number: 3 (lower is better)
Translates to: QVDFWVSEHHFWREISLLSSIMC*GLAHLS
Trigger: TGAAAGATGGGCAAGACCCAAACACATAATAGAAGA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCACGTATTCTCACTGCTaGAAGACATATGTTCGGTTT +
Preference number: 3 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICTYSHC*KTYVRF
Trigger: AAACCGAACATATGTCTTCAAGCAGTGAGAATACGT...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCAGCAAGTGGCAGCCTTTaGAGGCTGACCACTTCTACT +
Preference number: 3 (lower is better)
Translates to: RMESESDEACLDKHAAAAASGSL*RLTTST
Trigger: AGTAGAAGTGGTCAGCCTCAAAAGGCTGCCACTTGC...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGGAAAATTCAACAGCTTaGTGCCTGGCTGATTCTGAA +
Preference number: 3 (lower is better)
Translates to: VDFWVSEHHFWREISLLKENSTA*CLADSE
Trigger: TTCAGAATCAGCCAGGCACAAAGCTGTTGAATTTTC...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGATGGTTCCCAGATGACTaGTCAGCCTTCGAGGTGCAG +
Preference number: 3 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRWFPDD*SAFEVQ
Trigger: CTGCACCTCGAAGGCTGACAAGTCATCTGGGAACCA...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTGCTGGCATTGGATTTTaGTCCTGGTCCATGCCTGGT +
Preference number: 3 (lower is better)
Translates to: LLSKMWLELEVFIISALSAGIGF*SWSMPG
Trigger: ACCAGGCATGGACCAGGACAAAAATCCAATGCCAGC...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGCAGGCTGGGTAAACTaGTTCATCGGGAACCATATT +
Preference number: 3 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQAGWVN*FIGNHI
Trigger: AATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CAA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACAAAGTTTGTAGACAGTaGTTCTCTCTTAGGATTTGC +
Preference number: 3 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAACTGTCTACAAACTTT...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCTTATGTGTTTGGGTCTaGCCCATCTTTCATTCTGTG +
Preference number: 3 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVLCVWV*PIFHSV
Trigger: CACAGAATGAAAGATGGGCAAGACCCAAACACATAA...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGTTATGTGTTTGGGTCTaGCCCATCTTTCATTCTGTG +
Preference number: 3 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGLCVWV*PIFHSV
Trigger: CACAGAATGAAAGATGGGCAAGACCCAAACACATAA...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGCTGTCCAAAATGTGGTaGGAACTTGAGGTGTTTATC +
Preference number: 3 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGLSKMW*ELEVFI
Trigger: GATAAACACCTCAAGTTCCAACCACATTTTGGACAG...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATG +
Preference number: 3 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGTESLS*PCKSWM
Trigger: CATCCAGCTTTTACATGGCAATGACAAAGACTCTGT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCCTCCAAAAGTCAAGTTaGTCAAAGCCATTCCAGCAT +
Preference number: 3 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVLQKSS*SKPFQH
Trigger: ATGCTGGAATGGCTTTGACAAACTTGACTTTTGGAG...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 72 bp TTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTaGTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTA +
Preference number: 3 (lower is better)
Translates to: LAPRDLYGETHS*CPKCGWNLRCL
Trigger: TAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 72 bp AGACATCCAGACTGTCGCATGGATATACAGCTGTCTTaGGAGCTAGACATAGCTAGCAAAGTTCGCGACATA +
Preference number: 3 (lower is better)
Translates to: RHPDCRMDIQLS*ELDIASKVRDI
Trigger: TATGTCGCGAACTTTGCTAGCTATGTCTAGCTCCCAAGACAGCTGTATATCCATGCGACAGTCTGGATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp TTTTTGTTGGGTGCAGAAGAAGACGCAGATGCTTGCTaGACCTGGTCCATTATCTTTTTCACACGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: FLLGAEEDADAC*TWSIIFFTRKG
Trigger: GCCTTTCCGTGTGAAAAAGATAATGGACCAGGTCCAGCAAGCATCTGCGTCTTCTTCTGCACCCAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp GTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTaGCAACAGGGCTTAATTCTGATTTCACAGATGGCT +
Preference number: 3 (lower is better)
Translates to: VLYLTHLFGMSA*QQGLILISQMA
Trigger: AGCCATCTGTGAAATCAGAATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp CCTGATCTAGAAGGTGCTTTACTTGACCCACCTATTTaGGATGTCTGCCTGGCAACAGGGCTTAATTCTGAT +
Preference number: 3 (lower is better)
Translates to: PDLEGALLDPPI*DVCLATGLNSD
Trigger: ATCAGAATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACCTTCTAGATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATCCAGGAGACATAATATaGGCATCCTTGTACTTCGCA +
Preference number: 3 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHPGDII*ASLYFA
Trigger: TGCGAAGTACAAGGATGCCAATATTATGTCTCCTGG...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp TTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCATCACCATAGAGACTTaGCTTGTGTCTCTGCTTACT +
Preference number: 3 (lower is better)
Translates to: FVSEPLAPRDLYGETHSCITIET*LVSLLT
Trigger: AGTAAGCAGAGACACAAGCAAAGTCTCTATGGTGAT...GCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCTATCTAAGCTTCCTCTaGATGAAGAGGAGCTGGGTA +
Preference number: 3 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCYLSFL*MKRSWV
Trigger: TACCCAGCTCCTCTTCATCAAGAGGAAGCTTAGATA...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCAACTTCTTCCATGACTTaGGCAATCTGGGCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPTSSMT*AIWAAV
Trigger: CACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGT...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAAATGTGGTTGGAACTaGAGGTGTTTATCATCAGTG +
Preference number: 3 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGKCGWN*RCLSSV
Trigger: CACTGATGATAAACACCTCAAGTTCCAACCACATTT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGTACTCTGTGCAGAACTaGGATGGAGCTGATTCTGCC +
Preference number: 3 (lower is better)
Translates to: HSCNRSSSESILRELRELYSVQN*DGADSA
Trigger: GGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGTA...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp ATAATGCCACTTACCATTCCACTGCATGGTTCACTCTaGACGGAGCTGGCAATCGAACGACTCTCAAAACTA +
Preference number: 3 (lower is better)
Translates to: IMPLTIPLHGSL*TELAIERLSKL
Trigger: TAGTTTTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTGGCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR TCA 72 bp CAAAACACTGGCTGTTTCATGGTCCATTCGTGTAGTTaGACCCTGCGTATATATCCATCGCCACCTTTTGCT +
Preference number: 3 (lower is better)
Translates to: QNTGCFMVHSCS*TLRIYPSPPFA
Trigger: AGCAAAAGGTGGCGATGGATATATACGCAGGGTTCAACTACACGAATGGACCATGAAACAGCCAGTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp AATAAAGTATCAGCATCTGGAAGAACCTGGACCCTCTaGACTGCAGCATTTACTGCAGCTTGCTTAGGTCCA +
Preference number: 3 (lower is better)
Translates to: NKVSASGRTWTL*TAAFTAACLGP
Trigger: TGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCTTCCAGATGCTGATACTTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 72 bp AAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTaGCTAGACCAATTCCGCGTTCTCTCTCCAAACTTC +
Preference number: 3 (lower is better)
Translates to: KKFLDFLLLDGS*LDQFRVLSPNF
Trigger: GAAGTTTGGAGAGAGAACGCGGAATTGGTCTAGGCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 72 bp GAAGGTGCTTTACTTGACCCACCTATTTGGGATGTCTaGCTGGCAACAGGGCTTAATTCTGATTTCACAGAT +
Preference number: 3 (lower is better)
Translates to: EGALLDPPIWDV*LATGLNSDFTD
Trigger: ATCTGTGAAATCAGAATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp TTACCATTCCACTGCATGGTTCACTCTGAACGGAGCTaGCAATCGAACGACTCTCAAAACTATCAAGTGAAC +
Preference number: 3 (lower is better)
Translates to: LPFHCMVHSERS*QSNDSQNYQVN
Trigger: GTTCACTTGATAGTTTTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGCATGAGTACCAAGCATaGACAACAATGAATACACCA +
Preference number: 3 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMHEYQA*TTMNTP
Trigger: TGGTGTATTCATTGTTGTCAATGCTTGGTACTCATG...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACATGCTTGAGGTTTACTaGGTTCTCCCTGTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDMLEVY*VLPVSQ
Trigger: CTGACTCACAGGGAGAACCAAGTAAACCTCAAGCAT...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp AAAGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATaGAGGGGCAAGACAGTTTACACTGTAAAGCCTCGA +
Preference number: 3 (lower is better)
Translates to: KVFMSDPVATRR*RGKTVYTVKPR
Trigger: TCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR TCA 72 bp CTGTTTTGTGATGGTAGAAGTTTGTACACAGGCAGCTaGCTTGGTTTCCTTGCCACAGGTGGAGGTAATTTT +
Preference number: 3 (lower is better)
Translates to: LFCDGRSLYTGS*LGFLATGGGNF
Trigger: AAAATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTGTACAAACTTCTACCATCACAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp CTTGTACTTGAGGAGCTATTTCGAACTCCTGGAATATaGATCATTGTCCTGCCTCGAGAGATTGAAGGCATG +
Preference number: 3 (lower is better)
Translates to: LVLEELFRTPGI*IIVLPREIEGM
Trigger: CATGCCTTCAATCTCTCGAGGCAGGACAATGATTCATATTCCAGGAGTTCGAAATAGCTCCTCAAGTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 72 bp TGTCTGGCTCCGGTAAGTAAGAGTGCCAACCAAAAATaGAAGTGCACCATCTACAGCACATATATCAGCTTT +
Preference number: 3 (lower is better)
Translates to: CLAPVSKSANQK*KCTIYSTYISF
Trigger: AAAGCTGATATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACTCTTACTTACCGGAGCCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 72 bp GGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTaGCTGGCTGATTCTGAAGATAAACTAGAACCCTGC +
Preference number: 3 (lower is better)
Translates to: GDFAPEENSTAL*LADSEDKLEPC
Trigger: GCAGGGTTCTAGTTTATCTTCAGAATCAGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR GCA 72 bp AGCTATTTCGAACTCCTGGAATATGAATCATTGTCCTaGCTCGAGAGATTGAAGGCATGTTTGCTTGAAGGG +
Preference number: 3 (lower is better)
Translates to: SYFELLEYESLS*LERLKACLLEG
Trigger: CCCTTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGGACAATGATTCATATTCCAGGAGTTCGAAATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp CCTGTATGGAGAAACACATTCCTGCTGTCCAAAATGTaGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTC +
Preference number: 3 (lower is better)
Translates to: PVWRNTFLLSKM*LELEVFIISAL
Trigger: GAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGAATGTGTTTCTCCATACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGCTAGGCTGCTTGCATaGCTATTACATGAATTTACT +
Preference number: 3 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHARLLA*LLHEFT
Trigger: AGTAAATTCATGTAATAGCAATGCAAGCAGCCTAGC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGCTAGGCTGCTTGCATaGCTATTACATGAATTTACT +
Preference number: 3 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTARLLA*LLHEFT
Trigger: AGTAAATTCATGTAATAGCAATGCAAGCAGCCTAGC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTCATGTCAGACCCAGTaGCAACAAGAAGATGAAGGG +
Preference number: 3 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGSCQTQ*QQEDEG
Trigger: CCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CAA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTATAATATTGGCATCCTaGTACTTCGCAGGCCTATTT +
Preference number: 3 (lower is better)
Translates to: LLEGDFAPEENSTALCLAIILAS*YFAGLF
Trigger: AAATAGGCCTGCGAAGTACAAGGATGCCAATATTAT...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTATCACCATAGAGACTTaGCTTGTGTCTCTGCTTACT +
Preference number: 3 (lower is better)
Translates to: LLSKMWLELEVFIISALSITIET*LVSLLT
Trigger: AGTAAGCAGAGACACAAGCAAAGTCTCTATGGTGAT...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGCAGCAGCTAACTCATTaGGAGGGGATTCGATTGTTA +
Preference number: 3 (lower is better)
Translates to: HSCNRSSSESILRELRELQQLTH*EGIRLL
Trigger: TAACAATCGAATCCCCTCCAAATGAGTTAGCTGCTG...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 72 bp GCTCCGGTAAGTAAGAGTGCCAACCAAAAATGCAAGTaGACCATCTACAGCACATATATCAGCTTTATTCTC +
Preference number: 3 (lower is better)
Translates to: APVSKSANQKCK*TIYSTYISFIL
Trigger: GAGAATAAAGCTGATATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACTCTTACTTACCGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp CATACATTTCACAGTCCACTTGCAATAATTCTGCAATaGCCTGTAGTCCCCCTAGTTCATTCATTGCATGTC +
Preference number: 3 (lower is better)
Translates to: HTFHSPLAIILQ*PVVPLVHSLHV
Trigger: GACATGCAATGAATGAACTAGGGGGACTACAGGCCATTGCAGAATTATTGCAAGTGGACTGTGAAATGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp ATAACCTGCTGTAAGTCTTCACTTTCAGATTTTAGTTaGGCCACAAGTGCTCTCATGCAGCCTTTCATAGAG +
Preference number: 3 (lower is better)
Translates to: ITCCKSSLSDFS*ATSALMQPFIE
Trigger: CTCTATGAAAGGCTGCATGAGAGCACTTGTGGCCCAACTAAAATCTGAAAGTGAAGACTTACAGCAGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTAAAGTTCCATGTGATTaGAATTTTCTGAGCATGGCA +
Preference number: 3 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTKVPCD*NFLSMA
Trigger: TGCCATGCTCAGAAAATTCAAATCACATGGAACTTT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CAA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCGAAAGGACAGTCATGTaGCCAGTATTAAAATTGTCT +
Preference number: 3 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCERTVM*PVLKLS
Trigger: AGACAATTTTAATACTGGCAACATGACTGTCCTTTC...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTAATCGAGGGTTTCATTaGACCTCTTTTACCATAACC +
Preference number: 3 (lower is better)
Translates to: LLSKMWLELEVFIISALSNRGFH*TSFTIT
Trigger: GGTTATGGTAAAAGAGGTCAAATGAAACCCTCGATT...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTACGTATTCTCACTGCTaGAAGACATATGTTCGGTTT +
Preference number: 3 (lower is better)
Translates to: LLSKMWLELEVFIISALSTYSHC*KTYVRF
Trigger: AAACCGAACATATGTCTTCAAGCAGTGAGAATACGT...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR TCA 72 bp TCTGAGCATGGCAAAGTGCTGATTATACTTCACTGCTaGGATCTTGCCCTAACATACAGGGTGATAAAAAGT +
Preference number: 3 (lower is better)
Translates to: SEHGKVLIILHC*DLALTYRVIKS
Trigger: ACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGAAGTATAATCAGCACTTTGCCATGCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CAA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACAATAATATTGGCATCCTaGTACTTCGCAGGCCTATTT +
Preference number: 3 (lower is better)
Translates to: FCYLQGISRICFLCRLITIILAS*YFAGLF
Trigger: AAATAGGCCTGCGAAGTACAAGGATGCCAATATTAT...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATATTCCTGGATTTTCTGTaGCTGGATGGTAGTTGCCTA +
Preference number: 3 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIFLDFL*LDGSCL
Trigger: TAGGCAACTACCATCCAGCAACAGAAAATCCAGGAA...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACAAAATGTGGTTGGAACTaGAGGTGTTTATCATCAGTG +
Preference number: 3 (lower is better)
Translates to: FCYLQGISRICFLCRLITKCGWN*RCLSSV
Trigger: CACTGATGATAAACACCTCAAGTTCCAACCACATTT...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp AAGAAAATCCATCTGGAGTACTTTCCGTGGCAAAATGTAATAAAGTATCAGCATCAACAGGAGCTGGCATaGGATTTTTGTCCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: KKIHLEYFPWQNVIKYQHQQELA*DFCPGP
Trigger: TGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTG...ATGCTGATACTTTATTACATTTTGCCACGGAAAGTACTCCAGATGGATTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCGCAGGCTGGGTAAACTaGTTCATCGGGAACCATATT +
Preference number: 3 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSAGWVN*FIGNHI
Trigger: AATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
3UTR-3UTR CAA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACGAAAGGACAGTCATGTaGCCAGTATTAAAATTGTCT +
Preference number: 3 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDERTVM*PVLKLS
Trigger: AGACAATTTTAATACTGGCAACATGACTGTCCTTTC...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCAAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGC +
Preference number: 3 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPNNTES*SLPCKS
Trigger: GCTTTTACATGGCAATGACAAAGACTCTGTATTGTT...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCCATAGCGTAGCCTTGTaGGCTACATCTCCAAAAGTC +
Preference number: 3 (lower is better)
Translates to: RLAYILINSMIRTHSICFHSVAL*ATSPKV
Trigger: GACTTTTGGAGATGTAGCCAACAAGGCTACGCTATG...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCGAGCATAGCGTAGCCTaGTTGGCTACATCTCCAAAA +
Preference number: 3 (lower is better)
Translates to: RLAYILINSMIRTHSICFEHSVA*LATSPK
Trigger: TTTTGGAGATGTAGCCAACAAGGCTACGCTATGCTC...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp TCTAATTCTGCTTCTAGGGCTTTTTGTTTCCTAACATaGAGAGATGGCAAGCTTGAGCCAGGAGACATAATA +
Preference number: 3 (lower is better)
Translates to: SNSASRAFCFLT*RDGKLEPGDII
Trigger: TATTATGTCTCCTGGCTCAAGCTTGCCATCTCTTCATGTTAGGAAACAAAAAGCCCTAGAAGCAGAATTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR TCA 72 bp AAACACATTCCTGCTGTCCAAAATGTGGTTGGAACTTaGGGTGTTTATCATCAGTGCTCTCAGTATAAACAG +
Preference number: 3 (lower is better)
Translates to: KHIPAVQNVVGT*GVYHQCSQYKQ
Trigger: CTGTTTATACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGAATGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR TCA 72 bp TGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATaGGGTTTTTCCTCCTTGAGCCTCATCTGTACTTCT +
Preference number: 3 (lower is better)
Translates to: CFIVIQFRYGYR*GFSSLSLICTS
Trigger: AGAAGTACAGATGAGGCTCAAGGAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR GCA 72 bp TCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTaGTCGCCAAGACAAATTCCTCAAAACACTCGCAAT +
Preference number: 3 (lower is better)
Translates to: SNFSQRLFTIYI*SPRQIPQNTRN
Trigger: ATTGCGAGTGTTTTGAGGAATTTGTCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCAAAGTTCCATGTGATTaGAATTTTCTGAGCATGGCA +
Preference number: 3 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGKVPCD*NFLSMA
Trigger: TGCCATGCTCAGAAAATTCAAATCACATGGAACTTT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR-3UTR CAA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACACCAGGAGACATAATATaGGCATCCTTGTACTTCGCA +
Preference number: 3 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTPGDII*ASLYFA
Trigger: TGCGAAGTACAAGGATGCCAATATTATGTCTCCTGG...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCTATCTAAGCTTCCTCTaGATGAAGAGGAGCTGGGTA +
Preference number: 3 (lower is better)
Translates to: RLAYILINSMIRTHSICFYLSFL*MKRSWV
Trigger: TACCCAGCTCCTCTTCATCAAGAGGAAGCTTAGATA...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR-3UTR CAA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATATCTTCTATTATGTGTTaGGGTCTTGCCCATCTTTCA +
Preference number: 3 (lower is better)
Translates to: PVSSDYILFHLQLMTKMISSIMC*GLAHLS
Trigger: TGAAAGATGGGCAAGACCCAAACACATAATAGAAGA...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 72 bp TTATTAGCTGATTGTTGGTTGGAGGTTAGTTCTGTGTaGCTGGTAACTTTAGCCTCTGATTCCTTATTTTCT +
Preference number: 3 (lower is better)
Translates to: LLADCWLEVSSV*LVTLASDSLFS
Trigger: AGAAAATAAGGAATCAGAGGCTAAAGTTACCAGCCACACAGAACTAACCTCCAACCAACAATCAGCTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp ATAGCTAGCAAAGTTCGCGACATATCATCCTTATCATaGGTACCAAGCATTGACAACAATGAATACACCATT +
Preference number: 3 (lower is better)
Translates to: IASKVRDISSLS*VPSIDNNEYTI
Trigger: AATGGTGTATTCATTGTTGTCAATGCTTGGTACTCATGATAAGGATGATATGTCGCGAACTTTGCTAGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR TCA 72 bp TGGTCAATGTCACTGAGAGAACTCAGAGAGGAATTATaGGAAAAGCAAACCGGAGTATTTTCAATAGCAAAA +
Preference number: 3 (lower is better)
Translates to: WSMSLRELREEL*EKQTGVFSIAK
Trigger: TTTTGCTATTGAAAATACTCCGGTTTGCTTTTCTCATAATTCCTCTCTGAGTTCTCTCAGTGACATTGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CCA 72 bp TGGATGAACAAGAAAATCCATCTGGAGTACTTTCCGTaGCAAAATGTAATAAAGTATCAGCATCTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: WMNKKIHLEYFP*QNVIKYQHLEE
Trigger: TTCTTCCAGATGCTGATACTTTATTACATTTTGCCACGGAAAGTACTCCAGATGGATTTTCTTGTTCATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR-3UTR CAA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCAAAAGTTTGTAGACAGTaGTTCTCTCTTAGGATTTGC +
Preference number: 3 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAACTGTCTACAAACTTT...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CCA 72 bp GAAATTTCAGGAATAGATAAGTGCCAACGCATGGAATaGTTAAGTGGCAACAGTCTTCTTCAATTGTTTTTA +
Preference number: 3 (lower is better)
Translates to: EISGIDKCQRME*LSGNSLLQLFL
Trigger: TAAAAACAATTGAAGAAGACTGTTGCCACTTAACCATTCCATGCGTTGGCACTTATCTATTCCTGAAATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR TCA 72 bp TTGCTGAGAGATTCCACAAAGTTCCACATGCATTACTaGCTATTGTCAAACTATGAGATTTTAAGTGTTGTA +
Preference number: 3 (lower is better)
Translates to: LLRDSTKFHMHY*LLSNYEILSVV
Trigger: TACAACACTTAAAATCTCATAGTTTGACAATAGTCAGTAATGCATGTGGAACTTTGTGGAATCTCTCAGCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACAATGATGTTGTGGAGTaGTGCACTGGCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADNDVVE*CTGPGP
Trigger: CGGGCCAGGGCCAGTGCAGCACTCCACAACATCATT...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTGCTGGACGCAGCTCCTGCTaGCGCCGGTGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LLALVEDLSSPSSVPQLAGRSSC*RRCSRT
Trigger: GGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCC...AGCAAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR TCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGGGTTCTAGGGTGCTGTaGCACTGCTGGAACTTCGCT +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLGSRVL*HCWNFA
Trigger: AGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACC...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TTGGAATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCGCCGGACGCAGCTCCTaGTGCCGCCGGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LELSSSSCRRFEFSIFSAAGRSS*CRRCSR
Trigger: CCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGC...GGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR TCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACACAGCAGGACAGATCTaGTGTTCAACAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADTAGQI*CSTGAG
Trigger: GCCAGCTCCTGTTGAACATCAGATCTGTCCTGCTGT...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCCTGCATGGTTCACTCTaGACGGAGCTGGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICLHGSL*TELAIE
Trigger: TTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAG...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGTGCTGCACTGGCCCTaGCCCGAGCCTCTTTACTGC +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQVLHWP*PEPLYC
Trigger: GCAGTAAAGAGGCTCGGGCCAGGGCCAGTGCAGCAC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCTGTGGAGTGCTGCACTaGCCCTGGCCCGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCCGVLH*PWPEPL
Trigger: AAGAGGCTCGGGCCAGGGCCAGTGCAGCACTCCACA...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGGGCTTTTGGAGGCTaGAGTCTTAAGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGRAFGG*SLKGWA
Trigger: GGCCCACCCCTTAAGACTCCAGCCTCCAAAAGCCCT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 72 bp AGATGGCTTGGCTCCTCTAGGAGAAGTGGTGGCTGTTaGACCTTCACTAGGGCTTTTGGAGGCTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RWLGSSRRSGGC*TFTRAFGGWSL
Trigger: AAGACTCCAGCCTCCAAAAGCCCTAGTGAAGGTCAAACAGCCACCACTTCTCCTAGAGGAGCCAAGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTTCTACCAGGGGAAATTaGGTTTCGGCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLASTRGN*VSARRL
Trigger: CAGTCTCCTGGCCGAAACTCAATTTCCCCTGGTAGA...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATGTGGAGTGCTGCACTaGCCCTGGCCCGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLCGVLH*PWPEPL
Trigger: AAGAGGCTCGGGCCAGGGCCAGTGCAGCACTCCACA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCGTCCTGGTCCATGCCTaGTTCATGAGCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVVLVHA*FMSFLP
Trigger: TGGCAGGAAGCTCATGAACCAGGCATGGACCAGGAC...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCTCTGAGCACCACTTTTaGAGGGAGATTTCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICSEHHF*REISLL
Trigger: CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGA...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTAGGGCTTTTGGAGGCTaGAGTCTTAAGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPRAFGG*SLKGWA
Trigger: GGCCCACCCCTTAAGACTCCAGCCTCCAAAAGCCCT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTAGAACCTGGACCCTCTaGACTGCAGCATTTACTGCA +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLARTWTL*TAAFTA
Trigger: TGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCT...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCGAGGTTTTTCCTCCTTaGGCCTCATCTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICEVFPP*ASSVLL
Trigger: CAGAAGTACAGATGAGGCTCAAGGAGGAAAAACCTC...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAACTGAGATGGCCGAGCTaGAGTGCTATCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQLRWPS*SAICAA
Trigger: AGCAGCGCAGATAGCACTTCAGCTCGGCCATCTCAG...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAATGATGTTGTGGAGTaGTGCACTGGCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQNDVVE*CTGPGP
Trigger: CGGGCCAGGGCCAGTGCAGCACTCCACAACATCATT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGACCACTTCTACTCTGTaGAGAACTTGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLTTSTL*RTWMEL
Trigger: CAGCTCCATCCAAGTTCTGCACAGAGTAGAAGTGGT...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACCACTTACCATTCCACTaGATGGTTCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADHLPFH*MVHSER
Trigger: CCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTG...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TTGGAATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCCTGCTGCCGCCGGTaGTCCAGGACCCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: LELSSSSCRRFEFSIFSASCCRR*SRTREL
Trigger: CAGTTCTCGGGTCCTGGAGCACCGGCGGCAGCAGGA...GGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR CCA 90 bp TATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTCAGACGCTCGCCCAGTaGCCAGAAGTACGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: YLLALVEDLSSPSSVPQLQTLAQ*PEVRAP
Trigger: CGGCGCTCGTACTTCTGGCCACTGGGCGAGCGTCTG...AAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR TCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGCTGACACTTCTTCCATaGCTTTGGCAATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGLTLLP*LWQSGL
Trigger: CAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAG...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCATTGGCTCCCCGTaGCCTGTATGGAGAAACACA +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPTIGSP*PVWRNT
Trigger: TGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGGTTCTAGGGTGCTGTaGCACTGCTGGAACTTCGCT +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTGSRVL*HCWNFA
Trigger: AGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAACGCCATCCACCAGCCTaGACAGACGAATGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQRHPPA*TDECVD
Trigger: ATCCACACATTCGTCTGTTCAGGCTGGTGGATGGCG...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCGCCATCCACCAGCCTaGACAGACGAATGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTRHPPA*TDECVD
Trigger: ATCCACACATTCGTCTGTTCAGGCTGGTGGATGGCG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAACTGGAGTTGGGATCTaGGATGGCCGAGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQTGVGI*DGRAEV
Trigger: CACTTCAGCTCGGCCATCTCAGATCCCAACTCCAGT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCCCGAGCCTCTTTACTaGCCCGGGAATTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHPEPLY*PGNFPT
Trigger: TGTTGGGAAATTCCCGGGGCAGTAAAGAGGCTCGGG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATCCCGAGCCTCTTTACTaGCCCGGGAATTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHPEPLY*PGNFPT
Trigger: TGTTGGGAAATTCCCGGGGCAGTAAAGAGGCTCGGG...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGTTTTGTCCTGGTCCATaGCTGGTTCATGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VDFWVSEHHFWREISLLKFCPGP*LVHELP
Trigger: AGGAAGCTCATGAACCAGGCATGGACCAGGACAAAA...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCGAAGACGCAGATGCTTaGTGGACCTGGTCCATTATC +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVEDADA*WTWSII
Trigger: GATAATGGACCAGGTCCAGCAAGCATCTGCGTCTTC...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp AATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAACACACCCCGCCCCCTTaGTACTTGCCCTCCGCCATC +
Preference number: 4 (lower is better)
Translates to: NYLLALVEDLSSPSSVPQHTPPP*YLPSAI
Trigger: GATGGCGGAGGGCAAGTAGCAAGGGGGCGGGGTGTG...TTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR GCA 90 bp AATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAAGGCTACCCTTGGACCTaGCAGACGCTCGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: NYLLALVEDLSSPSSVPQGYPWT*QTLAQW
Trigger: CCACTGGGCGAGCGTCTGGCAGGTCCAAGGGTAGCC...TTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR CCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGAGCTGCAGCCATCCTTaGCTACCCTTGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLSCSHP*LPLDPI
Trigger: AATGGGGTCCAAGGGTAGCCAAGGATGGCTGCAGCT...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGTGCTGCACTGGCCCTaGCCCGAGCCTCTTTACTGC +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFVLHWP*PEPLYC
Trigger: GCAGTAAAGAGGCTCGGGCCAGGGCCAGTGCAGCAC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTGTGGAGTGCTGCACTaGCCCTGGCCCGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFCGVLH*PWPEPL
Trigger: AAGAGGCTCGGGCCAGGGCCAGTGCAGCACTCCACA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTTCTGGGCTGCAGTGGTaGAGATCTGCAAACCTCGCT +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLASGLQW*RSANLA
Trigger: AGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGA...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGTTCTGCTTGGTGGCATaGTTTGTCCAGGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGFCLVA*FVQGYL
Trigger: CAGATAGCCCTGGACAAACCATGCCACCAAGCAGAA...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCACAGGCAGCTGACTTaGTTTCCTTGCCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTHRQLT*FPCHRW
Trigger: CCACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGGGACTGAGATTAGGTaGGAGTTTTCGCCATCCACC +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPGTEIR*EFSPST
Trigger: GGTGGATGGCGAAAACTCCCACCTAATCTCAGTCCC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTAACCCACGGTACGCATaGGAACACTGCCATTACCCA +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPNPRYA*EHCHYP
Trigger: TGGGTAATGGCAGTGTTCCCATGCGTACCGTGGGTT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR CAA 72 bp TCTGGGCTGCAGTGGTGGAGATCTGCAAACCTCGCTTaGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: SGLQWWRSANLA*KKFLDFLLLDG
Trigger: ACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CAA 72 bp TGGTGGAGGTGTTTTACTTCTGCTTGGTGGCATGGTTaGTCCAGGGCTATCTGGAAGATCACTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: WWRCFTSAWWHG*SRAIWKITGAY
Trigger: ATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 72 bp CTGTTTGAGGAGGTGGTGGAGGTGTTTTACTTCTGCTaGGTGGCATGGTTTGTCCAGGGCTATCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LFEEVVEVFYFC*VAWFVQGYLED
Trigger: ATCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACACCTCCACCACCTCCTCAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCACGGAGGGACATTTTTaGCCGCAGTTTTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: FVSEPLAPRDLYGETHSCTEGHF*PQFYSR
Trigger: CCTGGAGTAAAACTGCGGTCAAAAATGTCCCTCCGT...GCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCTCCTTTTCGATTTGCTaGATTCTGGCTATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICSFSIC*ILAILR
Trigger: GCGAAGAATAGCCAGAATTCAGCAAATCGAAAAGGA...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCACCTTGGTTCCCAGATaGCTTGTCAGCCTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTATLVPR*LVSLRG
Trigger: ACCTCGAAGGCTGACAAGTCATCTGGGAACCAAGGT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATCAGGCTGTGAGTGAATaGTGTTGTGGAGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHQAVSE*CCGVLH
Trigger: GTGCAGCACTCCACAACATCATTCACTCACAGCCTG...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAACAGCAGGACAGATCTaGTGTTCAACAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQTAGQI*CSTGAG
Trigger: GCCAGCTCCTGTTGAACATCAGATCTGTCCTGCTGT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCACAGCAGGACAGATCTaGTGTTCAACAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCTAGQI*CSTGAG
Trigger: GCCAGCTCCTGTTGAACATCAGATCTGTCCTGCTGT...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAATGTGGTTGGAACTTaGGGTGTTTATCATCAGTGC +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLNVVGT*GVYHQC
Trigger: GCACTGATGATAAACACCTCAAGTTCCAACCACATT...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTACCATTGGCTCCCCGTaGCCTGTATGGAGAAACACA +
Preference number: 4 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTTIGSP*PVWRNT
Trigger: TGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGT...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGGCTTCCTGTGTCGTCTaGTTACATCCTATTTCATCT +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLASCVV*LHPISS
Trigger: AGATGAAATAGGATGTAATCAGACGACACAGGAAGC...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTGGTTCTAGGGTGCTGTaGCACTGCTGGAACTTCGCT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCGSRVL*HCWNFA
Trigger: AGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACC...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATGGACTTTTGGGTGTCTaGGCACCACTTTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHGLLGV*APLLEG
Trigger: TCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCC...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCTGCATGGTTCACTCTaGACGGAGCTGGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLHGSL*TELAIE
Trigger: TTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATTCCCAGAGAGATTCCTaGTTTCAGGGAAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GALLDPPIWDVCLATGLNSQRDS*FQGKDG
Trigger: TCCATCCTTTCCCTGAAATCAGGAATCTCTCTGGGA...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGCCTGCCTCGAGAGATTaGAGGCATGTTTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMPASRD*RHVCLK
Trigger: CTTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGG...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTTGCTGGGCAGGTCTTaGAGGGGTCGAATCTCTAGA +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTALLGRS*RGRISR
Trigger: TCTAGAGATTCGACCCCTTCAAGACCTGCCCAGCAA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCTTGCTGGGCAGGTCTTaGAGGGGTCGAATCTCTAGA +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCLLGRS*RGRISR
Trigger: TCTAGAGATTCGACCCCTTCAAGACCTGCCCAGCAA...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAATCTACCAGGGGAAATTaGGTTTCGGCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQSTRGN*VSARRL
Trigger: CAGTCTCCTGGCCGAAACTCAATTTCCCCTGGTAGA...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GATTGGAATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCAGGACCCGAGAACTaGGGGTGGTACAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: DWNYLLALVEDLSSPSSVPGPEN*GWYRSG
Trigger: CCCGCTTCTGTACCACCCTCAGTTCTCGGGTCCTGG...CACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR GCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTGGACGTATTCTCACTaGTTGAAGACATATGTTCGG +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLWTYSH*LKTYVR
Trigger: CCGAACATATGTCTTCAAGCAGTGAGAATACGTCCA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGCACTTACCATTCCACTaGATGGTTCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGHLPFH*MVHSER
Trigger: CCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTG...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACCCTCGATTTATTGGCTaGTTTGCAATAGCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADPRFIG*FAIACV
Trigger: GACACAAGCTATTGCAAAGCAGCCAATAAATCGAGG...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCGAGCTTATACATTCCTaGAACAGGTCATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICELIHS*NRSSSE
Trigger: CTCTGAAGATGACCTGTTGCAGGAATGTATAAGCTC...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGGATCTTCACCTAATATaGCACCCATATTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLDLHLI*HPYFWD
Trigger: GTCCCAGAAATATGGGTGGCATATTAGGTGAAGATC...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATCCTATTTGGGATGTCTaGCTGGCAACAGGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: GALLDPPIWDVCLATGLNPIWDV*LATGLN
Trigger: ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGG...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCATGGCCGAGCTGAAGTaGTATCTGCGCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAMAELK*YLRCFS
Trigger: GGAAAAGCAGCGCAGATAGCACTTCAGCTCGGCCAT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GATGATTGGAATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGGGCTCTTCGTCTCCTaGCGGACGCAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DDWNYLLALVEDLSSPSSGLFVS*RTQLLL
Trigger: CAGCAGGAGCTGCGTCCGGCAGGAGACGAAGAGCCC...TGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGGCTACCCTTGGACCTaGCTCCTCCTCTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLGYPWT*LLLFLS
Trigger: TGAGAGAAAGAGGAGGAGGCAGGTCCAAGGGTAGCC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508376.6
CDS-3UTR CCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTCGATTTGCTGAATTCTaGCTATTCTTCGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLARFAEF*LFFAVL
Trigger: GAGCACAGCGAAGAATAGCCAGAATTCAGCAAATCG...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTGATATACAGCTGTCTTaGGAGCTAGACATAGCTAGC +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLADIQLS*ELDIAS
Trigger: GCTAGCTATGTCTAGCTCCCAAGACAGCTGTATATC...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAGTGCTGCACTGGCCCTaGCCCGAGCCTCTTTACTGC +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIVLHWP*PEPLYC
Trigger: GCAGTAAAGAGGCTCGGGCCAGGGCCAGTGCAGCAC...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGAAGAAACTTTGCAAGTaGCAGCCTTTTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: VDFWVSEHHFWREISLLKKKLCK*QPFEAD
Trigger: GTCAGCCTCAAAAGGCTGCCACTTGCAAAGTTTCTT...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTCTGAGCACCACTTTTaGAGGGAGATTTCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPSEHHF*REISLL
Trigger: CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTTCTGCTTGGTGGCATaGTTTGTCCAGGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPFCLVA*FVQGYL
Trigger: CAGATAGCCCTGGACAAACCATGCCACCAAGCAGAA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTCAGAGCACTCAGGCTaGATGAACAAGAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLSEHSG*MNKKIH
Trigger: ATGGATTTTCTTGTTCATCCAGCCTGAGTGCTCTGA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGCTGACCTCGATTTATTaGCTGCTTTGCAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLLTSIY*LLCNSL
Trigger: CAAGCTATTGCAAAGCAGCCAATAAATCGAGGTCAG...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGAGGGCTTTTGGAGGCTaGAGTCTTAAGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQRAFGG*SLKGWA
Trigger: GGCCCACCCCTTAAGACTCCAGCCTCCAAAAGCCCT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTACTGGAGTTTGTGCCTaGGACCTAGTGGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTTGVCA*DLVGEA
Trigger: AGCTTCTCCCACTAGGTCCCAGGCACAAACTCCAGT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGGGACTGAGATTAGGTaGGAGTTTTCGCCATCCACC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHGTEIR*EFSPST
Trigger: GGTGGATGGCGAAAACTCCCACCTAATCTCAGTCCC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGACCGTGCAATATCATaGCGCTTTGCTGGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPDRAIS*RFAGLP
Trigger: TGGAAGACCAGCAAAGCGCCATGATATTGCACGGTC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTAACCCACGGTACGCATaGGAACACTGCCATTACCCA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTNPRYA*EHCHYP
Trigger: TGGGTAATGGCAGTGTTCCCATGCGTACCGTGGGTT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR CAA 72 bp TCTGAAGATAAACTAGAACCCTGCAGTCTGCTGGATTaGGTTCTAGGGTGCTGTGACACTGCTGGAACTTCG +
Preference number: 4 (lower is better)
Translates to: SEDKLEPCSLLD*VLGCCDTAGTS
Trigger: CGAAGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATCCAGCAGACTGCAGGGTTCTAGTTTATCTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACACGGAGGGACATTTTTaGCCGCAGTTTTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHTEGHF*PQFYSR
Trigger: CCTGGAGTAAAACTGCGGTCAAAAATGTCCCTCCGT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCAGGCTGTGAGTGAATaGTGTTGTGGAGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCQAVSE*CCGVLH
Trigger: GTGCAGCACTCCACAACATCATTCACTCACAGCCTG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGATCTGTTCCAAAAGATaGAGGACTCGGATTTCACGC +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGICSKR*RTRISR
Trigger: GCGTGAAATCCGAGTCCTTCATCTTTTGGAACAGAT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCTGACACTTCTTCCATaGCTTTGGCAATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLTLLP*LWQSGL
Trigger: CAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACCGTATTCTCACTGCTTaGAGACATATGTTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADRILTA*RHMFGF
Trigger: AAAACCGAACATATGTCTTCAAGCAGTGAGAATACG...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCACTGCATGGTTCACTCTaGACGGAGCTGGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: RMESESDEACLDKHAAAALHGSL*TELAIE
Trigger: TTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAG...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCAGAACCTGGACCCTCTaGACTGCAGCATTTACTGCA +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTARTWTL*TAAFTA
Trigger: TGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTTTGTACACAGGCAGCTaGCTTGGTTTCCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLYTGS*LGFLAT
Trigger: TGTGGCAAGGAAACCAAGTCAGCTGCCTGTGTACAA...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTTTGTACACAGGCAGCTaGCTTGGTTTCCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLALYTGS*LGFLAT
Trigger: TGTGGCAAGGAAACCAAGTCAGCTGCCTGTGTACAA...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCCTGCCTCGAGAGATTaGAGGCATGTTTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAPASRD*RHVCLK
Trigger: CTTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATTGCTGGGCAGGTCTTaGAGGGGTCGAATCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLLLGRS*RGRISR
Trigger: TCTAGAGATTCGACCCCTTCAAGACCTGCCCAGCAA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGAGCAGTACTAGGGGATaGTGTCCTTGGAAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMSSTRG*CPWKLR
Trigger: TCTCAACTTCCAAGGACATCATCCCCTAGTACTGCT...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTGCCCGAGAAGGCAACTaGGTGCTTCACCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: YLLALVEDLSSPSSVPQLAREGN*VLHLPH
Trigger: GTGAGGAAGGTGAAGCACTCAGTTGCCTTCTCGGGC...AAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCCCGAGCCTCTTTACTaGCCCGGGAATTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQPEPLY*PGNFPT
Trigger: TGTTGGGAAATTCCCGGGGCAGTAAAGAGGCTCGGG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCACTCGGATTTCACGCCTaGCTCTCTTGTCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSLGFHA*LSCHQA
Trigger: AGCCTGATGACAAGAGAGGCAGGCGTGAAATCCGAG...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCAGTGCCAACCAAAAATaGAAGTGCACCATCTACAGC +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVSANQK*KCTIYS
Trigger: GCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACT...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACAGAGCTTCTTCTAAGTaGATTTCTCTCATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADRASSK*ISLICH
Trigger: GTGACAGATGAGAGAAATGCACTTAGAAGAAGCTCT...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCGGAGAAACACATTCCTaGTGTCCAAAATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVGETHS*CPKCGW
Trigger: CCAACCACATTTTGGACAGCAGGAATGTGTTTCTCC...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGACCACTTCTACTCTGTaGAGAACTTGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMTTSTL*RTWMEL
Trigger: CAGCTCCATCCAAGTTCTGCACAGAGTAGAAGTGGT...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATGAGGTGTTTTACTTCTaGTTGGTGGCATGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: GALLDPPIWDVCLATGLNEVFYF*LVAWFV
Trigger: GACAAACCATGCCACCAAGCAGAAGTAAAACACCTC...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAACTGGACCCTCTGAACTaGAGCATTTACTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQLDPLN*SIYCSL
Trigger: CAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAG...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGAAGACGCAGATGCTTaGTGGACCTGGTCCATTATC +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTEDADA*WTWSII
Trigger: GATAATGGACCAGGTCCAGCAAGCATCTGCGTCTTC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAGAAGAAGACGCAGATaGTTGCTGGACCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQRRRRR*LLDLVH
Trigger: ATGGACCAGGTCCAGCAAGCATCTGCGTCTTCTTCT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCCTATTTGGGATGTCTaGCTGGCAACAGGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPPIWDV*LATGLN
Trigger: ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTGGTCTACTTAATGGTTaGTGGGCAGGTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTGLLNG*WAGLEG
Trigger: CCCTTCAAGACCTGCCCAGCAACCATTAAGTAGACC...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGAGCTGCAGCCATCCTTaGCTACCCTTGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQSCSHP*LPLDPI
Trigger: AATGGGGTCCAAGGGTAGCCAAGGATGGCTGCAGCT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGTCTGGGCTGCAGTGGTaGAGATCTGCAAACCTCGCT +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELSGLQW*RSANLA
Trigger: AGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGA...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATATGACTTTGGCAATCTaGGCTGCAGTGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHMTLAI*AAVVEI
Trigger: GATCTCCACCACTGCAGCCCAGATTGCCAAAGTCAT...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGTTGTTTCTGAACCATTaGCTCCCCGTGACCTGTATG +
Preference number: 4 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMLFLNH*LPVTCM
Trigger: CATACAGGTCACGGGGAGCCAATGGTTCAGAAACAA...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTCTGAGCACCACTTTTaGAGGGAGATTTCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTASEHHF*REISLL
Trigger: CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCTCTGCTAAACATGAGTaGGGTCTCCTGAACATAGTG +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVSAKHE*GLLNIV
Trigger: CACTATGTTCAGGAGACCCCACTCATGTTTAGCAGA...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGCACTCTGAACGGAGCTaGCAATCGAACGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLHSERS*QSNDSQ
Trigger: TTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTG...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCACTCTGAACGGAGCTaGCAATCGAACGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAHSERS*QSNDSQ
Trigger: TTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGTTGTCCAGGGCTATCTaGAAGATCACTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMLSRAI*KITGAY
Trigger: ATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAA...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTTCTGCTTGGTGGCATaGTTTGTCCAGGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAFCLVA*FVQGYL
Trigger: CAGATAGCCCTGGACAAACCATGCCACCAAGCAGAA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGACACAGGCAGCTGACTTaGTTTCCTTGCCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRHRQLT*FPCHRW
Trigger: CCACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTG...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGAACACAATACACCCGTaGCATATCATCCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLNTIHP*HIIPRC
Trigger: ACACCGGGGGATGATATGCCACGGGTGTATTGTGTT...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTGATGCTTGCTGGACCTaGTCCATTATCTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLADACWT*SIIFFT
Trigger: TGTGAAAAAGATAATGGACCAGGTCCAGCAAGCATC...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAAATCCTTGGCTACCCTTaGACCTGCCAGACGCTCGCC +
Preference number: 4 (lower is better)
Translates to: NYLLALVEDLSSPSSVPQILGYP*TCQTLA
Trigger: GGCGAGCGTCTGGCAGGTCCAAGGGTAGCCAAGGAT...TTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR CCA 90 bp TATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTAGCTGCAGCCATCCTTaGCTACCCTTGGACCTGCCA +
Preference number: 4 (lower is better)
Translates to: YLLALVEDLSSPSSVPQLSCSHP*LPLDLP
Trigger: TGGCAGGTCCAAGGGTAGCCAAGGATGGCTGCAGCT...AAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGTCTCCTCTCTCTTTTaGCCACCAATGCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHVSSLF*PPMHVS
Trigger: GGACACATGCATTGGTGGCCAAAAGAGAGAGGAGAC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTACGGAGGGACATTTTTaGCCGCAGTTTTACTCCAGG +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCTEGHF*PQFYSR
Trigger: CCTGGAGTAAAACTGCGGTCAAAAATGTCCCTCCGT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAACCCTCTTCTTGGAAATaGACCCATAGGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQPSSWK*THRNRT
Trigger: AGTCCTGTTCCTATGGGTTCATTTCCAAGAAGAGGG...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATCCCTCTTCTTGGAAATaGACCCATAGGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHPSSWK*THRNRT
Trigger: AGTCCTGTTCCTATGGGTTCATTTCCAAGAAGAGGG...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCCTTCCATCGCAACTCTaGTTTGCCTTGCTTCATATT +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVLPSQL*FALLHI
Trigger: AATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAG...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAATGCTTGTTCTGAGATaGCCTCTCTGCTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQMLVLR*PLCFCC
Trigger: GCAACAGAAGCAGAGAGGTCATCTCAGAACAAGCAT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTATGCTTGTTCTGAGATaGCCTCTCTGCTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTMLVLR*PLCFCC
Trigger: GCAACAGAAGCAGAGAGGTCATCTCAGAACAAGCAT...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCCGCTCAGCATCATGTaGGCCGGTTTCATGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQPLSIM*AGFMLV
Trigger: AACAAGCATGAAACCGGCTCACATGATGCTGAGCGG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCACCGCTCAGCATCATGTaGGCCGGTTTCATGCTTGTT +
Preference number: 4 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPPLSIM*AGFMLV
Trigger: AACAAGCATGAAACCGGCTCACATGATGCTGAGCGG...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCAGAAGTTGCCATGTTaGTTTCTCCCACTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAQKLPC*FLPLLD
Trigger: GTCAAGGAGTGGGAGAAATCAACATGGCAACTTCTG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTTTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLAFRISC*EIPQSS
Trigger: GGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAA...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCTGACACTTCTTCCATaGCTTTGGCAATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCLTLLP*LWQSGL
Trigger: CAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTGAAATTGTAAGTGTTTaGATGTGTATGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLAEIVSV*MCMGSR
Trigger: TCTGCTGCCCATACACATTCAAACACTTACAATTTC...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTGTACTTTGATTCCTTaGTTGTCTTTGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLCTLIP*LSLLTL
Trigger: CAAAGTGAGCAAAGACAATCAAGGAATCAAAGTACA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAATGTGGTTGGAACTTaGGGTGTTTATCATCAGTGC +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGNVVGT*GVYHQC
Trigger: GCACTGATGATAAACACCTCAAGTTCCAACCACATT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCGAACTTGGATGGAGCTaGTTCTGCCTCTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAELGWS*FCLLAL
Trigger: TAATGCCAAGAGGCAGAATCAGCTCCATCCAAGTTC...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCGAACTTGGATGGAGCTaGTTCTGCCTCTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCELGWS*FCLLAL
Trigger: TAATGCCAAGAGGCAGAATCAGCTCCATCCAAGTTC...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGAACTTGGATGGAGCTaGTTCTGCCTCTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHELGWS*FCLLAL
Trigger: TAATGCCAAGAGGCAGAATCAGCTCCATCCAAGTTC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCGGTTCTAGGGTGCTGTaGCACTGCTGGAACTTCGCT +
Preference number: 4 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLGSRVL*HCWNFA
Trigger: AGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACC...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTAGCACTCAGGCTGGATaGACAAGAAAATCCATCTGG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTSTQAG*TRKSIW
Trigger: CCAGATGGATTTTCTTGTTCATCCAGCCTGAGTGCT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGAGGTTTTTCCTCCTTaGGCCTCATCTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHEVFPP*ASSVLL
Trigger: CAGAAGTACAGATGAGGCTCAAGGAGGAAAAACCTC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTAGTATGGGTTTAGGCTaGCCTCGATTTATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTSMGLG*PRFIGC
Trigger: GCAGCCAATAAATCGAGGTCAGCCTAAACCCATACT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTAGTATGGGTTTAGGCTaGCCTCGATTTATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLASMGLG*PRFIGC
Trigger: GCAGCCAATAAATCGAGGTCAGCCTAAACCCATACT...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGCAGCAGCAGCAGCTTaGTGTAAACTACTTACTATG +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPAAAAA*CKLLTM
Trigger: CATAGTAAGTAGTTTACATCAAGCTGCTGCTGCTGC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAACGAACTCCTGGAATATaGATCATTGTCCTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQRTPGI*IIVLPR
Trigger: TCGAGGCAGGACAATGATTCATATTCCAGGAGTTCG...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCGAACTCCTGGAATATaGATCATTGTCCTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTRTPGI*IIVLPR
Trigger: TCGAGGCAGGACAATGATTCATATTCCAGGAGTTCG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAGCAGTACTAGGGGATaGTGTCCTTGGAAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQSSTRG*CPWKLR
Trigger: TCTCAACTTCCAAGGACATCATCCCCTAGTACTGCT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACAGCAGTACTAGGGGATaGTGTCCTTGGAAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHSSTRG*CPWKLR
Trigger: TCTCAACTTCCAAGGACATCATCCCCTAGTACTGCT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCCTGAGGAAACGGTCTaGGAAGTACTATTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHPEETV*EVLFVG
Trigger: TCCCACAAATAGTACTTCTCAGACCGTTTCCTCAGG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCCTGAGGAAACGGTCTaGGAAGTACTATTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTPEETV*EVLFVG
Trigger: TCCCACAAATAGTACTTCTCAGACCGTTTCCTCAGG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATGTCAGCCTTCGAGGTaGAGAGTGTGTGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLCQPSR*RVCATR
Trigger: TCTAGTAGCACACACTCTGCACCTCGAAGGCTGACA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATGTCAGCCTTCGAGGTaGAGAGTGTGTGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSCQPSR*RVCATR
Trigger: TCTAGTAGCACACACTCTGCACCTCGAAGGCTGACA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTTTTTGTCCTGGTCCATaGCTGGTTCATGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTFCPGP*LVHELP
Trigger: AGGAAGCTCATGAACCAGGCATGGACCAGGACAAAA...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGAGTGCCAACCAAAAATaGAAGTGCACCATCTACAGC +
Preference number: 4 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMSANQK*KCTIYS
Trigger: GCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACT...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACCCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 4 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTTGCTGGATGGTAGTTaGCTAGACCAATTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHLLDGS*LDQFRV
Trigger: AACGCGGAATTGGTCTAGGCAACTACCATCCAGCAA...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTACCACTTCTACTCTGTaGAGAACTTGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTTTSTL*RTWMEL
Trigger: CAGCTCCATCCAAGTTCTGCACAGAGTAGAAGTGGT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGATTTGGTTCTAGGGTaGTGTGACACTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQDLVLG*CDTAGT
Trigger: AGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGGATAAACTAGAACCCTaGAGTCTGCTGGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGDKLEP*SLLDLV
Trigger: AACCAAATCCAGCAGACTGCAGGGTTCTAGTTTATC...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCACTTACCATTCCACTaGATGGTTCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAHLPFH*MVHSER
Trigger: CCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGCATTTACTGCAGCTTaGTTAGGTCCACTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQAFTAA*LGPLSL
Trigger: GAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTGCATTTACTGCAGCTTaGTTAGGTCCACTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLAAFTAA*LGPLSL
Trigger: GAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGC...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCACTGGACCCTCTGAACTaGAGCATTTACTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSLDPLN*SIYCSL
Trigger: CAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAG...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAGAAGAAGACGCAGATaGTTGCTGGACCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLRRRRR*LLDLVH
Trigger: ATGGACCAGGTCCAGCAAGCATCTGCGTCTTCTTCT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCTTTTCATCAGTTGCTaGCCCTCTGTCTGGTATGTC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHLFISC*PSVWYV
Trigger: GACATACCAGACAGAGGGGCAGCAACTGATGAAAAG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGATGAATGTTTGCTGTaGTCACGTTTCCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPDECLL*SRFQVP
Trigger: AGGAACCTGGAAACGTGAGCACAGCAAACATTCATC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCAGTTCTTCTCCAAGTaGTTACTCGAGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTQFFSK*LLEEGM
Trigger: CATCCCTTCCTCGAGTAAGCACTTGGAGAAGAACTG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTCACTGCTGAGATCTTaGCCTAACATACAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPSLLRS*PNIQGD
Trigger: ATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACATCCAGACTGTCGCATaGATATACAGCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHIQTVA*IYSCLG
Trigger: CCCAAGACAGCTGTATATCCATGCGACAGTCTGGAT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTATCCAGACTGTCGCATaGATATACAGCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTIQTVA*IYSCLG
Trigger: CCCAAGACAGCTGTATATCCATGCGACAGTCTGGAT...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGTCCTGGTCCATGCCTaGTTCATGAGCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFVLVHA*FMSFLP
Trigger: TGGCAGGAAGCTCATGAACCAGGCATGGACCAGGAC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGCAATAATTCTGCAATaGCCTGTAGTCCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPAIILQ*PVVPLV
Trigger: AACTAGGGGGACTACAGGCCATTGCAGAATTATTGC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTCTGGGCTGCAGTGGTaGAGATCTGCAAACCTCGCT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGSGLQW*RSANLA
Trigger: AGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATGTGTTTGAATGTGTATaGGCAGCAGAGCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: GALLDPPIWDVCLATGLNVFECV*AAELLL
Trigger: TAGAAGAAGCTCTGCTGCCCATACACATTCAAACAC...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTTTGTTTCTGAACCATTaGCTCCCCGTGACCTGTATG +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLALFLNH*LPVTCM
Trigger: CATACAGGTCACGGGGAGCCAATGGTTCAGAAACAA...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACTTGTTTCTGAACCATTaGCTCCCCGTGACCTGTATG +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHLFLNH*LPVTCM
Trigger: CATACAGGTCACGGGGAGCCAATGGTTCAGAAACAA...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGTTCAGGTGGACTTTTaGGTGTCTGAGCACCACTTT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQVQVDF*VSEHHF
Trigger: AAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAAC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATGTTCAGGTGGACTTTTaGGTGTCTGAGCACCACTTT +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHVQVDF*VSEHHF
Trigger: AAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAAC...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCACACTCTGAACGGAGCTaGCAATCGAACGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSHSERS*QSNDSQ
Trigger: TTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTG...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACTACCATTCCACTGCATaGTTCACTCTGAACGGAGCT +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHYHSTA*FTLNGA
Trigger: AGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTA...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTTACCATTCCACTGCATaGTTCACTCTGAACGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLAYHSTA*FTLNGA
Trigger: AGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTA...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTTGTCCAGGGCTATCTaGAAGATCACTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTALSRAI*KITGAY
Trigger: ATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTTTACTTCTGCTTGGTaGCATGGTTTGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAFTSAW*HGLSRA
Trigger: AGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAACACAATACACCCGTaGCATATCATCCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCNTIHP*HIIPRC
Trigger: ACACCGGGGGATGATATGCCACGGGTGTATTGTGTT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGACGCAGATGCTTGCTaGACCTGGTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQDADAC*TWSIIF
Trigger: AAAGATAATGGACCAGGTCCAGCAAGCATCTGCGTC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTATTTCAGGGAAAGGATaGAATCTGAATCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLAISGKG*NLNQTK
Trigger: CTTCGTCTGATTCAGATTCCATCCTTTCCCTGAAAT...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACTACTTAATGGTTGCTaGGCAGGTCTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLLLNGC*AGLEGV
Trigger: GACCCCTTCAAGACCTGCCCAGCAACCATTAAGTAG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR CAA 72 bp GGCAAGCTTGAGCCAGGAGACATAATATTGGCATCCTaGTACTTCGCAGGCCTATTTGCCATGAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: GKLEPGDIILAS*YFAGLFAMRFL
Trigger: AAGGAATCTCATGGCAAATAGGCCTGCGAAGTACAAGGATGCCAATATTATGTCTCCTGGCTCAAGCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CAA 72 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTaGCTGGATGGTAGTTGCCTAGACCAATTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFL*LDGSCLDQFRV
Trigger: AACGCGGAATTGGTCTAGGCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCTCTTGTCGAAGATTTaGGTTCTCCATCTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHLLSKI*VLHLQC
Trigger: GCACTGAAGATGGAGAACTCAAATCTTCGACAAGAG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCGTTTCATGCTTGTTCTaGGATGACCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAVSCLF*DDLSAS
Trigger: AGAAGCAGAGAGGTCATCTCAGAACAAGCATGAAAC...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTGTTTCATGCTTGTTCTaGGATGACCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLAVSCLF*DDLSAS
Trigger: AGAAGCAGAGAGGTCATCTCAGAACAAGCATGAAAC...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCCGCTCAGCATCATGTaGGCCGGTTTCATGCTTGTT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFPLSIM*AGFMLV
Trigger: AACAAGCATGAAACCGGCTCACATGATGCTGAGCGG...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCAGAAGTTGCCATGTTaGTTTCTCCCACTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCQKLPC*FLPLLD
Trigger: GTCAAGGAGTGGGAGAAATCAACATGGCAACTTCTG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATCATCAGGCTGTGAGTaGATGATGTTGTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSSSGCE*MMLWSA
Trigger: AGCACTCCACAACATCATTCACTCACAGCCTGATGA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCACTTGTCATCAGGCTGTaGGTGAATGATGTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSLVIRL*VNDVVE
Trigger: CTCCACAACATCATTCACTCACAGCCTGATGACAAG...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCATCTGTTCCAAAAGATaGAGGACTCGGATTTCACGC +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAICSKR*RTRISR
Trigger: GCGTGAAATCCGAGTCCTTCATCTTTTGGAACAGAT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCAAGAGATGGCAAGCTTaGGCCAGGAGACATAATATT +
Preference number: 4 (lower is better)
Translates to: FVSEPLAPRDLYGETHSCKRWQA*ARRHNI
Trigger: AATATTATGTCTCCTGGCTCAAGCTTGCCATCTCTT...GCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATCTCTGCTTACTACGATaGGATGCCTTGGGACTTAAA +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHLCLLR*DALGLK
Trigger: TTTAAGTCCCAAGGCATCTCATCGTAGTAAGCAGAG...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCTGCAAACCTCGCTTTaGAGAAGTTCCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHLQTSL*RSSWIF
Trigger: GAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCTGCAAACCTCGCTTTaGAGAAGTTCCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLQTSL*RSSWIF
Trigger: GAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCAGAGGTATGAATGGCTaGCACTTCTTCCATGACTTT +
Preference number: 4 (lower is better)
Translates to: FVSEPLAPRDLYGETHSCRGMNG*HFFHDF
Trigger: AAAGTCATGGAAGAAGTGTCAGCCATTCATACCTCT...GCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGCTTCCTGTGTCGTCTaGTTACATCCTATTTCATCT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPASCVV*LHPISS
Trigger: AGATGAAATAGGATGTAATCAGACGACACAGGAAGC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGGACTTTTGGGTGTCTaGGCACCACTTTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGGLLGV*APLLEG
Trigger: TCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGGACTTTTGGGTGTCTaGGCACCACTTTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFGLLGV*APLLEG
Trigger: TCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCTGCATGGTTCACTCTaGACGGAGCTGGCAATCGAA +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFLHGSL*TELAIE
Trigger: TTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAG...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCTTCTTTAGGCTGCTCTaGTTCTGTTTCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVFFRLL*FCFIPI
Trigger: AATGGGAATGAAACAGAATCAGAGCAGCCTAAAGAA...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTTGTACACAGGCAGCTaGCTTGGTTTCCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLYTGS*LGFLAT
Trigger: TGTGGCAAGGAAACCAAGTCAGCTGCCTGTGTACAA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACTTTTTCAAATTCACCTaGCTGTGCCCCTCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHFFKFT*LCPSSN
Trigger: GTTAGAGGAGGGGCACAGTCAGGTGAATTTGAAAAA...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCTTTTTCAAATTCACCTaGCTGTGCCCCTCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCFFKFT*LCPSSN
Trigger: GTTAGAGGAGGGGCACAGTCAGGTGAATTTGAAAAA...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAATTTAGGAGCATAGCCTaGTGCTTGAGGTTTACTTGG +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQFRSIA*CLRFTW
Trigger: CCAAGTAAACCTCAAGCATCAGGCTATGCTCCTAAA...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTTTAGGAGCATAGCCTaGTGCTTGAGGTTTACTTGG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAFRSIA*CLRFTW
Trigger: CCAAGTAAACCTCAAGCATCAGGCTATGCTCCTAAA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGTTTAGGAGCATAGCCTaGTGCTTGAGGTTTACTTGG +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLFRSIA*CLRFTW
Trigger: CCAAGTAAACCTCAAGCATCAGGCTATGCTCCTAAA...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGGAAAGGATGGAATCTaGATCAGACGAAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTGKDGI*IRRSLS
Trigger: AGACAAGCTTCGTCTGATTCAGATTCCATCCTTTCC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCGGAAAGGATGGAATCTaGATCAGACGAAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAGKDGI*IRRSLS
Trigger: AGACAAGCTTCGTCTGATTCAGATTCCATCCTTTCC...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTGGAAAGGATGGAATCTaGATCAGACGAAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLAGKDGI*IRRSLS
Trigger: AGACAAGCTTCGTCTGATTCAGATTCCATCCTTTCC...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAACAGGACTTGTACTTaGGGAGCTATTTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQNRTCT*GAISNS
Trigger: GGAGTTCGAAATAGCTCCTCAAGTACAAGTCCTGTT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATAACAGGACTTGTACTTaGGGAGCTATTTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHNRTCT*GAISNS
Trigger: GGAGTTCGAAATAGCTCCTCAAGTACAAGTCCTGTT...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAGAAGGTGCTTTACTTaGCCCACCTATTTGGGATGT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQRRCFT*PTYLGC
Trigger: ACATCCCAAATAGGTGGGTCAAGTAAAGCACCTTCT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAACGTTTCCAGGTTCCTaGCCTATTGATTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQTFPGS*PIDWKS
Trigger: AGACTTCCAATCAATAGGTCAGGAACCTGGAAACGT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTCAGGGGCATCCACCTaGATAAAGGAGTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGSGAST*IKEFRR
Trigger: TCGCCTGAACTCCTTTATTCAGGTGGATGCCCCTGA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCTGAGATGGCCGAGCTaGAGTGCTATCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPLRWPS*SAICAA
Trigger: AGCAGCGCAGATAGCACTTCAGCTCGGCCATCTCAG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTTGCAACAAGAAGATaGAGGGGCAAGACAGTTTAC +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTVATRR*RGKTVY
Trigger: GTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAAC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCAGCATGGCAAAGTGCTaGTTATACTTCACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTASMAKC*LYFTAE
Trigger: CTCAGCAGTGAAGTATAATCAGCACTTTGCCATGCT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTTGCTGGATGGTAGTTaGCTAGACCAATTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCLLDGS*LDQFRV
Trigger: AACGCGGAATTGGTCTAGGCAACTACCATCCAGCAA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATTGCTGGATGGTAGTTaGCTAGACCAATTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSLLDGS*LDQFRV
Trigger: AACGCGGAATTGGTCTAGGCAACTACCATCCAGCAA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGGTATTAGCAGAATCTaGTTCCTGTGTCGTCTGATT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPGISRI*FLCRLI
Trigger: AATCAGACGACACAGGAAGCAGATTCTGCTAATACC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTAACTGCAGCATTTACTaGAGCTTGCTTAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTNCSIY*SLLRST
Trigger: AGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTT...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGAGAAGAAGACGCAGATaGTTGCTGGACCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELRRRRR*LLDLVH
Trigger: ATGGACCAGGTCCAGCAAGCATCTGCGTCTTCTTCT...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCTGATTTTTGTTGGGTaGAGAAGAAGACGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTALIFVG*RRRRRC
Trigger: GCATCTGCGTCTTCTTCTGCACCCAACAAAAATCAG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTATGAATCATTGTCCTaGCTCGAGAGATTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPYESLS*LERLKA
Trigger: TGCCTTCAATCTCTCGAGGCAGGACAATGATTCATA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACCTATTTGGGATGTCTaGCTGGCAACAGGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLPIWDV*LATGLN
Trigger: ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTTCAGAATGAGACCGTaGAATATCATGGCGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAFRMRP*NIMALC
Trigger: GCAAAGCGCCATGATATTGCACGGTCTCATTCTGAA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACAGTTCTTCTCCAAGTaGTTACTCGAGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLQFFSK*LLEEGM
Trigger: CATCCCTTCCTCGAGTAAGCACTTGGAGAAGAACTG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGCCTATTATGCTCAATaGTTAGTCTGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHAYYAQ*LVCARL
Trigger: CAGCCTAGCACAGACTAAGCATTGAGCATAATAGGC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTCACTGCTGAGATCTTaGCCTAACATACAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTASLLRS*PNIQGD
Trigger: ATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGCGTTTTTCCATATCCTaGCAGGTACCTAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMRFSIS*QVPSCS
Trigger: AGAACAACTAGGTACCTGCCAGGATATGGAAAAACG...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACACTGGCTGTTTCATaGTCCATTCGTGTAGTTGAA +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPTLAVS*SIRVVE
Trigger: TTCAACTACACGAATGGACCATGAAACAGCCAGTGT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCACACCATTTCCACCTTaGTTCCCAGATGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTATPFPP*FPDDLS
Trigger: TGACAAGTCATCTGGGAACCAAGGTGGAAATGGTGT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTACACCATTTCCACCTTaGTTCCCAGATGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTTPFPP*FPDDLS
Trigger: TGACAAGTCATCTGGGAACCAAGGTGGAAATGGTGT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCAACAGGAGCTGGCATTaGATTTTTGTCCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTANRSWH*IFVLVH
Trigger: ATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTAACAGGAGCTGGCATTaGATTTTTGTCCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLANRSWH*IFVLVH
Trigger: ATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTT...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTGCAATAATTCTGCAATaGCCTGTAGTCCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTAIILQ*PVVPLV
Trigger: AACTAGGGGGACTACAGGCCATTGCAGAATTATTGC...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTACGATGAGATGCCTTaGGACTTAAATTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: QVDFWVSEHHFWREISLLYDEMP*DLNCLY
Trigger: ATATAGACAATTTAAGTCCCAAGGCATCTCATCGTA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATCTGGGCTGCAGTGGTaGAGATCTGCAAACCTCGCT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHESGLQW*RSANLA
Trigger: AGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCGCACTATGTATTTTATaGGCTAGGTCGGCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCALCIL*ARSAGY
Trigger: ATACCCAGCCGACCTAGCCCATAAAATACATAGTGC...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCTGAGCACCACTTTTaGAGGGAGATTTCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FCYLQGISRICFLCRLITSEHHF*REISLL
Trigger: CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGA...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGTTCAGGTGGACTTTTaGGTGTCTGAGCACCACTTT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLVQVDF*VSEHHF
Trigger: AAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAAC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTTACCATTCCACTGCATaGTTCACTCTGAACGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLSKMWLELEVFIISALSYHSTA*FTLNGA
Trigger: AGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTA...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATTGTCCAGGGCTATCTaGAAGATCACTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLLSRAI*KITGAY
Trigger: ATAAGCCCCAGTGATCTTCCAGATAGCCCTGGACAA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCACAAGAAAATCCATCTaGAGTACTTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVTRKSI*STFRGK
Trigger: TTTGCCACGGAAAGTACTCCAGATGGATTTTCTTGT...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACACAGGCAGCTGACTTaGTTTCCTTGCCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEHRQLT*FPCHRW
Trigger: CCACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTGACGCAGATGCTTGCTaGACCTGGTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCDADAC*TWSIIF
Trigger: AAAGATAATGGACCAGGTCCAGCAAGCATCTGCGTC...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGACGCAGATGCTTGCTaGACCTGGTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSDADAC*TWSIIF
Trigger: AAAGATAATGGACCAGGTCCAGCAAGCATCTGCGTC...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGAGGTTAGTTCTGTGTaGCTGGTAACTTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTEVSSV*LVTLAS
Trigger: AGAGGCTAAAGTTACCAGCCACACAGAACTAACCTC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCGAGGTTAGTTCTGTGTaGCTGGTAACTTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAEVSSV*LVTLAS
Trigger: AGAGGCTAAAGTTACCAGCCACACAGAACTAACCTC...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCTACTTAATGGTTGCTaGGCAGGTCTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLLNGC*AGLEGV
Trigger: GACCCCTTCAAGACCTGCCCAGCAACCATTAAGTAG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGCTACTTAATGGTTGCTaGGCAGGTCTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELLLNGC*AGLEGV
Trigger: GACCCCTTCAAGACCTGCCCAGCAACCATTAAGTAG...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGTTGGTAAGGTTCTGTTaGCTCATCTGTCTACCTGGA +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLLVRFC*LICLPG
Trigger: TCCAGGTAGACAGATGAGCCAACAGAACCTTACCAA...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGCTGCTAGAACTGAATaGGGTACGTTCCACTATAGA +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHAARTE*GTFHYR
Trigger: TCTATAGTGGAACGTACCCCATTCAGTTCTAGCAGC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGACTTTGGGTTCCACTaGATTCTGTGCTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQDFGFH*ILCCQF
Trigger: AAACTGACAGCACAGAATCCAGTGGAACCCAAAGTC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAAGCTGCAGCCATCCTTaGCTACCCTTGGACCTGCCT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPESCSHP*LPLDLP
Trigger: AGGCAGGTCCAAGGGTAGCCAAGGATGGCTGCAGCT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508376.6
3UTR CAA 72 bp CCCCGGGAATTTCCCAACAATACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATGAGGAGAGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: PREFPNNTESLS*PCKSWMRRGRH
Trigger: ATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTCCCGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 72 bp TTACTGCCCCGGGAATTTCCCAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGCTGGATGAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLPREFPNNTES*SLPCKSWMRRG
Trigger: TCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTCCCGGGGCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 72 bp CTGATTTTTGTTGGGTGCAGAAGAAGACGCAGATGCTaGCTGGACCTGGTCCATTATCTTTTTCACACGGAA +
Preference number: 4 (lower is better)
Translates to: LIFVGCRRRRRC*LDLVHYLFHTE
Trigger: TTCCGTGTGAAAAAGATAATGGACCAGGTCCAGCAAGCATCTGCGTCTTCTTCTGCACCCAACAAAAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHTCFNN*SYEAAA
Trigger: GGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACATCAGCAAGAAGCAATaGCCTCTCTTTCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHISKKQ*PLFLKF
Trigger: GAACTTGAGAAAGAGAGGTCATTGCTTCTTGCTGAT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGATGCTTGTTCTGAGATaGCCTCTCTGCTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQMLVLR*PLCFCC
Trigger: GCAACAGAAGCAGAGAGGTCATCTCAGAACAAGCAT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTGTTTCATGCTTGTTCTaGGATGACCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCVSCLF*DDLSAS
Trigger: AGAAGCAGAGAGGTCATCTCAGAACAAGCATGAAAC...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCTTGTCATCAGGCTGTaGGTGAATGATGTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLVIRL*VNDVVE
Trigger: CTCCACAACATCATTCACTCACAGCCTGATGACAAG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGTTCCACATGCATTACTaGCTATTGTCAAACTATGAG +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGFHMHY*LLSNYE
Trigger: CTCATAGTTTGACAATAGTCAGTAATGCATGTGGAA...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCAAGAGATGGCAAGCTTaGGCCAGGAGACATAATATT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAKRWQA*ARRHNI
Trigger: AATATTATGTCTCCTGGCTCAAGCTTGCCATCTCTT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACTCTGCTTACTACGATaGGATGCCTTGGGACTTAAA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLLCLLR*DALGLK
Trigger: TTTAAGTCCCAAGGCATCTCATCGTAGTAAGCAGAG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTAGTATTCAAATATGGTaGAAGGACAGTCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPSIQIW*KDSHVA
Trigger: GGCAACATGACTGTCCTTTCACCATATTTGAATACT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCCTGACACTTCTTCCATaGCTTTGGCAATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLLTLLP*LWQSGL
Trigger: CAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAG...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTAGAGGTATGAATGGCTaGCACTTCTTCCATGACTTT +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTRGMNG*HFFHDF
Trigger: AAAGTCATGGAAGAAGTGTCAGCCATTCATACCTCT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATAGAGGTATGAATGGCTaGCACTTCTTCCATGACTTT +
Preference number: 4 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHRGMNG*HFFHDF
Trigger: AAAGTCATGGAAGAAGTGTCAGCCATTCATACCTCT...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCACCATCTTTCATTCTGTaGAGGACTTTGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSPSFIL*RTLPSR
Trigger: TCTGGAAGGCAAAGTCCTTCACAGAATGAAAGATGG...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACAATGTGGTTGGAACTTaGGGTGTTTATCATCAGTGC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHNVVGT*GVYHQC
Trigger: GCACTGATGATAAACACCTCAAGTTCCAACCACATT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAACCATTGGCTCCCCGTaGCCTGTATGGAGAAACACA +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHETIGSP*PVWRNT
Trigger: TGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCGTATTCTCACTGCTTaGAGACATATGTTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPRILTA*RHMFGF
Trigger: AAAACCGAACATATGTCTTCAAGCAGTGAGAATACG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACGAACTTGGATGGAGCTaGTTCTGCCTCTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDELGWS*FCLLAL
Trigger: TAATGCCAAGAGGCAGAATCAGCTCCATCCAAGTTC...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGCTTCCTGTGTCGTCTaGTTACATCCTATTTCATCT +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLASCVV*LHPISS
Trigger: AGATGAAATAGGATGTAATCAGACGACACAGGAAGC...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGAGCACTCAGGCTGGATaGACAAGAAAATCCATCTGG +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELSTQAG*TRKSIW
Trigger: CCAGATGGATTTTCTTGTTCATCCAGCCTGAGTGCT...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAGGTATGGTTACAGATaGGGTTTTTCCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCRYGYR*GFSSLS
Trigger: GCTCAAGGAGGAAAAACCTCATCTGTAACCATACCT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCTCAGAGAGGAATTATaGGAAAAGCAAACCGGAGTA +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTALREEL*EKQTGV
Trigger: TACTCCGGTTTGCTTTTCTCATAATTCCTCTCTGAG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCCTCAGAGAGGAATTATaGGAAAAGCAAACCGGAGTA +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCLREEL*EKQTGV
Trigger: TACTCCGGTTTGCTTTTCTCATAATTCCTCTCTGAG...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGAGAGAACTGTTTCTTaGGAAACAAACTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHERTVS*ETNWGI
Trigger: GATACCCCAGTTTGTTTCTCAAGAAACAGTTCTCTC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGCAGCAGCAGCAGCTTaGTGTAAACTACTTACTATG +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSAAAAA*CKLLTM
Trigger: CATAGTAAGTAGTTTACATCAAGCTGCTGCTGCTGC...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTCGAATCTCTAGATCCTaGTCTAGAAGGTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLARISRS*SRRCFT
Trigger: AGTAAAGCACCTTCTAGATCAGGATCTAGAGATTCG...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGACCATTTGTAGCACCTaGGGAAACGGTCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQTICST*GNGLRS
Trigger: ACTTCTCAGACCGTTTCCTCAGGTGCTACAAATGGT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTACTGGAGTTGGGATCTaGGATGGCCGAGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPTGVGI*DGRAEV
Trigger: CACTTCAGCTCGGCCATCTCAGATCCCAACTCCAGT...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAGCATGGCAAAGTGCTaGTTATACTTCACTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLSMAKC*LYFTAE
Trigger: CTCAGCAGTGAAGTATAATCAGCACTTTGCCATGCT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCGCTTCATATTCCAATTaGCTTCTGGTCATATCTGTT +
Preference number: 4 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVASYSN*LLVISV
Trigger: AACAGATATGACCAGAAGGCAATTGGAATATGAAGC...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGGCTATTCTTCGCTGTaGTCGTTTTTCCATATCCTG +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSGYSSL*SFFHIL
Trigger: CAGGATATGGAAAAACGAGCACAGCGAAGAATAGCC...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCAATGATGTTGTGGAGTaGTGCACTGGCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSNDVVE*CTGPGP
Trigger: CGGGCCAGGGCCAGTGCAGCACTCCACAACATCATT...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCAGCTTTATTCTCAGTaGAATGTGCTGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPQLYSQ*NVLTNS
Trigger: GGAATTTGTCAGCACATTGCACTGAGAATAAAGCTG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAACCAAAAATGCAAGTaGACCATCTACAGCACATAT +
Preference number: 4 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGNQKCK*TIYSTY
Trigger: ATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTTGCTGGATGGTAGTTaGCTAGACCAATTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLLDGS*LDQFRV
Trigger: AACGCGGAATTGGTCTAGGCAACTACCATCCAGCAA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACAGCAGTGGTGGAGATCTaGAAACCTCGCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: FCYLQGISRICFLCRLITAVVEI*KPRFEE
Trigger: TTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGC...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTGGAGAAACACATTCCTaGTGTCCAAAATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCGETHS*CPKCGW
Trigger: CCAACCACATTTTGGACAGCAGGAATGTGTTTCTCC...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACAGATTTGGTTCTAGGGTaGTGTGACACTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: FCYLQGISRICFLCRLITDLVLG*CDTAGT
Trigger: AGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATC...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATAAACTAGAACCCTaGAGTCTGCTGGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLDKLEP*SLLDLV
Trigger: AACCAAATCCAGCAGACTGCAGGGTTCTAGTTTATC...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGATAAACTAGAACCCTaGAGTCTGCTGGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQDKLEP*SLLDLV
Trigger: AACCAAATCCAGCAGACTGCAGGGTTCTAGTTTATC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGAGGTGTTTTACTTCTaGTTGGTGGCATGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLEVFYF*LVAWFV
Trigger: GACAAACCATGCCACCAAGCAGAAGTAAAACACCTC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAACTGCAGCATTTACTaGAGCTTGCTTAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCNCSIY*SLLRST
Trigger: AGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCTGGACCCTCTGAACTaGAGCATTTACTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGLDPLN*SIYCSL
Trigger: CAAGCTGCAGTAAATGCTGCAGTTCAGAGGGTCCAG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGAATATCACCTTCCTCTaGTTTATTGTCATCCAATTC +
Preference number: 4 (lower is better)
Translates to: VDFWVSEHHFWREISLLKNITFL*FIVIQF
Trigger: GAATTGGATGACAATAAAGCAGAGGAAGGTGATATT...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCCTCGATTTATTGGCTaGTTTGCAATAGCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHPRFIG*FAIACV
Trigger: GACACAAGCTATTGCAAAGCAGCCAATAAATCGAGG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCCTCGATTTATTGGCTaGTTTGCAATAGCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTPRFIG*FAIACV
Trigger: GACACAAGCTATTGCAAAGCAGCCAATAAATCGAGG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGACTTTTCATCAGTTGCTaGCCCTCTGTCTGGTATGTC +
Preference number: 4 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRLFISC*PSVWYV
Trigger: GACATACCAGACAGAGGGGCAGCAACTGATGAAAAG...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGAGCTTATACATTCCTaGAACAGGTCATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTELIHS*NRSSSE
Trigger: CTCTGAAGATGACCTGTTGCAGGAATGTATAAGCTC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGATATACAGCTGTCTTaGGAGCTAGACATAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLDIQLS*ELDIAS
Trigger: GCTAGCTATGTCTAGCTCCCAAGACAGCTGTATATC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGTCCTGGTCCATGCCTaGTTCATGAGCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEVLVHA*FMSFLP
Trigger: TGGCAGGAAGCTCATGAACCAGGCATGGACCAGGAC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTATGTTCAACAGGAGCTaGCATTGGATTTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTMFNRS*HWIFVL
Trigger: CAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCATGTTCAACAGGAGCTaGCATTGGATTTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAMFNRS*HWIFVL
Trigger: CAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCTTTCAGATTTTAGTTaGGCCACAAGTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLSDFS*ATSALM
Trigger: CATGAGAGCACTTGTGGCCCAACTAAAATCTGAAAG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTATGACTTTGGCAATCTaGGCTGCAGTGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFMTLAI*AAVVEI
Trigger: GATCTCCACCACTGCAGCCCAGATTGCCAAAGTCAT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCATGACTTTGGCAATCTaGGCTGCAGTGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGMTLAI*AAVVEI
Trigger: GATCTCCACCACTGCAGCCCAGATTGCCAAAGTCAT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTAATGACTTTGGCAATCTaGGCTGCAGTGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLMTLAI*AAVVEI
Trigger: GATCTCCACCACTGCAGCCCAGATTGCCAAAGTCAT...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTGTTTGAATGTGTATaGGCAGCAGAGCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTVFECV*AAELLL
Trigger: TAGAAGAAGCTCTGCTGCCCATACACATTCAAACAC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCAACAGCTTTGTGCCTaGCTGATTCTGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHQQLCA*LILKIN
Trigger: GTTTATCTTCAGAATCAGCCAGGCACAAAGCTGTTG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACGTTCAGGTGGACTTTTaGGTGTCTGAGCACCACTTT +
Preference number: 4 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDVQVDF*VSEHHF
Trigger: AAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAAC...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATCTGCTAAACATGAGTaGGGTCTCCTGAACATAGTG +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLSAKHE*GLLNIV
Trigger: CACTATGTTCAGGAGACCCCACTCATGTTTAGCAGA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACTCTGAACGGAGCTaGCAATCGAACGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFHSERS*QSNDSQ
Trigger: TTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTG...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCATTTACTTCTGCTTGGTaGCATGGTTTGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPFTSAW*HGLSRA
Trigger: AGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAA...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAGCTGTTTGAGGAGGTaGTGGAGGTGTTTTACTTCT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLSCLRR*WRCFTS
Trigger: AGAAGTAAAACACCTCCACCACCTCCTCAAACAGCT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTAGCTGTTTGAGGAGGTaGTGGAGGTGTTTTACTTCT +
Preference number: 4 (lower is better)
Translates to: LLSKMWLELEVFIISALSSCLRR*WRCFTS
Trigger: AGAAGTAAAACACCTCCACCACCTCCTCAAACAGCT...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGATGCTTGCTGGACCTaGTCCATTATCTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQDACWT*SIIFFT
Trigger: TGTGAAAAAGATAATGGACCAGGTCCAGCAAGCATC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCTGACCTCGATTTATTaGCTGCTTTGCAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTALTSIY*LLCNSL
Trigger: CAAGCTATTGCAAAGCAGCCAATAAATCGAGGTCAG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTGTCTGGTATGTCTTTaGATGACTGGGGAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCCLVCL*MTGEKW
Trigger: CCACTTTTCCCCAGTCATCCAAAGACATACCAGACA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATGTCTGGTATGTCTTTaGATGACTGGGGAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSCLVCL*MTGEKW
Trigger: CCACTTTTCCCCAGTCATCCAAAGACATACCAGACA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTGTAAACTACTTACTATaGAATTTGCACCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ATSALMQPFIEHSVALLAVNYLL*NLHLPE
Trigger: TTCAGGAAGGTGCAAATTCCATAGTAAGTAGTTTAC...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTATTTCAGGGAAAGGATaGAATCTGAATCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPISGKG*NLNQTK
Trigger: CTTCGTCTGATTCAGATTCCATCCTTTCCCTGAAAT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATGCTATTTCGAACTCCTaGAATATGAATCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: GALLDPPIWDVCLATGLNAISNS*NMNHCP
Trigger: AGGACAATGATTCATATTCCAGGAGTTCGAAATAGC...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATTGGTAAGGTTCTGTTaGCTCATCTGTCTACCTGGA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLLVRFC*LICLPG
Trigger: TCCAGGTAGACAGATGAGCCAACAGAACCTTACCAA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCGGCAGACTCACTTCTTaGAATACTACTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAGRLTS*NTTGIL
Trigger: AAGAATGCCAGTAGTATTCCAAGAAGTGAGTCTGCC...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACATCATGGCGCTTTGCTaGTCTTCCATCATTATACTC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHIMALC*SSIIIL
Trigger: GAGTATAATGATGGAAGACCAGCAAAGCGCCATGAT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTGACTTTGGGTTCCACTaGATTCTGTGCTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCDFGFH*ILCCQF
Trigger: AAACTGACAGCACAGAATCCAGTGGAACCCAAAGTC...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAATCCTTGGCTACCCTTaGACCTGCCTCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEILGYP*TCLLLF
Trigger: AAAGAGGAGGAGGCAGGTCCAAGGGTAGCCAAGGAT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508376.6
3UTR CAA 72 bp GTGGAGGTAATTTTGAAGCAGTCTGGGCTGGCTTTTTaGCTTTACGTGATGACTTTGTTGGCATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VEVILKQSGLAF*LYVMTLLAWQK
Trigger: TTTCTGCCATGCCAACAAAGTCATCACGTAAAGCAAAAAAGCCAGCCCAGACTGCTTCAAAATTACCTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 72 bp TTTGTGATGGTAGAAGTTTGTACACAGGCAGCTGACTaGGTTTCCTTGCCACAGGTGGAGGTAATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: FVMVEVCTQAAD*VSLPQVEVILK
Trigger: CTTCAAAATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTGTACAAACTTCTACCATCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 72 bp CTCCTGGAATATGAATCATTGTCCTGCCTCGAGAGATaGAAGGCATGTTTGCTTGAAGGGGCTGTTTCATTT +
Preference number: 4 (lower is better)
Translates to: LLEYESLSCLER*KACLLEGAVSF
Trigger: AAATGAAACAGCCCCTTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGGACAATGATTCATATTCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAACCTTGGTTCCCAGATaGCTTGTCAGCCTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPETLVPR*LVSLRG
Trigger: ACCTCGAAGGCTGACAAGTCATCTGGGAACCAAGGT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTCATCAGGCTGTGAGTaGATGATGTTGTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFSSGCE*MMLWSA
Trigger: AGCACTCCACAACATCATTCACTCACAGCCTGATGA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCTTGTCATCAGGCTGTaGGTGAATGATGTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGLVIRL*VNDVVE
Trigger: CTCCACAACATCATTCACTCACAGCCTGATGACAAG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCAAAGAGATGGCAAGCTTaGGCCAGGAGACATAATATT +
Preference number: 4 (lower is better)
Translates to: RMESESDEACLDKHAAAAKRWQA*ARRHNI
Trigger: AATATTATGTCTCCTGGCTCAAGCTTGCCATCTCTT...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGTTTTGTTTCCTAACATaGAGAGATGGCAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLFCFLT*RDGKLE
Trigger: CTCAAGCTTGCCATCTCTTCATGTTAGGAAACAAAA...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTGTTTCTGATAAGTGCTaGGCATCTAATTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLAVSDKC*ASNSAS
Trigger: AGAAGCAGAATTAGATGCTCAGCACTTATCAGAAAC...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACCTGCAAACCTCGCTTTaGAGAAGTTCCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDLQTSL*RSSWIF
Trigger: GAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAG...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCCATCTTTCATTCTGTaGAGGACTTTGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQPSFIL*RTLPSR
Trigger: TCTGGAAGGCAAAGTCCTTCACAGAATGAAAGATGG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAATGTGGTTGGAACTTaGGGTGTTTATCATCAGTGC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLNVVGT*GVYHQC
Trigger: GCACTGATGATAAACACCTCAAGTTCCAACCACATT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGGGAGATTTCGCTCCTaGAGAAAATTCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLGRFRS*RKFNSF
Trigger: AAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGAAGGTATGGTTACAGATaGGGTTTTTCCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRRYGYR*GFSSLS
Trigger: GCTCAAGGAGGAAAAACCTCATCTGTAACCATACCT...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGTTCTTACCATCTAACTaGTTTTTGTTGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMFLPSN*FLLGAE
Trigger: TTCTGCACCCAACAAAAATCAGTTAGATGGTAAGAA...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCGTGTAATGATGAGGTaGATCAAAAGCAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTARVMMR*IKSKTS
Trigger: GGAAGTTTTGCTTTTGATTCACCTCATCATTACACG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGAGAAGGTGCTTTACTTaGCCCACCTATTTGGGATGT +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELRRCFT*PTYLGC
Trigger: ACATCCCAAATAGGTGGGTCAAGTAAAGCACCTTCT...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTGGATTTGCCTTTTCTaGAACACTGTCAATCACCGG +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQWICLF*NTVNHR
Trigger: CCGGTGATTGACAGTGTTTCAGAAAAGGCAAATCCA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATCAGGGGCATCCACCTaGATAAAGGAGTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPESGAST*IKEFRR
Trigger: TCGCCTGAACTCCTTTATTCAGGTGGATGCCCCTGA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGGAACCATATTACTGTaGATTTCACAGCCACATGAT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQGTILL*ISQPHD
Trigger: ATCATGTGGCTGTGAAATTCACAGTAATATGGTTCC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACATTATACTTCACTGCTaGGATCTTGCCCTAACATAC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHIILHC*DLALTY
Trigger: GTATGTTAGGGCAAGATCTCAGCAGTGAAGTATAAT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTATTATACTTCACTGCTaGGATCTTGCCCTAACATAC +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTIILHC*DLALTY
Trigger: GTATGTTAGGGCAAGATCTCAGCAGTGAAGTATAAT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTTACGCTTTTGAGGGTTaGTTCCTAGTTCATTCATTG +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLAYAFEG*FLVHSL
Trigger: CAATGAATGAACTAGGAATCAACCCTCAAAAGCGTA...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502371.2
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGCTTCATATTCCAATTaGCTTCTGGTCATATCTGTT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPASYSN*LLVISV
Trigger: AACAGATATGACCAGAAGGCAATTGGAATATGAAGC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCTCGGATTTCACGCCTaGCTCTCTTGTCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPLGFHA*LSCHQA
Trigger: AGCCTGATGACAAGAGAGGCAGGCGTGAAATCCGAG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTTTTGTCCTGGTCCATaGCTGGTTCATGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGFCPGP*LVHELP
Trigger: AGGAAGCTCATGAACCAGGCATGGACCAGGACAAAA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGACACTCGCAATAACCTaGTGTAAGTCTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLTLAIT*CKSSLS
Trigger: TGAAAGTGAAGACTTACAGCAGGTTATTGCGAGTGT...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTCAGCTTTATTCTCAGTaGAATGTGCTGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLAQLYSQ*NVLTNS
Trigger: GGAATTTGTCAGCACATTGCACTGAGAATAAAGCTG...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCTTCTCTCTTAGGATTTaGCTGTGGTCCTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCFSLRI*LWSSFV
Trigger: TACAAATGAGGACCACAGGCAAATCCTAAGAGAGAA...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACTTCTCTCTTAGGATTTaGCTGTGGTCCTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHFSLRI*LWSSFV
Trigger: TACAAATGAGGACCACAGGCAAATCCTAAGAGAGAA...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTTTCTCTCTTAGGATTTaGCTGTGGTCCTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTFSLRI*LWSSFV
Trigger: TACAAATGAGGACCACAGGCAAATCCTAAGAGAGAA...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGCAGTGGTGGAGATCTaGAAACCTCGCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGAVVEI*KPRFEE
Trigger: TTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACGCAGTGGTGGAGATCTaGAAACCTCGCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNAVVEI*KPRFEE
Trigger: TTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGC...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACAGAGCTTCTTCTAAGTaGATTTCTCTCATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHRASSK*ISLICH
Trigger: GTGACAGATGAGAGAAATGCACTTAGAAGAAGCTCT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGGTGTTTATCATCAGTaGTCTCAGTATAAACAGGAT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPGVYHQ*SQYKQD
Trigger: ATCCTGTTTATACTGAGAGCACTGATGATAAACACC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGGAGAAACACATTCCTaGTGTCCAAAATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQGETHS*CPKCGW
Trigger: CCAACCACATTTTGGACAGCAGGAATGTGTTTCTCC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATGGACGTATTCTCACTaGTTGAAGACATATGTTCGG +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLWTYSH*LKTYVR
Trigger: CCGAACATATGTCTTCAAGCAGTGAGAATACGTCCA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACGATTTGGTTCTAGGGTaGTGTGACACTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNDLVLG*CDTAGT
Trigger: AGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATC...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAATTCAACAGCTTTGTaGCTGGCTGATTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQNSTAL*LADSED
Trigger: ATCTTCAGAATCAGCCAGGCACAAAGCTGTTGAATT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTAATTCAACAGCTTTGTaGCTGGCTGATTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTNSTAL*LADSED
Trigger: ATCTTCAGAATCAGCCAGGCACAAAGCTGTTGAATT...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCACTTACCATTCCACTaGATGGTTCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGHLPFH*MVHSER
Trigger: CCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCTTTTCATCAGTTGCTaGCCCTCTGTCTGGTATGTC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGLFISC*PSVWYV
Trigger: GACATACCAGACAGAGGGGCAGCAACTGATGAAAAG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATATGAATCATTGTCCTaGCTCGAGAGATTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLYESLS*LERLKA
Trigger: TGCCTTCAATCTCTCGAGGCAGGACAATGATTCATA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTTCAGAATGAGACCGTaGAATATCATGGCGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQFRMRP*NIMALC
Trigger: GCAAAGCGCCATGATATTGCACGGTCTCATTCTGAA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAATGGCCGAGCTGAAGTaGTATCTGCGCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEMAELK*YLRCFS
Trigger: GGAAAAGCAGCGCAGATAGCACTTCAGCTCGGCCAT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTTCCACTGGATTCTGTaGTGTCAGTTTTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCFHWIL*CQFWNL
Trigger: GAGATTCCAAAACTGACAGCACAGAATCCAGTGGAA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCATCAGTTTCATTCATaGAGTAAAGCAAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAHQFHS*SKAKQA
Trigger: AGCCTGCTTTGCTTTACTGCATGAATGAAACTGATG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCATGTCAGACCCAGTTaGAACAAGAAGATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGHVRPS*NKKMKG
Trigger: CCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGTGTTTACAAAGTGGTaGAGTAGACACAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQVFTKW*SRHSTG
Trigger: GCCTGTACTGTGTCTACTGCACCACTTTGTAAACAC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp GATTGGAATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGGAGAAGGCAACTGAGTaGTTCACCTTCCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: DWNYLLALVEDLSSPSSVEKATE*FTFLTN
Trigger: GTTGGTGAGGAAGGTGAAGCACTCAGTTGCCTTCTC...CACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTTCACATCAGCCATCTaGAGCGGTTTTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGFTSAI*SGFVSS
Trigger: AGAGGAGACAAAACCGCTGCAGATGGCTGATGTGAA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTCTTTTGGCCACCAATaGATGTGTCCCCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFSFGHQ*MCPHFR
Trigger: TCGGAAATGGGGACACATGCATTGGTGGCCAAAAGA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508376.6
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACTTAGGATTTGCCTGTaGTCCTCATTTGTAGCTATC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLLRICL*SSFVAI
Trigger: GATAGCTACAAATGAGGACCACAGGCAAATCCTAAG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTGTCCAAAATGTGGTTaGAACTTGAGGTGTTTATCA +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPCPKCG*NLRCLS
Trigger: TGATAAACACCTCAAGTTCCAACCACATTTTGGACA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTTGTTTCTGAACCATTaGCTCCCCGTGACCTGTATG +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFLFLNH*LPVTCM
Trigger: CATACAGGTCACGGGGAGCCAATGGTTCAGAAACAA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTACTCTGTGCAGAACTTaGATGGAGCTGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFTLCRT*MELILP
Trigger: AGGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACAAAGAAACTTTGCAAGTaGCAGCCTTTTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FCYLQGISRICFLCRLITKKLCK*QPFEAD
Trigger: GTCAGCCTCAAAAGGCTGCCACTTGCAAAGTTTCTT...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTCAACAGCTTTGTGCCTaGCTGATTCTGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: LLSKMWLELEVFIISALSQQLCA*LILKIN
Trigger: GTTTATCTTCAGAATCAGCCAGGCACAAAGCTGTTG...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTCTGCTAAACATGAGTaGGGTCTCCTGAACATAGTG +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQSAKHE*GLLNIV
Trigger: CACTATGTTCAGGAGACCCCACTCATGTTTAGCAGA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTGTTTGAGGAGGTGGTaGAGGTGTTTTACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQCLRRW*RCFTSA
Trigger: AGCAGAAGTAAAACACCTCCACCACCTCCTCAAACA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCATGTTTGAGGAGGTGGTaGAGGTGTTTTACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPCLRRW*RCFTSA
Trigger: AGCAGAAGTAAAACACCTCCACCACCTCCTCAAACA...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTACAAGAAAATCCATCTaGAGTACTTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTTRKSI*STFRGK
Trigger: TTTGCCACGGAAAGTACTCCAGATGGATTTTCTTGT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCAATCTTTCTGTATAAATaGCTCATCGAGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RMESESDEACLDKHAAAAIFLYK*LIEAQS
Trigger: GCTCTGAGCCTCGATGAGCCATTTATACAGAAAGAT...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGATGCTTGCTGGACCTaGTCCATTATCTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLDACWT*SIIFFT
Trigger: TGTGAAAAAGATAATGGACCAGGTCCAGCAAGCATC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTTATTAGCTGATTGTTaGTTGGAGGTTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPLLADC*LEVSSV
Trigger: CACAGAACTAACCTCCAACCAACAATCAGCTAATAA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTATGACTGGGGAAAAGTaGATTGTTTCTGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTMTGEK*IVSEVW
Trigger: CCATACTTCAGAAACAATCCACTTTTCCCCAGTCAT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAATGACTGGGGAAAAGTaGATTGTTTCTGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQMTGEK*IVSEVW
Trigger: CCATACTTCAGAAACAATCCACTTTTCCCCAGTCAT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTTTGGGATGTCTGCCTaGCAACAGGGCTTAATTCTG +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFFGMSA*QQGLIL
Trigger: CAGAATTAAGCCCTGTTGCCAGGCAGACATCCCAAA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTTGGTAAGGTTCTGTTaGCTCATCTGTCTACCTGGA +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLVRFC*LICLPG
Trigger: TCCAGGTAGACAGATGAGCCAACAGAACCTTACCAA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAACTGGAGTTTGTGCCTaGGACCTAGTGGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPETGVCA*DLVGEA
Trigger: AGCTTCTCCCACTAGGTCCCAGGCACAAACTCCAGT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGAACAGACGAATGTGTaGATAGAGACATATCAGGAA +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQEQTNV*IETYQE
Trigger: TTCCTGATATGTCTCTATCCACACATTCGTCTGTTC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGAACAGACGAATGTGTaGATAGAGACATATCAGGAA +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHEQTNV*IETYQE
Trigger: TTCCTGATATGTCTCTATCCACACATTCGTCTGTTC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTATCATGGCGCTTTGCTaGTCTTCCATCATTATACTC +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCIMALC*SSIIIL
Trigger: GAGTATAATGATGGAAGACCAGCAAAGCGCCATGAT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGCTTTTCCTAGGGCTTaGGTTGTAATTAAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHAFPRA*VVIKRS
Trigger: ACTCCTTTTAATTACAACCCAAGCCCTAGGAAAAGC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR CAA 72 bp GTATGGAGAAACACATTCCTGCTGTCCAAAATGTGGTaGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VWRNTFLLSKMW*ELEVFIISALS
Trigger: ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGAATGTGTTTCTCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CAA 72 bp AGTAGGTGCTTTATTTTTAGGTACTTCTCGCTTGGTTaGAGCTGTTTGAGGAGGTGGTGGAGGTGTTTTACT +
Preference number: 4 (lower is better)
Translates to: SRCFIFRYFSLG*SCLRRWWRCFT
Trigger: AGTAAAACACCTCCACCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTACCTAAAAATAAAGCACCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
3UTR CAA 72 bp TTGAGGAGCTATTTCGAACTCCTGGAATATGAATCATaGTCCTGCCTCGAGAGATTGAAGGCATGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LRSYFELLEYES*SCLERLKACLL
Trigger: AAGCAAACATGCCTTCAATCTCTCGAGGCAGGACAATGATTCATATTCCAGGAGTTCGAAATAGCTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCAACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPTCFNN*SYEAAA
Trigger: GGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGT...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCTTCCATCGCAACTCTaGTTTGCCTTGCTTCATATT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLPSQL*FALLHI
Trigger: AATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCAACCTTGGTTCCCAGATaGCTTGTCAGCCTTCGAGGT +
Preference number: 4 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSTLVPR*LVSLRG
Trigger: ACCTCGAAGGCTGACAAGTCATCTGGGAACCAAGGT...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCCAGGCTGTGAGTGAATaGTGTTGTGGAGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSQAVSE*CCGVLH
Trigger: GTGCAGCACTCCACAACATCATTCACTCACAGCCTG...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATCATCAGGCTGTGAGTaGATGATGTTGTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHESSGCE*MMLWSA
Trigger: AGCACTCCACAACATCATTCACTCACAGCCTGATGA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTTTCTGATAAGTGCTaGGCATCTAATTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSVSDKC*ASNSAS
Trigger: AGAAGCAGAATTAGATGCTCAGCACTTATCAGAAAC...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAGTATTCAAATATGGTaGAAGGACAGTCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCSIQIW*KDSHVA
Trigger: GGCAACATGACTGTCCTTTCACCATATTTGAATACT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGAAATTGTAAGTGTTTaGATGTGTATGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSEIVSV*MCMGSR
Trigger: TCTGCTGCCCATACACATTCAAACACTTACAATTTC...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTTGTACTTTGATTCCTTaGTTGTCTTTGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTCTLIP*LSLLTL
Trigger: CAAAGTGAGCAAAGACAATCAAGGAATCAAAGTACA...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTCGTATTCTCACTGCTTaGAGACATATGTTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: LLSKMWLELEVFIISALSRILTA*RHMFGF
Trigger: AAAACCGAACATATGTCTTCAAGCAGTGAGAATACG...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCAGGACTTTTGGGTGTCTaGGCACCACTTTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSGLLGV*APLLEG
Trigger: TCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCC...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCCTCAAAACTATCAAGTaGACTGACAGAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCLKTIK*TDRSTS
Trigger: AGATGTACTTCTGTCAGTTCACTTGATAGTTTTGAG...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACCATTGTCATTTTCCTaGACTGGAGGCATTATTCTT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLPLSFS*TGGIIL
Trigger: AAGAATAATGCCTCCAGTTCAGGAAAATGACAATGG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTTCTTTAGGCTGCTCTaGTTCTGTTTCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCFFRLL*FCFIPI
Trigger: AATGGGAATGAAACAGAATCAGAGCAGCCTAAAGAA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCAGGTATGGTTACAGATaGGGTTTTTCCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGRYGYR*GFSSLS
Trigger: GCTCAAGGAGGAAAAACCTCATCTGTAACCATACCT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCAAAGAATCATTTCGTaGAAAACAGTAAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTQRIIS*KTVRSS
Trigger: GGAACTCCTTACTGTTTTTCACGAAATGATTCTTTG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATACGAACTCCTGGAATATaGATCATTGTCCTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIRTPGI*IIVLPR
Trigger: TCGAGGCAGGACAATGATTCATATTCCAGGAGTTCG...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCAACAGGACTTGTACTTaGGGAGCTATTTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGNRTCT*GAISNS
Trigger: GGAGTTCGAAATAGCTCCTCAAGTACAAGTCCTGTT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCTCTACCAGGGGAAATTaGGTTTCGGCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSSTRGN*VSARRL
Trigger: CAGTCTCCTGGCCGAAACTCAATTTCCCCTGGTAGA...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR TCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTTTACCATTATTCATCTaGTTTAGTCCTTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLPLFI*FSPLEA
Trigger: TGCCTCCAAAGGACTAAATCAGATGAATAATGGTAA...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGAAGGACTTTCAGAATaGGACCGTGCAATATCATGG +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGEGLSE*DRAISW
Trigger: CCATGATATTGCACGGTCTCATTCTGAAAGTCCTTC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTACGTTTCCAGGTTCCTaGCCTATTGATTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFTFPGS*PIDWKS
Trigger: AGACTTCCAATCAATAGGTCAGGAACCTGGAAACGT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTGGATTTGCCTTTTCTaGAACACTGTCAATCACCGG +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFWICLF*NTVNHR
Trigger: CCGGTGATTGACAGTGTTTCAGAAAAGGCAAATCCA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTTGTCAGCCTTCGAGGTaGAGAGTGTGTGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPCQPSR*RVCATR
Trigger: TCTAGTAGCACACACTCTGCACCTCGAAGGCTGACA...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCCTCGGATTTCACGCCTaGCTCTCTTGTCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSLGFHA*LSCHQA
Trigger: AGCCTGATGACAAGAGAGGCAGGCGTGAAATCCGAG...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAAGCACATTCCATCAATaGTTTCACACTTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSSTFHQ*FHTSNF
Trigger: GAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGCT...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACAACCAAAAATGCAAGTaGACCATCTACAGCACATAT +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHNQKCK*TIYSTY
Trigger: ATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAGAGCTTCTTCTAAGTaGATTTCTCTCATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLRASSK*ISLICH
Trigger: GTGACAGATGAGAGAAATGCACTTAGAAGAAGCTCT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGGTGTTTATCATCAGTaGTCTCAGTATAAACAGGAT +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLGVYHQ*SQYKQD
Trigger: ATCCTGTTTATACTGAGAGCACTGATGATAAACACC...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACAGGTATTAGCAGAATCTaGTTCCTGTGTCGTCTGATT +
Preference number: 4 (lower is better)
Translates to: FCYLQGISRICFLCRLITGISRI*FLCRLI
Trigger: AATCAGACGACACAGGAAGCAGATTCTGCTAATACC...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAATTCAACAGCTTTGTaGCTGGCTGATTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLNSTAL*LADSED
Trigger: ATCTTCAGAATCAGCCAGGCACAAAGCTGTTGAATT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTAACTGCAGCATTTACTaGAGCTTGCTTAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFNCSIY*SLLRST
Trigger: AGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTTTGATTCTTTAGGCTaGTCTGATTCTGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: FVSEPLAPRDLYGETHSCFDSLG*SDSVSF
Trigger: GAATGAAACAGAATCAGAGCAGCCTAAAGAATCAAA...GCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGAAGACGCAGATGCTTaGTGGACCTGGTCCATTATC +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEEDADA*WTWSII
Trigger: GATAATGGACCAGGTCCAGCAAGCATCTGCGTCTTC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTACTGATTTTTGTTGGGTaGAGAAGAAGACGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLLIFVG*RRRRRC
Trigger: GCATCTGCGTCTTCTTCTGCACCCAACAAAAATCAG...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGATCTTCACCTAATATaGCACCCATATTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQDLHLI*HPYFWD
Trigger: GTCCCAGAAATATGGGTGGCATATTAGGTGAAGATC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGTATGAATCATTGTCCTaGCTCGAGAGATTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELYESLS*LERLKA
Trigger: TGCCTTCAATCTCTCGAGGCAGGACAATGATTCATA...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGGTCTACTTAATGGTTaGTGGGCAGGTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEGLLNG*WAGLEG
Trigger: CCCTTCAAGACCTGCCCAGCAACCATTAAGTAGACC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTCAGGAATAGATAAGTaGCAACGCATGGAATGGTTA +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCSGIDK*QRMEWL
Trigger: TAACCATTCCATGCGTTGGCACTTATCTATTCCTGA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCTAGGCTGCTTGCATTaGTATTACATGAATTTACTT +
Preference number: 4 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPLGCLH*YYMNLL
Trigger: AAGTAAATTCATGTAATAGCAATGCAAGCAGCCTAG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACATGTCAGACCCAGTTaGAACAAGAAGATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEHVRPS*NKKMKG
Trigger: CCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCGATTTGCTGAATTCTaGCTATTCTTCGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGRFAEF*LFFAVL
Trigger: GAGCACAGCGAAGAATAGCCAGAATTCAGCAAATCG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGAACACTGGCTGTTTCATaGTCCATTCGTGTAGTTGAA +
Preference number: 4 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRTLAVS*SIRVVE
Trigger: TTCAACTACACGAATGGACCATGAAACAGCCAGTGT...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACAATGTTCAACAGGAGCTaGCATTGGATTTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FCYLQGISRICFLCRLITMFNRS*HWIFVL
Trigger: CAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGCAATAATTCTGCAATaGCCTGTAGTCCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGAIILQ*PVVPLV
Trigger: AACTAGGGGGACTACAGGCCATTGCAGAATTATTGC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGTGTTTGAATGTGTATaGGCAGCAGAGCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQVFECV*AAELLL
Trigger: TAGAAGAAGCTCTGCTGCCCATACACATTCAAACAC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGCACTATGTATTTTATaGGCTAGGTCGGCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGALCIL*ARSAGY
Trigger: ATACCCAGCCGACCTAGCCCATAAAATACATAGTGC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCGCACTATGTATTTTATaGGCTAGGTCGGCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLALCIL*ARSAGY
Trigger: ATACCCAGCCGACCTAGCCCATAAAATACATAGTGC...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAACTCTGTGCAGAACTTaGATGGAGCTGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMITLCRT*MELILP
Trigger: AGGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGT...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCAAGAAACTTTGCAAGTaGCAGCCTTTTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGKKLCK*QPFEAD
Trigger: GTCAGCCTCAAAAGGCTGCCACTTGCAAAGTTTCTT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATACCATTCCACTGCATaGTTCACTCTGAACGGAGCT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEYHSTA*FTLNGA
Trigger: AGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCAGCTGTTTGAGGAGGTaGTGGAGGTGTTTTACTTCT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGSCLRR*WRCFTS
Trigger: AGAAGTAAAACACCTCCACCACCTCCTCAAACAGCT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAACAAGAAAATCCATCTaGAGTACTTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLTRKSI*STFRGK
Trigger: TTTGCCACGGAAAGTACTCCAGATGGATTTTCTTGT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGATCTTTCTGTATAAATaGCTCATCGAGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQIFLYK*LIEAQS
Trigger: GCTCTGAGCCTCGATGAGCCATTTATACAGAAAGAT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACAAACTAACATGCTTTTaGGGTTGCAACCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHKLTCF*GCNLFC
Trigger: ACAAAACAGGTTGCAACCCCAAAAGCATGTTAGTTT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGAAACTAACATGCTTTTaGGGTTGCAACCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLKLTCF*GCNLFC
Trigger: ACAAAACAGGTTGCAACCCCAAAAGCATGTTAGTTT...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAAACACAATACACCCGTaGCATATCATCCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPENTIHP*HIIPRC
Trigger: ACACCGGGGGATGATATGCCACGGGTGTATTGTGTT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCATCCAATTCAGGTATaGTTACAGATGAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAHPIQV*LQMRFF
Trigger: GAAAAACCTCATCTGTAACCATACCTGAATTGGATG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTCATCCAATTCAGGTATaGTTACAGATGAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLAHPIQV*LQMRFF
Trigger: GAAAAACCTCATCTGTAACCATACCTGAATTGGATG...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCGAGGTTAGTTCTGTGTaGCTGGTAACTTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLEVSSV*LVTLAS
Trigger: AGAGGCTAAAGTTACCAGCCACACAGAACTAACCTC...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAATTATTAGCTGATTGTTaGTTGGAGGTTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQLLADC*LEVSSV
Trigger: CACAGAACTAACCTCCAACCAACAATCAGCTAATAA...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCAATGACTGGGGAAAAGTaGATTGTTTCTGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: RMESESDEACLDKHAAAAMTGEK*IVSEVW
Trigger: CCATACTTCAGAAACAATCCACTTTTCCCCAGTCAT...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACAGGGGCTGTTTCATTTaGCCTGAAATTTCTGAATTA +
Preference number: 4 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHRGCFI*PEISEL
Trigger: TAATTCAGAAATTTCAGGCCAAATGAAACAGCCCCT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTAGGGGCTGTTTCATTTaGCCTGAAATTTCTGAATTA +
Preference number: 4 (lower is better)
Translates to: LLEGDFAPEENSTALCLARGCFI*PEISEL
Trigger: TAATTCAGAAATTTCAGGCCAAATGAAACAGCCCCT...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTTTGATGAAAGTTGACTaGCGTACTAATACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLMKVD*RTNTGL
Trigger: AAGACCTGTATTAGTACGCCAGTCAACTTTCATCAA...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGCTGCTAGAACTGAATaGGGTACGTTCCACTATAGA +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFAARTE*GTFHYR
Trigger: TCTATAGTGGAACGTACCCCATTCAGTTCTAGCAGC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTGCCAACGCATGGAATaGTTAAGTGGCAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGCQRME*LSGNSL
Trigger: AAGACTGTTGCCACTTAACCATTCCATGCGTTGGCA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTGCCAACGCATGGAATaGTTAAGTGGCAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFCQRME*LSGNSL
Trigger: AAGACTGTTGCCACTTAACCATTCCATGCGTTGGCA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR CAA 72 bp ATACAGGGTGATAAAAAGTGTTCATGTCAGACCCAGTaGCAACAAGAAGATGAAGGGGCAAGACAGTTTACA +
Preference number: 4 (lower is better)
Translates to: IQGDKKCSCQTQ*QQEDEGARQFT
Trigger: TGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACTTTTTATCACCCTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGTCFNN*SYEAAA
Trigger: GGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCCCTCTTCTTGGAAATaGACCCATAGGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPPSSWK*THRNRT
Trigger: AGTCCTGTTCCTATGGGTTCATTTCCAAGAAGAGGG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCATCAGCAAGAAGCAATaGCCTCTCTTTCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GISRICFLCRLITSYFIFISKKQ*PLFLKF
Trigger: GAACTTGAGAAAGAGAGGTCATTGCTTCTTGCTGAT...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAATATCATCCTTATCATaGGTACCAAGCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLISSLS*VPSIDN
Trigger: GTTGTCAATGCTTGGTACTCATGATAAGGATGATAT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAATCTGTTCCAAAAGATaGAGGACTCGGATTTCACGC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEICSKR*RTRISR
Trigger: GCGTGAAATCCGAGTCCTTCATCTTTTGGAACAGAT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATTCCACATGCATTACTaGCTATTGTCAAACTATGAG +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLFHMHY*LLSNYE
Trigger: CTCATAGTTTGACAATAGTCAGTAATGCATGTGGAA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQFRISC*EIPQSS
Trigger: GGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTAGAGGTATGAATGGCTaGCACTTCTTCCATGACTTT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFRGMNG*HFFHDF
Trigger: AAAGTCATGGAAGAAGTGTCAGCCATTCATACCTCT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCGTATTCTCACTGCTTaGAGACATATGTTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQRILTA*RHMFGF
Trigger: AAAACCGAACATATGTCTTCAAGCAGTGAGAATACG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGCTTCCTGTGTCGTCTaGTTACATCCTATTTCATCT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGASCVV*LHPISS
Trigger: AGATGAAATAGGATGTAATCAGACGACACAGGAAGC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGGGAGATTTCGCTCCTaGAGAAAATTCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGGRFRS*RKFNSF
Trigger: AAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTCTCAAAACTATCAAGTaGACTGACAGAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: LLSKMWLELEVFIISALSLKTIK*TDRSTS
Trigger: AGATGTACTTCTGTCAGTTCACTTGATAGTTTTGAG...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCAGAACCTGGACCCTCTaGACTGCAGCATTTACTGCA +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSRTWTL*TAAFTA
Trigger: TGCAGTAAATGCTGCAGTTCAGAGGGTCCAGGTTCT...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGAGGTTTTTCCTCCTTaGGCCTCATCTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEEVFPP*ASSVLL
Trigger: CAGAAGTACAGATGAGGCTCAAGGAGGAAAAACCTC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATTCTTACCATCTAACTaGTTTTTGTTGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLFLPSN*FLLGAE
Trigger: TTCTGCACCCAACAAAAATCAGTTAGATGGTAAGAA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCGTGTAATGATGAGGTaGATCAAAAGCAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQRVMMR*IKSKTS
Trigger: GGAAGTTTTGCTTTTGATTCACCTCATCATTACACG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAAGTATGGGTTTAGGCTaGCCTCGATTTATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPESMGLG*PRFIGC
Trigger: GCAGCCAATAAATCGAGGTCAGCCTAAACCCATACT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCTCAGAGAGGAATTATaGGAAAAGCAAACCGGAGTA +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGLREEL*EKQTGV
Trigger: TACTCCGGTTTGCTTTTCTCATAATTCCTCTCTGAG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTTCCCAGAGAGATTCCTaGTTTCAGGGAAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPSQRDS*FQGKDG
Trigger: TCCATCCTTTCCCTGAAATCAGGAATCTCTCTGGGA...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCGAATCTCTAGATCCTaGTCTAGAAGGTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGRISRS*SRRCFT
Trigger: AGTAAAGCACCTTCTAGATCAGGATCTAGAGATTCG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGATGTCCTTGGAAGTTaGGATAATTTGTTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQDVLGS*DNLLGG
Trigger: TCCTCCTAACAAATTATCTCAACTTCCAAGGACATC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAACTCTGATTTGCCTTaGTTCATATTCCAATTGCCT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCNSDLP*FIFQLP
Trigger: AGGCAATTGGAATATGAAGCAAGGCAAATCAGAGTT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAAGTGCCAACCAAAAATaGAAGTGCACCATCTACAGC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHESANQK*KCTIYS
Trigger: GCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCAAGAGCTTCTTCTAAGTaGATTTCTCTCATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPRASSK*ISLICH
Trigger: GTGACAGATGAGAGAAATGCACTTAGAAGAAGCTCT...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAACTTCCAGAGTTCAACTaGTCATCTGAATATTTAAGA +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQLPEFN*SSEYLR
Trigger: TCTTAAATATTCAGATGAGCAGTTGAACTCTGGAAG...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTATGTTCGGTTTTACTaGTTTGTCCAGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCYVRFY*FVQMNS
Trigger: AGAGTTCATCTGGACAAAGCAGTAAAACCGAACATA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTGGACGTATTCTCACTaGTTGAAGACATATGTTCGG +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGWTYSH*LKTYVR
Trigger: CCGAACATATGTCTTCAAGCAGTGAGAATACGTCCA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAACCACTTCTACTCTGTaGAGAACTTGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPETTSTL*RTWMEL
Trigger: CAGCTCCATCCAAGTTCTGCACAGAGTAGAAGTGGT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTGATTTGGTTCTAGGGTaGTGTGACACTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPDLVLG*CDTAGT
Trigger: AGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATC...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGATAAACTAGAACCCTaGAGTCTGCTGGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFDKLEP*SLLDLV
Trigger: AACCAAATCCAGCAGACTGCAGGGTTCTAGTTTATC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGCTTTTCAGCAGTAGGTaGTTTATTTTTAGGTACTTC +
Preference number: 4 (lower is better)
Translates to: WWRSANLALKKFLDFLLLLFSSR*FIFRYF
Trigger: GAAGTACCTAAAAATAAAGCACCTACTGCTGAAAAG...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTGCATTTACTGCAGCTTaGTTAGGTCCACTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPAFTAA*LGPLSL
Trigger: GAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGC...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACTGATTTTTGTTGGGTaGAGAAGAAGACGCAGATGC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHELIFVG*RRRRRC
Trigger: GCATCTGCGTCTTCTTCTGCACCCAACAAAAATCAG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGAGCTTATACATTCCTaGAACAGGTCATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFELIHS*NRSSSE
Trigger: CTCTGAAGATGACCTGTTGCAGGAATGTATAAGCTC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGATCTTCACCTAATATaGCACCCATATTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFDLHLI*HPYFWD
Trigger: GTCCCAGAAATATGGGTGGCATATTAGGTGAAGATC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCGGTCTACTTAATGGTTaGTGGGCAGGTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSGLLNG*WAGLEG
Trigger: CCCTTCAAGACCTGCCCAGCAACCATTAAGTAGACC...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAATATCATGGCGCTTTaGTGGTCTTCCATCATTATA +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCNIMAL*WSSIII
Trigger: TATAATGATGGAAGACCAGCAAAGCGCCATGATATT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAGATGAATGTTTGCTGTaGTCACGTTTCCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEDECLL*SRFQVP
Trigger: AGGAACCTGGAAACGTGAGCACAGCAAACATTCATC...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTCAGGAATAGATAAGTaGCAACGCATGGAATGGTTA +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQSGIDK*QRMEWL
Trigger: TAACCATTCCATGCGTTGGCACTTATCTATTCCTGA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTATGTGGGCCTATTATaGTCAATGCTTAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGYVGLL*SMLSLC
Trigger: GCACAGACTAAGCATTGAGCATAATAGGCCCACATA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTATGTGGGCCTATTATaGTCAATGCTTAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFYVGLL*SMLSLC
Trigger: GCACAGACTAAGCATTGAGCATAATAGGCCCACATA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAATTCCAATTGCCTTCTaGTCATATCTGTTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLIPIAF*SYLFVR
Trigger: CCTTACAAACAGATATGACCAGAAGGCAATTGGAAT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACGATTTGCTGAATTCTaGCTATTCTTCGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHERFAEF*LFFAVL
Trigger: GAGCACAGCGAAGAATAGCCAGAATTCAGCAAATCG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCACACTGGCTGTTTCATaGTCCATTCGTGTAGTTGAA +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGTLAVS*SIRVVE
Trigger: TTCAACTACACGAATGGACCATGAAACAGCCAGTGT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAGATATACAGCTGTCTTaGGAGCTAGACATAGCTAGC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEDIQLS*ELDIAS
Trigger: GCTAGCTATGTCTAGCTCCCAAGACAGCTGTATATC...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCTTAGGATTTGCCTGTaGTCCTCATTTGTAGCTATC +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGLRICL*SSFVAI
Trigger: GATAGCTACAAATGAGGACCACAGGCAAATCCTAAG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTACTTAGGATTTGCCTGTaGTCCTCATTTGTAGCTATC +
Preference number: 4 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLLRICL*SSFVAI
Trigger: GATAGCTACAAATGAGGACCACAGGCAAATCCTAAG...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAGCACTATGTATTTTATaGGCTAGGTCGGCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEALCIL*ARSAGY
Trigger: ATACCCAGCCGACCTAGCCCATAAAATACATAGTGC...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTCTTCTATTATGTGTTTaGGTCTTGCCCATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LLSKMWLELEVFIISALSLLLCV*VLPIFH
Trigger: ATGAAAGATGGGCAAGACCCAAACACATAATAGAAG...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAACTCTGTGCAGAACTTaGATGGAGCTGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPETLCRT*MELILP
Trigger: AGGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTACAACAGCTTTGTGCCTaGCTGATTCTGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLQQLCA*LILKIN
Trigger: GTTTATCTTCAGAATCAGCCAGGCACAAAGCTGTTG...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATTTACTTCTGCTTGGTaGCATGGTTTGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEFTSAW*HGLSRA
Trigger: AGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATGTTTGAGGAGGTGGTaGAGGTGTTTTACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHECLRRW*RCFTSA
Trigger: AGCAGAAGTAAAACACCTCCACCACCTCCTCAAACA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTCAGAGCACTCAGGCTaGATGAACAAGAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFSEHSG*MNKKIH
Trigger: ATGGATTTTCTTGTTCATCCAGCCTGAGTGCTCTGA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACATCCAATTCAGGTATaGTTACAGATGAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLHPIQV*LQMRFF
Trigger: GAAAAACCTCATCTGTAACCATACCTGAATTGGATG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCATTATTAGCTGATTGTTaGTTGGAGGTTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RMESESDEACLDKHAAAALLADC*LEVSSV
Trigger: CACAGAACTAACCTCCAACCAACAATCAGCTAATAA...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGATGTCTTTGGATGACTaGGGAAAAGTGGATTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQMSLDD*GKVDCF
Trigger: GAAACAATCCACTTTTCCCCAGTCATCCAAAGACAT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGAATGTCTTTGGATGACTaGGGAAAAGTGGATTGTTTC +
Preference number: 4 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRMSLDD*GKVDCF
Trigger: GAAACAATCCACTTTTCCCCAGTCATCCAAAGACAT...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTTTTGGGATGTCTGCCTaGCAACAGGGCTTAATTCTG +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPFGMSA*QQGLIL
Trigger: CAGAATTAAGCCCTGTTGCCAGGCAGACATCCCAAA...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTACTACTGGCATTCTTaGATAAACCTGTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCYYWHS*INLFVW
Trigger: CCAAACAAACAGGTTTATCCAAGAATGCCAGTAGTA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATACTACTGGCATTCTTaGATAAACCTGTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLYYWHS*INLFVW
Trigger: CCAAACAAACAGGTTTATCCAAGAATGCCAGTAGTA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTTCTTGGAATACTACTaGCATTCTTGGATAAACCTG +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCFLEYY*HSWINL
Trigger: CAGGTTTATCCAAGAATGCCAGTAGTATTCCAAGAA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGGCAGACTCACTTCTTaGAATACTACTGGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGGRLTS*NTTGIL
Trigger: AAGAATGCCAGTAGTATTCCAAGAAGTGAGTCTGCC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCCTTTTGCGGATACTTaGTTTTCTTTACTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAPFADT*FSLLCL
Trigger: CAAACAAAGTAAAGAAAACCAAGTATCCGCAAAAGG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGTATACTATCAAATATaGCTTCCAGAACAAAAACCC +
Preference number: 4 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQVYYQI*LPEQKP
Trigger: GGGTTTTTGTTCTGGAAGCCATATTTGATAGTATAC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAAAGAGGAAATTATGTaGGCCTATTATGCTCAATGC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLKEEIM*AYYAQC
Trigger: GCATTGAGCATAATAGGCCCACATAATTTCCTCTTT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AATTATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAAACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: NYLLALVEDLSSPSSVPQTCFNN*SYEAAA
Trigger: GGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGT...TTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACTTCCATCGCAACTCTaGTTTGCCTTGCTTCATATT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHELPSQL*FALLHI
Trigger: AATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATCCTTTTCGATTTGCTaGATTCTGGCTATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHESFSIC*ILAILR
Trigger: GCGAAGAATAGCCAGAATTCAGCAAATCGAAAAGGA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCACAGAAGTTGCCATGTTaGTTTCTCCCACTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSQKLPC*FLPLLD
Trigger: GTCAAGGAGTGGGAGAAATCAACATGGCAACTTCTG...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACATATCATCCTTATCATaGGTACCAAGCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDISSLS*VPSIDN
Trigger: GTTGTCAATGCTTGGTACTCATGATAAGGATGATAT...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTTTTGTTTCCTAACATaGAGAGATGGCAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFFCFLT*RDGKLE
Trigger: CTCAAGCTTGCCATCTCTTCATGTTAGGAAACAAAA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCTTTTGTTTCCTAACATaGAGAGATGGCAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GISRICFLCRLITSYFIFFCFLT*RDGKLE
Trigger: CTCAAGCTTGCCATCTCTTCATGTTAGGAAACAAAA...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCTCTGCTTACTACGATaGGATGCCTTGGGACTTAAA +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPLCLLR*DALGLK
Trigger: TTTAAGTCCCAAGGCATCTCATCGTAGTAAGCAGAG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAACCATCTTTCATTCTGTaGAGGACTTTGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEPSFIL*RTLPSR
Trigger: TCTGGAAGGCAAAGTCCTTCACAGAATGAAAGATGG...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTGTACTTTGATTCCTTaGTTGTCTTTGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQCTLIP*LSLLTL
Trigger: CAAAGTGAGCAAAGACAATCAAGGAATCAAAGTACA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAGGGAGATTTCGCTCCTaGAGAAAATTCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIGRFRS*RKFNSF
Trigger: AAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCC...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCCATTGTCATTTTCCTaGACTGGAGGCATTATTCTT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGPLSFS*TGGIIL
Trigger: AAGAATAATGCCTCCAGTTCAGGAAAATGACAATGG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCCCATTGTCATTTTCCTaGACTGGAGGCATTATTCTT +
Preference number: 4 (lower is better)
Translates to: GISRICFLCRLITSYFIFPLSFS*TGGIIL
Trigger: AAGAATAATGCCTCCAGTTCAGGAAAATGACAATGG...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTTTTTTCAAATTCACCTaGCTGTGCCCCTCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPFFKFT*LCPSSN
Trigger: GTTAGAGGAGGGGCACAGTCAGGTGAATTTGAAAAA...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCAAAGAATCATTTCGTaGAAAACAGTAAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQQRIIS*KTVRSS
Trigger: GGAACTCCTTACTGTTTTTCACGAAATGATTCTTTG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGCAAAGAATCATTTCGTaGAAAACAGTAAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELQRIIS*KTVRSS
Trigger: GGAACTCCTTACTGTTTTTCACGAAATGATTCTTTG...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGCAGCAGCAGCAGCTTaGTGTAAACTACTTACTATG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEAAAAA*CKLLTM
Trigger: CATAGTAAGTAGTTTACATCAAGCTGCTGCTGCTGC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCTCCCAGAGAGATTCCTaGTTTCAGGGAAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSSQRDS*FQGKDG
Trigger: TCCATCCTTTCCCTGAAATCAGGAATCTCTCTGGGA...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR TCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTAGATGTCCTTGGAAGTTaGGATAATTTGTTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLDVLGS*DNLLGG
Trigger: TCCTCCTAACAAATTATCTCAACTTCCAAGGACATC...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCACCATTTGTAGCACCTaGGGAAACGGTCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSTICST*GNGLRS
Trigger: ACTTCTCAGACCGTTTCCTCAGGTGCTACAAATGGT...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR TCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGACTTTCATTAGTCTCTaGTACAGGGACAGGATTATT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQTFISL*YRDRII
Trigger: AATAATCCTGTCCCTGTATCAGAGACTAATGAAAGT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTGTTGCAACAAGAAGATaGAGGGGCAAGACAGTTTAC +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPVATRR*RGKTVY
Trigger: GTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAAC...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGGCTATTCTTCGCTGTaGTCGTTTTTCCATATCCTG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEGYSSL*SFFHIL
Trigger: CAGGATATGGAAAAACGAGCACAGCGAAGAATAGCC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTACACTCGCAATAACCTaGTGTAAGTCTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFTLAIT*CKSSLS
Trigger: TGAAAGTGAAGACTTACAGCAGGTTATTGCGAGTGT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTTTACTATTTACATCTaGTCGCCAAGACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCFTIYI*SPRQIP
Trigger: AGGAATTTGTCTTGGCGAGCAGATGTAAATAGTAAA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTAGTGCCAACCAAAAATaGAAGTGCACCATCTACAGC +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPSANQK*KCTIYS
Trigger: GCTGTAGATGGTGCACTTGCATTTTTGGTTGGCACT...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCGCAGTGGTGGAGATCTaGAAACCTCGCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSAVVEI*KPRFEE
Trigger: TTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGC...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTCTTCCAGAGTTCAACTaGTCATCTGAATATTTAAGA +
Preference number: 4 (lower is better)
Translates to: LLSKMWLELEVFIISALSLPEFN*SSEYLR
Trigger: TCTTAAATATTCAGATGAGCAGTTGAACTCTGGAAG...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGAGGTGTTTTACTTCTaGTTGGTGGCATGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEEVFYF*LVAWFV
Trigger: GACAAACCATGCCACCAAGCAGAAGTAAAACACCTC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCTTTTCAGCAGTAGGTaGTTTATTTTTAGGTACTTC +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCLFSSR*FIFRYF
Trigger: GAAGTACCTAAAAATAAAGCACCTACTGCTGAAAAG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATTTGATTCTTTAGGCTaGTCTGATTCTGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLFDSLG*SDSVSF
Trigger: GAATGAAACAGAATCAGAGCAGCCTAAAGAATCAAA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAATATCACCTTCCTCTaGTTTATTGTCATCCAATTC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLNITFL*FIVIQF
Trigger: GAATTGGATGACAATAAAGCAGAGGAAGGTGATATT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATTCCACTGGATTCTGTaGTGTCAGTTTTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEFHWIL*CQFWNL
Trigger: GAGATTCCAAAACTGACAGCACAGAATCCAGTGGAA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGCCTATTATGCTCAATaGTTAGTCTGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEAYYAQ*LVCARL
Trigger: CAGCCTAGCACAGACTAAGCATTGAGCATAATAGGC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGAATTCCAATTGCCTTCTaGTCATATCTGTTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRIPIAF*SYLFVR
Trigger: CCTTACAAACAGATATGACCAGAAGGCAATTGGAAT...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACGTTTTTCCATATCCTaGCAGGTACCTAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHERFSIS*QVPSCS
Trigger: AGAACAACTAGGTACCTGCCAGGATATGGAAAAACG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCATCCAGACTGTCGCATaGATATACAGCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSIQTVA*IYSCLG
Trigger: CCCAAGACAGCTGTATATCCATGCGACAGTCTGGAT...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAAACAGGAGCTGGCATTaGATTTTTGTCCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPENRSWH*IFVLVH
Trigger: ATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTACGATGAGATGCCTTaGGACTTAAATTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCYDEMP*DLNCLY
Trigger: ATATAGACAATTTAAGTCCCAAGGCATCTCATCGTA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATACGATGAGATGCCTTaGGACTTAAATTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSYDEMP*DLNCLY
Trigger: ATATAGACAATTTAAGTCCCAAGGCATCTCATCGTA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCTTCTATTATGTGTTTaGGTCTTGCCCATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLLLCV*VLPIFH
Trigger: ATGAAAGATGGGCAAGACCCAAACACATAATAGAAG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TTCTGCTATTTGCAGGGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATGTCCAAAATGTGGTTaGAACTTGAGGTGTTTATCA +
Preference number: 4 (lower is better)
Translates to: FCYLQGISRICFLCRLITCPKCG*NLRCLS
Trigger: TGATAAACACCTCAAGTTCCAACCACATTTTGGACA...TGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAATAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGTGTCCAAAATGTGGTTaGAACTTGAGGTGTTTATCA +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELCPKCG*NLRCLS
Trigger: TGATAAACACCTCAAGTTCCAACCACATTTTGGACA...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGAAAATCCATCTGGAGTACTTTCCGTGGCAAAATGTAATAAAGTATCAGCATACTCTGTGCAGAACTTaGATGGAGCTGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KKIHLEYFPWQNVIKYQHTLCRT*MELILP
Trigger: AGGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGT...ATGCTGATACTTTATTACATTTTGCCACGGAAAGTACTCCAGATGGATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCTGGAGTACTTTCCGTaGCAAAATGTAATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCLEYFP*QNVIKY
Trigger: ATACTTTATTACATTTTGCCACGGAAAGTACTCCAG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATCAGAGCACTCAGGCTaGATGAACAAGAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHESEHSG*MNKKIH
Trigger: ATGGATTTTCTTGTTCATCCAGCCTGAGTGCTCTGA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATACTAACTGATTTTTGTTaGGTGCAGAAGAAGACGCAG +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMILTDFC*VQKKTQ
Trigger: CTGCGTCTTCTTCTGCACCCAACAAAAATCAGTTAG...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTTGTCTGGTATGTCTTTaGATGACTGGGGAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPCLVCL*MTGEKW
Trigger: CCACTTTTCCCCAGTCATCCAAAGACATACCAGACA...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGAAAATCCATCTGGAGTACTTTCCGTGGCAAAATGTAATAAAGTATCAGCATTTTGGGATGTCTGCCTaGCAACAGGGCTTAATTCTG +
Preference number: 4 (lower is better)
Translates to: KKIHLEYFPWQNVIKYQHFGMSA*QQGLIL
Trigger: CAGAATTAAGCCCTGTTGCCAGGCAGACATCCCAAA...ATGCTGATACTTTATTACATTTTGCCACGGAAAGTACTCCAGATGGATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGCTTTTCCTAGGGCTTaGGTTGTAATTAAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGAFPRA*VVIKRS
Trigger: ACTCCTTTTAATTACAACCCAAGCCCTAGGAAAAGC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATGTGTTGTTATTCACTaGAGTTGGGATCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHECVVIH*SWDLRW
Trigger: CCATCTCAGATCCCAACTCCAGTGAATAACAACACA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGTATACTATCAAATATaGCTTCCAGAACAAAAACCC +
Preference number: 4 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLVYYQI*LPEQKP
Trigger: GGGTTTTTGTTCTGGAAGCCATATTTGATAGTATAC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
3UTR CAA 72 bp TGTTTACAAAGTGGTGCAGTAGACACAGTACAGGCATaGGAGTCAAATATCTTAGCTCAAGTCATAGCACTT +
Preference number: 4 (lower is better)
Translates to: CLQSGAVDTVQA*ESNILAQVIAL
Trigger: AAGTGCTATGACTTGAGCTAAGATATTTGACTCCAATGCCTGTACTGTGTCTACTGCACCACTTTGTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257430.9
3UTR CAA 72 bp TTCGCGACATATCATCCTTATCATGAGTACCAAGCATaGACAACAATGAATACACCATTTCCACCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: FATYHPYHEYQA*TTMNTPFPPWF
Trigger: GAACCAAGGTGGAAATGGTGTATTCATTGTTGTCAATGCTTGGTACTCATGATAAGGATGATATGTCGCGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTATCAGCAAGAAGCAATaGCCTCTCTTTCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPISKKQ*PLFLKF
Trigger: GAACTTGAGAAAGAGAGGTCATTGCTTCTTGCTGAT...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATCCTTTTCGATTTGCTaGATTCTGGCTATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPESFSIC*ILAILR
Trigger: GCGAAGAATAGCCAGAATTCAGCAAATCGAAAAGGA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTATTCCACATGCATTACTaGCTATTGTCAAACTATGAG +
Preference number: 4 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLFHMHY*LLSNYE
Trigger: CTCATAGTTTGACAATAGTCAGTAATGCATGTGGAA...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATATTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIFRISC*EIPQSS
Trigger: GGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAA...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEFRISC*EIPQSS
Trigger: GGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAAAGAGATGGCAAGCTTaGGCCAGGAGACATAATATT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEKRWQA*ARRHNI
Trigger: AATATTATGTCTCCTGGCTCAAGCTTGCCATCTCTT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCCTCTGCTTACTACGATaGGATGCCTTGGGACTTAAA +
Preference number: 4 (lower is better)
Translates to: RLAYILINSMIRTHSICFLCLLR*DALGLK
Trigger: TTTAAGTCCCAAGGCATCTCATCGTAGTAAGCAGAG...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAGAAATTGTAAGTGTTTaGATGTGTATGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEEIVSV*MCMGSR
Trigger: TCTGCTGCCCATACACATTCAAACACTTACAATTTC...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCCCATCTTTCATTCTGTaGAGGACTTTGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RLAYILINSMIRTHSICFPSFIL*RTLPSR
Trigger: TCTGGAAGGCAAAGTCCTTCACAGAATGAAAGATGG...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTTCTTACCATCTAACTaGTTTTTGTTGGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGFLPSN*FLLGAE
Trigger: TTCTGCACCCAACAAAAATCAGTTAGATGGTAAGAA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTGAGAGAACTGTTTCTTaGGAAACAAACTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPERTVS*ETNWGI
Trigger: GATACCCCAGTTTGTTTCTCAAGAAACAGTTCTCTC...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCGAATTTGCACCTTCCTaGATAGCTTTCCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLEFAPS*IAFQSK
Trigger: TTTTGATTGGAAAGCTATTCAGGAAGGTGCAAATTC...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAGATGTCCTTGGAAGTTaGGATAATTTGTTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEDVLGS*DNLLGG
Trigger: TCCTCCTAACAAATTATCTCAACTTCCAAGGACATC...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCGAAGGACTTTCAGAATaGGACCGTGCAATATCATGG +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSEGLSE*DRAISW
Trigger: CCATGATATTGCACGGTCTCATTCTGAAAGTCCTTC...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCGGCTATTCTTCGCTGTaGTCGTTTTTCCATATCCTG +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSGYSSL*SFFHIL
Trigger: CAGGATATGGAAAAACGAGCACAGCGAAGAATAGCC...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATACAGCTTTATTCTCAGTaGAATGTGCTGACAAATTCC +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIQLYSQ*NVLTNS
Trigger: GGAATTTGTCAGCACATTGCACTGAGAATAAAGCTG...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CATTCCTGCAACAGGTCATCTTCAGAGTCAATACTAAGAGAACTGAGAGAACTGCTTCCAGAGTTCAACTaGTCATCTGAATATTTAAGA +
Preference number: 4 (lower is better)
Translates to: HSCNRSSSESILRELRELLPEFN*SSEYLR
Trigger: TCTTAAATATTCAGATGAGCAGTTGAACTCTGGAAG...CAGTTCTCTCAGTTCTCTTAGTATTGACTCTGAAGATGACCTGTTGCAGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACAGGAGAAACACATTCCTaGTGTCCAAAATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTGETHS*CPKCGW
Trigger: CCAACCACATTTTGGACAGCAGGAATGTGTTTCTCC...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACTATGTTCGGTTTTACTaGTTTGTCCAGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNYVRFY*FVQMNS
Trigger: AGAGTTCATCTGGACAAAGCAGTAAAACCGAACATA...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTTTGATTCTTTAGGCTaGTCTGATTCTGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQFDSLG*SDSVSF
Trigger: GAATGAAACAGAATCAGAGCAGCCTAAAGAATCAAA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGAATATCACCTTCCTCTaGTTTATTGTCATCCAATTC +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQNITFL*FIVIQF
Trigger: GAATTGGATGACAATAAAGCAGAGGAAGGTGATATT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCGTTTTTCCATATCCTaGCAGGTACCTAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPRFSIS*QVPSCS
Trigger: AGAACAACTAGGTACCTGCCAGGATATGGAAAAACG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCACACCATTTCCACCTTaGTTCCCAGATGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: RLAYILINSMIRTHSICFTPFPP*FPDDLS
Trigger: TGACAAGTCATCTGGGAACCAAGGTGGAAATGGTGT...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAACTTTCAGATTTTAGTTaGGCCACAAGTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPELSDFS*ATSALM
Trigger: CATGAGAGCACTTGTGGCCCAACTAAAATCTGAAAG...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCTTCTATTATGTGTTTaGGTCTTGCCCATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGLLLCV*VLPIFH
Trigger: ATGAAAGATGGGCAAGACCCAAACACATAATAGAAG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCCTTCTATTATGTGTTTaGGTCTTGCCCATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: GISRICFLCRLITSYFIFLLLCV*VLPIFH
Trigger: ATGAAAGATGGGCAAGACCCAAACACATAATAGAAG...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCAAGAAACTTTGCAAGTaGCAGCCTTTTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSKKLCK*QPFEAD
Trigger: GTCAGCCTCAAAAGGCTGCCACTTGCAAAGTTTCTT...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCAACAGCTTTGTGCCTaGCTGATTCTGAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPQQLCA*LILKIN
Trigger: GTTTATCTTCAGAATCAGCCAGGCACAAAGCTGTTG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCATCTGCTAAACATGAGTaGGGTCTCCTGAACATAGTG +
Preference number: 4 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSSAKHE*GLLNIV
Trigger: CACTATGTTCAGGAGACCCCACTCATGTTTAGCAGA...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTAAACTAACATGCTTTTaGGGTTGCAACCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFKLTCF*GCNLFC
Trigger: ACAAAACAGGTTGCAACCCCAAAAGCATGTTAGTTT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAACTAACTGATTTTTGTTaGGTGCAGAAGAAGACGCAG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPELTDFC*VQKKTQ
Trigger: CTGCGTCTTCTTCTGCACCCAACAAAAATCAGTTAG...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAACTGACCTCGATTTATTaGCTGCTTTGCAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPELTSIY*LLCNSL
Trigger: CAAGCTATTGCAAAGCAGCCAATAAATCGAGGTCAG...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAATGTCTTTGGATGACTaGGGAAAAGTGGATTGTTTC +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEMSLDD*GKVDCF
Trigger: GAAACAATCCACTTTTCCCCAGTCATCCAAAGACAT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAATTTCAGGGAAAGGATaGAATCTGAATCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEISGKG*NLNQTK
Trigger: CTTCGTCTGATTCAGATTCCATCCTTTCCCTGAAAT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCCTTTTGCGGATACTTaGTTTTCTTTACTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQPFADT*FSLLCL
Trigger: CAAACAAAGTAAAGAAAACCAAGTATCCGCAAAAGG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCTGTGCTGTCAGTTTTaGAATCTCGCTTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPLCCQF*NLASLC
Trigger: ACACAAAGAAGCGAGATTCCAAAACTGACAGCACAG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTAAAGAGGAAATTATGTaGGCCTATTATGCTCAATGC +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFKEEIM*AYYAQC
Trigger: GCATTGAGCATAATAGGCCCACATAATTTCCTCTTT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTATCTCCATTGTTTATaGAAGCCTGGGAAAACAACA +
Preference number: 4 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFYLHCL*KPGKTT
Trigger: TGTTGTTTTCCCAGGCTTCCATAAACAATGGAGATA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
3UTR CAA 72 bp GATGATTGGAATTATCTTCTAGCTCTTGTCGAAGATTaGAGTTCTCCATCTTCAGTGCCTCAACTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: DDWNYLLALVED*SSPSSVPQLAL
Trigger: TAAAGCAAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAATCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATTTTGTTTCCTAACATaGAGAGATGGCAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEFCFLT*RDGKLE
Trigger: CTCAAGCTTGCCATCTCTTCATGTTAGGAAACAAAA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTGTTTCTGATAAGTGCTaGGCATCTAATTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPVSDKC*ASNSAS
Trigger: AGAAGCAGAATTAGATGCTCAGCACTTATCAGAAAC...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGAAATTGTAAGTGTTTaGATGTGTATGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEEIVSV*MCMGSR
Trigger: TCTGCTGCCCATACACATTCAAACACTTACAATTTC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACAGGGAGATTTCGCTCCTaGAGAAAATTCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTGRFRS*RKFNSF
Trigger: AAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCC...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATTCTTTAGGCTGCTCTaGTTCTGTTTCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEFFRLL*FCFIPI
Trigger: AATGGGAATGAAACAGAATCAGAGCAGCCTAAAGAA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACAGAGAGAACTGTTTCTTaGGAAACAAACTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTERTVS*ETNWGI
Trigger: GATACCCCAGTTTGTTTCTCAAGAAACAGTTCTCTC...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAGAATTTGCACCTTCCTaGATAGCTTTCCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEEFAPS*IAFQSK
Trigger: TTTTGATTGGAAAGCTATTCAGGAAGGTGCAAATTC...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCCGAATCTCTAGATCCTaGTCTAGAAGGTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSRISRS*SRRCFT
Trigger: AGTAAAGCACCTTCTAGATCAGGATCTAGAGATTCG...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR TCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATTACCATTATTCATCTaGTTTAGTCCTTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHELPLFI*FSPLEA
Trigger: TGCCTCCAAAGGACTAAATCAGATGAATAATGGTAA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACACACTCAATACGCTTTTaGGGGTTGATTCCTAGTTCA +
Preference number: 4 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTHSIRF*GLIPSS
Trigger: TGAACTAGGAATCAACCCTCAAAAGCGTATTGAGTG...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502371.2
CDS-3UTR TCA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCACTCATCTTTTCTATCTaGCCATTACCAGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSLIFSI*PLPEVA
Trigger: GGCAACTTCTGGTAATGGTCAGATAGAAAAGATGAG...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAAGCACATTCCATCAATaGTTTCACACTTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPESTFHQ*FHTSNF
Trigger: GAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGCT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAAACCAAAAATGCAAGTaGACCATCTACAGCACATAT +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMINQKCK*TIYSTY
Trigger: ATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTT...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATTCTCTCTTAGGATTTaGCTGTGGTCCTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEFSLRI*LWSSFV
Trigger: TACAAATGAGGACCACAGGCAAATCCTAAGAGAGAA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAGGTGTTTATCATCAGTaGTCTCAGTATAAACAGGAT +
Preference number: 4 (lower is better)
Translates to: PVSSDYILFHLQLMTKMIGVYHQ*SQYKQD
Trigger: ATCCTGTTTATACTGAGAGCACTGATGATAAACACC...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACATGGACGTATTCTCACTaGTTGAAGACATATGTTCGG +
Preference number: 4 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTWTYSH*LKTYVR
Trigger: CCGAACATATGTCTTCAAGCAGTGAGAATACGTCCA...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACAGGTATTAGCAGAATCTaGTTCCTGTGTCGTCTGATT +
Preference number: 4 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTGISRI*FLCRLI
Trigger: AATCAGACGACACAGGAAGCAGATTCTGCTAATACC...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAAATATCATGGCGCTTTaGTGGTCTTCCATCATTATA +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHENIMAL*WSSIII
Trigger: TATAATGATGGAAGACCAGCAAAGCGCCATGATATT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAATTCCAATTGCCTTCTaGTCATATCTGTTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEIPIAF*SYLFVR
Trigger: CCTTACAAACAGATATGACCAGAAGGCAATTGGAAT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCCTTTCAGATTTTAGTTaGGCCACAAGTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: RLAYILINSMIRTHSICFLSDFS*ATSALM
Trigger: CATGAGAGCACTTGTGGCCCAACTAAAATCTGAAAG...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTACTGGAGTACTTTCCGTaGCAAAATGTAATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLLEYFP*QNVIKY
Trigger: ATACTTTATTACATTTTGCCACGGAAAGTACTCCAG...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCATCTTTCTGTATAAATaGCTCATCGAGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSIFLYK*LIEAQS
Trigger: GCTCTGAGCCTCGATGAGCCATTTATACAGAAAGAT...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCCTAACTGATTTTTGTTaGGTGCAGAAGAAGACGCAG +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSLTDFC*VQKKTQ
Trigger: CTGCGTCTTCTTCTGCACCCAACAAAAATCAGTTAG...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATTCTTGGAATACTACTaGCATTCTTGGATAAACCTG +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEFLEYY*HSWINL
Trigger: CAGGTTTATCCAAGAATGCCAGTAGTATTCCAAGAA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCTGTGTTGTTATTCACTaGAGTTGGGATCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSCVVIH*SWDLRW
Trigger: CCATCTCAGATCCCAACTCCAGTGAATAACAACACA...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCCTGTGCTGTCAGTTTTaGAATCTCGCTTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSLCCQF*NLASLC
Trigger: ACACAAAGAAGCGAGATTCCAAAACTGACAGCACAG...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257430.9
3UTR CAA 72 bp TATGGTGAAAGGACAGTCATGTTGCCAGTATTAAAATaGTCTGACCTATTATCATCATGTCGATTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: YGERTVMLPVLK*SDLLSSCRLVS
Trigger: TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACATGACTGTCCTTTCACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
3UTR CAA 72 bp TGTGCTGACAAATTCCATAAGGCACTCAATACGCTTTaGAGGGTTGATTCCTTTTTAACTTCTAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: CADKFHKALNTL*RVDSFLTSKAH
Trigger: ATGTGCTTTAGAAGTTAAAAAGGAATCAACCCTCAAAAGCGTATTGAGTGCCTTATGGAATTTGTCAGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTATATCATCCTTATCATaGGTACCAAGCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPISSLS*VPSIDN
Trigger: GTTGTCAATGCTTGGTACTCATGATAAGGATGATAT...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATTCCACATGCATTACTaGCTATTGTCAAACTATGAG +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEFHMHY*LLSNYE
Trigger: CTCATAGTTTGACAATAGTCAGTAATGCATGTGGAA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCGTTTCTGATAAGTGCTaGGCATCTAATTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSVSDKC*ASNSAS
Trigger: AGAAGCAGAATTAGATGCTCAGCACTTATCAGAAAC...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAACTCAAAACTATCAAGTaGACTGACAGAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPELKTIK*TDRSTS
Trigger: AGATGTACTTCTGTCAGTTCACTTGATAGTTTTGAG...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCTCAAAACTATCAAGTaGACTGACAGAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPLKTIK*TDRSTS
Trigger: AGATGTACTTCTGTCAGTTCACTTGATAGTTTTGAG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCACGTGTAATGATGAGGTaGATCAAAAGCAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSRVMMR*IKSKTS
Trigger: GGAAGTTTTGCTTTTGATTCACCTCATCATTACACG...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGAATTTGCACCTTCCTaGATAGCTTTCCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEEFAPS*IAFQSK
Trigger: TTTTGATTGGAAAGCTATTCAGGAAGGTGCAAATTC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAACTTTCATTAGTCTCTaGTACAGGGACAGGATTATT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPETFISL*YRDRII
Trigger: AATAATCCTGTCCCTGTATCAGAGACTAATGAAAGT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGCTTCATATTCCAATTaGCTTCTGGTCATATCTGTT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEASYSN*LLVISV
Trigger: AACAGATATGACCAGAAGGCAATTGGAATATGAAGC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAAACTCTGATTTGCCTTaGTTCATATTCCAATTGCCT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPENSDLP*FIFQLP
Trigger: AGGCAATTGGAATATGAAGCAAGGCAAATCAGAGTT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCAGCACATTCCATCAATaGTTTCACACTTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSSTFHQ*FHTSNF
Trigger: GAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGCT...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTAACCAAAAATGCAAGTaGACCATCTACAGCACATAT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPNQKCK*TIYSTY
Trigger: ATATGTGCTGTAGATGGTGCACTTGCATTTTTGGTT...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATATGTTCGGTTTTACTaGTTTGTCCAGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEYVRFY*FVQMNS
Trigger: AGAGTTCATCTGGACAAAGCAGTAAAACCGAACATA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCAATTCAACAGCTTTGTaGCTGGCTGATTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: RLAYILINSMIRTHSICFNSTAL*LADSED
Trigger: ATCTTCAGAATCAGCCAGGCACAAAGCTGTTGAATT...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACTAGGCTGCTTGCATTaGTATTACATGAATTTACTT +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHELGCLH*YYMNLL
Trigger: AAGTAAATTCATGTAATAGCAATGCAAGCAGCCTAG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAGTAAACTACTTACTATaGAATTTGCACCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: YYAQCLVCARLLALLLHEVNYLL*NLHLPE
Trigger: TTCAGGAAGGTGCAAATTCCATAGTAAGTAGTTTAC...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGCTATTTCGAACTCCTaGAATATGAATCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEAISNS*NMNHCP
Trigger: AGGACAATGATTCATATTCCAGGAGTTCGAAATAGC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTTTGATGAAAGTTGACTaGCGTACTAATACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPLMKVD*RTNTGL
Trigger: AAGACCTGTATTAGTACGCCAGTCAACTTTCATCAA...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR TCA 90 bp GTAACGTTCACTATAATTGGTAGGCTTATCATCTTCATAGTCATCTTCTTGACATGTACTTTGATTCCTTaGTTGTCTTTGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: VTFTIIGRLIIFIVIFLTCTLIP*LSLLTL
Trigger: CAAAGTGAGCAAAGACAATCAAGGAATCAAAGTACA...TGTCAAGAAGATGACTATGAAGATGATAAGCCTACCAATTATAGTGAACGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCCCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 4 (lower is better)
Translates to: RLAYILINSMIRTHSICFPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCTTCCAGAGTTCAACTaGTCATCTGAATATTTAAGA +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPLPEFN*SSEYLR
Trigger: TCTTAAATATTCAGATGAGCAGTTGAACTCTGGAAG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR GCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCGGTGTTTATCATCAGTaGTCTCAGTATAAACAGGAT +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSGVYHQ*SQYKQD
Trigger: ATCCTGTTTATACTGAGAGCACTGATGATAAACACC...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR GCA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCATATGTTCGGTTTTACTaGTTTGTCCAGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSYVRFY*FVQMNS
Trigger: AGAGTTCATCTGGACAAAGCAGTAAAACCGAACATA...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR GCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAACTTTTCAGCAGTAGGTaGTTTATTTTTAGGTACTTC +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPELFSSR*FIFRYF
Trigger: GAAGTACCTAAAAATAAAGCACCTACTGCTGAAAAG...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTTACGATGAGATGCCTTaGGACTTAAATTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPYDEMP*DLNCLY
Trigger: ATATAGACAATTTAAGTCCCAAGGCATCTCATCGTA...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGTAAACTACTTACTATaGAATTTGCACCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: HNSCLINKRAAISPQIPEVNYLL*NLHLPE
Trigger: TTCAGGAAGGTGCAAATTCCATAGTAAGTAGTTTAC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CCA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCAGGGGCTGTTTCATTTaGCCTGAAATTTCTGAATTA +
Preference number: 4 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSRGCFI*PEISEL
Trigger: TAATTCAGAAATTTCAGGCCAAATGAAACAGCCCCT...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257430.9
3UTR CAA 72 bp TGCTCACTTTGTTTTATTTCATCTTCTATTATGTGTTaGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: CSLCFISSSIMC*GLAHLSFCEGL
Trigger: AAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAATAGAAGATGAAATAAAACAAAGTGAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS GCA 90 bp GCCCAGTGGCCAGAAGTACGAGCGCCGCCCGGGCTCTTCGTCTCCTaGCGGACGCAGCTCCTGCTGCCGCCGGTGCTCCAGGACCCGAGA +
Preference number: 5 (lower is better)
Translates to: AQWPEVRAPPGLFVS*RTQLLLPPVLQDPR
Trigger: TCTCGGGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGCAGGAGACGAAGAGCCCGGGCGGCGCTCGTACTTCTGGCCACTGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS TCA 90 bp CCGGACGCAGCTCCTGCTGCCGCCGGTGCTCCAGGACCCGAGAACTaGGGGTGGTACAGAAGCGGGCAAAGGGGCGACCGGACCCGAGCC +
Preference number: 5 (lower is better)
Translates to: PDAAPAAAGAPGPEN*GWYRSGQRGDRTRA
Trigger: GGCTCGGGTCCGGTCGCCCCTTTGCCCGCTTCTGTACCACCCTCAGTTCTCGGGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS GCA 90 bp GAGCGCCGCCCGGGCTCTTCGTCTCCTGCCGGACGCAGCTCCTGCTaGCGCCGGTGCTCCAGGACCCGAGAACTGAGGGTGGTACAGAAG +
Preference number: 5 (lower is better)
Translates to: ERRPGSSSPAGRSSC*RRCSRTRELRVVQK
Trigger: CTTCTGTACCACCCTCAGTTCTCGGGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGCAGGAGACGAAGAGCCCGGGCGGCGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS GCA 90 bp TACGAGCGCCGCCCGGGCTCTTCGTCTCCTGCCGGACGCAGCTCCTaGTGCCGCCGGTGCTCCAGGACCCGAGAACTGAGGGTGGTACAG +
Preference number: 5 (lower is better)
Translates to: YERRPGSSSPAGRSS*CRRCSRTRELRVVQ
Trigger: CTGTACCACCCTCAGTTCTCGGGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGCAGGAGACGAAGAGCCCGGGCGGCGCTCGTA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS GCA 90 bp CCGGGCTCTTCGTCTCCTGCCGGACGCAGCTCCTGCTGCCGCCGGTaGTCCAGGACCCGAGAACTGAGGGTGGTACAGAAGCGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PGSSSPAGRSSCCRR*SRTRELRVVQKRAK
Trigger: CTTTGCCCGCTTCTGTACCACCCTCAGTTCTCGGGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGCAGGAGACGAAGAGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS TCA 90 bp CCCAGGGAGGCGTACATAGGGGGCGCCGAGGCCCGAGAAGGCAACTaGGTGCTTCACCTTCCTCACCAACAGCCAACAACAGTACCTGGG +
Preference number: 5 (lower is better)
Translates to: PREAYIGGAEAREGN*VLHLPHQQPTTVPG
Trigger: CCCAGGTACTGTTGTTGGCTGTTGGTGAGGAAGGTGAAGCACTCAGTTGCCTTCTCGGGCCTCGGCGCCCCCTATGTACGCCTCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS CCA 90 bp CAACTGAGTGCTTCACCTTCCTCACCAACAGCCAACAACAGTACCTaGGAACAGCATCGAGCCAACCTCGGTCCGCAGCTCCCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QLSASPSSPTANNST*EQHRANLGPQLPGL
Trigger: CAGGCCCGGGAGCTGCGGACCGAGGTTGGCTCGATGCTGTTCCCAGGTACTGTTGTTGGCTGTTGGTGAGGAAGGTGAAGCACTCAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS-3UTR CAA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACCATCCTTGGCTACCCTaGGACCCCATTTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADHPWLP*DPISES
Trigger: GGACTCGGAAATGGGGTCCAAGGGTAGCCAAGGATG...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACAAGCTGCAGCCATCCTaGGCTACCCTTGGACCCCAT +
Preference number: 5 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADKLQPS*ATLGPH
Trigger: ATGGGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTT...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGACTCTCCAGAACGGCTaGATACAGATCCTTCCCGGC +
Preference number: 5 (lower is better)
Translates to: QVDFWVSEHHFWREISLLTLQNG*IQILPG
Trigger: GCCGGGAAGGATCTGTATCAAGCCGTTCTGGAGAGT...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTGGTTCCCAGATGACTaGTCAGCCTTCGAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: QVDFWVSEHHFWREISLLWFPDD*SAFEVQ
Trigger: CTGCACCTCGAAGGCTGACAAGTCATCTGGGAACCA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp CTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTGCTCCACACCCCGCCCCCTaGCTACTTGCCCTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: LLALVEDLSSPSSVPQLAPHPAP*LLALRH
Trigger: ATGGCGGAGGGCAAGTAGCAAGGGGGCGGGGTGTGG...AGCAAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCGCAAGTGGCAGCCTTTaGAGGCTGACCACTTCTACT +
Preference number: 5 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICASGSL*RLTTST
Trigger: AGTAGAAGTGGTCAGCCTCAAAAGGCTGCCACTTGC...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACCCTTCACTAGGGCTTTaGGAGGCTGGAGTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADPSLGL*EAGVLR
Trigger: CCTTAAGACTCCAGCCTCCAAAAGCCCTAGTGAAGG...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCATCCTTGGCTACCCTaGGACCCCATTTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPHPWLP*DPISES
Trigger: GGACTCGGAAATGGGGTCCAAGGGTAGCCAAGGATG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CAA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTGATTTCTCCCACTCCTaGACCTTCATTCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: ATSALMQPFIEHSVALLADFSHS*TFILPL
Trigger: GAGCGGCAGAATGAAGGTCAAGGAGTGGGAGAAATC...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCTACTCTGTGCAGAACTaGGATGGAGCTGATTCTGCC +
Preference number: 5 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICYSVQN*DGADSA
Trigger: GGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGTA...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp CTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTGCTCATCCTTGGCTACCCTaGGACCTGCCAGACGCTCGC +
Preference number: 5 (lower is better)
Translates to: LLALVEDLSSPSSVPQLAHPWLP*DLPDAR
Trigger: GCGAGCGTCTGGCAGGTCCAAGGGTAGCCAAGGATG...AGCAAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS-3UTR CAA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACAACGGAGGGACATTTTaGACCGCAGTTTTACTCCAG +
Preference number: 5 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADNGGTF*TAVLLQ
Trigger: CTGGAGTAAAACTGCGGTCAAAAATGTCCCTCCGTT...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCCATAGCGTAGCCTTGTaGGCTACATCTCCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICHSVAL*ATSPKV
Trigger: GACTTTTGGAGATGTAGCCAACAAGGCTACGCTATG...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCGCAAGTGGCAGCCTTTaGAGGCTGACCACTTCTACT +
Preference number: 5 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVASGSL*RLTTST
Trigger: AGTAGAAGTGGTCAGCCTCAAAAGGCTGCCACTTGC...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAGCATTTACTGCAGCTaGCTTAGGTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QVDFWVSEHHFWREISLLSIYCS*LRSTLS
Trigger: AGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGCT...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACACAGGCAGCTGACTaGGTTTCCTTGCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPTQAAD*VSLPQV
Trigger: CACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTGT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCCTGTCTGGTATGTCTTaGGATGACTGGGGAAAAGTG +
Preference number: 5 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICLSGMS*DDWGKV
Trigger: CACTTTTCCCCAGTCATCCAAAGACATACCAGACAG...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAAGCTGCAGCCATCCTaGGCTACCCTTGGACCCCAT +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCKLQPS*ATLGPH
Trigger: ATGGGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAATGGTTCCCAGATGACTaGTCAGCCTTCGAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQWFPDD*SAFEVQ
Trigger: CTGCACCTCGAAGGCTGACAAGTCATCTGGGAACCA...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGCTGGCATTGGATTTTaGTCCTGGTCCATGCCTGGT +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPAGIGF*SWSMPG
Trigger: ACCAGGCATGGACCAGGACAAAAATCCAATGCCAGC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGACTTCTTCCATGACTTaGGCAATCTGGGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGTSSMT*AIWAAV
Trigger: CACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGCTTGGTGGCATGGTTaGTCCAGGGCTATCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTAWWHG*SRAIWK
Trigger: CTTCCAGATAGCCCTGGACAAACCATGCCACCAAGC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTCTGGGCTGGCTTTTTaGCTTTACGTGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: QVDFWVSEHHFWREISLLSGLAF*LYVMTL
Trigger: CAAAGTCATCACGTAAAGCAAAAAAGCCAGCCCAGA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS TCA 90 bp ATAGTGGGACTGAGATTAGGTGGGAGTTTTCGCCATCCACCAGCCTaGACAGACGAATGTGTGGATAGAGACATATCAGGAAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: IVGLRLGGSFRHPPA*TDECVDRDISGREG
Trigger: TCCTTCCCTTCCTGATATGTCTCTATCCACACATTCGTCTGTTCAGGCTGGTGGATGGCGAAAACTCCCACCTAATCTCAGTCCCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 90 bp TTGGAATCTCGCTTCTTTGTGTTGTTATTCACTGGAGTTGGGATCTaGGATGGCCGAGCTGAAGTGCTATCTGCGCTGCTTTTCCTAGGG +
Preference number: 5 (lower is better)
Translates to: LESRFFVLLFTGVGI*DGRAEVLSALLFLG
Trigger: CCCTAGGAAAAGCAGCGCAGATAGCACTTCAGCTCGGCCATCTCAGATCCCAACTCCAGTGAATAACAACACAAAGAAGCGAGATTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAACTCTCCAGAACGGCTaGATACAGATCCTTCCCGGC +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLTLQNG*IQILPG
Trigger: GCCGGGAAGGATCTGTATCAAGCCGTTCTGGAGAGT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGATTTCTCCCACTCCTaGACCTTCATTCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTDFSHS*TFILPL
Trigger: GAGCGGCAGAATGAAGGTCAAGGAGTGGGAGAAATC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAGATTTCTCCCACTCCTaGACCTTCATTCTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQDFSHS*TFILPL
Trigger: GAGCGGCAGAATGAAGGTCAAGGAGTGGGAGAAATC...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATGGTTCCCAGATGACTaGTCAGCCTTCGAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLWFPDD*SAFEVQ
Trigger: CTGCACCTCGAAGGCTGACAAGTCATCTGGGAACCA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCCCCCTAGTTCATTCATaGCATGTCTATGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICPLVHS*HVYALH
Trigger: ATGAAGAGCATAGACATGCAATGAATGAACTAGGGG...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCAGGTGGAGGTAATTTaGAAGCAGTCTGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTQVEVI*KQSGLA
Trigger: AGCCAGCCCAGACTGCTTCAAAATTACCTCCACCTG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCCAGGTGGAGGTAATTTaGAAGCAGTCTGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCQVEVI*KQSGLA
Trigger: AGCCAGCCCAGACTGCTTCAAAATTACCTCCACCTG...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGGATGGAATCTGAATCAGACGAAGCTTGTCTAGATAAACATGCAGCAGCAGCAACACAGGCAGCTGACTaGGTTTCCTTGCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: RMESESDEACLDKHAAAATQAAD*VSLPQV
Trigger: CACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTGT...TGCTGCTGCTGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCATGCTTGAGGTTTACTaGGTTCTCCCTGTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVMLEVY*VLPVSQ
Trigger: CTGACTCACAGGGAGAACCAAGTAAACCTCAAGCAT...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAACCTTCACTAGGGCTTTaGGAGGCTGGAGTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQPSLGL*EAGVLR
Trigger: CCTTAAGACTCCAGCCTCCAAAAGCCCTAGTGAAGG...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGTTTGGTAAGGTTCTGTaGGCTCATCTGTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGFGKVL*AHLSTW
Trigger: CCAGGTAGACAGATGAGCCAACAGAACCTTACCAAA...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTGTTATTCACTGGAGTaGGGATCTGAGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPCYSLE*GSEMAE
Trigger: CTCGGCCATCTCAGATCCCAACTCCAGTGAATAACA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATCTTCTAGCTCTTGTCGAAGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTAAGCTGCAGCCATCCTaGGCTACCCTTGGACCTGCC +
Preference number: 5 (lower is better)
Translates to: YLLALVEDLSSPSSVPQLKLQPS*ATLGPA
Trigger: GGCAGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTT...AAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS TCA 90 bp CTTTGTGTTGTTATTCACTGGAGTTGGGATCTGAGATGGCCGAGCTaGAGTGCTATCTGCGCTGCTTTTCCTAGGGCTTGGGTTGTAATT +
Preference number: 5 (lower is better)
Translates to: LCVVIHWSWDLRWPS*SAICAAFPRAWVVI
Trigger: AATTACAACCCAAGCCCTAGGAAAAGCAGCGCAGATAGCACTTCAGCTCGGCCATCTCAGATCCCAACTCCAGTGAATAACAACACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 90 bp GGAGAGCACAAAGGTACACTTATACCAGTGATTCTTAATTGGTGGTaGCGTTGTCCTTCCTCCCTCCCACAGACATCTGACAGTATCTGG +
Preference number: 5 (lower is better)
Translates to: GEHKGTLIPVILNWW*RCPSSLPQTSDSIW
Trigger: CCAGATACTGTCAGATGTCTGTGGGAGGGAGGAAGGACAACGTCACCACCAATTAAGAATCACTGGTATAAGTGTACCTTTGTGCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505084.1
CDS CCA 90 bp TGCTGGTCTTCCATCATTATACTCTATAGTGGGACTGAGATTAGGTaGGAGTTTTCGCCATCCACCAGCCTGAACAGACGAATGTGTGGA +
Preference number: 5 (lower is better)
Translates to: CWSSIIILYSGTEIR*EFSPSTSLNRRMCG
Trigger: TCCACACATTCGTCTGTTCAGGCTGGTGGATGGCGAAAACTCCCACCTAATCTCAGTCCCACTATAGAGTATAATGATGGAAGACCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGTGCTTCATATTCCAATaGCCTTCTGGTCATATCTGT +
Preference number: 5 (lower is better)
Translates to: QVDFWVSEHHFWREISLLCFIFQ*PSGHIC
Trigger: ACAGATATGACCAGAAGGCAATTGGAATATGAAGCA...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGCTGGCATTGGATTTTaGTCCTGGTCCATGCCTGGT +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLAGIGF*SWSMPG
Trigger: ACCAGGCATGGACCAGGACAAAAATCCAATGCCAGC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCAACAGGAGCTGGCATaGGATTTTTGTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHQQELA*DFCPGP
Trigger: TGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCGCACTCAATACGCTTTaGAGGGTTGATTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICALNTL*RVDSFL
Trigger: TAAAAAGGAATCAACCCTCAAAAGCGTATTGAGTGC...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAACTTCTTCCATGACTTaGGCAATCTGGGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQTSSMT*AIWAAV
Trigger: CACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCAATCGAGGGTTTCATTaGACCTCTTTTACCATAACC +
Preference number: 5 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICNRGFH*TSFTIT
Trigger: GGTTATGGTAAAAGAGGTCAAATGAAACCCTCGATT...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTTTGTTTCTGAACCATaGGCTCCCCGTGACCTGTAT +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPFVSEP*APRDLY
Trigger: ATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGACGTATTCTCACTGCTaGAAGACATATGTTCGGTTT +
Preference number: 5 (lower is better)
Translates to: QVDFWVSEHHFWREISLLTYSHC*KTYVRF
Trigger: AAACCGAACATATGTCTTCAAGCAGTGAGAATACGT...CAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGTACTTCTCGCTTGGTTaGAGCTGTTTGAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: WWRSANLALKKFLDFLLLYFSLG*SCLRRW
Trigger: CCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTA...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCGCTGACTTGGTTTCCTaGCCACAGGTGGAGGTAATT +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAADLVS*PQVEVI
Trigger: AATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGC...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCAGAAGACGCAGATGCTaGCTGGACCTGGTCCATTAT +
Preference number: 5 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCRRRRC*LDLVHY
Trigger: ATAATGGACCAGGTCCAGCAAGCATCTGCGTCTTCT...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATTTAGCTGATTGTTGGTaGGAGGTTAGTTCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: GALLDPPIWDVCLATGLNLADCW*EVSSVW
Trigger: CCACACAGAACTAACCTCCAACCAACAATCAGCTAA...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTCCTGCCTCGAGAGATaGAAGGCATGTTTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPSCLER*KACLLE
Trigger: TTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGGA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCCTTCACTAGGGCTTTaGGAGGCTGGAGTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCPSLGL*EAGVLR
Trigger: CCTTAAGACTCCAGCCTCCAAAAGCCCTAGTGAAGG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACTTCTACCAGGGGAAATaGAGTTTCGGCCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHFYQGK*SFGQET
Trigger: AGTCTCCTGGCCGAAACTCAATTTCCCCTGGTAGAA...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACATGGCGCTTAGGACTTaGGGTTCCACTGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHMALRT*GSTGFC
Trigger: ACAGAATCCAGTGGAACCCAAAGTCCTAAGCGCCAT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGCAGGCTGGGTAAACTaGTTCATCGGGAACCATATT +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPAGWVN*FIGNHI
Trigger: AATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 90 bp AGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCCATCCTTGGCTACCCTTGGACCCCA +
Preference number: 5 (lower is better)
Translates to: RFEFSIFSASTCFNN*SYEAAAILGYPWTP
Trigger: TGGGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGTTGAGGCACTGAAGATGGAGAACTCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508624.5
CDS TCA 90 bp AGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCCATCCTTGGCTACCCTTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: RFEFSIFSASTCFNN*SYEAAAILGYPWTC
Trigger: GCAGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGTTGAGGCACTGAAGATGGAGAACTCAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505350.1
ENST00000508376.6
ENST00000512211.6
CDS TCA 90 bp AGATTTGAGTTCTCCATCTTCAGTGCCTCAACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCCATCCTTGGCTACCCTTGGACCTGG +
Preference number: 5 (lower is better)
Translates to: RFEFSIFSASTCFNN*SYEAAAILGYPWTW
Trigger: CCAGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGTTGAGGCACTGAAGATGGAGAACTCAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509732.5
CDS CCA 90 bp AGAGACATATCAGGAAGGGAAGGACTTAAAACTGGAGTTTGTGCCTaGGACCTAGTGGGAGAAGCTGGTCTAGATGATGGAGAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: RDISGREGLKTGVCA*DLVGEAGLDDGERD
Trigger: ATCTCTTTCTCCATCATCTAGACCAGCTTCTCCCACTAGGTCCCAGGCACAAACTCCAGTTTTAAGTCCTTCCCTTCCTGATATGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTCAACAGGAGCTGGCATaGGATTTTTGTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: LLSKMWLELEVFIISALSQQELA*DFCPGP
Trigger: TGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTG...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGATCACCATAGAGACTTaGCTTGTGTCTCTGCTTACT +
Preference number: 5 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGITIET*LVSLLT
Trigger: AGTAAGCAGAGACACAAGCAAAGTCTCTATGGTGAT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GCCACAAGTGCTCTCATGCAGCCTTTCATAGAGCATAGCGTAGCCTTGTTGGCTAAATGTGGTTGGAACTaGAGGTGTTTATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: ATSALMQPFIEHSVALLAKCGWN*RCLSSV
Trigger: CACTGATGATAAACACCTCAAGTTCCAACCACATTT...AGCCAACAAGGCTACGCTATGCTCTATGAAAGGCTGCATGAGAGCACTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCTGTCCTGTCCAAAATGTGGTaGGAACTTGAGGTGTTTATC +
Preference number: 5 (lower is better)
Translates to: FLNHWLPVTCMEKHIPAVLSKMW*ELEVFI
Trigger: GATAAACACCTCAAGTTCCAACCACATTTTGGACAG...GACAGCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAATTTGTTTCTGAACCATaGGCTCCCCGTGACCTGTAT +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQFVSEP*APRDLY
Trigger: ATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCTAGGGTGCTGTGACACTGCTGGAACTTCGCTCACAGGATCTTCAGCTGACGTCCAGATGAACTCTTaGAGAATGAAAATGACTGTT +
Preference number: 5 (lower is better)
Translates to: VLGCCDTAGTSLTGSSADVQMNS*RMKMTV
Trigger: AACAGTCATTTTCATTCTCAAAGAGTTCATCTGGAC...GTCAGCTGAAGATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGCAAGTGGCAGCCTTTaGAGGCTGACCACTTCTACT +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQASGSL*RLTTST
Trigger: AGTAGAAGTGGTCAGCCTCAAAAGGCTGCCACTTGC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTGCAGTCTGCTGGATTaGGTTCTAGGGTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQCSLLD*VLGCCD
Trigger: GTCACAGCACCCTAGAACCAAATCCAGCAGACTGCA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCGCTTGGTGGCATGGTTaGTCCAGGGCTATCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GISRICFLCRLITSYFIFAWWHG*SRAIWK
Trigger: CTTCCAGATAGCCCTGGACAAACCATGCCACCAAGC...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATACTTCTCGCTTGGTTaGAGCTGTTTGAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLYFSLG*SCLRRW
Trigger: CCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCAGCATTTACTGCAGCTaGCTTAGGTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTASIYCS*LRSTLS
Trigger: AGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGCT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGTGCTGACTTGGTTTCCTaGCCACAGGTGGAGGTAATT +
Preference number: 5 (lower is better)
Translates to: LLSKMWLELEVFIISALSADLVS*PQVEVI
Trigger: AATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGC...ACTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCATGCTTGAGGTTTACTaGGTTCTCCCTGTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAMLEVY*VLPVSQ
Trigger: CTGACTCACAGGGAGAACCAAGTAAACCTCAAGCAT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCTGGAATATGAATCATaGTCCTGCCTCGAGAGATTG +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPLEYES*SCLERL
Trigger: CAATCTCTCGAGGCAGGACAATGATTCATATTCCAG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCAGAAGTGGTGGCTGTTaGACCTTCACTAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCRSGGC*TFTRAF
Trigger: AAAAGCCCTAGTGAAGGTCAAACAGCCACCACTTCT...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATTCTACCAGGGGAAATaGAGTTTCGGCCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSFYQGK*SFGQET
Trigger: AGTCTCCTGGCCGAAACTCAATTTCCCCTGGTAGAA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAGGGATGATGAATGTTaGCTGTGCTCACGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQRDDEC*LCSRFQ
Trigger: CTGGAAACGTGAGCACAGCAAACATTCATCATCCCT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCAGGGATGATGAATGTTaGCTGTGCTCACGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTARDDEC*LCSRFQ
Trigger: CTGGAAACGTGAGCACAGCAAACATTCATCATCCCT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATATCTCAGTTCCTTTTaGGTCAGGGGCATCCACCTG +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLYLSSF*VRGIHL
Trigger: CAGGTGGATGCCCCTGACCAAAAAGGAACTGAGATA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAAAGCTGCAGCCATCCTaGGCTACCCTTGGACCTGCC +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPEKLQPS*ATLGPA
Trigger: GGCAGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508376.6
CDS-3UTR CAA 90 bp GCTGACACTTCTTCCATGACTTTGGCAATCTGGGCTGCAGTGGTGGAGATCTGCTTCCTAGTTCATTCATaGCATGTCTATGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: ADTSSMTLAIWAAVVEICFLVHS*HVYALH
Trigger: ATGAAGAGCATAGACATGCAATGAATGAACTAGGAA...GCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502371.2
CDS GCA 90 bp CTTCTCCAAGTGCTTACTCGAGGAAGGGATGATGAATGTTTGCTGTaGTCACGTTTCCAGGTTCCTGACCTATTGATTGGAAGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: LLQVLTRGRDDECLL*SRFQVPDLLIGSLE
Trigger: TTCTAGACTTCCAATCAATAGGTCAGGAACCTGGAAACGTGAGCACAGCAAACATTCATCATCCCTTCCTCGAGTAAGCACTTGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAACTCTCCAGAACGGCTaGATACAGATCCTTCCCGGC +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHETLQNG*IQILPG
Trigger: GCCGGGAAGGATCTGTATCAAGCCGTTCTGGAGAGT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCTCCAAAAGTCAAGTTaGTCAAAGCCATTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPLQKSS*SKPFQH
Trigger: ATGCTGGAATGGCTTTGACAAACTTGACTTTTGGAG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACATAGCGTAGCCTTGTaGGCTACATCTCCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLHSVAL*ATSPKV
Trigger: GACTTTTGGAGATGTAGCCAACAAGGCTACGCTATG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTGAGCATAGCGTAGCCTaGTTGGCTACATCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCEHSVA*LATSPK
Trigger: TTTTGGAGATGTAGCCAACAAGGCTACGCTATGCTC...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAGATTTCGCTCCTGAAGAAAGTTTGTAGACAGTaGTTCTCTCTTAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: VDFWVSEHHFWREISLLKKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAACTGTCTACAAACTTT...CTTCAGGAGCGAAATCTCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCTGTCCAAAATGTGGTaGGAACTTGAGGTGTTTATC +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPLSKMW*ELEVFI
Trigger: GATAAACACCTCAAGTTCCAACCACATTTTGGACAG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTACTCTGTGCAGAACTaGGATGGAGCTGATTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQYSVQN*DGADSA
Trigger: GGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGTA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCATACTCTGTGCAGAACTaGGATGGAGCTGATTCTGCC +
Preference number: 5 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPYSVQN*DGADSA
Trigger: GGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGTA...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACTGCAGTCTGCTGGATTaGGTTCTAGGGTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNCSLLD*VLGCCD
Trigger: GTCACAGCACCCTAGAACCAAATCCAGCAGACTGCA...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGAAAATTCAACAGCTTaGTGCCTGGCTGATTCTGAA +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPENSTA*CLADSE
Trigger: TTCAGAATCAGCCAGGCACAAAGCTGTTGAATTTTC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ATGTTCAACAGGAGCTGGCATTGGATTTTTGTCCTGGTCCATGCCTGGTTCATGGAAAATTCAACAGCTTaGTGCCTGGCTGATTCTGAA +
Preference number: 5 (lower is better)
Translates to: MFNRSWHWIFVLVHAWFMENSTA*CLADSE
Trigger: TTCAGAATCAGCCAGGCACAAAGCTGTTGAATTTTC...CATGAACCAGGCATGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAGCATTTACTGCAGCTaGCTTAGGTCCACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLSIYCS*LRSTLS
Trigger: AGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGCT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCAGCAGCTAACTCATTaGGAGGGGATTCGATTGTTA +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHQQLTH*EGIRLL
Trigger: TAACAATCGAATCCCCTCCAAATGAGTTAGCTGCTG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCAGCAGCTAACTCATTaGGAGGGGATTCGATTGTTA +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTQQLTH*EGIRLL
Trigger: TAACAATCGAATCCCCTCCAAATGAGTTAGCTGCTG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGAGAAGACGCAGATGCTaGCTGGACCTGGTCCATTAT +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQRRRRC*LDLVHY
Trigger: ATAATGGACCAGGTCCAGCAAGCATCTGCGTCTTCT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTTAGCTGATTGTTGGTaGGAGGTTAGTTCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTALADCW*EVSSVW
Trigger: CCACACAGAACTAACCTCCAACCAACAATCAGCTAA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTCCTGCCTGGGGAAAAGTGGATaGTTTCTGAAGTATGGGTTT +
Preference number: 5 (lower is better)
Translates to: FVSEPLAPRDLYGETHSCLGKSG*FLKYGF
Trigger: AAACCCATACTTCAGAAACAATCCACTTTTCCCCAG...GCAGGAATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACTGTCTGGTATGTCTTaGGATGACTGGGGAAAAGTG +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLLSGMS*DDWGKV
Trigger: CACTTTTCCCCAGTCATCCAAAGACATACCAGACAG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTGAACATAGTGTTCAGGTGGACTTTTGGGTGTCTGAGCACCACTTTTGGAGGGAAGGCTTTTTCTTTTTaGGCATTGCGGAGCTTATAC +
Preference number: 5 (lower is better)
Translates to: LNIVFRWTFGCLSTTFGGKAFSF*ALRSLY
Trigger: GTATAAGCTCCGCAATGCCAAAAAAGAAAAAGCCTT...CCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCCACCTGAACACTATGTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTAGATTGAAGGCATGTTaGCTTGAAGGGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTRLKAC*LEGAVS
Trigger: TGAAACAGCCCCTTCAAGCAAACATGCCTTCAATCT...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTCCTGCCTCGAGAGATaGAAGGCATGTTTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCSCLER*KACLLE
Trigger: TTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGGA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTAAACAGGACTTGTACTaGAGGAGCTATTTCGAACTC +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPKQDLY*RSYFEL
Trigger: GAGTTCGAAATAGCTCCTCAAGTACAAGTCCTGTTT...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAGAAGTGGTGGCTGTTaGACCTTCACTAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLRSGGC*TFTRAF
Trigger: AAAAGCCCTAGTGAAGGTCAAACAGCCACCACTTCT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTTTGGTAAGGTTCTGTaGGCTCATCTGTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCFGKVL*AHLSTW
Trigger: CCAGGTAGACAGATGAGCCAACAGAACCTTACCAAA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACAGGCAGACTCACTTCTaGGAATACTACTGGCATTCT +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHRQTHF*EYYWHS
Trigger: AGAATGCCAGTAGTATTCCAAGAAGTGAGTCTGCCT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCAATATCATGGCGCTTaGCTGGTCTTCCATCATTAT +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPQYHGA*LVFHHY
Trigger: ATAATGATGGAAGACCAGCAAAGCGCCATGATATTG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCTTCCAGATCTAGGATaGTTAATGGGACAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHLPDLG*LMGQSS
Trigger: TGAGGACTGTCCCATTAACAATCCTAGATCTGGAAG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCTAGGTGAACTGTGTTaGCTTGAGCTGCTAGAACTG +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCLGELC*LELLEL
Trigger: CAGTTCTAGCAGCTCAAGCAAACACAGTTCACCTAG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTGTTATTCACTGGAGTaGGGATCTGAGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQCYSLE*GSEMAE
Trigger: CTCGGCCATCTCAGATCCCAACTCCAGTGAATAACA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTTCTCGCTTCTTTGTGTaGTTATTCACTGGAGTTGGG +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTSRFFV*LFTGVG
Trigger: CCCAACTCCAGTGAATAACAACACAAAGAAGCGAGA...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGCAGGCTGGGTAAACTaGTTCATCGGGAACCATATT +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLAGWVN*FIGNHI
Trigger: AATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTATCATGTCAGACCCAGTaGCAACAAGAAGATGAAGGG +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLSCQTQ*QQEDEG
Trigger: CCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGA...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 90 bp CAGGTTCCTGACCTATTGATTGGAAGTCTAGAAGGACTTTCAGAATaGGACCGTGCAATATCATGGCGCTTTGCTGGTCTTCCATCATTA +
Preference number: 5 (lower is better)
Translates to: QVPDLLIGSLEGLSE*DRAISWRFAGLPSL
Trigger: TAATGATGGAAGACCAGCAAAGCGCCATGATATTGCACGGTCTCATTCTGAAAGTCCTTCTAGACTTCCAATCAATAGGTCAGGAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CCA 90 bp AGAAGGACTTTCAGAATGAGACCGTGCAATATCATGGCGCTTTGCTaGTCTTCCATCATTATACTCTATAGTGGGACTGAGATTAGGTGG +
Preference number: 5 (lower is better)
Translates to: RRTFRMRPCNIMALC*SSIIILYSGTEIRW
Trigger: CCACCTAATCTCAGTCCCACTATAGAGTATAATGATGGAAGACCAGCAAAGCGCCATGATATTGCACGGTCTCATTCTGAAAGTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGAACGGAGGGACATTTTaGACCGCAGTTTTACTCCAG +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQNGGTF*TAVLLQ
Trigger: CTGGAGTAAAACTGCGGTCAAAAATGTCCCTCCGTT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTCATCGCAACTCTGATTaGCCTTGCTTCATATTCCAA +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTHRNSD*PCFIFQ
Trigger: TTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATG...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ATGACTTGTCAGCCTTCGAGGTGCAGAGTGTGTGCTACTAGAACTCAAAACACTCATCGCAACTCTGATTaGCCTTGCTTCATATTCCAA +
Preference number: 5 (lower is better)
Translates to: MTCQPSRCRVCATRTQNTHRNSD*PCFIFQ
Trigger: TTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATG...AGTGTTTTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTCATGAGTACCAAGCATaGACAACAATGAATACACCA +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPHEYQA*TTMNTP
Trigger: TGGTGTATTCATTGTTGTCAATGCTTGGTACTCATG...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACCTCCAAAAGTCAAGTTaGTCAAAGCCATTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHLQKSS*SKPFQH
Trigger: ATGCTGGAATGGCTTTGACAAACTTGACTTTTGGAG...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGCACTCAATACGCTTTaGAGGGTTGATTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPALNTL*RVDSFL
Trigger: TAAAAAGGAATCAACCCTCAAAAGCGTATTGAGTGC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCATCACCATAGAGACTTaGCTTGTGTCTCTGCTTACT +
Preference number: 5 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCITIET*LVSLLT
Trigger: AGTAAGCAGAGACACAAGCAAAGTCTCTATGGTGAT...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GGTGCTTTACTTGACCCACCTATTTGGGATGTCTGCCTGGCAACAGGGCTTAATGAAAGGACAGTCATGTaGCCAGTATTAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: GALLDPPIWDVCLATGLNERTVM*PVLKLS
Trigger: AGACAATTTTAATACTGGCAACATGACTGTCCTTTC...ATTAAGCCCTGTTGCCAGGCAGACATCCCAAATAGGTGGGTCAAGTAAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTATCTAAGCTTCCTCTaGATGAAGAGGAGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCYLSFL*MKRSWV
Trigger: TACCCAGCTCCTCTTCATCAAGAGGAAGCTTAGATA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATTCCTGGATTTTCTGTaGCTGGATGGTAGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSFLDFL*LDGSCL
Trigger: TAGGCAACTACCATCCAGCAACAGAAAATCCAGGAA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTTTATGTGTTTGGGTCTaGCCCATCTTTCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTLCVWV*PIFHSV
Trigger: CACAGAATGAAAGATGGGCAAGACCCAAACACATAA...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTACTCTGTGCAGAACTaGGATGGAGCTGATTCTGCC +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGYSVQN*DGADSA
Trigger: GGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGTA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATGCAGTCTGCTGGATTaGGTTCTAGGGTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHECSLLD*VLGCCD
Trigger: GTCACAGCACCCTAGAACCAAATCCAGCAGACTGCA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACGAAAATTCAACAGCTTaGTGCCTGGCTGATTCTGAA +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHENSTA*CLADSE
Trigger: TTCAGAATCAGCCAGGCACAAAGCTGTTGAATTTTC...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTGCTTGGTGGCATGGTTaGTCCAGGGCTATCTGGAAG +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPAWWHG*SRAIWK
Trigger: CTTCCAGATAGCCCTGGACAAACCATGCCACCAAGC...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGTGTTTTACTTCTGCTaGGTGGCATGGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQVFYFC*VAWFVQ
Trigger: CTGGACAAACCATGCCACCAAGCAGAAGTAAAACAC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTACTTCTCGCTTGGTTaGAGCTGTTTGAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGYFSLG*SCLRRW
Trigger: CCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACAGGTGGAGGTAATTTaGAAGCAGTCTGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEQVEVI*KQSGLA
Trigger: AGCCAGCCCAGACTGCTTCAAAATTACCTCCACCTG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAACACAGGCAGCTGACTaGGTTTCCTTGCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPETQAAD*VSLPQV
Trigger: CACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTGT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACTTGGAGGGGATTCGATaGTTAGATCACTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHLEGIR*LDHLEM
Trigger: CATCTCTAAGTGATCTAACAATCGAATCCCCTCCAA...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCTTGGAGGGGATTCGATaGTTAGATCACTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTALEGIR*LDHLEM
Trigger: CATCTCTAAGTGATCTAACAATCGAATCCCCTCCAA...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATCCTTCCTCTGCTTTATaGTCATCCAATTCAGGTATG +
Preference number: 5 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHPSSAL*SSNSGM
Trigger: CATACCTGAATTGGATGACAATAAAGCAGAGGAAGG...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTTAGCTGATTGTTGGTaGGAGGTTAGTTCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCLADCW*EVSSVW
Trigger: CCACACAGAACTAACCTCCAACCAACAATCAGCTAA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAGATTGAAGGCATGTTaGCTTGAAGGGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCRLKAC*LEGAVS
Trigger: TGAAACAGCCCCTTCAAGCAAACATGCCTTCAATCT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCGATTTCACAGATGGCTaGGCTCCTCTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLDFTDG*APLGEV
Trigger: CACTTCTCCTAGAGGAGCCAAGCCATCTGTGAAATC...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAGGCAGACTCACTTCTaGGAATACTACTGGCATTCT +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLRQTHF*EYYWHS
Trigger: AGAATGCCAGTAGTATTCCAAGAAGTGAGTCTGCCT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCTTCCAGATCTAGGATaGTTAATGGGACAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCLPDLG*LMGQSS
Trigger: TGAGGACTGTCCCATTAACAATCCTAGATCTGGAAG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCATGGCGCTTAGGACTTaGGGTTCCACTGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGMALRT*GSTGFC
Trigger: ACAGAATCCAGTGGAACCCAAAGTCCTAAGCGCCAT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 90 bp TTTCCATATCCTGGCAGGTACCTAGTTGTTCTTCCATCGCAACTCTaGTTTGCCTTGCTTCATATTCCAATTGCCTTCTGGTCATATCTG +
Preference number: 5 (lower is better)
Translates to: FPYPGRYLVVLPSQL*FALLHIPIAFWSYL
Trigger: CAGATATGACCAGAAGGCAATTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAGAACAACTAGGTACCTGCCAGGATATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257430.9
ENST00000507379.5
ENST00000508376.6
ENST00000508624.5
ENST00000512211.6
CDS GCA 90 bp TCTAGAAGGACTTTCAGAATGAGACCGTGCAATATCATGGCGCTTTaGTGGTCTTCCATCATTATACTCTATAGTGGGACTGAGATTAGG +
Preference number: 5 (lower is better)
Translates to: SRRTFRMRPCNIMAL*WSSIIILYSGTEIR
Trigger: CCTAATCTCAGTCCCACTATAGAGTATAATGATGGAAGACCAGCAAAGCGCCATGATATTGCACGGTCTCATTCTGAAAGTCCTTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCATCGCAACTCTGATTaGCCTTGCTTCATATTCCAA +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCHRNSD*PCFIFQ
Trigger: TTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCACCTCTCTGCTTCTGTaGCTTGGGACTGTAAAAGCT +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGTSLLL*LGTVKA
Trigger: AGCTTTTACAGTCCCAAGCAACAGAAGCAGAGAGGT...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACACCTCTCTGCTTCTGTaGCTTGGGACTGTAAAAGCT +
Preference number: 5 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNTSLLL*LGTVKA
Trigger: AGCTTTTACAGTCCCAAGCAACAGAAGCAGAGAGGT...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCCATGAGTACCAAGCATaGACAACAATGAATACACCA +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAHEYQA*TTMNTP
Trigger: TGGTGTATTCATTGTTGTCAATGCTTGGTACTCATG...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLTESLS*PCKSWM
Trigger: CATCCAGCTTTTACATGGCAATGACAAAGACTCTGT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCCCCTAGTTCATTCATaGCATGTCTATGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCPLVHS*HVYALH
Trigger: ATGAAGAGCATAGACATGCAATGAATGAACTAGGGG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCGAGCATAGCGTAGCCTaGTTGGCTACATCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGEHSVA*LATSPK
Trigger: TTTTGGAGATGTAGCCAACAAGGCTACGCTATGCTC...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCATAATATTGGCATCCTaGTACTTCGCAGGCCTATTT +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAIILAS*YFAGLF
Trigger: AAATAGGCCTGCGAAGTACAAGGATGCCAATATTAT...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATATAATATTGGCATCCTaGTACTTCGCAGGCCTATTT +
Preference number: 5 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHIILAS*YFAGLF
Trigger: AAATAGGCCTGCGAAGTACAAGGATGCCAATATTAT...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCCAGGAGACATAATATaGGCATCCTTGTACTTCGCA +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQPGDII*ASLYFA
Trigger: TGCGAAGTACAAGGATGCCAATATTATGTCTCCTGG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCACCAGGAGACATAATATaGGCATCCTTGTACTTCGCA +
Preference number: 5 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPPGDII*ASLYFA
Trigger: TGCGAAGTACAAGGATGCCAATATTATGTCTCCTGG...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACTATCTAAGCTTCCTCTaGATGAAGAGGAGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDYLSFL*MKRSWV
Trigger: TACCCAGCTCCTCTTCATCAAGAGGAAGCTTAGATA...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTTCTGCAAACCTCGCTTaGAAGAAGTTCCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCSANLA*KKFLDF
Trigger: AAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGA...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCATCTGCAAACCTCGCTTaGAAGAAGTTCCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSSANLA*KKFLDF
Trigger: AAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGA...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATAACTTCTTCCATGACTTaGGCAATCTGGGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PVSSDYILFHLQLMTKMITSSMT*AIWAAV
Trigger: CACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGT...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAACTTCTTCCATGACTTaGGCAATCTGGGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHETSSMT*AIWAAV
Trigger: CACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TGGTGGAGATCTGCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGAATCGAGGGTTTCATTaGACCTCTTTTACCATAACC +
Preference number: 5 (lower is better)
Translates to: WWRSANLALKKFLDFLLLNRGFH*TSFTIT
Trigger: GGTTATGGTAAAAGAGGTCAAATGAAACCCTCGATT...CAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACTCTTCTATTATGTGTTaGGGTCTTGCCCATCTTTCA +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHSSIMC*GLAHLS
Trigger: TGAAAGATGGGCAAGACCCAAACACATAATAGAAGA...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTAAATGTGGTTGGAACTaGAGGTGTTTATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTKCGWN*RCLSSV
Trigger: CACTGATGATAAACACCTCAAGTTCCAACCACATTT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAAATGTGGTTGGAACTaGAGGTGTTTATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQKCGWN*RCLSSV
Trigger: CACTGATGATAAACACCTCAAGTTCCAACCACATTT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACTTTGTTTCTGAACCATaGGCTCCCCGTGACCTGTAT +
Preference number: 5 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNFVSEP*APRDLY
Trigger: ATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTGTCCAGATGAACTCTTaGAGAATGAAAATGACTGTT +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPVQMNS*RMKMTV
Trigger: AACAGTCATTTTCATTCTCAAAGAGTTCATCTGGAC...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGTGTTTTACTTCTGCTaGGTGGCATGGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFVFYFC*VAWFVQ
Trigger: CTGGACAAACCATGCCACCAAGCAGAAGTAAAACAC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATATGACCAGCAGCTAACTCATTaGGAGGGGATTCGATTGTTA +
Preference number: 5 (lower is better)
Translates to: VCLVRFCWLICLPGDVYDQQLTH*EGIRLL
Trigger: TAACAATCGAATCCCCTCCAAATGAGTTAGCTGCTG...GTCATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTCCTTCCTCTGCTTTATaGTCATCCAATTCAGGTATG +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCPSSAL*SSNSGM
Trigger: CATACCTGAATTGGATGACAATAAAGCAGAGGAAGG...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACCTTCCTCTGCTTTATaGTCATCCAATTCAGGTATG +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLPSSAL*SSNSGM
Trigger: CATACCTGAATTGGATGACAATAAAGCAGAGGAAGG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAAGAAGACGCAGATGCTaGCTGGACCTGGTCCATTAT +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHERRRRC*LDLVHY
Trigger: ATAATGGACCAGGTCCAGCAAGCATCTGCGTCTTCT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACTGGGGAAAAGTGGATaGTTTCTGAAGTATGGGTTT +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLLGKSG*FLKYGF
Trigger: AAACCCATACTTCAGAAACAATCCACTTTTCCCCAG...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAAGGCTTTTTCTTTTTaGGCATTGCGGAGCTTATAC +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQKAFSF*ALRSLY
Trigger: GTATAAGCTCCGCAATGCCAAAAAAGAAAAAGCCTT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCTCCTGCCTCGAGAGATaGAAGGCATGTTTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: GISRICFLCRLITSYFIFSCLER*KACLLE
Trigger: TTCAAGCAAACATGCCTTCAATCTCTCGAGGCAGGA...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCTGGAATATGAATCATaGTCCTGCCTCGAGAGATTG +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQLEYES*SCLERL
Trigger: CAATCTCTCGAGGCAGGACAATGATTCATATTCCAG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGACTGGAATATGAATCATaGTCCTGCCTCGAGAGATTG +
Preference number: 5 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRLEYES*SCLERL
Trigger: CAATCTCTCGAGGCAGGACAATGATTCATATTCCAG...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAAAACAGGACTTGTACTaGAGGAGCTATTTCGAACTC +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLKQDLY*RSYFEL
Trigger: GAGTTCGAAATAGCTCCTCAAGTACAAGTCCTGTTT...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAGATTTCACAGATGGCTaGGCTCCTCTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEDFTDG*APLGEV
Trigger: CACTTCTCCTAGAGGAGCCAAGCCATCTGTGAAATC...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGATAAACCTGTTTGTTaGGTAAGGTTCTGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSDKPVC*VRFCWL
Trigger: GAGCCAACAGAACCTTACCAAACAAACAGGTTTATC...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGCAGGTTCCTGACCTATaGATTGGAAGTCTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQQVPDL*IGSLEG
Trigger: TCCTTCTAGACTTCCAATCAATAGGTCAGGAACCTG...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTTTTCATCCTCACTTTTaGCTTTTTCACTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: DFPPLYKGTLNMYPRTVPFHPHF*LFHWIL
Trigger: CAGAATCCAGTGAAAAAGCAAAAAGTGAGGATGAAA...AGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATATCTCAGTTCCTTTTaGGTCAGGGGCATCCACCTG +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEYLSSF*VRGIHL
Trigger: CAGGTGGATGCCCCTGACCAAAAAGGAACTGAGATA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCTAGGTGAACTGTGTTaGCTTGAGCTGCTAGAACTG +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFLGELC*LELLEL
Trigger: CAGTTCTAGCAGCTCAAGCAAACACAGTTCACCTAG...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTCTCGCTTCTTTGTGTaGTTATTCACTGGAGTTGGG +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQSRFFV*LFTGVG
Trigger: CCCAACTCCAGTGAATAACAACACAAAGAAGCGAGA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS GCA 90 bp ATATCCTGGCAGGTACCTAGTTGTTCTTCCATCGCAACTCTGATTTaGCTTGCTTCATATTCCAATTGCCTTCTGGTCATATCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: ISWQVPSCSSIATLI*LASYSNCLLVISVC
Trigger: ACAAACAGATATGACCAGAAGGCAATTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAGAACAACTAGGTACCTGCCAGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257430.9
ENST00000507379.5
ENST00000508376.6
ENST00000508624.5
ENST00000512211.6
CDS GCA 90 bp ATGAAGCAGAAAGAATTGAAGATGAACTTCCAGTTCTTCTCCAAGTaGTTACTCGAGGAAGGGATGATGAATGTTTGCTGTGCTCACGTT +
Preference number: 5 (lower is better)
Translates to: MKQKELKMNFQFFSK*LLEEGMMNVCCAHV
Trigger: AACGTGAGCACAGCAAACATTCATCATCCCTTCCTCGAGTAAGCACTTGGAGAAGAACTGGAAGTTCATCTTCAATTCTTTCTGCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAAACGGAGGGACATTTTaGACCGCAGTTTTACTCCAG +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHENGGTF*TAVLLQ
Trigger: CTGGAGTAAAACTGCGGTCAAAAATGTCCCTCCGTT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ACTCGATTTGTTTCTGAACCATTGGCTCCCCGTGACCTGTATGGAGAAACACATTATGTCCTTTTCGATTaGCTGAATTCTGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: TRFVSEPLAPRDLYGETHYVLFD*LNSGYS
Trigger: AGAATAGCCAGAATTCAGCAAATCGAAAAGGACATA...ATGTGTTTCTCCATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAATCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAACCTCTCTGCTTCTGTaGCTTGGGACTGTAAAAGCT +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHETSLLL*LGTVKA
Trigger: AGCTTTTACAGTCCCAAGCAACAGAAGCAGAGAGGT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGTACCTACCACAAAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: LHCIRGHLTCTPELYLPQNNTES*SLPCKS
Trigger: GCTTTTACATGGCAATGACAAAGACTCTGTATTGTT...TTGTGGTAGGTACAGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAAACCTCGCTTTGAAGAAGTTCCTGGATTTTCTGTTGCTGGATGGTAGTTGCAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: ANLALKKFLDFLLLDGSCNNTES*SLPCKS
Trigger: GCTTTTACATGGCAATGACAAAGACTCTGTATTGTT...GCAACTACCATCCAGCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCGCTGGCATTGGATTTTaGTCCTGGTCCATGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RLAYILINSMIRTHSICFAGIGF*SWSMPG
Trigger: ACCAGGCATGGACCAGGACAAAAATCCAATGCCAGC...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCAACAGGAGCTGGCATaGGATTTTTGTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPQQELA*DFCPGP
Trigger: TGGACCAGGACAAAAATCCAATGCCAGCTCCTGTTG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTAAAGTTTGTAGACAGTaGTTCTCTCTTAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAACTGTCTACAAACTTT...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCCCAGGAGACATAATATaGGCATCCTTGTACTTCGCA +
Preference number: 5 (lower is better)
Translates to: GISRICFLCRLITSYFIFPGDII*ASLYFA
Trigger: TGCGAAGTACAAGGATGCCAATATTATGTCTCCTGG...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGATCACCATAGAGACTTaGCTTGTGTCTCTGCTTACT +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQITIET*LVSLLT
Trigger: AGTAAGCAGAGACACAAGCAAAGTCTCTATGGTGAT...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTATCTAAGCTTCCTCTaGATGAAGAGGAGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGYLSFL*MKRSWV
Trigger: TACCCAGCTCCTCTTCATCAAGAGGAAGCTTAGATA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCTATCTAAGCTTCCTCTaGATGAAGAGGAGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: GISRICFLCRLITSYFIFYLSFL*MKRSWV
Trigger: TACCCAGCTCCTCTTCATCAAGAGGAAGCTTAGATA...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTTCCTGGATTTTCTGTaGCTGGATGGTAGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGFLDFL*LDGSCL
Trigger: TAGGCAACTACCATCCAGCAACAGAAAATCCAGGAA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACTTCCTGGATTTTCTGTaGCTGGATGGTAGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNFLDFL*LDGSCL
Trigger: TAGGCAACTACCATCCAGCAACAGAAAATCCAGGAA...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCATCTGCAAACCTCGCTTaGAAGAAGTTCCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPSANLA*KKFLDF
Trigger: AAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGA...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp CTTTTGGAGGGAGATTTCGCTCCTGAAGAAAATTCAACAGCTTTGTGCCTGGCTGTCCAGATGAACTCTTaGAGAATGAAAATGACTGTT +
Preference number: 5 (lower is better)
Translates to: LLEGDFAPEENSTALCLAVQMNS*RMKMTV
Trigger: AACAGTCATTTTCATTCTCAAAGAGTTCATCTGGAC...AGCCAGGCACAAAGCTGTTGAATTTTCTTCAGGAGCGAAATCTCCCTCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCATGCAGTCTGCTGGATTaGGTTCTAGGGTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSCSLLD*VLGCCD
Trigger: GTCACAGCACCCTAGAACCAAATCCAGCAGACTGCA...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTCTGGGCTGGCTTTTTaGCTTTACGTGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGSGLAF*LYVMTL
Trigger: CAAAGTCATCACGTAAAGCAAAAAAGCCAGCCCAGA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGCTGACTTGGTTTCCTaGCCACAGGTGGAGGTAATT +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPEADLVS*PQVEVI
Trigger: AATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGATTGGAGGGGATTCGATaGTTAGATCACTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRLEGIR*LDHLEM
Trigger: CATCTCTAAGTGATCTAACAATCGAATCCCCTCCAA...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTAGATTGAAGGCATGTTaGCTTGAAGGGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFRLKAC*LEGAVS
Trigger: TGAAACAGCCCCTTCAAGCAAACATGCCTTCAATCT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAAGAAGTGGTGGCTGTTaGACCTTCACTAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHERSGGC*TFTRAF
Trigger: AAAAGCCCTAGTGAAGGTCAAACAGCCACCACTTCT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAGATTTCACAGATGGCTaGGCTCCTCTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPEDFTDG*APLGEV
Trigger: CACTTCTCCTAGAGGAGCCAAGCCATCTGTGAAATC...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATTCTACCAGGGGAAATaGAGTTTCGGCCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPEFYQGK*SFGQET
Trigger: AGTCTCCTGGCCGAAACTCAATTTCCCCTGGTAGAA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATTTGGTAAGGTTCTGTaGGCTCATCTGTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEFGKVL*AHLSTW
Trigger: CCAGGTAGACAGATGAGCCAACAGAACCTTACCAAA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCAGGTTCCTGACCTATaGATTGGAAGTCTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFQVPDL*IGSLEG
Trigger: TCCTTCTAGACTTCCAATCAATAGGTCAGGAACCTG...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTCACAGCCGCCATTACCCACATTTaGTTTTGCCTGATTATCTTT +
Preference number: 5 (lower is better)
Translates to: AGWVNLFIGNHITVNFTAAITHI*FCLIIF
Trigger: AAAGATAATCAGGCAAAACAAAATGTGGGTAATGGC...GGCTGTGAAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGGAAGACTTCCCTCCACTGTATAAGGGGACACTTAACATGTACCCCAGAACTGCCATTACCCACATTTaGTTTTGCCTGATTATCTTT +
Preference number: 5 (lower is better)
Translates to: KEDFPPLYKGTLNMYPRTAITHI*FCLIIF
Trigger: AAAGATAATCAGGCAAAACAAAATGTGGGTAATGGC...AGTTCTGGGGTACATGTTAAGTGTCCCCTTATACAGTGGAGGGAAGTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTTCTGTGCTGTCAGTTTaGGAATCTCGCTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFSVLSV*ESRFFV
Trigger: CACAAAGAAGCGAGATTCCAAAACTGACAGCACAGA...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGCTAGGCTGCTTGCATaGCTATTACATGAATTTACT +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLARLLA*LLHEFT
Trigger: AGTAAATTCATGTAATAGCAATGCAAGCAGCCTAGC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTACACAAAGTTCCATGTGATTaGAATTTTCTGAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: VHVRPSCNKKMKGQDSLHKVPCD*NFLSMA
Trigger: TGCCATGCTCAGAAAATTCAAATCACATGGAACTTT...GTGTAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATGTCTCCTCTCTCTTTaGGCCACCAATGCATGTGTC +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPECLLSL*ATNACV
Trigger: GACACATGCATTGGTGGCCAAAAGAGAGAGGAGACA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTGCTTCATATTCCAATaGCCTTCTGGTCATATCTGT +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQCFIFQ*PSGHIC
Trigger: ACAGATATGACCAGAAGGCAATTGGAATATGAAGCA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFTESLS*PCKSWM
Trigger: CATCCAGCTTTTACATGGCAATGACAAAGACTCTGT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNTESLS*PCKSWM
Trigger: CATCCAGCTTTTACATGGCAATGACAAAGACTCTGT...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp CCTCTGCTTTATTGTCATCCAATTCAGGTATGGTTACAGATGAGGTTTTTCCTCCTCCAAAAGTCAAGTTaGTCAAAGCCATTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: PLLYCHPIQVWLQMRFFLLQKSS*SKPFQH
Trigger: ATGCTGGAATGGCTTTGACAAACTTGACTTTTGGAG...GAGGAAAAACCTCATCTGTAACCATACCTGAATTGGATGACAATAAAGCAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCATAGCGTAGCCTTGTaGGCTACATCTCCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPHSVAL*ATSPKV
Trigger: GACTTTTGGAGATGTAGCCAACAAGGCTACGCTATG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGATGAAGGGGCAAGACAGTTTACACTGTAAAGCCTCGAAGAGACTGCAATGTAAAGTTTGTAGACAGTaGTTCTCTCTTAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: KMKGQDSLHCKASKRLQCKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAACTGTCTACAAACTTT...ACATTGCAGTCTCTTCGAGGCTTTACAGTGTAAACTGTCTTGCCCCTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAACCAGGAGACATAATATaGGCATCCTTGTACTTCGCA +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEPGDII*ASLYFA
Trigger: TGCGAAGTACAAGGATGCCAATATTATGTCTCCTGG...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGTGTTCATGTCAGACCCAGTTGCAACAAGAAGATGAAGGGGCAAGACAGTTTAGAAAGGACAGTCATGTaGCCAGTATTAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: SVHVRPSCNKKMKGQDSLERTVM*PVLKLS
Trigger: AGACAATTTTAATACTGGCAACATGACTGTCCTTTC...TAAACTGTCTTGCCCCTTCATCTTCTTGTTGCAACTGGGTCTGACATGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCCTGCTGTCCAAAATGTGGTTGGAACTTGAGGTGTTTATCATCAGTGCTCTCAGAAAGGACAGTCATGTaGCCAGTATTAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: SCCPKCGWNLRCLSSVLSERTVM*PVLKLS
Trigger: AGACAATTTTAATACTGGCAACATGACTGTCCTTTC...TGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATTCCTGGATTTTCTGTaGCTGGATGGTAGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEFLDFL*LDGSCL
Trigger: TAGGCAACTACCATCCAGCAACAGAAAATCCAGGAA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTCTGCAAACCTCGCTTaGAAGAAGTTCCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGSANLA*KKFLDF
Trigger: AAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATGATTTGCACTATGTATTTTATGGGCTAGGTCGGCTGGGTATTGACCATAACTTATGTGTTTGGGTCTaGCCCATCTTTCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: YDLHYVFYGLGRLGIDHNLCVWV*PIFHSV
Trigger: CACAGAATGAAAGATGGGCAAGACCCAAACACATAA...GTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATACATAGTGCAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTCTTCTATTATGTGTTaGGGTCTTGCCCATCTTTCA +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQSSIMC*GLAHLS
Trigger: TGAAAGATGGGCAAGACCCAAACACATAATAGAAGA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCCTGTCCAAAATGTGGTaGGAACTTGAGGTGTTTATC +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGLSKMW*ELEVFI
Trigger: GATAAACACCTCAAGTTCCAACCACATTTTGGACAG...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ATTATGTGTTTGGGTCTTGCCCATCTTTCATTCTGTGAAGGACTTTGCCTTCCAACGTATTCTCACTGCTaGAAGACATATGTTCGGTTT +
Preference number: 5 (lower is better)
Translates to: IMCLGLAHLSFCEGLCLPTYSHC*KTYVRF
Trigger: AAACCGAACATATGTCTTCAAGCAGTGAGAATACGT...TGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATCTGGGCTGGCTTTTTaGCTTTACGTGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHESGLAF*LYVMTL
Trigger: CAAAGTCATCACGTAAAGCAAAAAAGCCAGCCCAGA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCTGTCTGGTATGTCTTaGGATGACTGGGGAAAAGTG +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPLSGMS*DDWGKV
Trigger: CACTTTTCCCCAGTCATCCAAAGACATACCAGACAG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTATGCTTGAGGTTTACTaGGTTCTCCCTGTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPMLEVY*VLPVSQ
Trigger: CTGACTCACAGGGAGAACCAAGTAAACCTCAAGCAT...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCAAACAGGACTTGTACTaGAGGAGCTATTTCGAACTC +
Preference number: 5 (lower is better)
Translates to: GISRICFLCRLITSYFIFKQDLY*RSYFEL
Trigger: GAGTTCGAAATAGCTCCTCAAGTACAAGTCCTGTTT...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGATAAACCTGTTTGTTaGGTAAGGTTCTGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFDKPVC*VRFCWL
Trigger: GAGCCAACAGAACCTTACCAAACAAACAGGTTTATC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTGGAATCTCGCTTCTTaGTGTTGTTATTCACTGGAG +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGWNLAS*CCYSLE
Trigger: CTCCAGTGAATAACAACACAAAGAAGCGAGATTCCA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGGCTAGGCTGCTTGCATaGCTATTACATGAATTTACT +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQARLLA*LLHEFT
Trigger: AGTAAATTCATGTAATAGCAATGCAAGCAGCCTAGC...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CCA 90 bp TTTCTTCTTAAGGTTGGGCTTGGAGCTTCTTTGATGAAAGTTGACTaGCGTACTAATACAGGTCTTTCTGATCTATCAGATTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: FLLKVGLGASLMKVD*RTNTGLSDLSDSLP
Trigger: TGGAAGTGAATCTGATAGATCAGAAAGACCTGTATTAGTACGCCAGTCAACTTTCATCAAAGAAGCTCCAAGCCCAACCTTAAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTGCTCTTGTCGAAGATTaGAGTTCTCCATCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPALVED*SSPSSV
Trigger: CACTGAAGATGGAGAACTCAAATCTTCGACAAGAGC...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTACATGAGTACCAAGCATaGACAACAATGAATACACCA +
Preference number: 5 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLHEYQA*TTMNTP
Trigger: TGGTGTATTCATTGTTGTCAATGCTTGGTACTCATG...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGAAAATCCATCTGGAGTACTTTCCGTGGCAAAATGTAATAAAGTATCAGCATGAGCATAGCGTAGCCTaGTTGGCTACATCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: KKIHLEYFPWQNVIKYQHEHSVA*LATSPK
Trigger: TTTTGGAGATGTAGCCAACAAGGCTACGCTATGCTC...ATGCTGATACTTTATTACATTTTGCCACGGAAAGTACTCCAGATGGATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGCACTCAATACGCTTTaGAGGGTTGATTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFALNTL*RVDSFL
Trigger: TAAAAAGGAATCAACCCTCAAAAGCGTATTGAGTGC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACACTTCCAACTTCTCGCAACGTCTTTTTACTATTTACATCTGCTCGCCAAGAAAAGTTTGTAGACAGTaGTTCTCTCTTAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: HTSNFSQRLFTIYICSPRKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAACTGTCTACAAACTTT...TCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATTATGTGTTTGGGTCTaGCCCATCTTTCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHELCVWV*PIFHSV
Trigger: CACAGAATGAAAGATGGGCAAGACCCAAACACATAA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GCACATTCCATCAATGCTTTCACACTTCCAACTTCTCGCAACGTCTTTTTACTATCTTCTATTATGTGTTaGGGTCTTGCCCATCTTTCA +
Preference number: 5 (lower is better)
Translates to: AHSINAFTLPTSRNVFLLSSIMC*GLAHLS
Trigger: TGAAAGATGGGCAAGACCCAAACACATAATAGAAGA...TAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp GGTATTAGCAGAATCTGCTTCCTGTGTCGTCTGATTACATCCTATTTCATCTTCAAATGTGGTTGGAACTaGAGGTGTTTATCATCAGTG +
Preference number: 5 (lower is better)
Translates to: GISRICFLCRLITSYFIFKCGWN*RCLSSV
Trigger: CACTGATGATAAACACCTCAAGTTCCAACCACATTT...GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp CCTGTGTCGTCTGATTACATCCTATTTCATCTTCAGCTGATGACAAAGATGATACTGTCCAAAATGTGGTaGGAACTTGAGGTGTTTATC +
Preference number: 5 (lower is better)
Translates to: PVSSDYILFHLQLMTKMILSKMW*ELEVFI
Trigger: GATAAACACCTCAAGTTCCAACCACATTTTGGACAG...TATCATCTTTGTCATCAGCTGAAGATGAAATAGGATGTAATCAGACGACACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCTTTGTTTCTGAACCATaGGCTCCCCGTGACCTGTAT +
Preference number: 5 (lower is better)
Translates to: RLAYILINSMIRTHSICFFVSEP*APRDLY
Trigger: ATACAGGTCACGGGGAGCCAATGGTTCAGAAACAAA...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTACGTATTCTCACTGCTaGAAGACATATGTTCGGTTT +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFTYSHC*KTYVRF
Trigger: AAACCGAACATATGTCTTCAAGCAGTGAGAATACGT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGACTGGCTTACATTTTGATTAATTCCATGATTAGAACCCACTCGATTTGTTTCGTGTTTTACTTCTGCTaGGTGGCATGGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: RLAYILINSMIRTHSICFVFYFC*VAWFVQ
Trigger: CTGGACAAACCATGCCACCAAGCAGAAGTAAAACAC...GAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508624.5
CDS-3UTR CAA 90 bp TCACTGCTGAGATCTTGCCCTAACATACAGGGTGATAAAAAGTGTTCATGTCAGTTTCATCCTCACTTTTaGCTTTTTCACTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: SLLRSCPNIQGDKKCSCQFHPHF*LFHWIL
Trigger: CAGAATCCAGTGAAAAAGCAAAAAGTGAGGATGAAA...CTGACATGAACACTTTTTATCACCCTGTATGTTAGGGCAAGATCTCAGCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAATGGAATCTCGCTTCTTaGTGTTGTTATTCACTGGAG +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEWNLAS*CCYSLE
Trigger: CTCCAGTGAATAACAACACAAAGAAGCGAGATTCCA...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTTCTGTGCTGTCAGTTTaGGAATCTCGCTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPSVLSV*ESRFFV
Trigger: CACAAAGAAGCGAGATTCCAAAACTGACAGCACAGA...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CTTAACATGTACCCCAGAACTGTACCTACCACAAATAAAGTTTCCTTAACAGGCTATGTCCTTTTCGATTaGCTGAATTCTGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: LNMYPRTVPTTNKVSLTGYVLFD*LNSGYS
Trigger: AGAATAGCCAGAATTCAGCAAATCGAAAAGGACATA...GCCTGTTAAGGAAACTTTATTTGTGGTAGGTACAGTTCTGGGGTACATGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAACCCCTAGTTCATTCATaGCATGTCTATGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPEPLVHS*HVYALH
Trigger: ATGAAGAGCATAGACATGCAATGAATGAACTAGGGG...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAATAATATTGGCATCCTaGTACTTCGCAGGCCTATTT +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEIILAS*YFAGLF
Trigger: AAATAGGCCTGCGAAGTACAAGGATGCCAATATTAT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTATCACCATAGAGACTTaGCTTGTGTCTCTGCTTACT +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPITIET*LVSLLT
Trigger: AGTAAGCAGAGACACAAGCAAAGTCTCTATGGTGAT...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTGAAAGGACAGTCATGTaGCCAGTATTAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFERTVM*PVLKLS
Trigger: AGACAATTTTAATACTGGCAACATGACTGTCCTTTC...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAAATCGAGGGTTTCATTaGACCTCTTTTACCATAACC +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHENRGFH*TSFTIT
Trigger: GGTTATGGTAAAAGAGGTCAAATGAAACCCTCGATT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAACGTATTCTCACTGCTaGAAGACATATGTTCGGTTT +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHETYSHC*KTYVRF
Trigger: AAACCGAACATATGTCTTCAAGCAGTGAGAATACGT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AAGCAAAGCAGGCTGGGTAAACTTGTTCATCGGGAACCATATTACTGTGAATTTATACTACTGGCATTCTaGGATAAACCTGTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: KQSRLGKLVHREPYYCEFILLAF*DKPVCL
Trigger: CAAACAAACAGGTTTATCCAAGAATGCCAGTAGTAT...AAATTCACAGTAATATGGTTCCCGATGAACAAGTTTACCCAGCCTGCTTTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTCAATATCATGGCGCTTaGCTGGTCTTCCATCATTAT +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPQYHGA*LVFHHY
Trigger: ATAATGATGGAAGACCAGCAAAGCGCCATGATATTG...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 90 bp CTAGAAAGTTCTACCTTTTTATTGGCTCCATTACCATTATTCATCTaGTTTAGTCCTTTGGAGGCAGACTCACTTCTTGGAATACTACTG +
Preference number: 5 (lower is better)
Translates to: LESSTFLLAPLPLFI*FSPLEADSLLGILL
Trigger: CAGTAGTATTCCAAGAAGTGAGTCTGCCTCCAAAGGACTAAATCAGATGAATAATGGTAATGGAGCCAATAAAAAGGTAGAACTTTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATGCTTCATATTCCAATaGCCTTCTGGTCATATCTGT +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPECFIFQ*PSGHIC
Trigger: ACAGATATGACCAGAAGGCAATTGGAATATGAAGCA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp GGAGTCAAATATCTTAGCTCAAGTCATAGCACTTTTATTTACTGGCATTTTAGCCTGGGGAAAAGTGGATaGTTTCTGAAGTATGGGTTT +
Preference number: 5 (lower is better)
Translates to: GVKYLSSSHSTFIYWHFSLGKSG*FLKYGF
Trigger: AAACCCATACTTCAGAAACAATCCACTTTTCCCCAG...GCTAAAATGCCAGTAAATAAAAGTGCTATGACTTGAGCTAAGATATTTGACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257430.9
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTAAGGCTTTTTCTTTTTaGGCATTGCGGAGCTTATAC +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPKAFSF*ALRSLY
Trigger: GTATAAGCTCCGCAATGCCAAAAAAGAAAAAGCCTT...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp TATTATGCTCAATGCTTAGTCTGTGCTAGGCTGCTTGCATTGCTATTACATGAAAAAGTTCCATGTGATTaGAATTTTCTGAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: YYAQCLVCARLLALLLHEKVPCD*NFLSMA
Trigger: TGCCATGCTCAGAAAATTCAAATCACATGGAACTTT...TTCATGTAATAGCAATGCAAGCAGCCTAGCACAGACTAAGCATTGAGCATAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAATATGTCCTTTTCGATTaGCTGAATTCTGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPEYVLFD*LNSGYS
Trigger: AGAATAGCCAGAATTCAGCAAATCGAAAAGGACATA...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCAATAATATTGGCATCCTaGTACTTCGCAGGCCTATTT +
Preference number: 5 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSIILAS*YFAGLF
Trigger: AAATAGGCCTGCGAAGTACAAGGATGCCAATATTAT...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp ATGTTGCCAGTATTAAAATTGTCTGACCTATTATCATCATGTCGATTGGTGTCATCTTCTATTATGTGTTaGGGTCTTGCCCATCTTTCA +
Preference number: 5 (lower is better)
Translates to: MLPVLKLSDLLSSCRLVSSSIMC*GLAHLS
Trigger: TGAAAGATGGGCAAGACCCAAACACATAATAGAAGA...TGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGCAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502371.2
ENST00000508624.5
CDS-3UTR CAA 90 bp AGACCAGTGAAGACAAAGTATACTATCAAATATGGCTTCCAGAACAAAAACCCTGTCCAGATGAACTCTTaGAGAATGAAAATGACTGTT +
Preference number: 5 (lower is better)
Translates to: RPVKTKYTIKYGFQNKNPVQMNS*RMKMTV
Trigger: AACAGTCATTTTCATTCTCAAAGAGTTCATCTGGAC...AGGGTTTTTGTTCTGGAAGCCATATTTGATAGTATACTTTGTCTTCACTGGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS-3UTR CAA 90 bp CACAATTCATGTCTCATTAATAAAAGAGCAGCCATCTCACCTCAAATACCAGAAATACTACTGGCATTCTaGGATAAACCTGTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: HNSCLINKRAAISPQIPEILLAF*DKPVCL
Trigger: CAAACAAACAGGTTTATCCAAGAATGCCAGTAGTAT...TTCTGGTATTTGAGGTGAGATGGCTGCTCTTTTATTAATGAGACATGAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS GCA 90 bp TGTTCTTCCATCGCAACTCTGATTTGCCTTGCTTCATATTCCAATTaGCTTCTGGTCATATCTGTTTGTAAGGAAAAATTTTCAGTTAAA +
Preference number: 5 (lower is better)
Translates to: CSSIATLICLASYSN*LLVISVCKEKFSVK
Trigger: TTTAACTGAAAATTTTTCCTTACAAACAGATATGACCAGAAGGCAATTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAGAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257430.9
ENST00000507379.5
ENST00000508376.6
ENST00000508624.5
ENST00000512211.6
CDS GCA 72 bp CGCCCGGGCTCTTCGTCTCCTGCCGGACGCAGCTCCTaGTGCCGCCGGTGCTCCAGGACCCGAGAACTGAGG +
Preference number: 6 (lower is better)
Translates to: RPGSSSPAGRSS*CRRCSRTRELR
Trigger: CCTCAGTTCTCGGGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGCAGGAGACGAAGAGCCCGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS GCA 72 bp CCAGAAGTACGAGCGCCGCCCGGGCTCTTCGTCTCCTaGCGGACGCAGCTCCTGCTGCCGCCGGTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PEVRAPPGLFVS*RTQLLLPPVLQ
Trigger: CTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGCAGGAGACGAAGAGCCCGGGCGGCGCTCGTACTTCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS GCA 72 bp CCGGGCTCTTCGTCTCCTGCCGGACGCAGCTCCTGCTaGCGCCGGTGCTCCAGGACCCGAGAACTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: PGSSSPAGRSSC*RRCSRTRELRV
Trigger: CACCCTCAGTTCTCGGGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGCAGGAGACGAAGAGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS CAA 72 bp CAGCGGCTAGGCTTCCGGCGGCCACACCCCGCCCCCTaGCTACTTGCCCTCCGCCATCTTGTGGGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: QRLGFRRPHPAP*LLALRHLVGGG
Trigger: CCCACCTCCCACAAGATGGCGGAGGGCAAGTAGCAAGGGGGCGGGGTGTGGCCGCCGGAAGCCTAGCCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509732.5
CDS CCA 72 bp CTTGGCTACCCTTGGACCTGCCAGACGCTCGCCCAGTaGCCAGAAGTACGAGCGCCGCCCGGGCTCTTCGTC +
Preference number: 6 (lower is better)
Translates to: LGYPWTCQTLAQ*PEVRAPPGLFV
Trigger: GACGAAGAGCCCGGGCGGCGCTCGTACTTCTGGCCACTGGGCGAGCGTCTGGCAGGTCCAAGGGTAGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS GCA 72 bp TCGTCTCCTGCCGGACGCAGCTCCTGCTGCCGCCGGTaGTCCAGGACCCGAGAACTGAGGGTGGTACAGAAG +
Preference number: 6 (lower is better)
Translates to: SSPAGRSSCCRR*SRTRELRVVQK
Trigger: CTTCTGTACCACCCTCAGTTCTCGGGTCCTGGAGCACCGGCGGCAGCAGGAGCTGCGTCCGGCAGGAGACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS CCA 72 bp AGTTGTTTAAGTACTTCCTGCCAGACGCTCGCCCAGTaGCCAGAAGTACGAGCGCCGCCCGGGCTCTTCGTC +
Preference number: 6 (lower is better)
Translates to: SCLSTSCQTLAQ*PEVRAPPGLFV
Trigger: GACGAAGAGCCCGGGCGGCGCTCGTACTTCTGGCCACTGGGCGAGCGTCTGGCAGGAAGTACTTAAACAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507379.5
CDS TCA 72 bp GCGTACATAGGGGGCGCCGAGGCCCGAGAAGGCAACTaGGTGCTTCACCTTCCTCACCAACAGCCAACAACA +
Preference number: 6 (lower is better)
Translates to: AYIGGAEAREGN*VLHLPHQQPTT
Trigger: TGTTGTTGGCTGTTGGTGAGGAAGGTGAAGCACTCAGTTGCCTTCTCGGGCCTCGGCGCCCCCTATGTACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505350.1
ENST00000507379.5
CDS CAA 72 bp GCTTTAACAACTGATCATATGAAGCTGCAGCCATCCTaGGCTACCCTTGGACCTGCCAGACGCTCGCCCAGT +
Preference number: 6 (lower is better)
Translates to: ALTTDHMKLQPS*ATLGPARRSPS
Trigger: ACTGGGCGAGCGTCTGGCAGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTTCATATGATCAGTTGTTAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505350.1
CDS TCA 72 bp GTTATTCACTGGAGTTGGGATCTGAGATGGCCGAGCTaGAGTGCTATCTGCGCTGCTTTTCCTAGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: VIHWSWDLRWPS*SAICAAFPRAW
Trigger: CCAAGCCCTAGGAAAAGCAGCGCAGATAGCACTTCAGCTCGGCCATCTCAGATCCCAACTCCAGTGAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 72 bp GCTTTAACAACTGATCATATGAAGCTGCAGCCATCCTaGGCTACCCTTGGACCCCATTTCCGAGTCCGGCAG +
Preference number: 6 (lower is better)
Translates to: ALTTDHMKLQPS*ATLGPHFRVRQ
Trigger: CTGCCGGACTCGGAAATGGGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTTCATATGATCAGTTGTTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508624.5
CDS CAA 72 bp ACTCTGGCAGCAACAGTCCCACTAGGTGAACTGTGTTaGCTTGAGCTGCTAGAACTGAATGGGGTACGTTCC +
Preference number: 6 (lower is better)
Translates to: TLAATVPLGELC*LELLELNGVRS
Trigger: GGAACGTACCCCATTCAGTTCTAGCAGCTCAAGCAAACACAGTTCACCTAGTGGGACTGTTGCTGCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 72 bp GCTTTAACAACTGATCATATGAAGCTGCAGCCATCCTaGGCTACCCTTGGACCTGGGAACAGCATCGAGCCA +
Preference number: 6 (lower is better)
Translates to: ALTTDHMKLQPS*ATLGPGNSIEP
Trigger: TGGCTCGATGCTGTTCCCAGGTCCAAGGGTAGCCAAGGATGGCTGCAGCTTCATATGATCAGTTGTTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509732.5
CDS TCA 72 bp CGCTTCTTTGTGTTGTTATTCACTGGAGTTGGGATCTaGGATGGCCGAGCTGAAGTGCTATCTGCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: RFFVLLFTGVGI*DGRAEVLSALL
Trigger: AAGCAGCGCAGATAGCACTTCAGCTCGGCCATCTCAGATCCCAACTCCAGTGAATAACAACACAAAGAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CCA 72 bp TCAGGAAGGGAAGGACTTAAAACTGGAGTTTGTGCCTaGGACCTAGTGGGAGAAGCTGGTCTAGATGATGGA +
Preference number: 6 (lower is better)
Translates to: SGREGLKTGVCA*DLVGEAGLDDG
Trigger: TCCATCATCTAGACCAGCTTCTCCCACTAGGTCCCAGGCACAAACTCCAGTTTTAAGTCCTTCCCTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 90 bp GGGTTCCACTGGATTCTGTGCTGTCAGTTTTGGAATCTCGCTTCTTaGTGTTGTTATTCACTGGAGTTGGGATCTGAGATGGCCGAGCTG +
Preference number: 6 (lower is better)
Translates to: GFHWILCCQFWNLAS*CCYSLELGSEMAEL
Trigger: CAGCTCGGCCATCTCAGATCCCAACTCCAGTGAATAACAACACAAAGAAGCGAGATTCCAAAACTGACAGCACAGAATCCAGTGGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 72 bp CTGAGATTAGGTGGGAGTTTTCGCCATCCACCAGCCTaGACAGACGAATGTGTGGATAGAGACATATCAGGA +
Preference number: 6 (lower is better)
Translates to: LRLGGSFRHPPA*TDECVDRDISG
Trigger: TCCTGATATGTCTCTATCCACACATTCGTCTGTTCAGGCTGGTGGATGGCGAAAACTCCCACCTAATCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 72 bp GTGGTGACGTTGTCCTTCCTCCCTCCCACAGACATCTaGCAGTATCTGGAGACAATTTTGATCGGCATAACT +
Preference number: 6 (lower is better)
Translates to: VVTLSFLPPTDI*QYLETILIGIT
Trigger: AGTTATGCCGATCAAAATTGTCTCCAGATACTGTCAGATGTCTGTGGGAGGGAGGAAGGACAACGTCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505084.1
CDS CCA 72 bp CTGGCTATTCTTCGCTGTGCTCGTTTTTCCATATCCTaGCAGGTACCTAGTTGTTCTTCCATCGCAACTCTG +
Preference number: 6 (lower is better)
Translates to: LAILRCARFSIS*QVPSCSSIATL
Trigger: CAGAGTTGCGATGGAAGAACAACTAGGTACCTGCCAGGATATGGAAAAACGAGCACAGCGAAGAATAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257430.9
ENST00000508376.6
ENST00000508624.5
ENST00000512211.6
CDS CAA 90 bp AAAGGAGTCACTCTGGCAGCAACAGTCCCACTAGGTGAACTGTGTTaGCTTGAGCTGCTAGAACTGAATGGGGTACGTTCCACTATAGAA +
Preference number: 6 (lower is better)
Translates to: KGVTLAATVPLGELC*LELLELNGVRSTIE
Trigger: TTCTATAGTGGAACGTACCCCATTCAGTTCTAGCAGCTCAAGCAAACACAGTTCACCTAGTGGGACTGTTGCTGCCAGAGTGACTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 90 bp ATCACCGGGGGAGTATTACCTGTGGGAGATCTTCCAGATCTAGGATaGTTAATGGGACAGTCCTCAATTCTCACCCAAACATCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: ITGGVLPVGDLPDLG*LMGQSSILTQTSSV
Trigger: AACAGAGGATGTTTGGGTGAGAATTGAGGACTGTCCCATTAACAATCCTAGATCTGGAAGATCTCCCACAGGTAATACTCCCCCGGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 90 bp TGTCAGTTTTGGAATCTCGCTTCTTTGTGTTGTTATTCACTGGAGTaGGGATCTGAGATGGCCGAGCTGAAGTGCTATCTGCGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: CQFWNLASLCCYSLE*GSEMAELKCYLRCF
Trigger: AAAGCAGCGCAGATAGCACTTCAGCTCGGCCATCTCAGATCCCAACTCCAGTGAATAACAACACAAAGAAGCGAGATTCCAAAACTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 90 bp TGGCGCTTAGGACTTTGGGTTCCACTGGATTCTGTGCTGTCAGTTTaGGAATCTCGCTTCTTTGTGTTGTTATTCACTGGAGTTGGGATC +
Preference number: 6 (lower is better)
Translates to: WRLGLWVPLDSVLSV*ESRFFVLLFTGVGI
Trigger: GATCCCAACTCCAGTGAATAACAACACAAAGAAGCGAGATTCCAAAACTGACAGCACAGAATCCAGTGGAACCCAAAGTCCTAAGCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 72 bp TCCTTCCCGGCTTCCATAAGAACGGAGGGACATTTTTaGCCGCAGTTTTACTCCAGGGAAATTACTGCTATC +
Preference number: 6 (lower is better)
Translates to: SFPASIRTEGHF*PQFYSREITAI
Trigger: GATAGCAGTAATTTCCCTGGAGTAAAACTGCGGTCAAAAATGTCCCTCCGTTCTTATGGAAGCCGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257430.9
ENST00000507379.5
ENST00000508376.6
ENST00000508624.5
ENST00000509732.5
ENST00000512211.6
CDS TCA 72 bp CCTGGCAGGTACCTAGTTGTTCTTCCATCGCAACTCTaGTTTGCCTTGCTTCATATTCCAATTGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PGRYLVVLPSQL*FALLHIPIAFW
Trigger: CCAGAAGGCAATTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAGAACAACTAGGTACCTGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257430.9
ENST00000507379.5
ENST00000508376.6
ENST00000508624.5
ENST00000512211.6
CDS GCA 72 bp GTGCTTACTCGAGGAAGGGATGATGAATGTTTGCTGTaGTCACGTTTCCAGGTTCCTGACCTATTGATTGGA +
Preference number: 6 (lower is better)
Translates to: VLTRGRDDECLL*SRFQVPDLLIG
Trigger: TCCAATCAATAGGTCAGGAACCTGGAAACGTGAGCACAGCAAACATTCATCATCCCTTCCTCGAGTAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CCA 72 bp TCCATCATTATACTCTATAGTGGGACTGAGATTAGGTaGGAGTTTTCGCCATCCACCAGCCTGAACAGACGA +
Preference number: 6 (lower is better)
Translates to: SIIILYSGTEIR*EFSPSTSLNRR
Trigger: TCGTCTGTTCAGGCTGGTGGATGGCGAAAACTCCCACCTAATCTCAGTCCCACTATAGAGTATAATGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 72 bp TTTCCACTAGATTCACATCAGCCATCTGCAGCGGTTTaGTCTCCTCTCTCTTTTGGCCACCAATGCATGTGT +
Preference number: 6 (lower is better)
Translates to: FPLDSHQPSAAV*SPLSFGHQCMC
Trigger: ACACATGCATTGGTGGCCAAAAGAGAGAGGAGACAAAACCGCTGCAGATGGCTGATGTGAATCTAGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508376.6
ENST00000512211.6
CDS CAA 90 bp TTAAACAGATGTCACAAGGTAAGACCCAGAATGGCGCTTAGGACTTaGGGTTCCACTGGATTCTGTGCTGTCAGTTTTGGAATCTCGCTT +
Preference number: 6 (lower is better)
Translates to: LNRCHKVRPRMALRT*GSTGFCAVSFGISL
Trigger: AAGCGAGATTCCAAAACTGACAGCACAGAATCCAGTGGAACCCAAAGTCCTAAGCGCCATTCTGGGTCTTACCTTGTGACATCTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 72 bp TTCTCTGCTTCCATTTACAAACCCTCTTCTTGGAAATaGACCCATAGGAACAGGACTGCACTCTCCAGAACG +
Preference number: 6 (lower is better)
Translates to: FSASIYKPSSWK*THRNRTALSRT
Trigger: CGTTCTGGAGAGTGCAGTCCTGTTCCTATGGGTTCATTTCCAAGAAGAGGGTTTGTAAATGGAAGCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257430.9
ENST00000507379.5
ENST00000508376.6
ENST00000508624.5
ENST00000512211.6
CDS TCA 72 bp AAAGGTACACTTATACCAGTGATTCTTAATTGGTGGTaGCGTTGTCCTTCCTCCCTCCCACAGACATCTGAC +
Preference number: 6 (lower is better)
Translates to: KGTLIPVILNWW*RCPSSLPQTSD
Trigger: GTCAGATGTCTGTGGGAGGGAGGAAGGACAACGTCACCACCAATTAAGAATCACTGGTATAAGTGTACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505084.1
CDS CAA 72 bp ATCCTTCCCGGCTTCCATAAGAACGGAGGGACATTTTaGACCGCAGTTTTACTCCAGGGAAATTACTGCTAT +
Preference number: 6 (lower is better)
Translates to: ILPGFHKNGGTF*TAVLLQGNYCY
Trigger: ATAGCAGTAATTTCCCTGGAGTAAAACTGCGGTCAAAAATGTCCCTCCGTTCTTATGGAAGCCGGGAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257430.9
ENST00000507379.5
ENST00000508376.6
ENST00000508624.5
ENST00000509732.5
ENST00000512211.6
CDS TCA 72 bp GACCTATTGATTGGAAGTCTAGAAGGACTTTCAGAATaGGACCGTGCAATATCATGGCGCTTTGCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: DLLIGSLEGLSE*DRAISWRFAGL
Trigger: AAGACCAGCAAAGCGCCATGATATTGCACGGTCTCATTCTGAAAGTCCTTCTAGACTTCCAATCAATAGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CCA 72 bp TTCAGAATGAGACCGTGCAATATCATGGCGCTTTGCTaGTCTTCCATCATTATACTCTATAGTGGGACTGAG +
Preference number: 6 (lower is better)
Translates to: FRMRPCNIMALC*SSIIILYSGTE
Trigger: CTCAGTCCCACTATAGAGTATAATGATGGAAGACCAGCAAAGCGCCATGATATTGCACGGTCTCATTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 72 bp GGAGTATTACCTGTGGGAGATCTTCCAGATCTAGGATaGTTAATGGGACAGTCCTCAATTCTCACCCAAACA +
Preference number: 6 (lower is better)
Translates to: GVLPVGDLPDLG*LMGQSSILTQT
Trigger: TGTTTGGGTGAGAATTGAGGACTGTCCCATTAACAATCCTAGATCTGGAAGATCTCCCACAGGTAATACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 72 bp GGACTTTGGGTTCCACTGGATTCTGTGCTGTCAGTTTaGGAATCTCGCTTCTTTGTGTTGTTATTCACTGGA +
Preference number: 6 (lower is better)
Translates to: GLWVPLDSVLSV*ESRFFVLLFTG
Trigger: TCCAGTGAATAACAACACAAAGAAGCGAGATTCCAAAACTGACAGCACAGAATCCAGTGGAACCCAAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 90 bp AGTCCTTTGGAGGCAGACTCACTTCTTGGAATACTACTGGCATTCTaGGATAAACCTGTTTGTTTGGTAAGGTTCTGTTGGCTCATCTGT +
Preference number: 6 (lower is better)
Translates to: SPLEADSLLGILLAF*DKPVCLVRFCWLIC
Trigger: ACAGATGAGCCAACAGAACCTTACCAAACAAACAGGTTTATCCAAGAATGCCAGTAGTATTCCAAGAAGTGAGTCTGCCTCCAAAGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS GCA 72 bp CAGGTACCTAGTTGTTCTTCCATCGCAACTCTGATTTaGCTTGCTTCATATTCCAATTGCCTTCTGGTCATA +
Preference number: 6 (lower is better)
Translates to: QVPSCSSIATLI*LASYSNCLLVI
Trigger: TATGACCAGAAGGCAATTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAGAACAACTAGGTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257430.9
ENST00000507379.5
ENST00000508376.6
ENST00000508624.5
ENST00000512211.6
CDS GCA 72 bp ACTTTCAGAATGAGACCGTGCAATATCATGGCGCTTTaGTGGTCTTCCATCATTATACTCTATAGTGGGACT +
Preference number: 6 (lower is better)
Translates to: TFRMRPCNIMAL*WSSIIILYSGT
Trigger: AGTCCCACTATAGAGTATAATGATGGAAGACCAGCAAAGCGCCATGATATTGCACGGTCTCATTCTGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 72 bp GGAATACTACTGGCATTCTTGGATAAACCTGTTTGTTaGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGA +
Preference number: 6 (lower is better)
Translates to: GILLAFLDKPVC*VRFCWLICLPG
Trigger: TCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAACAGGTTTATCCAAGAATGCCAGTAGTATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 72 bp GAGGCAGACTCACTTCTTGGAATACTACTGGCATTCTaGGATAAACCTGTTTGTTTGGTAAGGTTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: EADSLLGILLAF*DKPVCLVRFCW
Trigger: CCAACAGAACCTTACCAAACAAACAGGTTTATCCAAGAATGCCAGTAGTATTCCAAGAAGTGAGTCTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CCA 72 bp AAGGTTGGGCTTGGAGCTTCTTTGATGAAAGTTGACTaGCGTACTAATACAGGTCTTTCTGATCTATCAGAT +
Preference number: 6 (lower is better)
Translates to: KVGLGASLMKVD*RTNTGLSDLSD
Trigger: ATCTGATAGATCAGAAAGACCTGTATTAGTACGCCAGTCAACTTTCATCAAAGAAGCTCCAAGCCCAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CAA 90 bp TCACTTCTTGGAATACTACTGGCATTCTTGGATAAACCTGTTTGTTaGGTAAGGTTCTGTTGGCTCATCTGTCTACCTGGAGATGTATAT +
Preference number: 6 (lower is better)
Translates to: SLLGILLAFLDKPVC*VRFCWLICLPGDVY
Trigger: ATATACATCTCCAGGTAGACAGATGAGCCAACAGAACCTTACCAAACAAACAGGTTTATCCAAGAATGCCAGTAGTATTCCAAGAAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 72 bp GATTCAGCACCATTTGTAGCACCTGAGGAAACGGTCTaGGAAGTACTATTTGTGGGAGAAAATTCATTTTCT +
Preference number: 6 (lower is better)
Translates to: DSAPFVAPEETV*EVLFVGENSFS
Trigger: AGAAAATGAATTTTCTCCCACAAATAGTACTTCTCAGACCGTTTCCTCAGGTGCTACAAATGGTGCTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS TCA 72 bp GTGCTGACAAATTCCATAAGGCACTCAATACGCTTTTaGGGGTTGATTCCTAGTTCATTCATTGCATGTCTA +
Preference number: 6 (lower is better)
Translates to: VLTNSIRHSIRF*GLIPSSFIACL
Trigger: TAGACATGCAATGAATGAACTAGGAATCAACCCTCAAAAGCGTATTGAGTGCCTTATGGAATTTGTCAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502371.2
CDS GCA 72 bp AAAGAATTGAAGATGAACTTCCAGTTCTTCTCCAAGTaGTTACTCGAGGAAGGGATGATGAATGTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: KELKMNFQFFSK*LLEEGMMNVCC
Trigger: ACAGCAAACATTCATCATCCCTTCCTCGAGTAAGCACTTGGAGAAGAACTGGAAGTTCATCTTCAATTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257430.9
ENST00000508376.6
CDS CCA 72 bp GTATACGAAGTATGTCCTTTTCGATTTGCTGAATTCTaGCTATTCTTCGCTGTGCTCGTTTTTCCATATCCT +
Preference number: 6 (lower is better)
Translates to: VYEVCPFRFAEF*LFFAVLVFPYP
Trigger: AGGATATGGAAAAACGAGCACAGCGAAGAATAGCCAGAATTCAGCAAATCGAAAAGGACATACTTCGTATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257430.9
ENST00000508376.6
ENST00000508624.5
ENST00000512211.6