RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APBB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163697

Ensembl transcript IDs: ENST00000295974.12, ENST00000502682.1, ENST00000502687.1, ENST00000502841.5, ENST00000503264.5, ENST00000503503.5, ENST00000503555.5, ENST00000504305.5, ENST00000504484.5, ENST00000506352.5, ENST00000506999.5, ENST00000507831.5, ENST00000508593.6, ENST00000508676.5, ENST00000508707.5, ENST00000509446.5, ENST00000509475.5, ENST00000510670.5, ENST00000510925.5, ENST00000511572.5, ENST00000512510.5, ENST00000513140.5, ENST00000513493.1, ENST00000513516.5, ENST00000513611.5, ENST00000514094.5, ENST00000514920.5, ENST00000543538.5

Found 1301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATCTGCTGGCGGTGGAGGTGGTCGAACTTTCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGATATCGTAACATGCAGGCGGCCTGCA +
Preference number: 1 (lower is better)
Translates to: NLLAVEVVELSEKAA*LPSTSDIVTCRRPA
Trigger: TGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR CCA 90 bp CACTCAAAGCGCTGGTTCCCCGTGTCCATGATGAAGGCAAATGTGTaGACGTCCTTCCCAACACCCATGAAGGACAGGAATCGCACACGA +
Preference number: 1 (lower is better)
Translates to: HSKRWFPVSMMKANV*TSFPTPMKDRNRTR
Trigger: TCGTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR CCA 90 bp GATATGGAGGCAGCACAACACAGCAAGAACGGGCTTTGGGAGCCGTaGGTCCTAGTCCTGGTTTTCATGAACTTTGGTGAGATCTTAGGC +
Preference number: 1 (lower is better)
Translates to: DMEAAQHSKNGLWEP*VLVLVFMNFGEILG
Trigger: GCCTAAGATCTCACCAAAGTTCATGAAAACCAGGACTAGGACCCACGGCTCCCAAAGCCCGTTCTTGCTGTGTTGTGCTGCCTCCATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR TCA 90 bp GCTCTTCTTAGTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTaGCGGATATGGAGGCAGCACAACACAGCAAGAACGGGCTTTGGG +
Preference number: 1 (lower is better)
Translates to: ALLSICPESFWKGSS*RIWRQHNTARTGFG
Trigger: CCCAAAGCCCGTTCTTGCTGTGTTGTGCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATACTAAGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR TCA 90 bp AAGCTGCTCTGGAGGCCAGGAACTACTGCTTGCGTTGACACGGTGTaGGTGGGTATCTTTGCCCTGAAGCTGAAGTTAAACTTTCTACTG +
Preference number: 1 (lower is better)
Translates to: KLLWRPGTTACVDTV*VGIFALKLKLNFLL
Trigger: CAGTAGAAAGTTTAACTTCAGCTTCAGGGCAAAGATACCCACTCACACCGTGTCAACGCAAGCAGTAGTTCCTGGCCTCCAGAGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR GCA 90 bp AAAGGGCATAAAGGAAAACAAAGCGTTCTTTCAGGGGAAGTAAGCTaGTCTGGAGGCCAGGAACTACTGCTTGCGTTGACACGGTGTGAG +
Preference number: 1 (lower is better)
Translates to: KGHKGKQSVLSGEVS*SGGQELLLALTRCE
Trigger: CTCACACCGTGTCAACGCAAGCAGTAGTTCCTGGCCTCCAGAGCAGCTTACTTCCCCTGAAAGAACGCTTTGTTTTCCTTTATGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR TCA 90 bp GCTTTGGGAGCCGTGGGTCCTAGTCCTGGTTTTCATGAACTTTGGTaGGATCTTAGGCCAGTGGGTTTAGCCTCTCGGTACTTCATATTT +
Preference number: 1 (lower is better)
Translates to: ALGAVGPSPGFHELW*DLRPVGLASRYFIF
Trigger: AAATATGAAGTACCGAGAGGCTAAACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAAACCAGGACTAGGACCCACGGCTCCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR GCA 90 bp AGACAGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATaGAGAATTCCAGCAGAACGTTTACCTCTAGCACATGGACTAGCA +
Preference number: 1 (lower is better)
Translates to: RQLSGQKASEGDRAG*RIPAERLPLAHGLA
Trigger: TGCTAGTCCATGTGCTAGAGGTAAACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR TCA 90 bp GCACGCTGTAGGAAAACAGTCCTGGACTTAGATAGGGCACCATCATaGATACCACTGCGTAAGGAATTTGGACATCTTTCTCCCACTCGT +
Preference number: 1 (lower is better)
Translates to: ARCRKTVLDLDRAPS*IPLRKEFGHLSPTR
Trigger: ACGAGTGGGAGAAAGATGTCCAAATTCCTTACGCAGTGGTATTCATGATGGTGCCCTATCTAAGTCCAGGACTGTTTTCCTACAGCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR TCA 90 bp AATATCACAATCCTAGCAAGACCGCTTACAAAAGACTCGAGTTGGTaGCTAAATAGGCTTCTATGTCCGGAAGGCCAGCTGGCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: NITILARPLTKDSSW*LNRLLCPEGQLAFL
Trigger: CAGGAAGGCCAGCTGGCCTTCCGGACATAGAAGCCTATTTAGTCACCAACTCGAGTCTTTTGTAAGCGGTCTTGCTAGGATTGTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR CCA 90 bp TTGTCATGTTGTGGTGAAATCTTGAGGAGTTTGTGTTGCAATGCCTaGGACATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTT +
Preference number: 1 (lower is better)
Translates to: LSCCGEILRSLCCNA*DMNGPYKQRKALGL
Trigger: AAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCATGTCCCAGGCATTGCAACACAAACTCCTCAAGATTTCACCACAACATGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR CCA 90 bp GGTTTGTCTACAGGTAACATGCCCAAGTACTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGTGTTGGAAAATCTACTTGCAAAGGG +
Preference number: 1 (lower is better)
Translates to: GLSTGNMPKYCTWNF*TSSVFGVGKSTCKG
Trigger: CCCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGGCATGTTACCTGTAGACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR GCA 90 bp GGAAAATGCTTGTCATGTTGTGGTGAAATCTTGAGGAGTTTGTGTTaGAATGCCTGGGACATGAACGGGCCATACAAACAGAGGAAAGCT +
Preference number: 1 (lower is better)
Translates to: GKCLSCCGEILRSLC*NAWDMNGPYKQRKA
Trigger: AGCTTTCCTCTGTTTGTATGGCCCGTTCATGTCCCAGGCATTGCAACACAAACTCCTCAAGATTTCACCACAACATGACAAGCATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR GCA 90 bp CAAACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATaGAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGG +
Preference number: 1 (lower is better)
Translates to: QTRHPIFTAIQWYLL*SAYSNVENRAKCCR
Trigger: CCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR TCA 90 bp GTGTCAAAGAGCTTGTCAGGGAAAGCTGCCAGTTGGTTTCTATACTaGTGCCAACAGCCAATTTTGTCAACCAACAGGTTCAATTTTATG +
Preference number: 1 (lower is better)
Translates to: VSKSLSGKAASWFLY*CQQPILSTNRFNFM
Trigger: CATAAAATTGAACCTGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCTTTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR TCA 90 bp TCCAGGCAATGGCCTTGTGTCGAGTCATCTTACAAGTGTCCATCTTaGAATCATAAAGTGGATTTAAAAAGAAGTAGCAGTGCCACAGTT +
Preference number: 1 (lower is better)
Translates to: SRQWPCVESSYKCPS*NHKVDLKRSSSATV
Trigger: AACTGTGGCACTGCTACTTCTTTTTAAATCCACTTTATGATTTCAAGATGGACACTTGTAAGATGACTCGACACAAGGCCATTGCCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR GCA 90 bp AAACACAAACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTaGTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCT +
Preference number: 1 (lower is better)
Translates to: KHKLAILFLQQFNGI*YAVPTPMLKTGQSA
Trigger: AGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp GCCTGGCTACCAAGCACTTCTGATATCGTAACATGCAGGCGGCCTGCACCGCCTCCTTCCCAACACCCATaGAGGACAGGAATCGCACAC +
Preference number: 2 (lower is better)
Translates to: AWLPSTSDIVTCRRPAPPPSQHP*RTGIAH
Trigger: GTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGG...AGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR-3UTR CCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 2 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp GCCTGGCTACCAAGCACTTCTGATATCGTAACATGCAGGCGGCCTGCACCGCCTCTCAGTCTTTGGTGTTaGAAAATCTACTTGCAAAGG +
Preference number: 2 (lower is better)
Translates to: AWLPSTSDIVTCRRPAPPLSLWC*KIYLQR
Trigger: CCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAG...AGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGCATCAGCAACTGGATaGAAGGTCGGATGGCGGAGT +
Preference number: 2 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHASATG*KVGWRS
Trigger: ACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp AGCACTTCTGATATCGTAACATGCAGGCGGCCTGCACCGCCTCAGACACGTTACGACCAGCTCAGTCTTTaGTGTTGGAAAATCTACTTG +
Preference number: 2 (lower is better)
Translates to: STSDIVTCRRPAPPQTRYDQLSL*CWKIYL
Trigger: CAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTC...GTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR-3UTR TCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCGCCATGGACAATACATaGTGGACAGACAGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSAMDNT*WTDSFL
Trigger: CAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGC...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR TCA 90 bp TGCAGCTATGGCATTTCGGTGACAGGGCGTTTCTGTTTCAAAGTGTCAATGAGGGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 2 (lower is better)
Translates to: CSYGISVTGRFCFKVSMRATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...CCTCATTGACACTTTGAAACAGAAACGCCCTGTCACCGAAATGCCATAGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 2 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 2 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 2 (lower is better)
Translates to: DSETNSRIIHSKDAALVHQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 2 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp ATTTCGGTGACAGGGCGTTTCTGTTTCAAAGTGTCAATGAGGGATAAGACCCCTCCCAAGTACTGCACGTaGAACTTCTGGACCAGCTCA +
Preference number: 2 (lower is better)
Translates to: ISVTGRFCFKVSMRDKTPPKYCT*NFWTSS
Trigger: TGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGG...AGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAACGCCCTGTCACCGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR-3UTR TCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCCTTAAAGGTTGCTTGTaGCAGGTCCAGCCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: AVDMKWCPCVKELVRESCLKGCL*QVQPRR
Trigger: TCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAG...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTAAATCACACATGTTGTaGAGGGTAGAAAAACGAAGC +
Preference number: 2 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLKSHML*RVEKRS
Trigger: GCTTCGTTTTTCTACCCTTCACAACATGTGTGATTT...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 2 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCGCATCAGCAACTGGATaGAAGGTCGGATGGCGGAGT +
Preference number: 2 (lower is better)
Translates to: SCFFSYHMMVARRENMLVASATG*KVGWRS
Trigger: ACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGC...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCTCTTTTCATATCACATaGTGGTGGCAAGACGAGAGA +
Preference number: 2 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSSFHIT*WWQDER
Trigger: TCTCTCGTCTTGCCACCATCATGTGATATGAAAAGA...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR TCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTACCTTCCACTGCGCATaGTGTAACTTACAGCAAAAA +
Preference number: 2 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVTFHCA*CNLQQK
Trigger: TTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGT...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR-3UTR GCA 90 bp ATTTCGGTGACAGGGCGTTTCTGTTTCAAAGTGTCAATGAGGGATAAGACCCCTTGTCTACAGGTAACATaGCCAAGTACTGCACGTGGA +
Preference number: 2 (lower is better)
Translates to: ISVTGRFCFKVSMRDKTPCLQVT*PSTARG
Trigger: TCCACGTGCAGTACTTGGGCATGTTACCTGTAGACA...AGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAACGCCCTGTCACCGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR-3UTR CCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 2 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTTTGTCTAACACTGCTTaGTTAAGGGTAAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLLSNTA*LRVNSL
Trigger: CAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAA...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGCTGTAGACATGAAATaGTGTCCATGTGTCAAAGAG +
Preference number: 2 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQAVDMK*CPCVKE
Trigger: CTCTTTGACACATGGACACCATTTCATGTCTACAGC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR CAA 90 bp TTCTGTTTCAAAGTGTCAATGAGGGATAAGACCCCTCGTTTTACATaGGTTGTGACTCTTCTGGTTACTGAATCTGCTGGCGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: FCFKVSMRDKTPRFT*VVTLLVTESAGGGG
Trigger: ACCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGAAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR-3UTR TCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTACTACAGCGACCGAGATaGAAGATCACTGTAAATGAT +
Preference number: 2 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLLQRPR*KITVND
Trigger: ATCATTTACAGTGATCTTTCATCTCGGTCGCTGTAG...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR GCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 2 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR GCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 2 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR GCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCCAATGGTATCTGCTATaGAGTGCCTACTCCAATGTT +
Preference number: 2 (lower is better)
Translates to: AVDMKWCPCVKELVRESCQWYLL*SAYSNV
Trigger: AACATTGGAGTAGGCACTGCATAGCAGATACCATTG...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR GCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCCAATTCAATGGTATCTaGTATGCAGTGCCTACTCCA +
Preference number: 2 (lower is better)
Translates to: AVDMKWCPCVKELVRESCQFNGI*YAVPTP
Trigger: TGGAGTAGGCACTGCATAGCAGATACCATTGAATTG...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 2 (lower is better)
Translates to: DSETNSRIIHSKDAALVHGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACACCTTCCACTGCGCATaGTGTAACTTACAGCAAAAA +
Preference number: 2 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDTFHCA*CNLQQK
Trigger: TTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGT...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCACCTTCCACTGCGCATaGTGTAACTTACAGCAAAAA +
Preference number: 2 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCTFHCA*CNLQQK
Trigger: TTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGT...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAACTTAAAGGTTGCTTGTaGCAGGTCCAGCCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQLKGCL*QVQPRR
Trigger: TCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAG...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp CATACTTTCATACATACTTTTTGGCCATGGCAGAAAGTGTCTGAACATACTCTTTGGAAAGGCTCTTCCTaGCGGATATGGAGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: HTFIHTFWPWQKVSEHTLWKGSS*RIWRQH
Trigger: GTGCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCA...AAGAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 2 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTATTGTCTAACACTGCTTaGTTAAGGGTAAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLLSNTA*LRVNSL
Trigger: CAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAA...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR CAA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTaGTTAAACAGTCCATTACTCCTGTGTAGACTTTGCTCAGGTATG +
Preference number: 2 (lower is better)
Translates to: SHLHTKEQENAVLGN*LNSPLLLCRLCSGM
Trigger: CATACCTGAGCAAAGTCTACACAGGAGTAATGGACTGTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCTTTTCATATCACATaGTGGTGGCAAGACGAGAGA +
Preference number: 2 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYSFHIT*WWQDER
Trigger: TCTCTCGTCTTGCCACCATCATGTGATATGAAAAGA...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTTGTCTAACACTGCTTaGTTAAGGGTAAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCLSNTA*LRVNSL
Trigger: CAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCTTGTCTAACACTGCTTaGTTAAGGGTAAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFLSNTA*LRVNSL
Trigger: CAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAA...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR GCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 2 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTATTGTCTAACACTGCTTaGTTAAGGGTAAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: QEDSETNSRIIHSKDAALLSNTA*LRVNSL
Trigger: CAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAA...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR TCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTATAAGGCAGAAGTTTaGAATATGTCCCACCCAAAA +
Preference number: 2 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETYKAEV*NMSHPK
Trigger: TTTTGGGTGGGACATATTTCAAACTTCTGCCTTATA...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR-3UTR GCA 90 bp CATACTTTCATACATACTTTTTGGCCATGGCAGAAAGTGTCTGAACATACTCTTCTTGTCAGGGAAAGCTaGCAGTTGGTTTCTATACTG +
Preference number: 2 (lower is better)
Translates to: HTFIHTFWPWQKVSEHTLLVRES*QLVSIL
Trigger: CAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAG...AAGAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR TCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATTTTCATGAACTTTGGTaGGATCTTAGGCCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHFHELW*DLRPVG
Trigger: ACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAA...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CCA 90 bp CATACTTTCATACATACTTTTTGGCCATGGCAGAAAGTGTCTGAACATACTCTTGCTGTAGACATGAAATaGTGTCCATGTGTCAAAGAG +
Preference number: 2 (lower is better)
Translates to: HTFIHTFWPWQKVSEHTLAVDMK*CPCVKE
Trigger: CTCTTTGACACATGGACACCATTTCATGTCTACAGC...AAGAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR TCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATGTTGTGGTGAAATCTTaGGGAGTTTGTGTTGCAATG +
Preference number: 2 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHVVVKS*GVCVAM
Trigger: CATTGCAACACAAACTCCTCAAGATTTCACCACAAC...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR TCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATGCTCCATTACTAAAGTaGTTTCTAAGAAGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHAPLLK*FLRSLR
Trigger: CCTCAGACTTCTTAGAAATCACTTTAGTAATGGAGC...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR GCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATGAAGGAGCAGGAAAATaGTGTTTTGGGAAACTTGTT +
Preference number: 2 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHEGAGK*CFGKLV
Trigger: AACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTC...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR GCA 90 bp CATACTTTCATACATACTTTTTGGCCATGGCAGAAAGTGTCTGAACATACTCTTGCTCTTCTTAGTATATaGCCAGAATCATTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: HTFIHTFWPWQKVSEHTLALLSI*PESFWK
Trigger: TTTCCAGAATGATTCTGGGCATATACTAAGAAGAGC...AAGAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATTTTACCTCTAGCACATaGACTAGCAAAAATCACACG +
Preference number: 2 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHFTSST*TSKNHT
Trigger: CGTGTGATTTTTGCTAGTCCATGTGCTAGAGGTAAA...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR GCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATGCTCTTCTTAGTATATaGCCAGAATCATTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHALLSI*PESFWK
Trigger: TTTCCAGAATGATTCTGGGCATATACTAAGAAGAGC...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATTGTAATTTGTTGCCATaGACAATACATGATGGACAG +
Preference number: 2 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHCNLLP*TIHDGQ
Trigger: CTGTCCATCATGTATTGTCCATGGCAACAAATTACA...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR GCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATCCTAATGTAATTTGTTaGCATGGACAATACATGATG +
Preference number: 2 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHPNVIC*HGQYMM
Trigger: CATCATGTATTGTCCATGGCAACAAATTACATTAGG...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR CCA 72 bp GCGGTGGAGGTGGTCGAACTTTCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGATATCGTAACATGCAGG +
Preference number: 3 (lower is better)
Translates to: AVEVVELSEKAA*LPSTSDIVTCR
Trigger: CCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACCTCCACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR CCA 72 bp GATATGGAGGCAGCACAACACAGCAAGAACGGGCTTTaGGAGCCGTGGGTCCTAGTCCTGGTTTTCATGAAC +
Preference number: 3 (lower is better)
Translates to: DMEAAQHSKNGL*EPWVLVLVFMN
Trigger: GTTCATGAAAACCAGGACTAGGACCCACGGCTCCCAAAGCCCGTTCTTGCTGTGTTGTGCTGCCTCCATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CAA 90 bp TGGCGGTGGAGGTGGTCGAACTTTCTGAGAAGGCGGCCTGGCTACCAAGCACTTAGCCAGTCCTCCTTGTaGGATGAGGTCATAAGATTT +
Preference number: 3 (lower is better)
Translates to: WRWRWSNFLRRRPGYQALSQSSL*DEVIRF
Trigger: AAATCTTATGACCTCATCCAACAAGGAGGACTGGCT...AAGTGCTTGGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACCTCCACCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR TCA 72 bp GCCGTGGGTCCTAGTCCTGGTTTTCATGAACTTTGGTaGGATCTTAGGCCAGTGGGTTTAGCCTCTCGGTAC +
Preference number: 3 (lower is better)
Translates to: AVGPSPGFHELW*DLRPVGLASRY
Trigger: GTACCGAGAGGCTAAACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAAACCAGGACTAGGACCCACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CAA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTTCGTTCCCCTTGATGTaGCCAAGGAGCAGATGTATG +
Preference number: 3 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLSFPLM*PRSRCM
Trigger: CATACATCTGCTCCTTGGCAACATCAAGGGGAACGA...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CAA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTAGGGAAAGCTGCCAGTaGGTTTCTATACTGATGCCA +
Preference number: 3 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLRESCQ*VSILMP
Trigger: TGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCT...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CAA 90 bp CTCTTCTGGTTACTGAATCTGCTGGCGGTGGAGGTGGTCGAACTTTCTGAGAAGGACAGCCAGTCCTCCTaGTTGGATGAGGTCATAAGA +
Preference number: 3 (lower is better)
Translates to: LFWLLNLLAVEVVELSEKDSQSS*LDEVIR
Trigger: TCTTATGACCTCATCCAACAAGGAGGACTGGCTGTC...CTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCAGATTCAGTAACCAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR TCA 72 bp TGGAGGCCAGGAACTACTGCTTGCGTTGACACGGTGTaGGTGGGTATCTTTGCCCTGAAGCTGAAGTTAAAC +
Preference number: 3 (lower is better)
Translates to: WRPGTTACVDTV*VGIFALKLKLN
Trigger: GTTTAACTTCAGCTTCAGGGCAAAGATACCCACTCACACCGTGTCAACGCAAGCAGTAGTTCCTGGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR CCA 72 bp AAAACAAAGCGTTCTTTCAGGGGAAGTAAGCTGCTCTaGAGGCCAGGAACTACTGCTTGCGTTGACACGGTG +
Preference number: 3 (lower is better)
Translates to: KTKRSFRGSKLL*RPGTTACVDTV
Trigger: CACCGTGTCAACGCAAGCAGTAGTTCCTGGCCTCCAGAGCAGCTTACTTCCCCTGAAAGAACGCTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CAA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGTGCCTACTCCAATGTaGAAAACAGGGCAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQVPTPM*KTGQSA
Trigger: AGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR TCA 72 bp AGTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTaGCGGATATGGAGGCAGCACAACACAGCAAGAACG +
Preference number: 3 (lower is better)
Translates to: SICPESFWKGSS*RIWRQHNTART
Trigger: CGTTCTTGCTGTGTTGTGCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR TCA 72 bp ATCCTAGCAAGACCGCTTACAAAAGACTCGAGTTGGTaGCTAAATAGGCTTCTATGTCCGGAAGGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: ILARPLTKDSSW*LNRLLCPEGQL
Trigger: CAGCTGGCCTTCCGGACATAGAAGCCTATTTAGTCACCAACTCGAGTCTTTTGTAAGCGGTCTTGCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR GCA 72 bp TCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATaGAGAATTCCAGCAGAACGTTTACCTCTAGCACAT +
Preference number: 3 (lower is better)
Translates to: SGQKASEGDRAG*RIPAERLPLAH
Trigger: ATGTGCTAGAGGTAAACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR CCA 72 bp ATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATaGCCTTGTGTCGAGTCATCTTACAAGTGTCCATCT +
Preference number: 3 (lower is better)
Translates to: IQTEESSGASRQ*PCVESSYKCPS
Trigger: AGATGGACACTTGTAAGATGACTCGACACAAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CAA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGACGAGAGAACATGCTaGTCTAACACTGCTTGGTTA +
Preference number: 3 (lower is better)
Translates to: AVDMKWCPCVKELVRESCDERTC*SNTAWL
Trigger: TAACCAAGCAGTGTTAGACAAGCATGTTCTCTCGTC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR TCA 72 bp TCCCTTATCCTTTTCGGGCCCTCCACCATACCAGACTaGAAAGTATTCCATTGTCCAGAAGTAGCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: SLILFGPSTIPD*KVFHCPEVAGL
Trigger: AAGACCAGCTACTTCTGGACAATGGAATACTTTTCAGTCTGGTATGGTGGAGGGCCCGAAAAGGATAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR GCA 72 bp TGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTaGCAGTTGGTTTCTATACTGATGCCAACAGCCAAT +
Preference number: 3 (lower is better)
Translates to: WCPCVKELVRES*QLVSILMPTAN
Trigger: ATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR CCA 72 bp TGTGGTGAAATCTTGAGGAGTTTGTGTTGCAATGCCTaGGACATGAACGGGCCATACAAACAGAGGAAAGCT +
Preference number: 3 (lower is better)
Translates to: CGEILRSLCCNA*DMNGPYKQRKA
Trigger: AGCTTTCCTCTGTTTGTATGGCCCGTTCATGTCCCAGGCATTGCAACACAAACTCCTCAAGATTTCACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR CCA 72 bp ACAGGTAACATGCCCAAGTACTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGTGTTGGAAAATCTACT +
Preference number: 3 (lower is better)
Translates to: TGNMPKYCTWNF*TSSVFGVGKST
Trigger: AGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGGCATGTTACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR-3UTR CAA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCGACGAGAGAACATGCTaGTCTAACACTGCTTGGTTA +
Preference number: 3 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCDERTC*SNTAWL
Trigger: TAACCAAGCAGTGTTAGACAAGCATGTTCTCTCGTC...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CAA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGACGAGAGAACATGCTaGTCTAACACTGCTTGGTTA +
Preference number: 3 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHDERTC*SNTAWL
Trigger: TAACCAAGCAGTGTTAGACAAGCATGTTCTCTCGTC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CAA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTCATGTGTCAAAGAGCTaGTCAGGGAAAGCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETHVSKS*SGKAAS
Trigger: ACTGGCAGCTTTCCCTGACAAGCTCTTTGACACATG...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR-3UTR CAA 90 bp TTCATGTTCACTGACAGCCAGTCCTCCTTGTTGGATGAGGTCATAAGATTTTCTTCCATTCCGACTGGTTaGTCTACAGGTAACATGCCC +
Preference number: 3 (lower is better)
Translates to: FMFTDSQSSLLDEVIRFSSIPTG*STGNMP
Trigger: GGGCATGTTACCTGTAGACAAACCAGTCGGAATGGA...AGAAAATCTTATGACCTCATCCAACAAGGAGGACTGGCTGTCAGTGAACATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR TCA 72 bp AGCTTGTCAGGGAAAGCTGCCAGTTGGTTTCTATACTaGTGCCAACAGCCAATTTTGTCAACCAACAGGTTC +
Preference number: 3 (lower is better)
Translates to: SLSGKAASWFLY*CQQPILSTNRF
Trigger: GAACCTGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR GCA 72 bp TTGTCATGTTGTGGTGAAATCTTGAGGAGTTTGTGTTaGAATGCCTGGGACATGAACGGGCCATACAAACAG +
Preference number: 3 (lower is better)
Translates to: LSCCGEILRSLC*NAWDMNGPYKQ
Trigger: CTGTTTGTATGGCCCGTTCATGTCCCAGGCATTGCAACACAAACTCCTCAAGATTTCACCACAACATGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR CCA 72 bp GGTAAATTCTCTGAAGACAAAGCATCAGCAACTGGATaGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTG +
Preference number: 3 (lower is better)
Translates to: GKFSEDKASATG*KVGWRSSFSLV
Trigger: CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR CCA 72 bp TTTTCCAACATCCCACAAACAGCTGTAGACATGAAATaGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: FSNIPQTAVDMK*CPCVKELVRES
Trigger: GCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATGTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CAA 90 bp TTCATGTTCACTGACAGCCAGTCCTCCTTGTTGGATGAGGTCATAAGATTTTCTGGACCAGCTCAGTCTTaGGTGTTGGAAAATCTACTT +
Preference number: 3 (lower is better)
Translates to: FMFTDSQSSLLDEVIRFSGPAQS*VLENLL
Trigger: AAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCC...AGAAAATCTTATGACCTCATCCAACAAGGAGGACTGGCTGTCAGTGAACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR TCA 72 bp AGGAAAACAGTCCTGGACTTAGATAGGGCACCATCATaGATACCACTGCGTAAGGAATTTGGACATCTTTCT +
Preference number: 3 (lower is better)
Translates to: RKTVLDLDRAPS*IPLRKEFGHLS
Trigger: AGAAAGATGTCCAAATTCCTTACGCAGTGGTATTCATGATGGTGCCCTATCTAAGTCCAGGACTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR GCA 72 bp CTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTaGTATGCAGTGCCTACTCCAATGTTGAAAACAGGG +
Preference number: 3 (lower is better)
Translates to: LAILFLQQFNGI*YAVPTPMLKTG
Trigger: CCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR-3UTR CAA 90 bp CATACTTTCATACATACTTTTTGGCCATGGCAGAAAGTGTCTGAACATACTCTTGACGAGAGAACATGCTaGTCTAACACTGCTTGGTTA +
Preference number: 3 (lower is better)
Translates to: HTFIHTFWPWQKVSEHTLDERTC*SNTAWL
Trigger: TAACCAAGCAGTGTTAGACAAGCATGTTCTCTCGTC...AAGAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR GCA 72 bp CATCCTATTTTTACAGCAATTCAATGGTATCTGCTATaGAGTGCCTACTCCAATGTTGAAAACAGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: HPIFTAIQWYLL*SAYSNVENRAK
Trigger: CTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR CCA 72 bp ACACAAACTCGCCATCCTATTTTTACAGCAATTCAATaGTATCTGCTATGCAGTGCCTACTCCAATGTTGAA +
Preference number: 3 (lower is better)
Translates to: TQTRHPIFTAIQ*YLLCSAYSNVE
Trigger: TTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
3UTR GCA 72 bp CTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATaGTGTTTTGGGAAACTTGTTAAACAGTCCATTACT +
Preference number: 3 (lower is better)
Translates to: LSFSPTYEGAGK*CFGKLVKQSIT
Trigger: AGTAATGGACTGTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
3UTR-3UTR CAA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATTGCCAACAGCCAATTTaGTCAACCAACAGGTTCAAT +
Preference number: 3 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHCQQPI*STNRFN
Trigger: ATTGAACCTGTTGGTTGACAAAATTGGCTGTTGGCA...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CAA 90 bp CATACTTTCATACATACTTTTTGGCCATGGCAGAAAGTGTCTGAACATACTCTTAACGAGAGTCTAAATTaGTATGTCTTTCCAGCTAAG +
Preference number: 3 (lower is better)
Translates to: HTFIHTFWPWQKVSEHTLNESLN*YVFPAK
Trigger: CTTAGCTGGAAAGACATACAAATTTAGACTCTCGTT...AAGAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
3UTR-3UTR CAA 90 bp CATACTTTCATACATACTTTTTGGCCATGGCAGAAAGTGTCTGAACATACTCTTGCTAGCTCAGAATTCTaGATCTTGAAAACAAGCAAA +
Preference number: 3 (lower is better)
Translates to: HTFIHTFWPWQKVSEHTLASSEF*ILKTSK
Trigger: TTTGCTTGTTTTCAAGATCAAGAATTCTGAGCTAGC...AAGAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTACGGGCTCCGGCAACTaGGCATGCTCAGTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLTGSGN*ACSVPF
Trigger: GAACGGCACTGAGCATGCTCAGTTGCCGGAGCCCGT...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295974.12
CDS-3UTR TCA 90 bp ATTAGGCTCGCACCAGAAAACGTGGCACTCAAAGCGCTGGTTCCCCGTGTCCATGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: IRLAPENVALKALVPRVHGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...ATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGAGCCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR GCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTCGACAAGCCCCAGGGTaGCGGCACCAGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSRQAPG*RHQPAV
Trigger: CACCGCTGGCTGGTGCCGGCACCCTGGGGCTTGTCG...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGTCCCAGCAGGGGCTGTaGAGCTGGATCCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQSQQGL*SWIREA
Trigger: GGCCTCTCGGATCCAGCTGCACAGCCCCTGCTGGGA...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTGGCACCAGCCAGCGGTaGCGTCGCTCAAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAGTSQR*RRSSSR
Trigger: GCGGCTGCTTGAGCGACGGCACCGCTGGCTGGTGCC...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGGCACCAGCCAGCGGTaGCGTCGCTCAAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLGTSQR*RRSSSR
Trigger: GCGGCTGCTTGAGCGACGGCACCGCTGGCTGGTGCC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGACGATGGGCTGCGAGTaGAGCACGCTGCGGTCCATG +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQTMGCE*STLRSM
Trigger: CATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGT...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTAACATGCAGGCGGCCTaGACCGCCTCAGACACGTTA +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLNMQAA*TASDTL
Trigger: TAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTT...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGGCACCAGCCAGCGGTaGCGTCGCTCAAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSGTSQR*RRSSSR
Trigger: GCGGCTGCTTGAGCGACGGCACCGCTGGCTGGTGCC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GTTCCCCGTGTCCATGATGAAGGCAAATGTGTGGACGTCCTTCCCAACACCCATGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VPRVHDEGKCVDVLPNTHDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...ATGGGTGTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTTCCCAGCAGGGGCTGTaGAGCTGGATCCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASSQQGL*SWIREA
Trigger: GGCCTCTCGGATCCAGCTGCACAGCCCCTGCTGGGA...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTTCCCAGCAGGGGCTGTaGAGCTGGATCCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVASQQGL*SWIREA
Trigger: GGCCTCTCGGATCCAGCTGCACAGCCCCTGCTGGGA...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCCTGGATCCGGTGCAGTaGACAGTCGGTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSLDPVQ*TVGFGP
Trigger: GGGGCCAAAACCGACTGTGCACTGCACCGGATCCAG...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR GCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTCTCCTCATCGCTCGGTaGCAGGTTCTGGATCCGGTG +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVLLIAR*QVLDPV
Trigger: CACCGGATCCAGAACCTGGCACCGAGCGATGAGGAG...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGCGAGTGCAGCACGCTaGGGTCCATGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSASAAR*GPWGPP
Trigger: TGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGC...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCGAGTGCAGCACGCTaGGGTCCATGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDASAAR*GPWGPP
Trigger: TGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGC...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGGCGAGTGCAGCACGCTaGGGTCCATGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRASAAR*GPWGPP
Trigger: TGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGC...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCGCGAGTGCAGCACGCTaGGGTCCATGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFASAAR*GPWGPP
Trigger: TGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGC...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTACGATGGGCTGCGAGTaGAGCACGCTGCGGTCCATG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVTMGCE*STLRSM
Trigger: CATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGT...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCACGATGGGCTGCGAGTaGAGCACGCTGCGGTCCATG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRITMGCE*STLRSM
Trigger: CATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGT...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp CAGAAAACGTGGCACTCAAAGCGCTGGTTCCCCGTGTCCATGATGAAGGCAAATAACATGCAGGCGGCCTaGACCGCCTCAGACACGTTA +
Preference number: 4 (lower is better)
Translates to: QKTWHSKRWFPVSMMKANNMQAA*TASDTL
Trigger: TAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTT...ATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR GCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAACGACAAGCCCCAGGGTaGCGGCACCAGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQRQAPG*RHQPAV
Trigger: CACCGCTGGCTGGTGCCGGCACCCTGGGGCTTGTCG...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502841.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGGATGCCGCCCCAGGTaGTACGACAAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASGCRPR*YDKPQG
Trigger: ACCCTGGGGCTTGTCGTAGCACCTGGGGCGGCATCC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCAGCAACTCCAACCAGTaGTGCGCGCGGCGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFSNSNQ*CARRSP
Trigger: AGGCGAGCGCCGCGCGCACCACTGGTTGGAGTTGCT...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTAGCAACTCCAACCAGTaGTGCGCGCGGCGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSSNSNQ*CARRSP
Trigger: AGGCGAGCGCCGCGCGCACCACTGGTTGGAGTTGCT...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACAGGGGCTGTGCAGCTaGATCCGAGAGGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGQGLCS*IREAHG
Trigger: GCCATGGGCCTCTCGGATCCAGCTGCACAGCCCCTG...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGCAGGGGCTGTGCAGCTaGATCCGAGAGGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVQGLCS*IREAHG
Trigger: GCCATGGGCCTCTCGGATCCAGCTGCACAGCCCCTG...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCGGAGATCTGCTGGGATaGAGACGGGCCGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSGDLLG*RRAVPT
Trigger: AGTGGGAACGGCCCGTCTCCATCCCAGCAGATCTCC...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp GTGTGGACGTCCTTCCCAACACCCATGAAGGACAGGAATCGCACACGACATTCCTCGCACCAGAAAACGTaGCACTCAAAGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VWTSFPTPMKDRNRTRHSSHQKT*HSKRWF
Trigger: GAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGA...GGAATGTCGTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGGACGTCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTAACGTGTCAGTGGGCTaGGTGCAGTGGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLNVSVG*VQWLTS
Trigger: AGATGTGAGCCACTGCACCCAGCCCACTGACACGTT...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTTCCGCAGTCCCATGGTaGTTGCCTCGGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVSAVPW*LPRFCS
Trigger: AGAGCAGAACCGAGGCAATCACCATGGGACTGCGGA...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGAATCGCCATTCCCAATaGTGGTGGAGGCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQNRHSQ*WWRPGP
Trigger: AGGGCCAGGCCTCCACCATCATTGGGAATGGCGATT...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTATCCGGGGAGCTGGGTaGGGCACTGTCTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVIRGAG*GTVLGQ
Trigger: TTGTCCCAAGACAGTGCCTCACCCAGCTCCCCGGAT...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCATCCGGGGAGCTGGGTaGGGCACTGTCTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCIRGAG*GTVLGQ
Trigger: TTGTCCCAAGACAGTGCCTCACCCAGCTCCCCGGAT...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGTCCCGGCAATGTCACTaGCTCTTTTCCAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQSRQCH*LFSSQA
Trigger: CGCCTGGCTGGAAAAGAGTCAGTGACATTGCCGGGA...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACACTGAGCATGCTCAGTaGCGTTCCGCGAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDTEHAQ*RSASPA
Trigger: CGCGGGACTCGCGGAACGGCACTGAGCATGCTCAGT...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000506352.5
CDS-3UTR GCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAGGGTCCTGCTGCCCTTaGTCTGCAGCCTTACGGAGC +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGGSCCP*SAALRS
Trigger: GCTCCGTAAGGCTGCAGAGCAAGGGCAGCAGGACCC...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGGGTCCTGCTGCCCTTaGTCTGCAGCCTTACGGAGC +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASGSCCP*SAALRS
Trigger: GCTCCGTAAGGCTGCAGAGCAAGGGCAGCAGGACCC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTCTGGATCCGGTGCAGTaGACAGTCGGTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSLDPVQ*TVGFGP
Trigger: GGGGCCAAAACCGACTGTGCACTGCACCGGATCCAG...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGATGGGCTGCGAGTaGAGCACGCTGCGGTCCATG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRTMGCE*STLRSM
Trigger: CATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGT...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGCTGACGATGGGCTaGGAGTGCAGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFMLTMG*ECSTLR
Trigger: CCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCAT...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTATGCTGACGATGGGCTaGGAGTGCAGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLMLTMG*ECSTLR
Trigger: CCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCAT...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAATGCTGACGATGGGCTaGGAGTGCAGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGMLTMG*ECSTLR
Trigger: CCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCAT...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGAACATGCAGGCGGCCTaGACCGCCTCAGACACGTTA +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQNMQAA*TASDTL
Trigger: TAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTT...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR GCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGGAAGTCGGGCGGGGATaGCGCCCCAGGTGCTACGAC +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLEVGRG*RPRCYD
Trigger: GTCGTAGCACCTGGGGCGGCATCCCCGCCCGACTTC...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR GCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAGAAGTCGGGCGGGGATaGCGCCCCAGGTGCTACGAC +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQEVGRG*RPRCYD
Trigger: GTCGTAGCACCTGGGGCGGCATCCCCGCCCGACTTC...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502841.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAAGCAACTCCAACCAGTaGTGCGCGCGGCGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALSNSNQ*CARRSP
Trigger: AGGCGAGCGCCGCGCGCACCACTGGTTGGAGTTGCT...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGGCCTGGCCCTGGACTaGCTGGGATTTCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHGLALD*LGFLFR
Trigger: GCGGAAGAGAAATCCCAGCCAGTCCAGGGCCAGGCC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAGGCCTGGCCCTGGACTaGCTGGGATTTCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGGLALD*LGFLFR
Trigger: GCGGAAGAGAAATCCCAGCCAGTCCAGGGCCAGGCC...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCCTCGGTGCCAGGTTCTaGATCCGGTGCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCLGARF*IRCSAQ
Trigger: CTGTGCACTGCACCGGATCCAGAACCTGGCACCGAG...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGGAGATCTGCTGGGATaGAGACGGGCCGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCGDLLG*RRAVPT
Trigger: AGTGGGAACGGCCCGTCTCCATCCCAGCAGATCTCC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTACCCTGGAGATCTGCTaGGATGGAGACGGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVTLEIC*DGDGPF
Trigger: GAACGGCCCGTCTCCATCCCAGCAGATCTCCAGGGT...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTCTGTTTCTCGTTCTCTaGGGTGGGAGATGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLLFLVL*GGRWRY
Trigger: GTAACGCCATCTCCCACCCCAGAGAACGAGAAACAG...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTTCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLSEKAA*LPSTSD
Trigger: ATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGA...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCCGCAGTCCCATGGTaGTTGCCTCGGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSSAVPW*LPRFCS
Trigger: AGAGCAGAACCGAGGCAATCACCATGGGACTGCGGA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATCCGGGGAGCTGGGTaGGGCACTGTCTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFIRGAG*GTVLGQ
Trigger: TTGTCCCAAGACAGTGCCTCACCCAGCTCCCCGGAT...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTTCCCGGCAATGTCACTaGCTCTTTTCCAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVSRQCH*LFSSQA
Trigger: CGCCTGGCTGGAAAAGAGTCAGTGACATTGCCGGGA...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCTCCCGGCAATGTCACTaGCTCTTTTCCAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRISRQCH*LFSSQA
Trigger: CGCCTGGCTGGAAAAGAGTCAGTGACATTGCCGGGA...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR GCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGTCCCAGCAGGGGCTGTaGAGCTGGATCCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLSQQGL*SWIREA
Trigger: GGCCTCTCGGATCCAGCTGCACAGCCCCTGCTGGGA...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTCTGCTGCCCTTGCTCTaGAGCCTTACGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSLLPLL*SLTELV
Trigger: AACCAGCTCCGTAAGGCTGCAGAGCAAGGGCAGCAG...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGGGTCCTGCTGCCCTTaGTCTGCAGCCTTACGGAGC +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSGSCCP*SAALRS
Trigger: GCTCCGTAAGGCTGCAGAGCAAGGGCAGCAGGACCC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGGGTCCTGCTGCCCTTaGTCTGCAGCCTTACGGAGC +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALGSCCP*SAALRS
Trigger: GCTCCGTAAGGCTGCAGAGCAAGGGCAGCAGGACCC...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCTTTTTGTTGGGGTCCTaGTGCCCTTGCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSFLLGS*CPCSAA
Trigger: GGCTGCAGAGCAAGGGCAGCAGGACCCCAACAAAAA...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATCTGGATCCGGTGCAGTaGACAGTCGGTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHLDPVQ*TVGFGP
Trigger: GGGGCCAAAACCGACTGTGCACTGCACCGGATCCAG...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTCTGGATCCGGTGCAGTaGACAGTCGGTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVALDPVQ*TVGFGP
Trigger: GGGGCCAAAACCGACTGTGCACTGCACCGGATCCAG...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCTGGATCCGGTGCAGTaGACAGTCGGTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLLDPVQ*TVGFGP
Trigger: GGGGCCAAAACCGACTGTGCACTGCACCGGATCCAG...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGCTCCTCATCGCTCGGTaGCAGGTTCTGGATCCGGTG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRLLIAR*QVLDPV
Trigger: CACCGGATCCAGAACCTGGCACCGAGCGATGAGGAG...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGAACCCTGGAGATCTaGTGGGATGGAGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFRTLEI*WDGDGP
Trigger: CGGCCCGTCTCCATCCCAGCAGATCTCCAGGGTTCT...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACGCGAGTGCAGCACGCTaGGGTCCATGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYASAAR*GPWGPP
Trigger: TGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGC...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTAACATGCAGGCGGCCTaGACCGCCTCAGACACGTTA +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSNMQAA*TASDTL
Trigger: TAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTT...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCAACATGCAGGCGGCCTaGACCGCCTCAGACACGTTA +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCNMQAA*TASDTL
Trigger: TAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTT...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTCCAATATTGCCCCACTaGACTCCAGCCTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVPILPH*TPAWEA
Trigger: TGCTTCCCAGGCTGGAGTGCAGTGGGGCAATATTGG...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGGGATGCCGCCCCAGGTaGTACGACAAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLGCRPR*YDKPQG
Trigger: ACCCTGGGGCTTGTCGTAGCACCTGGGGCGGCATCC...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR GCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAGGATGCCGCCCCAGGTaGTACGACAAGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQGCRPR*YDKPQG
Trigger: ACCCTGGGGCTTGTCGTAGCACCTGGGGCGGCATCC...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502841.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCGTTAAGGGTGTTTGGTaGTGTGGCTGGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSVKGVW*CGWAVP
Trigger: CGGAACAGCCCAGCCACACCACCAAACACCCTTAAC...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCCAGGGGCTGTGCAGCTaGATCCGAGAGGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVQGLCS*IREAHG
Trigger: GCCATGGGCCTCTCGGATCCAGCTGCACAGCCCCTG...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAACAGGGGCTGTGCAGCTaGATCCGAGAGGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQQGLCS*IREAHG
Trigger: GCCATGGGCCTCTCGGATCCAGCTGCACAGCCCCTG...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTGCTCGAGGAATCCTGTaGGTGGGGCTCTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSARGIL*VGLFTL
Trigger: GAGGGTAAAGAGCCCCACCCACAGGATTCCTCGAGC...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTAGCTCGAGGAATCCTGTaGGTGGGGCTCTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLARGIL*VGLFTL
Trigger: GAGGGTAAAGAGCCCCACCCACAGGATTCCTCGAGC...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACCTCGGTGCCAGGTTCTaGATCCGGTGCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDLGARF*IRCSAQ
Trigger: CTGTGCACTGCACCGGATCCAGAACCTGGCACCGAG...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTCTCGGTGCCAGGTTCTaGATCCGGTGCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSLGARF*IRCSAQ
Trigger: CTGTGCACTGCACCGGATCCAGAACCTGGCACCGAG...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTTTTCATCCGGGGAGCTaGGTGAGGCACTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVFHPGS*VRHCLG
Trigger: CCCAAGACAGTGCCTCACCCAGCTCCCCGGATGAAA...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGGAGATCTGCTGGGATaGAGACGGGCCGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASGDLLG*RRAVPT
Trigger: AGTGGGAACGGCCCGTCTCCATCCCAGCAGATCTCC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGGAGATCTGCTGGGATaGAGACGGGCCGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLGDLLG*RRAVPT
Trigger: AGTGGGAACGGCCCGTCTCCATCCCAGCAGATCTCC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATACCCTGGAGATCTGCTaGGATGGAGACGGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHTLEIC*DGDGPF
Trigger: GAACGGCCCGTCTCCATCCCAGCAGATCTCCAGGGT...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTTTGGAGCAGATCTCGTaGAGACTTGTGGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLLEQIS*RLVAMA
Trigger: AGCCATTGCCACAAGTCTCCACGAGATCTGCTCCAA...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GAAGGCAAATGTGTGGACGTCCTTCCCAACACCCATGAAGGACAGGAATCGCACTTGGAGCAGATCTCGTaGAGACTTGTGGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: EGKCVDVLPNTHEGQESHLEQIS*RLVAMA
Trigger: AGCCATTGCCACAAGTCTCCACGAGATCTGCTCCAA...GTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGGACGTCCACACATTTGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSCRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GCCTGGCTACCAAGCACTTCTGATATCGTAACATGCAGGCGGCCTGCACCGCCTGACCAGCTCAGTCTTTaGTGTTGGAAAATCTACTTG +
Preference number: 4 (lower is better)
Translates to: AWLPSTSDIVTCRRPAPPDQLSL*CWKIYL
Trigger: CAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTC...AGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTTGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCCATTCCGACTGGTTTGTCTACAGGTAACATGCCCAAGTACTGCACGTGGAACTGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SIPTGLSTGNMPKYCTWNCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...GTTCCACGTGCAGTACTTGGGCATGTTACCTGTAGACAAACCAGTCGGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGTAATCTCAGCAGTTTaGGAGGCTGAGGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQVISAV*EAEVGT
Trigger: CGTGCCCACCTCAGCCTCCCAAACTGCTGAGATTAC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTCGCAGGGAGCGGCGCTaGCGAGATTCCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETRRERR*RDSTSP
Trigger: TGGAGAAGTGGAATCTCGTCAGCGCCGCTCCCTGCG...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295974.12
CDS-3UTR TCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCCGCAGGGAGCGGCGCTaGCGAGATTCCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVRRERR*RDSTSP
Trigger: TGGAGAAGTGGAATCTCGTCAGCGCCGCTCCCTGCG...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000506352.5
CDS-3UTR TCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGACGGGCTCCGGCAACTaGGCATGCTCAGTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLTGSGN*ACSVPF
Trigger: GAACGGCACTGAGCATGCTCAGTTGCCGGAGCCCGT...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000506352.5
CDS-3UTR TCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTAGCTGGAAGTACTTCTaGCATGGATCACCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVSWKYF*HGSPGV
Trigger: GACGCCTGGTGATCCATGTCAGAAGTACTTCCAGCT...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCTCCGCAGTCCCATGGTaGTTGCCTCGGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFSAVPW*LPRFCS
Trigger: AGAGCAGAACCGAGGCAATCACCATGGGACTGCGGA...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGTCCGCAGTCCCATGGTaGTTGCCTCGGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRSAVPW*LPRFCS
Trigger: AGAGCAGAACCGAGGCAATCACCATGGGACTGCGGA...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGAATCGCCATTCCCAATaGTGGTGGAGGCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRNRHSQ*WWRPGP
Trigger: AGGGCCAGGCCTCCACCATCATTGGGAATGGCGATT...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACAATCGCCATTCCCAATaGTGGTGGAGGCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHNRHSQ*WWRPGP
Trigger: AGGGCCAGGCCTCCACCATCATTGGGAATGGCGATT...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTAATCGCCATTCCCAATaGTGGTGGAGGCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASNRHSQ*WWRPGP
Trigger: AGGGCCAGGCCTCCACCATCATTGGGAATGGCGATT...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGGTTTCTGGGCTGGATaGCACTGTGGCTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFGFWAG*HCGYLA
Trigger: GGCCAAGTAGCCACAGTGTCATCCAGCCCAGAAACC...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGGGTTTCTGGGCTGGATaGCACTGTGGCTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVGFWAG*HCGYLA
Trigger: GGCCAAGTAGCCACAGTGTCATCCAGCCCAGAAACC...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACTCCCGGCAATGTCACTaGCTCTTTTCCAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHSRQCH*LFSSQA
Trigger: CGCCTGGCTGGAAAAGAGTCAGTGACATTGCCGGGA...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTGGGGTCCACCAGGCTaGGCATGTCATTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCWGPPG*ACHSPG
Trigger: TCCTGGAGAATGACATGCTCAGCCTGGTGGACCCCA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTGGGGTCCACCAGGCTaGGCATGTCATTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVWGPPG*ACHSPG
Trigger: TCCTGGAGAATGACATGCTCAGCCTGGTGGACCCCA...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCCTTCCCAACACCCATaGAGGACAGGAATCGCACAC +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVPSQHP*RTGIAH
Trigger: GTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGG...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTATGGAAAGGCTCTTCCTaGCGGATATGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLWKGSS*RIWRQH
Trigger: GTGCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCA...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGACTGAGCATGCTCAGTaGCGTTCCGCGAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLTEHAQ*RSASPA
Trigger: CGCGGGACTCGCGGAACGGCACTGAGCATGCTCAGT...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000506352.5
CDS-3UTR GCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCTGCTGCCCTTGCTCTaGAGCCTTACGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLLLPLL*SLTELV
Trigger: AACCAGCTCCGTAAGGCTGCAGAGCAAGGGCAGCAG...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCTGCTGCCCTTGCTCTaGAGCCTTACGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASLLPLL*SLTELV
Trigger: AACCAGCTCCGTAAGGCTGCAGAGCAAGGGCAGCAG...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCCTGCTGCCCTTGCTCTaGAGCCTTACGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCLLPLL*SLTELV
Trigger: AACCAGCTCCGTAAGGCTGCAGAGCAAGGGCAGCAG...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAGGGTCCTGCTGCCCTTaGTCTGCAGCCTTACGGAGC +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQGSCCP*SAALRS
Trigger: GCTCCGTAAGGCTGCAGAGCAAGGGCAGCAGGACCC...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCTTTTTGTTGGGGTCCTaGTGCCCTTGCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIFLLGS*CPCSAA
Trigger: GGCTGCAGAGCAAGGGCAGCAGGACCCCAACAAAAA...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCACGATGGGCTGCGAGTaGAGCACGCTGCGGTCCATG +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVTMGCE*STLRSM
Trigger: CATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGT...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAATGCTGACGATGGGCTaGGAGTGCAGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQMLTMG*ECSTLR
Trigger: CCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCAT...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAACATGCAGGCGGCCTaGACCGCCTCAGACACGTTA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFNMQAA*TASDTL
Trigger: TAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTT...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCAACATGCAGGCGGCCTaGACCGCCTCAGACACGTTA +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCNMQAA*TASDTL
Trigger: TAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTT...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp CATACTTTCATACATACTTTTTGGCCATGGCAGAAAGTGTCTGAACATACTCTTCGACAAGCCCCAGGGTaGCGGCACCAGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: HTFIHTFWPWQKVSEHTLRQAPG*RHQPAV
Trigger: CACCGCTGGCTGGTGCCGGCACCCTGGGGCTTGTCG...AAGAGTATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543538.5
CDS-3UTR GCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGAAGTCGGGCGGGGATaGCGCCCCAGGTGCTACGAC +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTEVGRG*RPRCYD
Trigger: GTCGTAGCACCTGGGGCGGCATCCCCGCCCGACTTC...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502841.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCGACAGTCAACACATTaGCAGAGGCCTCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVRQSTH*QRPRQF
Trigger: GAACTGCCGAGGCCTCTGCCAATGTGTTGACTGTCG...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTGTTAAGGGTGTTTGGTaGTGTGGCTGGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSVKGVW*CGWAVP
Trigger: CGGAACAGCCCAGCCACACCACCAAACACCCTTAAC...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGTTAAGGGTGTTTGGTaGTGTGGCTGGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCVKGVW*CGWAVP
Trigger: CGGAACAGCCCAGCCACACCACCAAACACCCTTAAC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGCAGCCTTACGGAGCTaGTTCTCCCCATTTTTCACC +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQAALRS*FSPFFT
Trigger: GGTGAAAAATGGGGAGAACCAGCTCCGTAAGGCTGC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTGGCTCAGGTTTTTGTTaGGGTCCTGCTGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVGSGFC*GPAALA
Trigger: AGCAAGGGCAGCAGGACCCCAACAAAAACCTGAGCC...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGAGGAATCCTGTGGGTaGGGCTCTTTACCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQEESCG*GSLPSN
Trigger: GTTAGAGGGTAAAGAGCCCCACCCACAGGATTCCTC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTGCTCGAGGAATCCTGTaGGTGGGGCTCTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAARGIL*VGLFTL
Trigger: GAGGGTAAAGAGCCCCACCCACAGGATTCCTCGAGC...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTTGGCCCTGGACTGGCTaGGATTTCTCTTCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSWPWTG*DFSSAV
Trigger: GACTGCGGAAGAGAAATCCCAGCCAGTCCAGGGCCA...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACTGGCCCTGGACTGGCTaGGATTTCTCTTCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHWPWTG*DFSSAV
Trigger: GACTGCGGAAGAGAAATCCCAGCCAGTCCAGGGCCA...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTGGCCCTGGACTGGCTaGGATTTCTCTTCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHWPWTG*DFSSAV
Trigger: GACTGCGGAAGAGAAATCCCAGCCAGTCCAGGGCCA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGACACTGTGGCTACTTaGCCGTCTTCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSDTVAT*PSSGLD
Trigger: GTCCAGCCCTGAAGACGGCCAAGTAGCCACAGTGTC...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGGACACTGTGGCTACTTaGCCGTCTTCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVDTVAT*PSSGLD
Trigger: GTCCAGCCCTGAAGACGGCCAAGTAGCCACAGTGTC...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACGACACTGTGGCTACTTaGCCGTCTTCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHDTVAT*PSSGLD
Trigger: GTCCAGCCCTGAAGACGGCCAAGTAGCCACAGTGTC...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTGGCTGGATGACACTGTaGCTACTTGGCCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVGWMTL*LLGRLQ
Trigger: CTGAAGACGGCCAAGTAGCCACAGTGTCATCCAGCC...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGGCTGGATGACACTGTaGCTACTTGGCCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIGWMTL*LLGRLQ
Trigger: CTGAAGACGGCCAAGTAGCCACAGTGTCATCCAGCC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTAACAACGTTGTCCAGCTaGACTCCTCATCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLTTLSS*TPHRSV
Trigger: CACCGAGCGATGAGGAGTCCAGCTGGACAACGTTGT...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTACAACGTTGTCCAGCTaGACTCCTCATCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSTTLSS*TPHRSV
Trigger: CACCGAGCGATGAGGAGTCCAGCTGGACAACGTTGT...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGGTGAGGCACTGTCTTaGGACAACGTTGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCGEALS*DNVVQL
Trigger: CAGCTGGACAACGTTGTCCCAAGACAGTGCCTCACC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACTTTCATCCGGGGAGCTaGGTGAGGCACTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDFHPGS*VRHCLG
Trigger: CCCAAGACAGTGCCTCACCCAGCTCCCCGGATGAAA...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACTTTCATCCGGGGAGCTaGGTGAGGCACTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHFHPGS*VRHCLG
Trigger: CCCAAGACAGTGCCTCACCCAGCTCCCCGGATGAAA...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVCRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRICRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTTTCACTGATGACAGTCACAGTGGCATCAGCCACGTTCATGTTCACTGACAGCTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FSLMTVTVASATFMFTDSCRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...GCTGTCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp CCGACTGGTTTGTCTACAGGTAACATGCCCAAGTACTGCACGTGGAACTTCTGGCATCGAGGTTCACATTaGCCCTTTCCTGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PTGLSTGNMPKYCTWNFWHRGSH*PFPVRS
Trigger: GCTCCTTACAGGAAAGGGCCAATGTGAACCTCGATG...CCAGAAGTTCCACGTGCAGTACTTGGGCATGTTACCTGTAGACAAACCAGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTATGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGACCAGCTCAGTCTTTGGTGTTGGAAAATCTACTTGCAAAGGGACATCGAGGTGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: WTSSVFGVGKSTCKGTSRWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...CCTCGATGTCCCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTATGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTGCATCAGCAACTGGATaGAAGGTCGGATGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVASATG*KVGWRS
Trigger: ACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGC...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCAACGTGTCAGTGGGCTaGGTGCAGTGGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRINVSVG*VQWLTS
Trigger: AGATGTGAGCCACTGCACCCAGCCCACTGACACGTT...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTCCTCGTTCTCTGGGGTaGGAGATGGCGTTACAGAAC +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSPRSLG*EMALQN
Trigger: GTTCTGTAACGCCATCTCCCACCCCAGAGAACGAGG...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCTGCCTGGACAACAGTaGGCCCATAGCGACAGTCAA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFLPGQQ*AHSDSQ
Trigger: TTGACTGTCGCTATGGGCTCACTGTTGTCCAGGCAG...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAAGGTGTCAACACCTaGGTCAGCTGGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQQGVNT*VSWKYF
Trigger: GAAGTACTTCCAGCTGACTCAGGTGTTGACACCTTG...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGGTTTCTGGGCTGGATaGCACTGTGGCTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSGFWAG*HCGYLA
Trigger: GGCCAAGTAGCCACAGTGTCATCCAGCCCAGAAACC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAATCCGGGGAGCTGGGTaGGGCACTGTCTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQIRGAG*GTVLGQ
Trigger: TTGTCCCAAGACAGTGCCTCACCCAGCTCCCCGGAT...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCACGTTCATGTTCACTaGCAGCCAGTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQHVHVH*QPVLLV
Trigger: AACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTCCTTCCCAACACCCATaGAGGACAGGAATCGCACAC +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSPSQHP*RTGIAH
Trigger: GTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGG...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCCTTCCCAACACCCATaGAGGACAGGAATCGCACAC +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLPSQHP*RTGIAH
Trigger: GTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGG...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCCTTCCCAACACCCATaGAGGACAGGAATCGCACAC +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFPSQHP*RTGIAH
Trigger: GTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGG...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCCTTCCCAACACCCATaGAGGACAGGAATCGCACAC +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASPSQHP*RTGIAH
Trigger: GTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGG...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CTGATGACAGTCACAGTGGCATCAGCCACGTTCATGTTCACTGACAGCCAGTCCGTTTCAAAGTGTCAATaGGGGATAAGACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: LMTVTVASATFMFTDSQSVSKCQ*GIRPLV
Trigger: AACGAGGGGTCTTATCCCTCATTGACACTTTGAAAC...GGACTGGCTGTCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR TCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTGGAAAGGCTCTTCCTaGCGGATATGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHWKGSS*RIWRQH
Trigger: GTGCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCCAAGGAGCAGATGTATaGGGTGGCAAGTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSQGADV*GGKSVS
Trigger: AGACACAGACTTGCCACCTCATACATCTGCTCCTTG...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGAGGTGGAGGTTGTGGTaGGCTGAAATTACACCACTG +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQRWRLW*AEITPL
Trigger: CAGTGGTGTAATTTCAGCTCACCACAACCTCCACCT...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTGAGGCGAGAATTGCTTaGACTTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSEARIA*TWEVEV
Trigger: AACCTCCACCTCCCAAGTTCAAGCAATTCTCGCCTC...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTAGCTACTCAGGAGGCTaGGGCGAGAATTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVSYSGG*GENCLN
Trigger: GTTCAAGCAATTCTCGCCTCAGCCTCCTGAGTAGCT...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCAGGTGCAGGTTGCAGTaGGCCAATATTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCRCRLQ*ANIAPL
Trigger: CAGTGGGGCAATATTGGCTCACTGCAACCTGCACCT...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGAGGTGCAGGTTGCAGTaGGCCAATATTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRRCRLQ*ANIAPL
Trigger: CAGTGGGGCAATATTGGCTCACTGCAACCTGCACCT...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCAGCGCCCAGATCAGATaGGGTTACAGCGCACTAGCT +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCSAQIR*GYSALA
Trigger: AGCTAGTGCGCTGTAACCGCATCTGATCTGGGCGCT...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
CDS-3UTR GCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAAGCGCCCAGATCAGATaGGGTTACAGCGCACTAGCT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGSAQIR*GYSALA
Trigger: AGCTAGTGCGCTGTAACCGCATCTGATCTGGGCGCT...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
CDS-3UTR GCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGGATCCGACCACAGCATaGTTGGCTACAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRDPTTA*LATDHS
Trigger: GCTGTGGTCTGTAGCCAAGCATGCTGTGGTCGGATC...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACATCCCAGCAGGGGCTGTaGAGCTGGATCCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTSQQGL*SWIREA
Trigger: GGCCTCTCGGATCCAGCTGCACAGCCCCTGCTGGGA...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTCTGCTGCCCTTGCTCTaGAGCCTTACGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSLLPLL*SLTELV
Trigger: AACCAGCTCCGTAAGGCTGCAGAGCAAGGGCAGCAG...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACTTGTTGGGGTCCTGCTaGCCTTGCTCTGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHLLGSC*PCSAAL
Trigger: TAAGGCTGCAGAGCAAGGGCAGCAGGACCCCAACAA...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTTGTTGGGGTCCTGCTaGCCTTGCTCTGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFLLGSC*PCSAAL
Trigger: TAAGGCTGCAGAGCAAGGGCAGCAGGACCCCAACAA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGATTGTTGGGGTCCTGCTaGCCTTGCTCTGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGLLGSC*PCSAAL
Trigger: TAAGGCTGCAGAGCAAGGGCAGCAGGACCCCAACAA...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTTGTTGGGGTCCTGCTaGCCTTGCTCTGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHLLGSC*PCSAAL
Trigger: TAAGGCTGCAGAGCAAGGGCAGCAGGACCCCAACAA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTTTTTGTTGGGGTCCTaGTGCCCTTGCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFFLLGS*CPCSAA
Trigger: GGCTGCAGAGCAAGGGCAGCAGGACCCCAACAAAAA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
50% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTTTTTTGTTGGGGTCCTaGTGCCCTTGCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASFLLGS*CPCSAA
Trigger: GGCTGCAGAGCAAGGGCAGCAGGACCCCAACAAAAA...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACCTCCTCATCGCTCGGTaGCAGGTTCTGGATCCGGTG +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYLLIAR*QVLDPV
Trigger: CACCGGATCCAGAACCTGGCACCGAGCGATGAGGAG...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCAGAACCCTGGAGATCTaGTGGGATGGAGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVRTLEI*WDGDGP
Trigger: CGGCCCGTCTCCATCCCAGCAGATCTCCAGGGTTCT...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCGGGGATAGAGCTGGATaGAGAATTCCAGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSGDRAG*RIPAER
Trigger: ACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCC...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGCAGTGAGCCAATATTaGCCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHAVSQY*PTALQP
Trigger: AGGCTGGAGTGCAGTGGGGCAATATTGGCTCACTGC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCGCAGTGAGCCAATATTaGCCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCAVSQY*PTALQP
Trigger: AGGCTGGAGTGCAGTGGGGCAATATTGGCTCACTGC...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACCCAGGAGGTGCAGGTTaGAGTGAGCCAATATTGCCC +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDPGGAG*SEPILP
Trigger: GGGCAATATTGGCTCACTGCAACCTGCACCTCCTGG...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACCCAGGAGGTGCAGGTTaGAGTGAGCCAATATTGCCC +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHPGGAG*SEPILP
Trigger: GGGCAATATTGGCTCACTGCAACCTGCACCTCCTGG...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCAACTTCCTCACCTTTaGCTCCCGGTCCTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLQLPHL*LPVLPK
Trigger: CTTCGGAAGGACCGGGAGGCAAAGGTGAGGAAGTTG...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAACTTCCTCACCTTTaGCTCCCGGTCCTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASQLPHL*LPVLPK
Trigger: CTTCGGAAGGACCGGGAGGCAAAGGTGAGGAAGTTG...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTTCTGTTCCACGGCTaGGCAGATCCGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLFLFHG*ADPTTA
Trigger: TGCTGTGGTCGGATCTGCCCAGCCGTGGAACAGAAA...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATCGACAGTCAACACATTaGCAGAGGCCTCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHRQSTH*QRPRQF
Trigger: GAACTGCCGAGGCCTCTGCCAATGTGTTGACTGTCG...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGGGGTGTTTGGTGGTGTaGCTGGGCTGTTCCGATTTG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRGCLVV*LGCSDL
Trigger: CAAATCGGAACAGCCCAGCCACACCACCAAACACCC...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGGGTGTTTGGTGGTGTaGCTGGGCTGTTCCGATTTG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHGCLVV*LGCSDL
Trigger: CAAATCGGAACAGCCCAGCCACACCACCAAACACCC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCGTTAAGGGTGTTTGGTaGTGTGGCTGGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFVKGVW*CGWAVP
Trigger: CGGAACAGCCCAGCCACACCACCAAACACCCTTAAC...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTAGAGGTTAAGGGTGTTTaGTGGTGTGGCTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLEVKGV*WCGWAV
Trigger: AACAGCCCAGCCACACCACCAAACACCCTTAACCTC...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTCAGGGGCTGTGCAGCTaGATCCGAGAGGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCQGLCS*IREAHG
Trigger: GCCATGGGCCTCTCGGATCCAGCTGCACAGCCCCTG...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGCAGCCTTACGGAGCTaGTTCTCCCCATTTTTCACC +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCAALRS*FSPFFT
Trigger: GGTGAAAAATGGGGAGAACCAGCTCCGTAAGGCTGC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTGCAGCCTTACGGAGCTaGTTCTCCCCATTTTTCACC +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSAALRS*FSPFFT
Trigger: GGTGAAAAATGGGGAGAACCAGCTCCGTAAGGCTGC...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGCAGCCTTACGGAGCTaGTTCTCCCCATTTTTCACC +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIAALRS*FSPFFT
Trigger: GGTGAAAAATGGGGAGAACCAGCTCCGTAAGGCTGC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCGGCTCAGGTTTTTGTTaGGGTCCTGCTGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFGSGFC*GPAALA
Trigger: AGCAAGGGCAGCAGGACCCCAACAAAAACCTGAGCC...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGAGGAATCCTGTGGGTaGGGCTCTTTACCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCEESCG*GSLPSN
Trigger: GTTAGAGGGTAAAGAGCCCCACCCACAGGATTCCTC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGAGGAATCCTGTGGGTaGGGCTCTTTACCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIEESCG*GSLPSN
Trigger: GTTAGAGGGTAAAGAGCCCCACCCACAGGATTCCTC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGCTCGAGGAATCCTGTaGGTGGGGCTCTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALARGIL*VGLFTL
Trigger: GAGGGTAAAGAGCCCCACCCACAGGATTCCTCGAGC...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTCTCGGTGCCAGGTTCTaGATCCGGTGCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETLGARF*IRCSAQ
Trigger: CTGTGCACTGCACCGGATCCAGAACCTGGCACCGAG...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAACTCGGTGCCAGGTTCTaGATCCGGTGCAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQLGARF*IRCSAQ
Trigger: CTGTGCACTGCACCGGATCCAGAACCTGGCACCGAG...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTACAACGTTGTCCAGCTaGACTCCTCATCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVATTLSS*TPHRSV
Trigger: CACCGAGCGATGAGGAGTCCAGCTGGACAACGTTGT...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCACAACGTTGTCCAGCTaGACTCCTCATCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFTTLSS*TPHRSV
Trigger: CACCGAGCGATGAGGAGTCCAGCTGGACAACGTTGT...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCGGTGAGGCACTGTCTTaGGACAACGTTGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCGEALS*DNVVQL
Trigger: CAGCTGGACAACGTTGTCCCAAGACAGTGCCTCACC...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGGTGAGGCACTGTCTTaGGACAACGTTGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLGEALS*DNVVQL
Trigger: CAGCTGGACAACGTTGTCCCAAGACAGTGCCTCACC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCACCCTGGAGATCTGCTaGGATGGAGACGGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVTLEIC*DGDGPF
Trigger: GAACGGCCCGTCTCCATCCCAGCAGATCTCCAGGGT...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTACCCTGGAGATCTGCTaGGATGGAGACGGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETTLEIC*DGDGPF
Trigger: GAACGGCCCGTCTCCATCCCAGCAGATCTCCAGGGT...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCTCTCGTTCTCTGGGGTaGGAGATGGCGTTACAGAAC +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRISRSLG*EMALQN
Trigger: GTTCTGTAACGCCATCTCCCACCCCAGAGAACGAGA...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCCRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFCRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTTGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTTGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCTCGCACCAGAAAACGTaGCACTCAAAGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCSHQKT*HSKRWF
Trigger: GAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGA...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTTTCACTGATGACAGTCACAGTGGCATCAGCCACGTTCATGTTCACTGACAGCTCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FSLMTVTVASATFMFTDSSEKAA*LPSTSD
Trigger: ATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGA...GCTGTCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSSEKAA*LPSTSD
Trigger: ATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTTGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTTGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGTGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCATCAGCAACTGGATaGAAGGTCGGATGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDASATG*KVGWRS
Trigger: ACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGC...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGCATCAGCAACTGGATaGAAGGTCGGATGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASASATG*KVGWRS
Trigger: ACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAGCATCAGCAACTGGATaGAAGGTCGGATGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGASATG*KVGWRS
Trigger: ACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGC...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGCATCAGCAACTGGATaGAAGGTCGGATGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLASATG*KVGWRS
Trigger: ACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGGGGCTTCCAGGCAATaGCCTTGTGTCGAGTCATCT +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDGASRQ*PCVESS
Trigger: AGATGACTCGACACAAGGCCATTGCCTGGAAGCCCC...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTAACAGAGGAAAGCTCTaGGGCTTCCAGGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSNRGKL*GFQAMA
Trigger: GGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTT...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCTTGTGTTGCAATGCCTaGGACATGAACGGGCCATAC +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSLCCNA*DMNGPY
Trigger: GTATGGCCCGTTCATGTCCCAGGCATTGCAACACAA...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACGTAATCTCAGCAGTTTaGGAGGCTGAGGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHVISAV*EAEVGT
Trigger: CGTGCCCACCTCAGCCTCCCAAACTGCTGAGATTAC...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTAACGTGTCAGTGGGCTaGGTGCAGTGGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASNVSVG*VQWLTS
Trigger: AGATGTGAGCCACTGCACCCAGCCCACTGACACGTT...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTCAAATCCTCGTTCTCTaGGGTGGGAGATGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSQILVL*GGRWRY
Trigger: GTAACGCCATCTCCCACCCCAGAGAACGAGGATTTG...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACAGCTGGAAGTACTTCTaGCATGGATCACCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHSWKYF*HGSPGV
Trigger: GACGCCTGGTGATCCATGTCAGAAGTACTTCCAGCT...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCAAGGTGTCAACACCTaGGTCAGCTGGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVQGVNT*VSWKYF
Trigger: GAAGTACTTCCAGCTGACTCAGGTGTTGACACCTTG...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCCGTTACAGAACTAAGTaGCCCTTTCCTAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSRYRTK*PFPRTL
Trigger: CAGGGTTCTAGGAAAGGGTCACTTAGTTCTGTAACG...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR TCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGGGGTCCACCAGGCTaGGCATGTCATTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETWGPPG*ACHSPG
Trigger: TCCTGGAGAATGACATGCTCAGCCTGGTGGACCCCA...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGTGGGGTCCACCAGGCTaGGCATGTCATTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLWGPPG*ACHSPG
Trigger: TCCTGGAGAATGACATGCTCAGCCTGGTGGACCCCA...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCCACGTTCATGTTCACTaGCAGCCAGTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCHVHVH*QPVLLV
Trigger: AACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTGCTATGGCATTTCGGTaGCAGGGCGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSAMAFR*QGVSVS
Trigger: TGAAACAGAAACGCCCTGTCACCGAAATGCCATAGC...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGCTATGGCATTTCGGTaGCAGGGCGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCAMAFR*QGVSVS
Trigger: TGAAACAGAAACGCCCTGTCACCGAAATGCCATAGC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTTCTTTTCATATCACATaGTGGTGGCAAGACGAGAGA +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLSFHIT*WWQDER
Trigger: TCTCTCGTCTTGCCACCATCATGTGATATGAAAAGA...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGCCATGGACAATACATaGTGGACAGACAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQAMDNT*WTDSFL
Trigger: CAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCCACTCATTCCATCATaGTCTCTGGTGGCTAAGTAC +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQPLIPS*SLVAKY
Trigger: GTACTTAGCCACCAGAGATCATGATGGAATGAGTGG...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTCTACAGCGACCGAGATaGAAGATCACTGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLLQRPR*KITVND
Trigger: ATCATTTACAGTGATCTTTCATCTCGGTCGCTGTAG...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGCTAGTCGTTCCCCTTaGTGTTGCCAAGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSASRSP*CCQGAD
Trigger: ATCTGCTCCTTGGCAACATCAAGGGGAACGACTAGC...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGGCTAGTCGTTCCCCTTaGTGTTGCCAAGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVASRSP*CCQGAD
Trigger: ATCTGCTCCTTGGCAACATCAAGGGGAACGACTAGC...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTGCTAGTCGTTCCCCTTaGTGTTGCCAAGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAASRSP*CCQGAD
Trigger: ATCTGCTCCTTGGCAACATCAAGGGGAACGACTAGC...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTGTTGTGGTGAAATCTTaGGGAGTTTGTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLVVVKS*GVCVAM
Trigger: CATTGCAACACAAACTCCTCAAGATTTCACCACAAC...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGAGGTTGTGGTGAGCTaGAATTACACCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIEVVVS*NYTTAL
Trigger: GAGTGCAGTGGTGTAATTTCAGCTCACCACAACCTC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAGAGGCGAGAATTGCTTaGACTTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGEARIA*TWEVEV
Trigger: AACCTCCACCTCCCAAGTTCAAGCAATTCTCGCCTC...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCGAGGCGAGAATTGCTTaGACTTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCEARIA*TWEVEV
Trigger: AACCTCCACCTCCCAAGTTCAAGCAATTCTCGCCTC...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAAGCGCCCAGATCAGATaGGGTTACAGCGCACTAGCT +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALSAQIR*GYSALA
Trigger: AGCTAGTGCGCTGTAACCGCATCTGATCTGGGCGCT...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
CDS-3UTR GCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGATCCGACCACAGCATaGTTGGCTACAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALDPTTA*LATDHS
Trigger: GCTGTGGTCTGTAGCCAAGCATGCTGTGGTCGGATC...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTATTGTTGGGGTCCTGCTaGCCTTGCTCTGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALLLGSC*PCSAAL
Trigger: TAAGGCTGCAGAGCAAGGGCAGCAGGACCCCAACAA...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCGGTCTGTTTGGTTTCTaGAGCAGCAAATCGCCATTC +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSGLFGF*SSKSPF
Trigger: GAATGGCGATTTGCTGCTGCAGAAACCAAACAGACC...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR GCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTGGTCTGTTTGGTTTCTaGAGCAGCAAATCGCCATTC +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVGLFGF*SSKSPF
Trigger: GAATGGCGATTTGCTGCTGCAGAAACCAAACAGACC...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCAGGTTCTGGATCCGGTaGAGTGCACAGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFRFWIR*SAQSVL
Trigger: CAAAACCGACTGTGCACTGCACCGGATCCAGAACCT...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATAGGTTCTGGATCCGGTaGAGTGCACAGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHRFWIR*SAQSVL
Trigger: CAAAACCGACTGTGCACTGCACCGGATCCAGAACCT...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCAGGTTCTGGATCCGGTaGAGTGCACAGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCRFWIR*SAQSVL
Trigger: CAAAACCGACTGTGCACTGCACCGGATCCAGAACCT...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACAGAACCCTGGAGATCTaGTGGGATGGAGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNRTLEI*WDGDGP
Trigger: CGGCCCGTCTCCATCCCAGCAGATCTCCAGGGTTCT...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAATGCTGACGATGGGCTaGGAGTGCAGCACGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTMLTMG*ECSTLR
Trigger: CCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCAT...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp CTGATGACAGTCACAGTGGCATCAGCCACGTTCATGTTCACTGACAGCCAGTCCGTTGGAAAATCTACTTaGAAAGGGACATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LMTVTVASATFMFTDSQSVGKST*KGTSRF
Trigger: GAACCTCGATGTCCCTTTGCAAGTAGATTTTCCAAC...GGACTGGCTGTCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR GCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTACCAATATTGCCCCACTaGACTCCAGCCTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALPILPH*TPAWEA
Trigger: TGCTTCCCAGGCTGGAGTGCAGTGGGGCAATATTGG...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCCGGGTTAACAGTGGCTaGATGCAAATCCTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIRVNSG*MQILVL
Trigger: GAGAACGAGGATTTGCATGCAGCCACTGTTAACCCG...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGTTTGGTGGTGTGGCTaGGCTGTTCCGATTTGTGAC +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFVWWCG*AVPICD
Trigger: GTCACAAATCGGAACAGCCCAGCCACACCACCAAAC...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACGTTTGGTGGTGTGGCTaGGCTGTTCCGATTTGTGAC +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHVWWCG*AVPICD
Trigger: GTCACAAATCGGAACAGCCCAGCCACACCACCAAAC...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGTTTGGTGGTGTGGCTaGGCTGTTCCGATTTGTGAC +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASVWWCG*AVPICD
Trigger: GTCACAAATCGGAACAGCCCAGCCACACCACCAAAC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGTTTGGTGGTGTGGCTaGGCTGTTCCGATTTGTGAC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHVWWCG*AVPICD
Trigger: GTCACAAATCGGAACAGCCCAGCCACACCACCAAAC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGAGGTTAAGGGTGTTTaGTGGTGTGGCTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLEVKGV*WCGWAV
Trigger: AACAGCCCAGCCACACCACCAAACACCCTTAACCTC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGAGGTTAAGGGTGTTTaGTGGTGTGGCTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFEVKGV*WCGWAV
Trigger: AACAGCCCAGCCACACCACCAAACACCCTTAACCTC...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAGAGGTTAAGGGTGTTTaGTGGTGTGGCTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGEVKGV*WCGWAV
Trigger: AACAGCCCAGCCACACCACCAAACACCCTTAACCTC...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTAAGGCCCATGGCCGCCTaGATGTTAGTTAGTGCATAT +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLRPMAA*MLVSAY
Trigger: ATATGCACTAACTAACATCCAGGCGGCCATGGGCCT...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGCAGCCTTACGGAGCTaGTTCTCCCCATTTTTCACC +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASAALRS*FSPFFT
Trigger: GGTGAAAAATGGGGAGAACCAGCTCCGTAAGGCTGC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGGCTCAGGTTTTTGTTaGGGTCCTGCTGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALGSGFC*GPAALA
Trigger: AGCAAGGGCAGCAGGACCCCAACAAAAACCTGAGCC...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGGCTCAGGTTTTTGTTaGGGTCCTGCTGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSGSGFC*GPAALA
Trigger: AGCAAGGGCAGCAGGACCCCAACAAAAACCTGAGCC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAGAGGAATCCTGTGGGTaGGGCTCTTTACCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGEESCG*GSLPSN
Trigger: GTTAGAGGGTAAAGAGCCCCACCCACAGGATTCCTC...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACGCTCGAGGAATCCTGTaGGTGGGGCTCTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYARGIL*VGLFTL
Trigger: GAGGGTAAAGAGCCCCACCCACAGGATTCCTCGAGC...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCTTAGTTCTCCTGGGCTaGGAGGGTAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSLVLLG*EGKISQ
Trigger: CTGTGAGATTTTACCCTCCCAGCCCAGGAGAACTAA...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTGGCCCTGGACTGGCTaGGATTTCTCTTCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYWPWTG*DFSSAV
Trigger: GACTGCGGAAGAGAAATCCCAGCCAGTCCAGGGCCA...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTGGCCTGGCCCTGGACTaGCTGGGATTTCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCGLALD*LGFLFR
Trigger: GCGGAAGAGAAATCCCAGCCAGTCCAGGGCCAGGCC...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGCCTGGCCCTGGACTaGCTGGGATTTCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTGLALD*LGFLFR
Trigger: GCGGAAGAGAAATCCCAGCCAGTCCAGGGCCAGGCC...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCGACACTGTGGCTACTTaGCCGTCTTCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVDTVAT*PSSGLD
Trigger: GTCCAGCCCTGAAGACGGCCAAGTAGCCACAGTGTC...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAACAACGTTGTCCAGCTaGACTCCTCATCGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALTTLSS*TPHRSV
Trigger: CACCGAGCGATGAGGAGTCCAGCTGGACAACGTTGT...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGTTTCATCCGGGGAGCTaGGTGAGGCACTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLFHPGS*VRHCLG
Trigger: CCCAAGACAGTGCCTCACCCAGCTCCCCGGATGAAA...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTTTCATCCGGGGAGCTaGGTGAGGCACTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVFHPGS*VRHCLG
Trigger: CCCAAGACAGTGCCTCACCCAGCTCCCCGGATGAAA...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATCCTTTCCTAGAACCCTaGAGATCTGCTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHPFLEP*RSAGME
Trigger: CTCCATCCCAGCAGATCTCCAGGGTTCTAGGAAAGG...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCCTTTCCTAGAACCCTaGAGATCTGCTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFPFLEP*RSAGME
Trigger: CTCCATCCCAGCAGATCTCCAGGGTTCTAGGAAAGG...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTCCTTTCCTAGAACCCTaGAGATCTGCTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSPFLEP*RSAGME
Trigger: CTCCATCCCAGCAGATCTCCAGGGTTCTAGGAAAGG...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTTCTCGTTCTCTGGGGTaGGAGATGGCGTTACAGAAC +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASSRSLG*EMALQN
Trigger: GTTCTGTAACGCCATCTCCCACCCCAGAGAACGAGA...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTTCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVSRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TGCAGCTATGGCATTTCGGTGACAGGGCGTTTCTGTTTCAAAGTGTCAATGAGGTCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSYGISVTGRFCFKVSMRSRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...CCTCATTGACACTTTGAAACAGAAACGCCCTGTCACCGAAATGCCATAGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCTCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRISRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCTTGGAGCAGATCTCGTaGAGACTTGTGGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRILEQIS*RLVAMA
Trigger: AGCCATTGCCACAAGTCTCCACGAGATCTGCTCCAA...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGGAGCAGATCTCGTaGAGACTTGTGGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSLEQIS*RLVAMA
Trigger: AGCCATTGCCACAAGTCTCCACGAGATCTGCTCCAA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTCATCGAGGTTCACATTaGCCCTTTCCTGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSHRGSH*PFPVRS
Trigger: GCTCCTTACAGGAAAGGGCCAATGTGAACCTCGATG...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVCTWNF*TSSVFG
Trigger: ACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCA...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGCCCAAGTACTGCACGTaGAACTTCTGGACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRPKYCT*NFWTSS
Trigger: TGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGG...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCCCAAGTACTGCACGTaGAACTTCTGGACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASPKYCT*NFWTSS
Trigger: TGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGG...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCCCCAAGTACTGCACGTaGAACTTCTGGACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFPKYCT*NFWTSS
Trigger: TGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGG...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCCCAAGTACTGCACGTaGAACTTCTGGACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLPKYCT*NFWTSS
Trigger: TGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGG...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACTCGCACCAGAAAACGTaGCACTCAAAGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDSHQKT*HSKRWF
Trigger: GAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGA...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLSEKAA*LPSTSD
Trigger: ATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGA...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTTCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVASEKAA*LPSTSD
Trigger: ATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGA...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGATCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGSEKAA*LPSTSD
Trigger: ATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGA...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTATGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTTGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTTGCATGTGCAGCTATaGCATTTCGGTGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHLHVQL*HFGDRA
Trigger: CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTTGCATGTGCAGCTATaGCATTTCGGTGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVLHVQL*HFGDRA
Trigger: CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAA...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTTGCATGTGCAGCTATaGCATTTCGGTGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCLHVQL*HFGDRA
Trigger: CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCTTGCATGTGCAGCTATaGCATTTCGGTGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFLHVQL*HFGDRA
Trigger: CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAA...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTTTGCATGTGCAGCTATaGCATTTCGGTGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASLHVQL*HFGDRA
Trigger: CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAA...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGGGGCTTCCAGGCAATaGCCTTGTGTCGAGTCATCT +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSGASRQ*PCVESS
Trigger: AGATGACTCGACACAAGGCCATTGCCTGGAAGCCCC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTAACAGAGGAAAGCTCTaGGGCTTCCAGGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSNRGKL*GFQAMA
Trigger: GGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTT...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGTGTTGCAATGCCTaGGACATGAACGGGCCATAC +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSLCCNA*DMNGPY
Trigger: GTATGGCCCGTTCATGTCCCAGGCATTGCAACACAA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGGAAGTAAGCTGCTCTaGAGGCCAGGAACTACTGCT +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDGSKLL*RPGTTA
Trigger: AGCAGTAGTTCCTGGCCTCCAGAGCAGCTTACTTCC...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTACCCAGATTTCTATCTaGTTGGTTAGGGTAGTCCAT +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLTQISI*LVRVVH
Trigger: ATGGACTACCCTAACCAACCAGATAGAAATCTGGGT...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTCAAATCCTCGTTCTCTaGGGTGGGAGATGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAQILVL*GGRWRY
Trigger: GTAACGCCATCTCCCACCCCAGAGAACGAGGATTTG...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
3UTR CAA 72 bp AACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTaGTGTCGAGTCATCTTACAAGTGTCCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: NRGKLWGFQAMA*CRVILQVSILK
Trigger: TTTCAAGATGGACACTTGTAAGATGACTCGACACAAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATCAAGGTGTCAACACCTaGGTCAGCTGGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHQGVNT*VSWKYF
Trigger: GAAGTACTTCCAGCTGACTCAGGTGTTGACACCTTG...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACTCCCGGCAATGTCACTaGCTCTTTTCCAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNSRQCH*LFSSQA
Trigger: CGCCTGGCTGGAAAAGAGTCAGTGACATTGCCGGGA...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCCACGTTCATGTTCACTaGCAGCCAGTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFHVHVH*QPVLLV
Trigger: AACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACCACGTTCATGTTCACTaGCAGCCAGTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHHVHVH*QPVLLV
Trigger: AACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCACGTTCATGTTCACTaGCAGCCAGTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASHVHVH*QPVLLV
Trigger: AACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACACGTTCATGTTCACTaGCAGCCAGTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGHVHVH*QPVLLV
Trigger: AACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACCACGTTCATGTTCACTaGCAGCCAGTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDHVHVH*QPVLLV
Trigger: AACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGCCTTCCCAACACCCATaGAGGACAGGAATCGCACAC +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLPSQHP*RTGIAH
Trigger: GTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGG...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATTTCGGTGACAGGGCGTTTCTGTTTCAAAGTGTCAATGAGGGATAAGACCCCTGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ISVTGRFCFKVSMRDKTPATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...AGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAACGCCCTGTCACCGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR TCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTGGTGGTCGAACTTTCTaGGAAGGCGGCCTGGCTACC +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCGGRTF*EGGLAT
Trigger: GGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACC...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGGACTCTTCTGGTTACTaGATCTGCTGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLDSSGY*ICWRWR
Trigger: CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTC...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCACTTCTGATATCGTAACATGCAGGCGGCCTGCACCGCCTCAGACACGTTACGTTTTACATTGGTTGTaGCTCTTCTGGTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: STSDIVTCRRPAPPQTRYVLHWL*LFWLLN
Trigger: ATTCAGTAACCAGAAGAGTCACAACCAATGTAAAAC...GTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR TCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGCTATGGCATTTCGGTaGCAGGGCGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSAMAFR*QGVSVS
Trigger: TGAAACAGAAACGCCCTGTCACCGAAATGCCATAGC...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGCTATGGCATTTCGGTaGCAGGGCGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLAMAFR*QGVSVS
Trigger: TGAAACAGAAACGCCCTGTCACCGAAATGCCATAGC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGCTATGGCATTTCGGTaGCAGGGCGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFAMAFR*QGVSVS
Trigger: TGAAACAGAAACGCCCTGTCACCGAAATGCCATAGC...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCTGCCTACTCCAATGTTaGAAACAGGGCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRICLLQC*KQGKVL
Trigger: CAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCA...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGCCATGGACAATACATaGTGGACAGACAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCAMDNT*WTDSFL
Trigger: CAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR TCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTGGAAAGGCTCTTCCTaGCGGATATGGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVWKGSS*RIWRQH
Trigger: GTGCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCA...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCCCACTCATTCCATCATaGTCTCTGGTGGCTAAGTAC +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIPLIPS*SLVAKY
Trigger: GTACTTAGCCACCAGAGATCATGATGGAATGAGTGG...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCAAGGAGCAGATGTATaGGGTGGCAAGTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLQGADV*GGKSVS
Trigger: AGACACAGACTTGCCACCTCATACATCTGCTCCTTG...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCAACTACTGCTTGCGTTaGCACGGTGTGAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFNYCLR*HGVSGY
Trigger: ATACCCACTCACACCGTGTCAACGCAAGCAGTAGTT...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGAACTACTGCTTGCGTTaGCACGGTGTGAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVNYCLR*HGVSGY
Trigger: ATACCCACTCACACCGTGTCAACGCAAGCAGTAGTT...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGAGGTGCAGGTTGCAGTaGGCCAATATTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLRCRLQ*ANIAPL
Trigger: CAGTGGGGCAATATTGGCTCACTGCAACCTGCACCT...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACGATCCGACCACAGCATaGTTGGCTACAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYDPTTA*LATDHS
Trigger: GCTGTGGTCTGTAGCCAAGCATGCTGTGGTCGGATC...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGCAGTCCCATGGTGATTaGCTCGGTTCTGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRQSHGD*LGSALV
Trigger: AACTAGAGCAGAACCGAGGCAATCACCATGGGACTG...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTCAGTCCCATGGTGATTaGCTCGGTTCTGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAQSHGD*LGSALV
Trigger: AACTAGAGCAGAACCGAGGCAATCACCATGGGACTG...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATCAGTCCCATGGTGATTaGCTCGGTTCTGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHQSHGD*LGSALV
Trigger: AACTAGAGCAGAACCGAGGCAATCACCATGGGACTG...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCAGTCCCATGGTGATTaGCTCGGTTCTGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFQSHGD*LGSALV
Trigger: AACTAGAGCAGAACCGAGGCAATCACCATGGGACTG...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTGGTCTGTTTGGTTTCTaGAGCAGCAAATCGCCATTC +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVGLFGF*SSKSPF
Trigger: GAATGGCGATTTGCTGCTGCAGAAACCAAACAGACC...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTAGGTTCTGGATCCGGTaGAGTGCACAGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSRFWIR*SAQSVL
Trigger: CAAAACCGACTGTGCACTGCACCGGATCCAGAACCT...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAAGGTTCTGGATCCGGTaGAGTGCACAGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALRFWIR*SAQSVL
Trigger: CAAAACCGACTGTGCACTGCACCGGATCCAGAACCT...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAAGAACCCTGGAGATCTaGTGGGATGGAGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTRTLEI*WDGDGP
Trigger: CGGCCCGTCTCCATCCCAGCAGATCTCCAGGGTTCT...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTCGGGTTAACAGTGGCTaGATGCAAATCCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVRVNSG*MQILPN
Trigger: ATTTGGAAGGATTTGCATGCAGCCACTGTTAACCCG...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR GCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGTCTACAGGTAACATaGCCAAGTACTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSCLQVT*PSTARG
Trigger: TCCACGTGCAGTACTTGGGCATGTTACCTGTAGACA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGAGTCCTTTTGCATGTaGAGCTATGGCATTTCGGTG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIESFCM*SYGISV
Trigger: CACCGAAATGCCATAGCTGCACATGCAAAAGGACTC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTCTTGTCAGGGAAAGCTaGCAGTTGGTTTCTATACTG +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVLVRES*QLVSIL
Trigger: CAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAG...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGGGGATAGAGCTGGATaGAGAATTCCAGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHGDRAG*RIPAER
Trigger: ACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGGGGATAGAGCTGGATaGAGAATTCCAGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASGDRAG*RIPAER
Trigger: ACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATCGTGAACATGGCTaGCTGTTTACCGAATCACAG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVHREHG*LFTESQ
Trigger: CTGTGATTCGGTAAACAGGCAGCCATGTTCACGATG...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTACATCGTGAACATGGCTaGCTGTTTACCGAATCACAG +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLHREHG*LFTESQ
Trigger: CTGTGATTCGGTAAACAGGCAGCCATGTTCACGATG...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGAGTTTGTGTTGCAATaGCTGGGACATGAACGGGCC +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSEFVLQ*LGHERA
Trigger: GGCCCGTTCATGTCCCAGGCATTGCAACACAAACTC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCGCAGTGAGCCAATATTaGCCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVAVSQY*PTALQP
Trigger: AGGCTGGAGTGCAGTGGGGCAATATTGGCTCACTGC...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGCAACTTCCTCACCTTTaGCTCCCGGTCCTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLQLPHL*LPVLPK
Trigger: CTTCGGAAGGACCGGGAGGCAAAGGTGAGGAAGTTG...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502841.5
ENST00000504305.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACCGGGTTAACAGTGGCTaGATGCAAATCCTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDRVNSG*MQILVL
Trigger: GAGAACGAGGATTTGCATGCAGCCACTGTTAACCCG...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTTTCTGTTCCACGGCTaGGCAGATCCGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVFLFHG*ADPTTA
Trigger: TGCTGTGGTCGGATCTGCCCAGCCGTGGAACAGAAA...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGTTTTCCCAGGTCTTTaGTACAAAGCTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQVFPGL*YKAQKA
Trigger: TGCCTTCTGAGCTTTGTACCAAAGACCTGGGAAAAC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGAAGTACTTCTGACATaGATCACCAGGCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIEVLLT*ITRRQQ
Trigger: TTGCTGACGCCTGGTGATCCATGTCAGAAGTACTTC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGTTTGGTGGTGTGGCTaGGCTGTTCCGATTTGTGAC +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSVWWCG*AVPICD
Trigger: GTCACAAATCGGAACAGCCCAGCCACACCACCAAAC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTGGGTGTTTGGTGGTGTaGCTGGGCTGTTCCGATTTG +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETGCLVV*LGCSDL
Trigger: CAAATCGGAACAGCCCAGCCACACCACCAAACACCC...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCGTTAAGGGTGTTTGGTaGTGTGGCTGGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVVKGVW*CGWAVP
Trigger: CGGAACAGCCCAGCCACACCACCAAACACCCTTAAC...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGAGGTTAAGGGTGTTTaGTGGTGTGGCTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALEVKGV*WCGWAV
Trigger: AACAGCCCAGCCACACCACCAAACACCCTTAACCTC...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAAGGCCCATGGCCGCCTaGATGTTAGTTAGTGCATAT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGRPMAA*MLVSAY
Trigger: ATATGCACTAACTAACATCCAGGCGGCCATGGGCCT...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACAGGCCCATGGCCGCCTaGATGTTAGTTAGTGCATAT +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDRPMAA*MLVSAY
Trigger: ATATGCACTAACTAACATCCAGGCGGCCATGGGCCT...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCTTAGTTCTCCTGGGCTaGGAGGGTAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRILVLLG*EGKISQ
Trigger: CTGTGAGATTTTACCCTCCCAGCCCAGGAGAACTAA...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACTGGCCCTGGACTGGCTaGGATTTCTCTTCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNWPWTG*DFSSAV
Trigger: GACTGCGGAAGAGAAATCCCAGCCAGTCCAGGGCCA...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTATCGGATGATCCTTCTTaGTTTCTGGGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLSDDPS*FLGWMT
Trigger: TGTCATCCAGCCCAGAAACCAAGAAGGATCATCCGA...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAGGTGAGGCACTGTCTTaGGACAACGTTGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQGEALS*DNVVQL
Trigger: CAGCTGGACAACGTTGTCCCAAGACAGTGCCTCACC...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGAGATCTGCTGGGATaGAGACGGGCCGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTGDLLG*RRAVPT
Trigger: AGTGGGAACGGCCCGTCTCCATCCCAGCAGATCTCC...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTACCTTTCCTAGAACCCTaGAGATCTGCTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALPFLEP*RSAGME
Trigger: CTCCATCCCAGCAGATCTCCAGGGTTCTAGGAAAGG...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLSRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTTCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVASRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGTCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRSRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTTGGAGCAGATCTCGTaGAGACTTGTGGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVLEQIS*RLVAMA
Trigger: AGCCATTGCCACAAGTCTCCACGAGATCTGCTCCAA...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTGGAGCAGATCTCGTaGAGACTTGTGGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLLEQIS*RLVAMA
Trigger: AGCCATTGCCACAAGTCTCCACGAGATCTGCTCCAA...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTTGGAGCAGATCTCGTaGAGACTTGTGGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHLEQIS*RLVAMA
Trigger: AGCCATTGCCACAAGTCTCCACGAGATCTGCTCCAA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCTTGGAGCAGATCTCGTaGAGACTTGTGGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFLEQIS*RLVAMA
Trigger: AGCCATTGCCACAAGTCTCCACGAGATCTGCTCCAA...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLCRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVCRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTCATCGAGGTTCACATTaGCCCTTTCCTGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSHRGSH*PFPVRS
Trigger: GCTCCTTACAGGAAAGGGCCAATGTGAACCTCGATG...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCCATCGAGGTTCACATTaGCCCTTTCCTGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCHRGSH*PFPVRS
Trigger: GCTCCTTACAGGAAAGGGCCAATGTGAACCTCGATG...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACCATCGAGGTTCACATTaGCCCTTTCCTGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHHRGSH*PFPVRS
Trigger: GCTCCTTACAGGAAAGGGCCAATGTGAACCTCGATG...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CTGATGACAGTCACAGTGGCATCAGCCACGTTCATGTTCACTGACAGCCAGTCCCTCAGTCTTTGGTGTTaGAAAATCTACTTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LMTVTVASATFMFTDSQSLSLWC*KIYLQR
Trigger: CCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAG...GGACTGGCTGTCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFCTWNF*TSSVFG
Trigger: ACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCCTWNF*TSSVFG
Trigger: ACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHCTWNF*TSSVFG
Trigger: ACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSCTWNF*TSSVFG
Trigger: ACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCA...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTTCGCACCAGAAAACGTaGCACTCAAAGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSSHQKT*HSKRWF
Trigger: GAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGA...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTTCTGAGAAGGCGGCCTaGCTACCAAGCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSSEKAA*LPSTSD
Trigger: ATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGA...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTGCTGGCGGTGGAGGTaGTCGAACTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYCWRWR*SNFLRR
Trigger: CCTTCTCAGAAAGTTCGACCACCTCCACCGCCAGCA...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTTTGCATGTGCAGCTATaGCATTTCGGTGACAGGGCG +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSLHVQL*HFGDRA
Trigger: CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAA...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTCATACTTTTTGGCCATaGCAGAAAGTGTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLHTFWP*QKVSEH
Trigger: ATGTTCAGACACTTTCTGCCATGGCCAAAAAGTATG...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTAACAGAGGAAAGCTCTaGGGCTTCCAGGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETNRGKL*GFQAMA
Trigger: GGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTT...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGGAAGTAAGCTGCTCTaGAGGCCAGGAACTACTGCT +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSGSKLL*RPGTTA
Trigger: AGCAGTAGTTCCTGGCCTCCAGAGCAGCTTACTTCC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTGTAATCTCAGCAGTTTaGGAGGCTGAGGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETVISAV*EAEVGT
Trigger: CGTGCCCACCTCAGCCTCCCAAACTGCTGAGATTAC...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACCCTCGTTCTCTGGGGTaGGAGATGGCGTTACAGAAC +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYPRSLG*EMALQN
Trigger: GTTCTGTAACGCCATCTCCCACCCCAGAGAACGAGG...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAACCTCGTTCTCTGGGGTaGGAGATGGCGTTACAGAAC +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQPRSLG*EMALQN
Trigger: GTTCTGTAACGCCATCTCCCACCCCAGAGAACGAGG...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCAGCTGGAAGTACTTCTaGCATGGATCACCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVSWKYF*HGSPGV
Trigger: GACGCCTGGTGATCCATGTCAGAAGTACTTCCAGCT...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACATCCGCAGTCCCATGGTaGTTGCCTCGGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTSAVPW*LPRFCS
Trigger: AGAGCAGAACCGAGGCAATCACCATGGGACTGCGGA...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGTTTCTGGGCTGGATaGCACTGTGGCTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTGFWAG*HCGYLA
Trigger: GGCCAAGTAGCCACAGTGTCATCCAGCCCAGAAACC...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCGTTACAGAACTAAGTaGCCCTTTCCTAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASRYRTK*PFPRTL
Trigger: CAGGGTTCTAGGAAAGGGTCACTTAGTTCTGTAACG...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCCGTTACAGAACTAAGTaGCCCTTTCCTAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFRYRTK*PFPRTL
Trigger: CAGGGTTCTAGGAAAGGGTCACTTAGTTCTGTAACG...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCGTTACAGAACTAAGTaGCCCTTTCCTAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFRYRTK*PFPRTL
Trigger: CAGGGTTCTAGGAAAGGGTCACTTAGTTCTGTAACG...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCGGTGTGGGGCATTTCTaGGTTTCAAAGATGCATAGC +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCGVGHF*VSKMHS
Trigger: GCTATGCATCTTTGAAACTCAGAAATGCCCCACACC...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGGTGTGGGGCATTTCTaGGTTTCAAAGATGCATAGC +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHGVGHF*VSKMHS
Trigger: GCTATGCATCTTTGAAACTCAGAAATGCCCCACACC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGGGTGTGGGGCATTTCTaGGTTTCAAAGATGCATAGC +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRGVGHF*VSKMHS
Trigger: GCTATGCATCTTTGAAACTCAGAAATGCCCCACACC...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGGTGTGGGGCATTTCTaGGTTTCAAAGATGCATAGC +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLGVGHF*VSKMHS
Trigger: GCTATGCATCTTTGAAACTCAGAAATGCCCCACACC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGGGGTCCACCAGGCTaGGCATGTCATTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCWGPPG*ACHSPG
Trigger: TCCTGGAGAATGACATGCTCAGCCTGGTGGACCCCA...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp TTCAAAGTGTCAATGAGGGATAAGACCCCTCGTTTTACATTGGTTGTGACTCTTCCTTCCCAACACCCATaGAGGACAGGAATCGCACAC +
Preference number: 4 (lower is better)
Translates to: FKVSMRDKTPRFTLVVTLPSQHP*RTGIAH
Trigger: GTGTGCGATTCCTGTCCTTCATGGGTGTTGGGAAGG...AAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR TCA 90 bp AAAATATCCATTCCGACTGGTTTGTCTACAGGTAACATGCCCAAGTACTGCACGGCTATGGCATTTCGGTaGCAGGGCGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: KISIPTGLSTGNMPKYCTAMAFR*QGVSVS
Trigger: TGAAACAGAAACGCCCTGTCACCGAAATGCCATAGC...CGTGCAGTACTTGGGCATGTTACCTGTAGACAAACCAGTCGGAATGGATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR TCA 90 bp GGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGCAGAACGTTTCTTTTCATATCACATaGTGGTGGCAAGACGAGAGA +
Preference number: 4 (lower is better)
Translates to: GKKHQRGIELDAEFQQNVSFHIT*WWQDER
Trigger: TCTCTCGTCTTGCCACCATCATGTGATATGAAAAGA...AACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGACCTTCCACTGCGCATaGTGTAACTTACAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQTFHCA*CNLQQK
Trigger: TTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGT...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTTGTaGCAGGTCCAGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGLKGCL*QVQPRR
Trigger: TCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAG...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCTTAAAGGTTGCTTGTaGCAGGTCCAGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLLKGCL*QVQPRR
Trigger: TCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAG...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCCTTAAAGGTTGCTTGTaGCAGGTCCAGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCLKGCL*QVQPRR
Trigger: TCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAG...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGTGCCTACTCCAATGTTaGAAACAGGGCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRCLLQC*KQGKVL
Trigger: CAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCA...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTGCCTACTCCAATGTTaGAAACAGGGCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCCLLQC*KQGKVL
Trigger: CAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTGCCTACTCCAATGTTaGAAACAGGGCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHCLLQC*KQGKVL
Trigger: CAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTTATAAGGCAGAAGTTTaGAATATGTCCCACCCAAAA +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLYKAEV*NMSHPK
Trigger: TTTTGGGTGGGACATATTTCAAACTTCTGCCTTATA...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTATTTCATGAACTTTGGTaGGATCTTAGGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLFHELW*DLRPVG
Trigger: ACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAA...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGATAGGGCACCATCATaGATACCACTGCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHDRAPS*IPLRKE
Trigger: TTCCTTACGCAGTGGTATTCATGATGGTGCCCTATC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGGATAGGGCACCATCATaGATACCACTGCGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRDRAPS*IPLRKE
Trigger: TTCCTTACGCAGTGGTATTCATGATGGTGCCCTATC...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp ATGAACGGGCCATACAAACAGAGGAAAGCTCTGGGGCTTCCAGGCAATGGCCTTACTGTAAATGATTTCTaGACAGCTTTTCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: MNGPYKQRKALGLPGNGLTVNDF*TAFQRA
Trigger: TGCCCTTTGAAAAGCTGTTCAGAAATCATTTACAGT...AAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAAACTACTGCTTGCGTTaGCACGGTGTGAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALNYCLR*HGVSGY
Trigger: ATACCCACTCACACCGTGTCAACGCAAGCAGTAGTT...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGAGGTTGTGGTGAGCTaGAATTACACCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALEVVVS*NYTTAL
Trigger: GAGTGCAGTGGTGTAATTTCAGCTCACCACAACCTC...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTAGGTGGAGGTTGTGGTaGGCTGAAATTACACCACTG +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSRWRLW*AEITPL
Trigger: CAGTGGTGTAATTTCAGCTCACCACAACCTCCACCT...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGCTACTCAGGAGGCTaGGGCGAGAATTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQSYSGG*GENCLN
Trigger: GTTCAAGCAATTCTCGCCTCAGCCTCCTGAGTAGCT...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGAGTTATGTTGATGACTaGAGTGGGGCTCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQSYVDD*SGAQVF
Trigger: AAAAACCTGAGCCCCACTGCAGTCATCAACATAACT...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR GCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTACAGTCCCATGGTGATTaGCTCGGTTCTGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALQSHGD*LGSALV
Trigger: AACTAGAGCAGAACCGAGGCAATCACCATGGGACTG...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGGTCTGTTTGGTTTCTaGAGCAGCAAATCGCCATTC +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSGLFGF*SSKSPF
Trigger: GAATGGCGATTTGCTGCTGCAGAAACCAAACAGACC...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGTGGCAATGGCTTTTaGTGGTGTGTCACATCGAAA +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSCGNGF*WCVTSK
Trigger: TTTCGATGTGACACACCAGCAAAAGCCATTGCCACA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTTGTGGCAATGGCTTTTaGTGGTGTGTCACATCGAAA +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVCGNGF*WCVTSK
Trigger: TTTCGATGTGACACACCAGCAAAAGCCATTGCCACA...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTGTCTACAGGTAACATaGCCAAGTACTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHCLQVT*PSTARG
Trigger: TCCACGTGCAGTACTTGGGCATGTTACCTGTAGACA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTGTCTACAGGTAACATaGCCAAGTACTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFCLQVT*PSTARG
Trigger: TCCACGTGCAGTACTTGGGCATGTTACCTGTAGACA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGTCTACAGGTAACATaGCCAAGTACTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLCLQVT*PSTARG
Trigger: TCCACGTGCAGTACTTGGGCATGTTACCTGTAGACA...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGTGTCTACAGGTAACATaGCCAAGTACTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRCLQVT*PSTARG
Trigger: TCCACGTGCAGTACTTGGGCATGTTACCTGTAGACA...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTGTCTACAGGTAACATaGCCAAGTACTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCCLQVT*PSTARG
Trigger: TCCACGTGCAGTACTTGGGCATGTTACCTGTAGACA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAAACATGCAGGCGGCCTaGACCGCCTCAGACACGTTA +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTNMQAA*TASDTL
Trigger: TAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTT...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATGAGTCCTTTTGCATGTaGAGCTATGGCATTTCGGTG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHESFCM*SYGISV
Trigger: CACCGAAATGCCATAGCTGCACATGCAAAAGGACTC...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGGAGTCCTTTTGCATGTaGAGCTATGGCATTTCGGTG +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVESFCM*SYGISV
Trigger: CACCGAAATGCCATAGCTGCACATGCAAAAGGACTC...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTGAGTCCTTTTGCATGTaGAGCTATGGCATTTCGGTG +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAESFCM*SYGISV
Trigger: CACCGAAATGCCATAGCTGCACATGCAAAAGGACTC...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGAGTCCTTTTGCATGTaGAGCTATGGCATTTCGGTG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFESFCM*SYGISV
Trigger: CACCGAAATGCCATAGCTGCACATGCAAAAGGACTC...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAGAGTCCTTTTGCATGTaGAGCTATGGCATTTCGGTG +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGESFCM*SYGISV
Trigger: CACCGAAATGCCATAGCTGCACATGCAAAAGGACTC...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGGAGTCCTTTTGCATGTaGAGCTATGGCATTTCGGTG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRESFCM*SYGISV
Trigger: CACCGAAATGCCATAGCTGCACATGCAAAAGGACTC...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCTTGTCAGGGAAAGCTaGCAGTTGGTTTCTATACTG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVLVRES*QLVSIL
Trigger: CAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAG...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCCTTGTCAGGGAAAGCTaGCAGTTGGTTTCTATACTG +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRILVRES*QLVSIL
Trigger: CAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAG...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTCTTGTCAGGGAAAGCTaGCAGTTGGTTTCTATACTG +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSLVRES*QLVSIL
Trigger: CAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAG...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCCATCGTGAACATGGCTaGCTGTTTACCGAATCACAG +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFHREHG*LFTESQ
Trigger: CTGTGATTCGGTAAACAGGCAGCCATGTTCACGATG...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTTTAACAGTGGCTGCATaGAAATCCTCGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVALTVAA*KSSFSG
Trigger: CCCAGAGAACGAGGATTTGCATGCAGCCACTGTTAA...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGATTAACAGTGGCTGCATaGAAATCCTCGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGLTVAA*KSSFSG
Trigger: CCCAGAGAACGAGGATTTGCATGCAGCCACTGTTAA...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGAAGTACTTCTGACATaGATCACCAGGCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASEVLLT*ITRRQQ
Trigger: TTGCTGACGCCTGGTGATCCATGTCAGAAGTACTTC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGAAGTACTTCTGACATaGATCACCAGGCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLEVLLT*ITRRQQ
Trigger: TTGCTGACGCCTGGTGATCCATGTCAGAAGTACTTC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCAACAGTTCATTGTaGGAGGATCGGAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSFNSSL*EDRRLR
Trigger: CCTTAACCTCCGATCCTCCCACAATGAACTGTTGAA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTATTCAACAGTTCATTGTaGGAGGATCGGAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLFNSSL*EDRRLR
Trigger: CCTTAACCTCCGATCCTCCCACAATGAACTGTTGAA...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCGAGGAATCCTGTGGGTaGGGCTCTTTACCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVEESCG*GSLPSN
Trigger: GTTAGAGGGTAAAGAGCCCCACCCACAGGATTCCTC...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTTAGTTCTCCTGGGCTaGGAGGGTAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHLVLLG*EGKISQ
Trigger: CTGTGAGATTTTACCCTCCCAGCCCAGGAGAACTAA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGTTAGTTCTCCTGGGCTaGGAGGGTAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRLVLLG*EGKISQ
Trigger: CTGTGAGATTTTACCCTCCCAGCCCAGGAGAACTAA...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTTAGTTCTCCTGGGCTaGGAGGGTAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFLVLLG*EGKISQ
Trigger: CTGTGAGATTTTACCCTCCCAGCCCAGGAGAACTAA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGTCTTGGTTTCTGGGCTaGATGACACTGTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRSWFLG*MTLWLL
Trigger: AAGTAGCCACAGTGTCATCCAGCCCAGAAACCAAGA...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTCGGATGATCCTTCTTaGTTTCTGGGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCSDDPS*FLGWMT
Trigger: TGTCATCCAGCCCAGAAACCAAGAAGGATCATCCGA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCGGATGATCCTTCTTaGTTTCTGGGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHSDDPS*FLGWMT
Trigger: TGTCATCCAGCCCAGAAACCAAGAAGGATCATCCGA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTCGGATGATCCTTCTTaGTTTCTGGGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVSDDPS*FLGWMT
Trigger: TGTCATCCAGCCCAGAAACCAAGAAGGATCATCCGA...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTCGGATGATCCTTCTTaGTTTCTGGGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFSDDPS*FLGWMT
Trigger: TGTCATCCAGCCCAGAAACCAAGAAGGATCATCCGA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCCCTTTCCTAGAACCCTaGAGATCTGCTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVPFLEP*RSAGME
Trigger: CTCCATCCCAGCAGATCTCCAGGGTTCTAGGAAAGG...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGCTGTTTCTCGTTCTCTaGGGTGGGAGATGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLLFLVL*GGRWRY
Trigger: GTAACGCCATCTCCCACCCCAGAGAACGAGAAACAG...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR CCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTAGGCAATGGCTTTTGCTaGTGTGTCACATCGAAATAC +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLGNGFC*CVTSKY
Trigger: GTATTTCGATGTGACACACCAGCAAAAGCCATTGCC...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTTCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSSRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACTGCAGGCCAGCGCTTTaGCATTCTTCCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNCRPAL*HSSVQP
Trigger: TGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCA...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSCTWNF*TSSVFG
Trigger: ACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCA...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAAATATCCATTCCGACTGGTTTGTCTACAGGTAACATGCCCAAGTACTGCACGTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KISIPTGLSTGNMPKYCTCTWNF*TSSVFG
Trigger: ACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCA...CGTGCAGTACTTGGGCATGTTACCTGTAGACAAACCAGTCGGAATGGATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCCCCAAGTACTGCACGTaGAACTTCTGGACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVPKYCT*NFWTSS
Trigger: TGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGG...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGGACAGGAATCGCACACGACATTCCACTAAGACTTCCTCTTCATTCTTTTCACCCAAGTACTGCACGTaGAACTTCTGGACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KDRNRTRHSTKTSSSFFSPKYCT*NFWTSS
Trigger: TGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGG...TGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGATTCCTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR CCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACTGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCGCACCAGAAAACGTaGCACTCAAAGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYSHQKT*HSKRWF
Trigger: GAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGA...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTCGCACCAGAAAACGTaGCACTCAAAGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVSHQKT*HSKRWF
Trigger: GAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGA...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRIGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCCAAAGCATCAGCAACTaGATGGAAGGTCGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVQSISN*MEGRMA
Trigger: CGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACGGGGCTTCCAGGCAATaGCCTTGTGTCGAGTCATCT +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNGASRQ*PCVESS
Trigger: AGATGACTCGACACAAGGCCATTGCCTGGAAGCCCC...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAGGAAGTAAGCTGCTCTaGAGGCCAGGAACTACTGCT +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQGSKLL*RPGTTA
Trigger: AGCAGTAGTTCCTGGCCTCCAGAGCAGCTTACTTCC...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACAGCTGGAAGTACTTCTaGCATGGATCACCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNSWKYF*HGSPGV
Trigger: GACGCCTGGTGATCCATGTCAGAAGTACTTCCAGCT...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTCAAGGTGTCAACACCTaGGTCAGCTGGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETQGVNT*VSWKYF
Trigger: GAAGTACTTCCAGCTGACTCAGGTGTTGACACCTTG...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR TCA 90 bp GCGGTGCAGCTTAATTTAACATATTGTTCAGTAAAGAATCCCATTGTGTATCATATCCGGGGAGCTGGGTaGGGCACTGTCTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: AVQLNLTYCSVKNPIVYHIRGAG*GTVLGQ
Trigger: TTGTCCCAAGACAGTGCCTCACCCAGCTCCCCGGAT...ATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR TCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGGTGTGGGGCATTTCTaGGTTTCAAAGATGCATAGC +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSGVGHF*VSKMHS
Trigger: GCTATGCATCTTTGAAACTCAGAAATGCCCCACACC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AAGGACAGGAATCGCACACGACATTCCACTAAGACTTCCTCTTCATTCTTTTCACACGTTCATGTTCACTaGCAGCCAGTCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: KDRNRTRHSTKTSSSFFSHVHVH*QPVLLV
Trigger: AACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG...TGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGATTCCTGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR TCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTTTCAAAGTGTCAATaGGGGATAAGACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSVSKCQ*GIRPLV
Trigger: AACGAGGGGTCTTATCCCTCATTGACACTTTGAAAC...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGTTTCAAAGTGTCAATaGGGGATAAGACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFVSKCQ*GIRPLV
Trigger: AACGAGGGGTCTTATCCCTCATTGACACTTTGAAAC...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGTTTCAAAGTGTCAATaGGGGATAAGACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLVSKCQ*GIRPLV
Trigger: AACGAGGGGTCTTATCCCTCATTGACACTTTGAAAC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGTTTCAAAGTGTCAATaGGGGATAAGACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASVSKCQ*GIRPLV
Trigger: AACGAGGGGTCTTATCCCTCATTGACACTTTGAAAC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCGCTATGGCATTTCGGTaGCAGGGCGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVAMAFR*QGVSVS
Trigger: TGAAACAGAAACGCCCTGTCACCGAAATGCCATAGC...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTGCTATGGCATTTCGGTaGCAGGGCGTTTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETAMAFR*QGVSVS
Trigger: TGAAACAGAAACGCCCTGTCACCGAAATGCCATAGC...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTACCTTCCACTGCGCATaGTGTAACTTACAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVTFHCA*CNLQQK
Trigger: TTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGT...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTCTTAAAGGTTGCTTGTaGCAGGTCCAGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSLKGCL*QVQPRR
Trigger: TCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAG...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTTTCATGAACTTTGGTaGGATCTTAGGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHFHELW*DLRPVG
Trigger: ACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACTTTCATGAACTTTGGTaGGATCTTAGGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHFHELW*DLRPVG
Trigger: ACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAA...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCCTACAGCGACCGAGATaGAAGATCACTGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRILQRPR*KITVND
Trigger: ATCATTTACAGTGATCTTTCATCTCGGTCGCTGTAG...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAACAAGGAGCAGATGTATaGGGTGGCAAGTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQQGADV*GGKSVS
Trigger: AGACACAGACTTGCCACCTCATACATCTGCTCCTTG...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTGTTGTGGTGAAATCTTaGGGAGTTTGTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSVVVKS*GVCVAM
Trigger: CATTGCAACACAAACTCCTCAAGATTTCACCACAAC...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GTATATGCCCAGAATCATTCTGGAAAGGCTCTTCCTGACGGATATGGAGGCAGCAAAGACTCGAGTTGGTaGCTAAATAGGCTTCTATGT +
Preference number: 4 (lower is better)
Translates to: VYAQNHSGKALPDGYGGSKDSSW*LNRLLC
Trigger: ACATAGAAGCCTATTTAGTCACCAACTCGAGTCTTT...GCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTGTGGAAGTGCAAGATaGACAAAAAGCGGGGACATA +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCCGSAR*TKSGDI
Trigger: TATGTCCCCGCTTTTTGTTCATCTTGCACTTCCACA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTGTGGAAGTGCAAGATaGACAAAAAGCGGGGACATA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFCGSAR*TKSGDI
Trigger: TATGTCCCCGCTTTTTGTTCATCTTGCACTTCCACA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp GCTAAGTTTCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTGAGGTTGTGGTGAGCTaGAATTACACCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: AKFLTYIRRSRKMLFWETEVVVS*NYTTAL
Trigger: GAGTGCAGTGGTGTAATTTCAGCTCACCACAACCTC...AGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCAGGTGGAGGTTGTGGTaGGCTGAAATTACACCACTG +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVRWRLW*AEITPL
Trigger: CAGTGGTGTAATTTCAGCTCACCACAACCTCCACCT...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR TCA 90 bp CCCTTGATGTTGCCAAGGAGCAGATGTATGAGGTGGCAAGTCTGTGTCTATCTACTCTACAGTAGCATGTaGAGTCACAATTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PLMLPRSRCMRWQVCVYLLYSSM*SHNLLP
Trigger: TGGCAACAAATTGTGACTTCACATGCTACTGTAGAG...TAGATAGACACAGACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTTGCATTTGGGAGGTGTaGTGTTCTTGGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSCIWEV*CSWFLC
Trigger: ACACAGAAACCAAGAACAGCACACCTCCCAAATGCA...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTGCATTTGGGAGGTGTaGTGTTCTTGGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHCIWEV*CSWFLC
Trigger: ACACAGAAACCAAGAACAGCACACCTCCCAAATGCA...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACTGCATTTGGGAGGTGTaGTGTTCTTGGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHCIWEV*CSWFLC
Trigger: ACACAGAAACCAAGAACAGCACACCTCCCAAATGCA...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGTTAACAGTGGCTGCATaGAAATCCTTCCAAATGTCA +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQLTVAA*KSFQMS
Trigger: TGACATTTGGAAGGATTTGCATGCAGCCACTGTTAA...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295974.12
ENST00000508593.6
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTTGTGGCAATGGCTTTTaGTGGTGTGTCACATCGAAA +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASCGNGF*WCVTSK
Trigger: TTTCGATGTGACACACCAGCAAAAGCCATTGCCACA...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGTGGCAATGGCTTTTaGTGGTGTGTCACATCGAAA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLCGNGF*WCVTSK
Trigger: TTTCGATGTGACACACCAGCAAAAGCCATTGCCACA...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTTGTGGCAATGGCTTTTaGTGGTGTGTCACATCGAAA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFCGNGF*WCVTSK
Trigger: TTTCGATGTGACACACCAGCAAAAGCCATTGCCACA...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp ACTAAGACTTCCTCTTCATTCTTTTCACTGATGACAGTCACAGTGGCATCAGCCTGTCTACAGGTAACATaGCCAAGTACTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: TKTSSSFFSLMTVTVASACLQVT*PSTARG
Trigger: TCCACGTGCAGTACTTGGGCATGTTACCTGTAGACA...GGCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
CDS-3UTR GCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGATAGCCGAGTCCTTTTaGATGTGCAGCTATGGCATT +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVIAESF*MCSYGI
Trigger: AATGCCATAGCTGCACATGCAAAAGGACTCGGCTAT...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCATAGCCGAGTCCTTTTaGATGTGCAGCTATGGCATT +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCIAESF*MCSYGI
Trigger: AATGCCATAGCTGCACATGCAAAAGGACTCGGCTAT...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATAGCCGAGTCCTTTTaGATGTGCAGCTATGGCATT +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFIAESF*MCSYGI
Trigger: AATGCCATAGCTGCACATGCAAAAGGACTCGGCTAT...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTATAGCCGAGTCCTTTTaGATGTGCAGCTATGGCATT +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAIAESF*MCSYGI
Trigger: AATGCCATAGCTGCACATGCAAAAGGACTCGGCTAT...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACCAAGACGAGAGAACATaGTTGTCTAACACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHQDERT*LSNTAW
Trigger: CCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCTTG...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp ACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGCTTGTCAGGGAAAGCTaGCAGTTGGTTTCTATACTG +
Preference number: 4 (lower is better)
Translates to: TGPAKKTVKLTHASFIPRLVRES*QLVSIL
Trigger: CAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAG...CCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR GCA 90 bp GCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATCGAAGCACCAAGCAGTaGTTTAGTCTGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ACDRSSQEDSETNSRIIHRSTKQ*FSLQRK
Trigger: TTTCCTTTGCAGACTAAAGCACTGCTTGGTGCTTCG...ATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTCGAAGCACCAAGCAGTaGTTTAGTCTGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVARSTKQ*FSLQRK
Trigger: TTTCCTTTGCAGACTAAAGCACTGCTTGGTGCTTCG...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACGAGTTTGTGTTGCAATaGCTGGGACATGAACGGGCC +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNEFVLQ*LGHERA
Trigger: GGCCCGTTCATGTCCCAGGCATTGCAACACAAACTC...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTCCAATATTGCCCCACTaGACTCCAGCCTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCPILPH*TPAWEA
Trigger: TGCTTCCCAGGCTGGAGTGCAGTGGGGCAATATTGG...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR GCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAACGGGTTAACAGTGGCTaGATGCAAATCCTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQRVNSG*MQILVL
Trigger: GAGAACGAGGATTTGCATGCAGCCACTGTTAACCCG...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506352.5
ENST00000513140.5
ENST00000513611.5
CDS-3UTR GCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACGGTGTTGGAAAATCTTaGAAAGGGACATCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHGVGKS*KGTSRF
Trigger: GAACCTCGATGTCCCTTTGCAAGATTTTCCAACACC...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513140.5
CDS-3UTR GCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGAATCACTCCATATATCTaGTGTTTCATCCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGITPYI*CFIRGA
Trigger: AGCTCCCCGGATGAAACAGCAGATATATGGAGTGAT...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508593.6
ENST00000513611.5
CDS-3UTR CCA 90 bp AGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTGTTTTCCCAGGTCTTTaGTACAAAGCTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RQSISNWMEGRMAEFIFFVFPGL*YKAQKA
Trigger: TGCCTTCTGAGCTTTGTACCAAAGACCTGGGAAAAC...AAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTGTTTTCCCAGGTCTTTaGTACAAAGCTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAVFPGL*YKAQKA
Trigger: TGCCTTCTGAGCTTTGTACCAAAGACCTGGGAAAAC...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGGTTTTCCCAGGTCTTTaGTACAAAGCTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVVFPGL*YKAQKA
Trigger: TGCCTTCTGAGCTTTGTACCAAAGACCTGGGAAAAC...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTCGACAGTCAACACATTaGCAGAGGCCTCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCRQSTH*QRPRQF
Trigger: GAACTGCCGAGGCCTCTGCCAATGTGTTGACTGTCG...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGAAGTACTTCTGACATaGATCACCAGGCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSEVLLT*ITRRQQ
Trigger: TTGCTGACGCCTGGTGATCCATGTCAGAAGTACTTC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
CDS-3UTR CCA 90 bp TTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGTGTTTGGTGGTGTaGCTGGGCTGTTCCGATTTG +
Preference number: 4 (lower is better)
Translates to: LQQFNGICYAVPTPMLKTGCLVV*LGCSDL
Trigger: CAAATCGGAACAGCCCAGCCACACCACCAAACACCC...TGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp GTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTTAAAGGTTGCTTCAACAGTTCATTGTaGGAGGATCGGAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: VPTPMLKTGQSAVGLKGCFNSSL*EDRRLR
Trigger: CCTTAACCTCCGATCCTCCCACAATGAACTGTTGAA...GCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGAGGCCCATGGCCGCCTaGATGTTAGTTAGTGCATAT +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLRPMAA*MLVSAY
Trigger: ATATGCACTAACTAACATCCAGGCGGCCATGGGCCT...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTGGCTCAGGTTTTTGTTaGGGTCCTGCTGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCGSGFC*GPAALA
Trigger: AGCAAGGGCAGCAGGACCCCAACAAAAACCTGAGCC...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTGGCTGGATGACACTGTaGCTACTTGGCCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCGWMTL*LLGRLQ
Trigger: CTGAAGACGGCCAAGTAGCCACAGTGTCATCCAGCC...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTATCTTGGTTTCTGGGCTaGATGACACTGTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALSWFLG*MTLWLL
Trigger: AAGTAGCCACAGTGTCATCCAGCCCAGAAACCAAGA...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGCTGAGTCGTTCCTGTTaGGATGTGCCAATAATAGGT +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVLSRSC*DVPIIG
Trigger: ACCTATTATTGGCACATCCCAACAGGAACGACTCAG...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp ATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAAAGTGCTGTAGGACTGAGTCGTTCCTGTTaGGATGTGCCAATAATAGGT +
Preference number: 4 (lower is better)
Translates to: ICYAVPTPMLKTGQSAVGLSRSC*DVPIIG
Trigger: ACCTATTATTGGCACATCCCAACAGGAACGACTCAG...TCCTACAGCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR CCA 90 bp AGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGGCAATGGCTTTTGCTaGTGTGTCACATCGAAATAC +
Preference number: 4 (lower is better)
Translates to: RSSQEDSETNSRIIHSKDGNGFC*CVTSKY
Trigger: GTATTTCGATGTGACACACCAGCAAAAGCCATTGCC...GTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTGGCAATGGCTTTTGCTaGTGTGTCACATCGAAATAC +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAGNGFC*CVTSKY
Trigger: GTATTTCGATGTGACACACCAGCAAAAGCCATTGCC...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGGCAATGGCTTTTGCTaGTGTGTCACATCGAAATAC +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASGNGFC*CVTSKY
Trigger: GTATTTCGATGTGACACACCAGCAAAAGCCATTGCC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCGGCAATGGCTTTTGCTaGTGTGTCACATCGAAATAC +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFGNGFC*CVTSKY
Trigger: GTATTTCGATGTGACACACCAGCAAAAGCCATTGCC...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACGGCAATGGCTTTTGCTaGTGTGTCACATCGAAATAC +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHGNGFC*CVTSKY
Trigger: GTATTTCGATGTGACACACCAGCAAAAGCCATTGCC...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGTCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLSRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAATCTCGTGGAGACTTGTaGCAATGGCTTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQSRGDL*QWLLLV
Trigger: CACCAGCAAAAGCCATTGCCACAAGTCTCCACGAGA...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCATGCTTCTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCCATCGAGGTTCACATTaGCCCTTTCCTGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SCFFSYHMMVARRENMLVHRGSH*PFPVRS
Trigger: GCTCCTTACAGGAAAGGGCCAATGTGAACCTCGATG...GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGAAAACAGGGCAACATCGAGGTTCACATTaGCCCTTTCCTGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QFNGICYAVPTPMLKTGQHRGSH*PFPVRS
Trigger: GCTCCTTACAGGAAAGGGCCAATGTGAACCTCGATG...TTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp GCTGTAGACATGAAATGGTGTCCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCGACCAGCTCAGTCTTTaGTGTTGGAAAATCTACTTG +
Preference number: 4 (lower is better)
Translates to: AVDMKWCPCVKELVRESCDQLSL*CWKIYL
Trigger: CAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTC...GCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTCATGTCTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTGACCAGCTCAGTCTTTaGTGTTGGAAAATCTACTTG +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVDQLSL*CWKIYL
Trigger: CAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTC...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGTGCACGTGGAACTTCTaGACCAGCTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLCTWNF*TSSVFG
Trigger: ACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCA...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACTCCAATGTTGGCACTCAAAGCGCTaGTTCCCCGTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: SYFYSNSMVSAMQCLLQCWHSKR*FPVSMM
Trigger: CATCATGGACACGGGGAACCAGCGCTTTGAGTGCCA...ACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp TTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCATTCGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LLVTGPAKKTVKLTHASFGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KASATGWKVGWRSSFSLVGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SNWMEGRMAEFIFFSVASGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...ACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTGGATGGAAGGTCGGATaGCGGAGTTCATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVAGWKVG*RSSFSL
Trigger: TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCC...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AGCTTTCTGGGCAAAAAGCATCAGAGGGGGATAGAGCTGGATGCAGAATTCCAGTTTACCTCTAGCACATaGACTAGCAAAAATCACACG +
Preference number: 4 (lower is better)
Translates to: SFLGKKHQRGIELDAEFQFTSST*TSKNHT
Trigger: CGTGTGATTTTTGCTAGTCCATGTGCTAGAGGTAAA...CTGGAATTCTGCATCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR CCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTTTCCATCATGATCTCTaGTGGCTAAGTACCATGAGT +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVFHHDL*WLSTMS
Trigger: ACTCATGGTACTTAGCCACCAGAGATCATGATGGAA...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp AAGGTTGCTTGTGACAGGTCCAGCCAAGAAGACAGTGAAACTAACTCACGCATCAGCAGATGTATGAGGTaGCAAGTCTGTGTCTATCTA +
Preference number: 4 (lower is better)
Translates to: KVACDRSSQEDSETNSRISRCMR*QVCVYL
Trigger: TAGATAGACACAGACTTGCCACCTCATACATCTGCT...GATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp CTTTTCATATCACATGATGGTGGCAAGACGAGAGAACATGCTTGTCTAACACTGTTGTGTTGCAATGCCTaGGACATGAACGGGCCATAC +
Preference number: 4 (lower is better)
Translates to: LFISHDGGKTREHACLTLLCCNA*DMNGPY
Trigger: GTATGGCCCGTTCATGTCCCAGGCATTGCAACACAA...CAGTGTTAGACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000543538.5
CDS-3UTR CCA 90 bp AAAATATCCATTCCGACTGGTTTGTCTACAGGTAACATGCCCAAGTACTGCACGGCCATAATCTTACCTTaGAGCAGATCTCGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: KISIPTGLSTGNMPKYCTAIILP*SRSRGD
Trigger: GTCTCCACGAGATCTGCTCCAAGGTAAGATTATGGC...CGTGCAGTACTTGGGCATGTTACCTGTAGACAAACCAGTCGGAATGGATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510925.5
3UTR CAA 72 bp CCATGTGTCAAAGAGCTTGTCAGGGAAAGCTGCCAGTaGGTTTCTATACTGATGCCAACAGCCAATTTTGTC +
Preference number: 4 (lower is better)
Translates to: PCVKELVRESCQ*VSILMPTANFV
Trigger: GACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCTTTGACACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTGGATCAGTCTGAAATaGGTGATCACTCCATATATC +
Preference number: 4 (lower is better)
Translates to: EDKASATGWKVGWRSSFSWISLK*VITPYI
Trigger: GATATATGGAGTGATCACTCATTTCAGACTGATCCA...AGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp AATTCTCTGAAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTTGGATCAGTCTGAAATaGGTGATCACTCCATATATC +
Preference number: 4 (lower is better)
Translates to: NSLKTKHQQLDGRSDGGVWISLK*VITPYI
Trigger: GATATATGGAGTGATCACTCATTTCAGACTGATCCA...AACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295974.12
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp ACTCGCCATCCTATTTTTACAGCAATTCAATGGTATCTGCTATGCAGTGCCTACCGTTACAGAACTAAGTaGCCCTTTCCTAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: TRHPIFTAIQWYLLCSAYRYRTK*PFPRTL
Trigger: CAGGGTTCTAGGAAAGGGTCACTTAGTTCTGTAACG...GTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
CDS-3UTR TCA 90 bp TCTCACCTACATACGAAGGAGCAGGAAAATGCTGTTTTGGGAAACTTGTTAAACGCTACCAAGCACTTCTaGTATCGTAACATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SHLHTKEQENAVLGNLLNATKHF*YRNMQA
Trigger: CGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGC...GTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295974.12
ENST00000508593.6
ENST00000513140.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAGAAGACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTTCAAAGTGTCAATaGGGGATAAGACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: QEDSETNSRIIHSKDAALVSKCQ*GIRPLV
Trigger: AACGAGGGGTCTTATCCCTCATTGACACTTTGAAAC...TAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp TGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTAGTCAATCTGTTTCAAAGTGTCAATaGGGGATAAGACCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: WMEGRMAEFIFFSVASQSVSKCQ*GIRPLV
Trigger: AACGAGGGGTCTTATCCCTCATTGACACTTTGAAAC...AGATTGACTAGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTTCTTTTCATATCACATaGTGGTGGCAAGACGAGAGA +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSSFHIT*WWQDER
Trigger: TCTCTCGTCTTGCCACCATCATGTGATATGAAAAGA...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp GACAGTGAAACTAACTCACGCATCATTCATTCCAAGGACGCAGCGTTAGTTCACTCTTTTCATATCACATaGTGGTGGCAAGACGAGAGA +
Preference number: 4 (lower is better)
Translates to: DSETNSRIIHSKDAALVHSFHIT*WWQDER
Trigger: TCTCTCGTCTTGCCACCATCATGTGATATGAAAAGA...GTGAACTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp ATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTGTAGCTTCTTTTCATATCACATaGTGGTGGCAAGACGAGAGA +
Preference number: 4 (lower is better)
Translates to: ISNWMEGRMAEFIFFSVASFHIT*WWQDER
Trigger: TCTCTCGTCTTGCCACCATCATGTGATATGAAAAGA...AGCTACACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp CAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTTAGTACCTTCCACTGCGCATaGTGTAACTTACAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: QSISNWMEGRMAEFIFFSTFHCA*CNLQQK
Trigger: TTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGT...ACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295974.12
ENST00000502841.5
ENST00000504305.5
ENST00000506352.5
ENST00000508593.6
ENST00000513140.5
ENST00000513611.5
ENST00000543538.5
CDS-3UTR TCA 90 bp AAGACAAAGCATCAGCAACTGGATGGAAGGTCGGATGGCGGAGTTCATTTTCTTACCTTCCACTGCGCATaGTGTAACTTACAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: KTKHQQLDGRSDGGVHFLTFHCA*CNLQQK
Trigger: TTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGT...AAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTT
44% GC, longest homopolymer 5 nt, total homopolym