RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APBA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000034053

Ensembl transcript IDs: ENST00000382938.3, ENST00000411764.5, ENST00000558206.1, ENST00000558259.5, ENST00000558330.5, ENST00000558402.5, ENST00000558804.5, ENST00000559814.5, ENST00000560283.5, ENST00000561069.5, ENST00000612449.2, ENST00000620457.4, ENST00000631894.1, ENST00000631996.1, ENST00000632204.1, ENST00000632247.1, ENST00000632415.1, ENST00000633212.1, ENST00000683413.1

Found 972 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: GEGTPFGEPASVAGL*RRGQVCGPAPSSSG
Trigger: CCCAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR CCA 90 bp ATCAAGTGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: IKWVVRAHPLGSQRP*LGCGVGVKSAARLP
Trigger: TGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCACTTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR CCA 90 bp CAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTaGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGGAC +
Preference number: 1 (lower is better)
Translates to: QVVSWEPGCPCPCSQ*QRQLFGTIVGAPQD
Trigger: GTCCTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR GCA 90 bp CTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCC +
Preference number: 1 (lower is better)
Translates to: LSLQVVSWEPGCPCP*SQWQRQLFGTIVGA
Trigger: GGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR GCA 90 bp ACACACTCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAGAACGTGGCAAAATACTTGGAACGC +
Preference number: 1 (lower is better)
Translates to: THSTPRTATETHPGL*REKTVQNVAKYLER
Trigger: GCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR CCA 90 bp GAAAGACACACACTCCACACCACGCACAGCTACCGAGACACACCCTaGCTTGTGCAGGGAGAAGACAGTCCAGAACGTGGCAAAATACTT +
Preference number: 1 (lower is better)
Translates to: ERHTLHTTHSYRDTP*LVQGEDSPERGKIL
Trigger: AAGTATTTTGCCACGTTCTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGAGTGTGTGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: GCPAPGAASLGGASSLRTARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 2 (lower is better)
Translates to: RGDGCPAPGAASLGGASSGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAACCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: GAASLGGASSLRTASGRKASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp CCGGGTATGCAGCCGGGTGGGAGGGTGCCCAGAAGAGACGACGGGAGAGGCAGGGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PGMQPGGRVPRRDDGRGRGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...CCTGCCTCTCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCTGCATACCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACCCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACATACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: GCPAPGAASLGGASSLRTYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp CCACTACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PLLLRATAPRWPRGLHSRGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...CCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp CCACTACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGAGCCGGGTGGGAGGGTaGCCAGAAGAGACGACGGGA +
Preference number: 2 (lower is better)
Translates to: PLLLRATAPRWPRGLHSRSRVGG*PEETTG
Trigger: TCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCT...CCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGAGCCGGGTGGGAGGGTaGCCAGAAGAGACGACGGGA +
Preference number: 2 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWSRVGG*PEETTG
Trigger: TCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCT...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGCCGGGTGGGAGGGTaGCCAGAAGAGACGACGGGA +
Preference number: 2 (lower is better)
Translates to: QGHCATLAKGSALTAGCFSRVGG*PEETTG
Trigger: TCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCT...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGATCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 2 (lower is better)
Translates to: SRVPRRRQFAPHSFREERSVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PQTFITSRVLGARLPVSLARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACACCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: STPRTATETHPGLCREKTPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 2 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 2 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGCCTCGGGGTCGCATGTaGGTGGATGTGTGTAGATCG +
Preference number: 2 (lower is better)
Translates to: TAPRWPRGLHSRLAALGAPRGRM*VDVCRS
Trigger: CGATCTACACACATCCACGCACATGCGACCCCGAGG...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp GCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: ARSLPTGSCMQHTALLEYASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...GTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR TCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: SRVPRRRQFAPHSFREERKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp GAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 2 (lower is better)
Translates to: EVFLRVAACNTRHSSNTVGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...GACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGATACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: SRVPRRRQFAPHSFREERYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp ACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTTTACAAGTCGTGTCCTaGGAGCCAGGCTGCCCGTGT +
Preference number: 2 (lower is better)
Translates to: TLAKGSALTAGCFRCGQGLQVVS*EPGCPC
Trigger: ACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAA...ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR TCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp AGACGACGGGAGAGGCAGGTGTGGTCATTAGTCACATTGGAAAACCCTAGAGTCGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: RRRERQVWSLVTLENPRVARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...GACTCTAGGGTTTTCCAATGTGACTAATGACCACACCTGCCTCTCCCGTCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 2 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQTHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp AGACGACGGGAGAGGCAGGTGTGGTCATTAGTCACATTGGAAAACCCTAGAGTCCCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: RRRERQVWSLVTLENPRVPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...GACTCTAGGGTTTTCCAATGTGACTAATGACCACACCTGCCTCTCCCGTCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp TTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGTCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 2 (lower is better)
Translates to: LGAAKVAFSRVGFVSSGSSVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...CGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 2 (lower is better)
Translates to: GCPAPGAASLGGASSLRTTWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGGCAGAGGCAGCTGTTTaGGACCATTGTGGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMAEAAV*DHCGGP
Trigger: GGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGC...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTGGGGTCGCATGTGCGTaGATGTGTGTAGATCGATTT +
Preference number: 2 (lower is better)
Translates to: QGHCATLAKGSALTAGCFGVACA*MCVDRF
Trigger: AAATCGATCTACACACATCCACGCACATGCGACCCC...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp AGACGACGGGAGAGGCAGGTGTGGTCATTAGTCACATTGGAAAACCCTAGAGTCGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: RRRERQVWSLVTLENPRVASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...GACTCTAGGGTTTTCCAATGTGACTAATGACCACACCTGCCTCTCCCGTCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp GCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACGCACTCACGGCTGGCTaGTTTAGGTGCGGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: ARSLPTGSCMQHTALLEYALTAG*FRCGQG
Trigger: ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGC...GTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAACCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 2 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMTHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp AGACGACGGGAGAGGCAGGTGTGGTCATTAGTCACATTGGAAAACCCTAGAGTCGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: RRRERQVWSLVTLENPRVGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...GACTCTAGGGTTTTCCAATGTGACTAATGACCACACCTGCCTCTCCCGTCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp GAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCGCTGGCCAAGGGGTCTaGACTCACGGCTGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: EVFLRVAACNTRHSSNTVAGQGV*THGWLL
Trigger: AAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGC...GACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR TCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR TCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: PNFHYKSCPGSQAARVPAKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 2 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVTHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTGCACTCACGGCTGGCTaGTTTAGGTGCGGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPALTAG*FRCGQG
Trigger: ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGC...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAAACTGCTCAGGGCCACTaGGCCACGCTGGCCAAGGGG +
Preference number: 2 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQTAQGH*ATLAKG
Trigger: CCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGT...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGAGACAGTCCAGAACGTaGCAAAATACTTGGAACGCT +
Preference number: 2 (lower is better)
Translates to: TSRVLGARLPVSLQSVAERQSRT*QNTWNA
Trigger: AGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCT...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGTACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR GCA 90 bp CTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAAAGGCACTCACGGCTGGCTaGTTTAGGTGCGGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: LRVAACNTRHSSNTVILKALTAG*FRCGQG
Trigger: ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGC...CTTTAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 2 (lower is better)
Translates to: GAASLGGASSLRTASGRKTWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR CAA 90 bp GACACACACTCCACACCACGCACAGCTACCGAGACACACCCTGGCTaGTGCAGGGAGAAGACAGTCCAGAACGTGGCAAAATACTTGGAA +
Preference number: 2 (lower is better)
Translates to: DTHSTPRTATETHPG*CREKTVQNVAKYLE
Trigger: TTCCAAGTATTTTGCCACGTTCTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGAGTGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR GCA 90 bp CTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAAAGGCTGGCTGCTTTAGGTaGGGCCAAGGTCGCGTTTTC +
Preference number: 2 (lower is better)
Translates to: LRVAACNTRHSSNTVILKAGCFR*GQGRVF
Trigger: GAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGC...CTTTAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSIYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp CTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAAAGTTACAAGTCGTGTCCTaGGAGCCAGGCTGCCCGTGT +
Preference number: 2 (lower is better)
Translates to: LRVAACNTRHSSNTVILKLQVVS*EPGCPC
Trigger: ACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAA...CTTTAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp GCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACCGGGAGAGGCAGGTGTaGTCATTAGTCACATTGGAA +
Preference number: 2 (lower is better)
Translates to: ARSLPTGSCMQHTALLEYRERQV*SLVTLE
Trigger: TTCCAATGTGACTAATGACCACACCTGCCTCTCCCG...GTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp GATATGCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGGGGGTCGCATGTGCGTaGATGTGTGTAGATCGATTT +
Preference number: 2 (lower is better)
Translates to: DMREVFLRVAACNTRHSSGVACA*MCVDRF
Trigger: AAATCGATCTACACACATCCACGCACATGCGACCCC...CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGCATATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR TCA 90 bp ACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTCAAACATTTGTTCTGTaGCTCTCCTTTGATAAAGAC +
Preference number: 2 (lower is better)
Translates to: TLAKGSALTAGCFRCGQGQTFVL*LSFDKD
Trigger: GTCTTTATCAAAGGAGAGTCACAGAACAAATGTTTG...ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp ACGTGGCAAAATACTTGGAACGCTTTACAAACAAACATTTGTTCTGTGACTCTCGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 2 (lower is better)
Translates to: TWQNTWNALQTNICSVTLGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...GAGAGTCACAGAACAAATGTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp GTGGCAAAATACTTGGAACGCTTTACAAACAAACATTTGTTCTGTGACTCTCCTGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: VAKYLERFTNKHLFCDSPASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...AGGAGAGTCACAGAACAAATGTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAAGACAGTCCAGAACGTaGCAAAATACTTGGAACGCT +
Preference number: 2 (lower is better)
Translates to: PNFHYKSCPGSQAARVPARQSRT*QNTWNA
Trigger: AGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGAGACAGTCCAGAACGTaGCAAAATACTTGGAACGCT +
Preference number: 2 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVRQSRT*QNTWNA
Trigger: AGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCT...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTGCTAATGAACCGAGCTaGACTAGATCCGACTTGATC +
Preference number: 2 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPANEPS*TRSDLI
Trigger: GATCAAGTCGGATCTAGTCCAGCTCGGTTCATTAGC...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR TCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTGACTTCGAGACAAGATaGCGTCAGATTACATGGATC +
Preference number: 2 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPDFETR*RQITWI
Trigger: GATCCATGTAATCTGACGTCATCTTGTCTCGAAGTC...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACAACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 2 (lower is better)
Translates to: STPRTATETHPGLCREKTTWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 2 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVTWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAAGCTAATGAACCGAGCTaGACTAGATCCGACTTGATC +
Preference number: 2 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQANEPS*TRSDLI
Trigger: GATCAAGTCGGATCTAGTCCAGCTCGGTTCATTAGC...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CCA 90 bp GAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 2 (lower is better)
Translates to: EVFLRVAACNTRHSSNTVTWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...GACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR CAA 90 bp CCTGGCTTGTGCAGGGAGAAGACAGTCCAGAACGTGGCAAAATACTaGGAACGCTTTACAAACAAACATTTGTTCTGTGACTCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: PGLCREKTVQNVAKY*ERFTNKHLFCDSPL
Trigger: CAAAGGAGAGTCACAGAACAAATGTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCTTCTCCCTGCACAAGCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGTGAGGGCACACCCTTaGGGGAGCCAGCGTCCGTGG +
Preference number: 3 (lower is better)
Translates to: GCPAPGAASLGGASSLRTVRAHP*GSQRPW
Trigger: CCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCAC...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR CCA 72 bp ACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: TPFGEPASVAGL*RRGQVCGPAPS
Trigger: GCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR CCA 72 bp GTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCC +
Preference number: 3 (lower is better)
Translates to: VVRAHPLGSQRP*LGCGVGVKSAA
Trigger: GGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGAGCTGTTTGGGACCATaGTGGGGGCCCCACAGGACC +
Preference number: 3 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWSCLGP*WGPHRT
Trigger: GGTCCTGTGGGGCCCCCACAATGGTCCCAAACAGCT...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGAGCTGTTTGGGACCATaGTGGGGGCCCCACAGGACC +
Preference number: 3 (lower is better)
Translates to: TAPRWPRGLHSRLAALGASCLGP*WGPHRT
Trigger: GGTCCTGTGGGGCCCCCACAATGGTCCCAAACAGCT...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGGTGAGGGCACACCCTTaGGGGAGCCAGCGTCCGTGG +
Preference number: 3 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWVRAHP*GSQRPW
Trigger: CCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCAC...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR CCA 72 bp CACATGCCACTACTGCTCAGGGCCACTGCGCCACGCTaGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTA +
Preference number: 3 (lower is better)
Translates to: HMPLLLRATAPR*PRGLHSRLAAL
Trigger: TAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTAGTGGCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGTGAGGGCACACCCTTaGGGGAGCCAGCGTCCGTGG +
Preference number: 3 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCVRAHP*GSQRPW
Trigger: CCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCAC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGGTGAGGGCACACCCTTaGGGGAGCCAGCGTCCGTGG +
Preference number: 3 (lower is better)
Translates to: PQTFITSRVLGARLPVSLVRAHP*GSQRPW
Trigger: CCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCAC...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGAGACACACCCTGGCTaGTGCAGGGAGAAGACAGTC +
Preference number: 3 (lower is better)
Translates to: TAPRWPRGLHSRLAALGAETHPG*CREKTV
Trigger: GACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTC...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGGCAGAGGCAGCTGTTaGGGACCATTGTGGGGGCCC +
Preference number: 3 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCGRGSC*GPLWGP
Trigger: GGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGGGCAGAGGCAGCTGTTaGGGACCATTGTGGGGGCCC +
Preference number: 3 (lower is better)
Translates to: PQTFITSRVLGARLPVSLGRGSC*GPLWGP
Trigger: GGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCC...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp CTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGCAGAGGCAGCTGTTaGGGACCATTGTGGGGGCCC +
Preference number: 3 (lower is better)
Translates to: LHSRLAALGAAKVAFSRVGRGSC*GPLWGP
Trigger: GGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCC...CACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR GCA 72 bp CAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATT +
Preference number: 3 (lower is better)
Translates to: QVVSWEPGCPCP*SQWQRQLFGTI
Trigger: AATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGAGCTGTTTGGGACCATaGTGGGGGCCCCACAGGACC +
Preference number: 3 (lower is better)
Translates to: PQTFITSRVLGARLPVSLSCLGP*WGPHRT
Trigger: GGTCCTGTGGGGCCCCCACAATGGTCCCAAACAGCT...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAAGCTGTTTGGGACCATaGTGGGGGCCCCACAGGACC +
Preference number: 3 (lower is better)
Translates to: PNFHYKSCPGSQAARVPASCLGP*WGPHRT
Trigger: GGTCCTGTGGGGCCCCCACAATGGTCCCAAACAGCT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp GATATGCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAGCTGTTTGGGACCATaGTGGGGGCCCCACAGGACC +
Preference number: 3 (lower is better)
Translates to: DMREVFLRVAACNTRHSSSCLGP*WGPHRT
Trigger: GGTCCTGTGGGGCCCCCACAATGGTCCCAAACAGCT...CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGCATATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp TTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGGTGAGGGCACACCCTTaGGGGAGCCAGCGTCCGTGG +
Preference number: 3 (lower is better)
Translates to: FPRGRMCVDVCRSILKRGVRAHP*GSQRPW
Trigger: CCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCAC...CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGAGACACACCCTGGCTaGTGCAGGGAGAAGACAGTC +
Preference number: 3 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCETHPG*CREKTV
Trigger: GACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp GATATGCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGGAGACACACCCTGGCTaGTGCAGGGAGAAGACAGTC +
Preference number: 3 (lower is better)
Translates to: DMREVFLRVAACNTRHSSETHPG*CREKTV
Trigger: GACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTC...CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGCATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGAGACACACCCTGGCTaGTGCAGGGAGAAGACAGTC +
Preference number: 3 (lower is better)
Translates to: PNFHYKSCPGSQAARVPAETHPG*CREKTV
Trigger: GACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTC...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGATTCTGTGACTCTCCTTaGATAAAGACATACCCCTTT +
Preference number: 3 (lower is better)
Translates to: SRVPRRRQFAPHSFREERFCDSP*IKTYPF
Trigger: AAAGGGGTATGTCTTTATCAAAGGAGAGTCACAGAA...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAAACGTGGCAAAATACTaGGAACGCTTTACAAACAAA +
Preference number: 3 (lower is better)
Translates to: GAASLGGASSLRTASGRKNVAKY*ERFTNK
Trigger: TTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGTT...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR GCA 72 bp ACACCACGCACAGCTACCGAGACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAGAACGTGGCAAAATAC +
Preference number: 3 (lower is better)
Translates to: TPRTATETHPGL*REKTVQNVAKY
Trigger: GTATTTTGCCACGTTCTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAAACGTGGCAAAATACTaGGAACGCTTTACAAACAAA +
Preference number: 3 (lower is better)
Translates to: SRVPRRRQFAPHSFREERNVAKY*ERFTNK
Trigger: TTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGTT...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACAACGTGGCAAAATACTaGGAACGCTTTACAAACAAA +
Preference number: 3 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHNVAKY*ERFTNK
Trigger: TTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGTT...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGAACGTGGCAAAATACTaGGAACGCTTTACAAACAAA +
Preference number: 3 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGNVAKY*ERFTNK
Trigger: TTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGTT...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp AGACAAGATGACGTCAGATTACATGGATCGCTAATGAACCGAGCTGGACTAGATGGCAGAGGCAGCTGTTaGGGACCATTGTGGGGGCCC +
Preference number: 3 (lower is better)
Translates to: RQDDVRLHGSLMNRAGLDGRGSC*GPLWGP
Trigger: GGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCC...ATCTAGTCCAGCTCGGTTCATTAGCGATCCATGTAATCTGACGTCATCTTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGTTCTGTGACTCTCCTTaGATAAAGACATACCCCTTT +
Preference number: 3 (lower is better)
Translates to: PQTFITSRVLGARLPVSLFCDSP*IKTYPF
Trigger: AAAGGGGTATGTCTTTATCAAAGGAGAGTCACAGAA...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR GCA 72 bp AGTGATATGCGCGAAGTCTTCCTACGGGTAGCTGCATaGAACACACGGCACTCCTCGAATACAGTCATCCTA +
Preference number: 3 (lower is better)
Translates to: SDMREVFLRVAA*NTRHSSNTVIL
Trigger: TAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGCATATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCTTCTGTGACTCTCCTTaGATAAAGACATACCCCTTT +
Preference number: 3 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVFCDSP*IKTYPF
Trigger: AAAGGGGTATGTCTTTATCAAAGGAGAGTCACAGAA...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp AGACAAGATGACGTCAGATTACATGGATCGCTAATGAACCGAGCTGGACTAGATGAGACACACCCTGGCTaGTGCAGGGAGAAGACAGTC +
Preference number: 3 (lower is better)
Translates to: RQDDVRLHGSLMNRAGLDETHPG*CREKTV
Trigger: GACTGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTC...ATCTAGTCCAGCTCGGTTCATTAGCGATCCATGTAATCTGACGTCATCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp CTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAAAGTGGACTAGATCCGACTaGATCTACACACATGCCACT +
Preference number: 3 (lower is better)
Translates to: LRVAACNTRHSSNTVILKWTRSD*IYTHAT
Trigger: AGTGGCATGTGTGTAGATCAAGTCGGATCTAGTCCA...CTTTAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR GCA 72 bp TTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTaGGTGGATGTGTGTAGATCGATTTTAAAGAGGGGG +
Preference number: 3 (lower is better)
Translates to: FLEWVSFPRGRM*VDVCRSILKRG
Trigger: CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGTATGGAGTTTTCATGTaGTGGCCATCATCCTTTATT +
Preference number: 3 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVYGVFM*WPSSFI
Trigger: AATAAAGGATGATGGCCACAACATGAAAACTCCATA...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR-3UTR CAA 90 bp TTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGTTCTGTGACTCTCCTTaGATAAAGACATACCCCTTT +
Preference number: 3 (lower is better)
Translates to: FPRGRMCVDVCRSILKRGFCDSP*IKTYPF
Trigger: AAAGGGGTATGTCTTTATCAAAGGAGAGTCACAGAA...CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
3UTR CCA 72 bp GCAGGGAGAAGACAGTCCAGAACGTGGCAAAATACTTaGAACGCTTTACAAACAAACATTTGTTCTGTGACT +
Preference number: 3 (lower is better)
Translates to: AGRRQSRTWQNT*NALQTNICSVT
Trigger: AGTCACAGAACAAATGTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCTTCTCCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
3UTR-3UTR CAA 90 bp AGACAAGATGACGTCAGATTACATGGATCGCTAATGAACCGAGCTGGACTAGATTTCTGTGACTCTCCTTaGATAAAGACATACCCCTTT +
Preference number: 3 (lower is better)
Translates to: RQDDVRLHGSLMNRAGLDFCDSP*IKTYPF
Trigger: AAAGGGGTATGTCTTTATCAAAGGAGAGTCACAGAA...ATCTAGTCCAGCTCGGTTCATTAGCGATCCATGTAATCTGACGTCATCTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACACTGCCTTCAGCCTCGTaGCCGTGGGGGTGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTLPSAS*PWGCGP
Trigger: GGGCCCGCACCCCCACGGCCACGAGGCTGAAGGCAG...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCCCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
76% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGGCAGTCCTGAGAGGCTaGCCGGGGCATGCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSAVLRG*PGHAAS
Trigger: AGACGCCGCATGCCCCGGTCAGCCTCTCAGGACTGC...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTACAGCTCCCTCCGCCTaGCCAGGGCGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPATAPSA*PGRWAA
Trigger: GGCAGCCCAGCGCCCTGGCCAGGCGGAGGGAGCTGT...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558330.5
ENST00000558402.5
CDS-3UTR TCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCGCAGTCCTGAGAGGCTaGCCGGGGCATGCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPAVLRG*PGHAAS
Trigger: AGACGCCGCATGCCCCGGTCAGCCTCTCAGGACTGC...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACATCCTGGGAGCCAGGCTaGCCGTGTCCCTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTSWEPG*PCPCSQ
Trigger: CTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGA...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCACTGCTCAGGGCCACTaGGCCACGCTGGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPTAQGH*ATLAKG
Trigger: CCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGT...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCCCTGGGCCCCGGGCGTaGTCTCGATGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPPGPRA*SRCSPE
Trigger: CTCAGGACTGCATCGAGACCACGCCCGGGGCCCAGG...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGTGCTTCTTGCCTTCCTaGGCCCCGGGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSCFLPS*APGVVS
Trigger: CGAGACCACGCCCGGGGCCCAGGAAGGCAAGAAGCA...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACATGCTTCTTGCCTTCCTaGGCCCCGGGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTCFLPS*APGVVS
Trigger: CGAGACCACGCCCGGGGCCCAGGAAGGCAAGAAGCA...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGCAGTCCTGAGAGGCTaGCCGGGGCATGCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLAVLRG*PGHAAS
Trigger: AGACGCCGCATGCCCCGGTCAGCCTCTCAGGACTGC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTGGGCCCCGGGCGTaGTCTCGATGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPAPGPRA*SRCSPE
Trigger: CTCAGGACTGCATCGAGACCACGCCCGGGGCCCAGG...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGACAGGGTGTGCACTGTaGGCCAGGTACTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSTGCAL*ARYSSP
Trigger: CGGGGAGGAGTACCTGGCCCACAGTGCACACCCTGT...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCGCCACTGCGCCACGCTaGCCAAGGGGTCTGCACTCA +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPATAPR*PRGLHS
Trigger: TGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGC...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACACCTCACTGGCGCTGGTaGTGCTGGTCATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTPHWRW*CWSCSD
Trigger: GTCTGAGCATGACCAGCATCACCAGCGCCAGTGAGG...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCTACAGCGGGGTCTCCTaGCCCGTGAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPYSGVS*PVRSLN
Trigger: GTTCAGGCTCCTCACGGGTCAGGAGACCCCGCTGTA...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAAGGCCGAGCTCTTTGTaGGCCCGCGCCGAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQRPSSL*ARAEPH
Trigger: GTGCGGCTCGGCGCGGGCTCACAAAGAGCTCGGCCT...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558330.5
ENST00000558402.5
CDS-3UTR GCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGGCTGCTCCAGACCATTaGAAACCTGCTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSAAPDH*KPARGA
Trigger: GGCCCCACGAGCAGGTTTGCAATGGTCTGGAGCAGC...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCGCTGGCCAAGGGGTCTaGACTCACGGCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPAGQGV*THGWLL
Trigger: AAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGC...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAACTGCCTTCAGCCTCGTaGCCGTGGGGGTGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKLPSAS*PWGCGP
Trigger: GGGCCCGCACCCCCACGGCCACGAGGCTGAAGGCAG...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTTGGCCAGGATCACCGTaGGCAGGATGGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPAWPGSP*AGWSPS
Trigger: GCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCCA...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCTGGCCAGGATCACCGTaGGCAGGATGGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLWPGSP*AGWSPS
Trigger: GCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCCA...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTCCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QGHCATLAKGSALTAGCFPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTTCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPASVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCGCAGTCCTGAGAGGCTaGCCGGGGCATGCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGAVLRG*PGHAAS
Trigger: AGACGCCGCATGCCCCGGTCAGCCTCTCAGGACTGC...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGTCTCGATGCAGTCCTaGGAGGCTGACCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLVSMQS*EADRGM
Trigger: CATGCCCCGGTCAGCCTCTCAGGACTGCATCGAGAC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCCCTCACTGGCGCTGGTaGTGCTGGTCATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPPHWRW*CWSCSD
Trigger: GTCTGAGCATGACCAGCATCACCAGCGCCAGTGAGG...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTTACAGCGGGGTCTCCTaGCCCGTGAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPAYSGVS*PVRSLN
Trigger: GTTCAGGCTCCTCACGGGTCAGGAGACCCCGCTGTA...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAAGGCCGAGCTCTTTGTaGGCCCGCGCCGAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKRPSSL*ARAEPH
Trigger: GTGCGGCTCGGCGCGGGCTCACAAAGAGCTCGGCCT...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558330.5
ENST00000558402.5
CDS-3UTR GCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCGGCTGACGGCCTCCTaGGCTTGCATCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSRLTAS*ACIILM
Trigger: CATCAGAATGATGCAAGCGCAGGAGGCCGTCAGCCG...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCGGGCGTGGTCTCGATaGAGTCCTGAGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLRAWSR*SPERLT
Trigger: GGTCAGCCTCTCAGGACTGCATCGAGACCACGCCCG...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACATCTTATACTGCTTCTTaGCTTCCTGGGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTSYTAS*LPGPRA
Trigger: CGCCCGGGGCCCAGGAAGGCAAGAAGCAGTATAAGA...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAAGTGTCCACAGGGTGTaGACTGTGGGCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTSVHRV*TVGQVL
Trigger: GAGTACCTGGCCCACAGTGCACACCCTGTGGACACT...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAAGGATCTCGCCCTTGTaGTTCTCCAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTRISPL*FSSCSS
Trigger: GGAGCTGCAGCTGGAGAAGCACAAGGGCGAGATCCT...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGGCTGGCTGCTTTAGGTaGGGCCAAGGTCGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSAGCFR*GQGRVF
Trigger: GAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGC...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCCACACATGCCACTACTaGTCAGGGCCACTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPHTCHY*SGPLRH
Trigger: GTGGCGCAGTGGCCCTGAGCAGTAGTGGCATGTGTG...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCGCTGCTGCTTCCTTaGCTGCTCCAGACCATTGCA +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTALLLP*LLQTIA
Trigger: TGCAATGGTCTGGAGCAGCCAAGGAAGCAGCAGCGC...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCTGGGCCCCGGGCGTaGTCTCGATGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGPGPRA*SRCSPE
Trigger: CTCAGGACTGCATCGAGACCACGCCCGGGGCCCAGG...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCCCTGGTCTCACCCTATaGTCCAACATGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPPGLTL*SNMPLP
Trigger: GGGGAGCGGCATGTTGGACCATAGGGTGAGACCAGG...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCACAGGGTGTGCACTGTaGGCCAGGTACTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLTGCAL*ARYSSP
Trigger: CGGGGAGGAGTACCTGGCCCACAGTGCACACCCTGT...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGCCACGCTGAAGGCCTaGCCGATAGACTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLATLKA*PIDWAM
Trigger: CATCGCCCAGTCTATCGGCCAGGCCTTCAGCGTGGC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACATGGACTATCTTCTCGTaGGCTGTGGCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTWTIFS*AVATTL
Trigger: GAGCGTGGTGGCCACAGCCCACGAGAAGATAGTCCA...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGTGGACTATCTTCTCGTaGGCTGTGGCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSWTIFS*AVATTL
Trigger: GAGCGTGGTGGCCACAGCCCACGAGAAGATAGTCCA...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGCTGCGTGGCCAGGCTaGGGTGGCCTAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLAAWPG*GGLDVQ
Trigger: CTGTACATCTAGGCCACCCCAGCCTGGCCACGCAGC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGTTACAAGTCGTGTCCTaGGAGCCAGGCTGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSLQVVS*EPGCPC
Trigger: ACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAA...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACATTACAAGTCGTGTCCTaGGAGCCAGGCTGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTLQVVS*EPGCPC
Trigger: ACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAA...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCACTGGCGCTGGTaGTGCTGGTCATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPAPHWRW*CWSCSD
Trigger: GTCTGAGCATGACCAGCATCACCAGCGCCAGTGAGG...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGAGATCAGAGCGCTGCTaGTTCCTTGGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSRSERC*FLGCSR
Trigger: TCTGGAGCAGCCAAGGAAGCAGCAGCGCTCTGATCT...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCAGGCTGACCGGGGCATaGGGCGTCTGGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGRLTGA*GVWPSA
Trigger: TGCTGATGGCCAGACGCCGCATGCCCCGGTCAGCCT...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGCTGCTCCAGACCATTaGAAACCTGCTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLAAPDH*KPARGA
Trigger: GGCCCCACGAGCAGGTTTGCAATGGTCTGGAGCAGC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLAKGSALTAGCFRCGQGARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSTHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSGPLRHAGQGVCTHGWLGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...CAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGAGCCGGGTGGGAGGGTaGCCAGAAGAGACGACGGGA +
Preference number: 4 (lower is better)
Translates to: CSGPLRHAGQGVCTHGWLSRVGG*PEETTG
Trigger: TCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCT...CAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCCCTCGGGGTCGCATGTaGGTGGATGTGTGTAGATCG +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPPRGRM*VDVCRS
Trigger: CGATCTACACACATCCACGCACATGCGACCCCGAGG...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTACTGCTCAGGGCCACTaGGCCACGCTGGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QGHCATLAKGSALTAGCFTAQGH*ATLAKG
Trigger: CCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGT...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGACTGCTCAGGGCCACTaGGCCACGCTGGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWTAQGH*ATLAKG
Trigger: CCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGT...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTTCCTACGGGTAGCTaGATGCAACACACGGCACTC +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSLPTGS*MQHTAL
Trigger: GAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCGGGGCATGCGGCGTCTaGCCATCAGCACTACAATGT +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPGACGV*PSALQC
Trigger: ACATTGTAGTGCTGATGGCCAGACGCCGCATGCCCC...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAACCTGGGCCCCGGGCGTaGTCTCGATGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKPGPRA*SRCSPE
Trigger: CTCAGGACTGCATCGAGACCACGCCCGGGGCCCAGG...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCCTGGGCCCCGGGCGTaGTCTCGATGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWPGPRA*SRCSPE
Trigger: CTCAGGACTGCATCGAGACCACGCCCGGGGCCCAGG...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCACTACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCCTGGGCCCCGGGCGTaGTCTCGATGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLLLRATAPRWPRGLHSRPGPRA*SRCSPE
Trigger: CTCAGGACTGCATCGAGACCACGCCCGGGGCCCAGG...CCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCTGGTCTCACCCTATaGTCCAACATGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLPGLTL*SNMPLP
Trigger: GGGGAGCGGCATGTTGGACCATAGGGTGAGACCAGG...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTGGTCTCACCCTATaGTCCAACATGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPAPGLTL*SNMPLP
Trigger: GGGGAGCGGCATGTTGGACCATAGGGTGAGACCAGG...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAATGGCCAGGATCACCGTaGGCAGGATGGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQWPGSP*AGWSPS
Trigger: GCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCCA...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCACGCTGAAGCCCAGCTaGTACTTGAGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLTLKPS*YLRSGR
Trigger: GCGGCCAGACCTCAAGTACCAGCTGGGCTTCAGCGT...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCGGGTATGCAGCCGGGTGGGAGGGTGCCCAGAAGAGACGACGGGAGAGGCAGGGTGGCCAGGCTGGGGTaGCCTAGATGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PGMQPGGRVPRRDDGRGRVARLG*PRCTAG
Trigger: CCCCGCTGTACATCTAGGCCACCCCAGCCTGGCCAC...CCTGCCTCTCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCTGCATACCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTGGCCAGGCTGGGGTaGCCTAGATGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQVARLG*PRCTAG
Trigger: CCCCGCTGTACATCTAGGCCACCCCAGCCTGGCCAC...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTCCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLAKGSALTAGCFRCGQGPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGSVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAATCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQSVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGACAGCTCCCTCCGCCTaGCCAGGGCGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQTAPSA*PGRWAA
Trigger: GGCAGCCCAGCGCCCTGGCCAGGCGGAGGGAGCTGT...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558330.5
ENST00000558402.5
CDS-3UTR TCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGTCCTCTGGGTGGAAATaGAGAGGTCCACTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSSSGWK*RGPLPS
Trigger: TGACGGAAGTGGACCTCTTCATTTCCACCCAGAGGA...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCTCAAGTCTTCGGGGTTaGTGCCATTGGCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPSSLRG*CHWLAG
Trigger: TCCTGCGAGCCAATGGCATCAACCCCGAAGACTTGA...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAATACAGCGGGGTCTCCTaGCCCGTGAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQYSGVS*PVRSLN
Trigger: GTTCAGGCTCCTCACGGGTCAGGAGACCCCGCTGTA...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTACAGCGGGGTCTCCTaGCCCGTGAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGYSGVS*PVRSLN
Trigger: GTTCAGGCTCCTCACGGGTCAGGAGACCCCGCTGTA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCCGGGCGTGGTCTCGATaGAGTCCTGAGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGRAWSR*SPERLT
Trigger: GGTCAGCCTCTCAGGACTGCATCGAGACCACGCCCG...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAACGGGCGTGGTCTCGATaGAGTCCTGAGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQRAWSR*SPERLT
Trigger: GGTCAGCCTCTCAGGACTGCATCGAGACCACGCCCG...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCTCTTATACTGCTTCTTaGCTTCCTGGGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLSYTAS*LPGPRA
Trigger: CGCCCGGGGCCCAGGAAGGCAAGAAGCAGTATAAGA...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTTCTTATACTGCTTCTTaGCTTCCTGGGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPASYTAS*LPGPRA
Trigger: CGCCCGGGGCCCAGGAAGGCAAGAAGCAGTATAAGA...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACATTGTGCTTCTCCAGCTaGAGCTCCTTGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTLCFSS*SSLQFS
Trigger: GGAGAACTGCAAGGAGCTGCAGCTGGAGAAGCACAA...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTAGGATCTCGCCCTTGTaGTTCTCCAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPARISPL*FSSCSS
Trigger: GGAGCTGCAGCTGGAGAAGCACAAGGGCGAGATCCT...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGGCACTCACGGCTGGCTaGTTTAGGTGCGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLALTAG*FRCGQG
Trigger: ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGC...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCTACGGGTAGCTGCATaGAACACACGGCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLLRVAA*NTRHSS
Trigger: CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGCGCTGCTGCTTCCTTaGCTGCTCCAGACCATTGCA +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLALLLP*LLQTIA
Trigger: TGCAATGGTCTGGAGCAGCCAAGGAAGCAGCAGCGC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCACTTCCGTCAGCGTCTaGGCATCCCCCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPTSVSV*ASPSEF
Trigger: GAATTCTGAGGGGGATGCCCAGACGCTGACGGAAGT...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGAGGCGTGGTCCATCATaGTTTCCTGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSRRGPS*FPACLH
Trigger: ATGCAGACACGCAGGAAACCATGATGGACCACGCCT...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCGGGGCATGCGGCGTCTaGCCATCAGCACTACAATGT +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLGACGV*PSALQC
Trigger: ACATTGTAGTGCTGATGGCCAGACGCCGCATGCCCC...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAATGCTTCTTGCCTTCCTaGGCCCCGGGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKCFLPS*APGVVS
Trigger: CGAGACCACGCCCGGGGCCCAGGAAGGCAAGAAGCA...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCTCTCAAGCTTCCGGTaGGCCATGGCAGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLLSSFR*AMAVVH
Trigger: GTGAACGACTGCCATGGCCCACCGGAAGCTTGAGAG...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAACAGGGTGTGCACTGTaGGCCAGGTACTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQTGCAL*ARYSSP
Trigger: CGGGGAGGAGTACCTGGCCCACAGTGCACACCCTGT...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGCCACGCTGAAGGCCTaGCCGATAGACTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGATLKA*PIDWAM
Trigger: CATCGCCCAGTCTATCGGCCAGGCCTTCAGCGTGGC...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAATGGCCAGGATCACCGTaGGCAGGATGGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKWPGSP*AGWSPS
Trigger: GCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCCA...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCACTACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGTGGCCAGGATCACCGTaGGCAGGATGGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PLLLRATAPRWPRGLHSRWPGSP*AGWSPS
Trigger: GCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCCA...CCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCTGGACTATCTTCTCGTaGGCTGTGGCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLWTIFS*AVATTL
Trigger: GAGCGTGGTGGCCACAGCCCACGAGAAGATAGTCCA...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGCTGCGTGGCCAGGCTaGGGTGGCCTAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQAAWPG*GGLDVQ
Trigger: CTGTACATCTAGGCCACCCCAGCCTGGCCACGCAGC...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAATCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKSVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGTCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWSVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCGGGTATGCAGCCGGGTGGGAGGGTGCCCAGAAGAGACGACGGGAGAGGCAGGGCAGAGGCAGCTGTTTaGGACCATTGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGMQPGGRVPRRDDGRGRAEAAV*DHCGGP
Trigger: GGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGC...CCTGCCTCTCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCTGCATACCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCGCAGAGGCAGCTGTTTaGGACCATTGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGAEAAV*DHCGGP
Trigger: GGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGC...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGCAGAGGCAGCTGTTTaGGACCATTGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGAEAAV*DHCGGP
Trigger: GGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGC...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGGCAGTCCTGAGAGGCTaGCCGGGGCATGCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQAVLRG*PGHAAS
Trigger: AGACGCCGCATGCCCCGGTCAGCCTCTCAGGACTGC...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACGCAGTCCTGAGAGGCTaGCCGGGGCATGCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHAVLRG*PGHAAS
Trigger: AGACGCCGCATGCCCCGGTCAGCCTCTCAGGACTGC...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTTCAAGTCTTCGGGGTTaGTGCCATTGGCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPASSLRG*CHWLAG
Trigger: TCCTGCGAGCCAATGGCATCAACCCCGAAGACTTGA...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGCTGCTCCAGACCATTaGAAACCTGCTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQAAPDH*KPARGA
Trigger: GGCCCCACGAGCAGGTTTGCAATGGTCTGGAGCAGC...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCCCAGCTGCAGCTCCTTaGAGTTCTCCGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPPAAAP*SSPSLR
Trigger: TCTCAAACTCGGAGAACTGCAAGGAGCTGCAGCTGG...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCTTGTGCTTCTCCAGCTaGAGCTCCTTGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPLCFSS*SSLQFS
Trigger: GGAGAACTGCAAGGAGCTGCAGCTGGAGAAGCACAA...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGAGGATCTCGCCCTTGTaGTTCTCCAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLRISPL*FSSCSS
Trigger: GGAGCTGCAGCTGGAGAAGCACAAGGGCGAGATCCT...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGGTCGATGAGGTCTTCTaGTTCGCAGGGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLVDEVF*FAGPWN
Trigger: GTTCCAGGGCCCTGCGAACCAGAAGACCTCATCGAC...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGTGCTTCTTGCCTTCCTaGGCCCCGGGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: TAPRWPRGLHSRLAALGACFLPS*APGVVS
Trigger: CGAGACCACGCCCGGGGCCCAGGAAGGCAAGAAGCA...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCTCCACAGGACAGTCCTaGCCTATTGGTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPSTGQS*PIGGLS
Trigger: GGACAAACCACCAATAGGCCAGGACTGTCCTGTGGA...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTGTGAGGGACAGGACCTaGTCTCACCCTATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPAVRDRT*SHPMVQ
Trigger: TTGGACCATAGGGTGAGACCAGGTCCTGTCCCTCAC...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTGCCACGCTGAAGGCCTaGCCGATAGACTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: QGHCATLAKGSALTAGCFATLKA*PIDWAM
Trigger: CATCGCCCAGTCTATCGGCCAGGCCTTCAGCGTGGC...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCGCCATTCATCATGTTaGCCAGGATCACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLRHSSC*PGSPWA
Trigger: TGCCCACGGTGATCCTGGCCAACATGATGAATGGCG...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGAGCTTCACCTGTGTCTaGTTCTTCAGGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSSFTCV*FFRPLM
Trigger: CATCAAGGGCCTGAAGAACCAGACACAGGTGAAGCT...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCCTGGTACTTGAGGTCTaGCCGCTTGATAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPLVLEV*PLDKDR
Trigger: ACGGTCCTTATCAAGCGGCCAGACCTCAAGTACCAG...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGAGTTGGACAGAGCTTaGACTATCTTCTCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTELDRA*TIFSWA
Trigger: AGCCCACGAGAAGATAGTCCAAGCTCTGTCCAACTC...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGTCTCTCCGACCGAGTTaGACAGAGCTTGGACTATCT +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSSLRPS*TELGLS
Trigger: AGATAGTCCAAGCTCTGTCCAACTCGGTCGGAGAGA...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCACATGGCGGCGGGCATaGTCTTCATGTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLTWRRA*SSCGSL
Trigger: GAGAGATCCACATGAAGACCATGCCCGCCGCCATGT...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTACATGGCGGCGGGCATaGTCTTCATGTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPATWRRA*SSCGSL
Trigger: GAGAGATCCACATGAAGACCATGCCCGCCGCCATGT...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAGTGGCCAGGCTGGGGTaGCCTAGATGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERVARLG*PRCTAG
Trigger: CCCCGCTGTACATCTAGGCCACCCCAGCCTGGCCAC...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGCTGCGTGGCCAGGCTaGGGTGGCCTAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKAAWPG*GGLDVQ
Trigger: CTGTACATCTAGGCCACCCCAGCCTGGCCACGCAGC...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGTCGCGTTTTCTAGAGTaGGTTTCGTTTCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSSRFLE*VSFPRG
Trigger: ACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGA...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGTCAAGTCTTCGGGGTTaGTGCCATTGGCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLSSLRG*CHWLAG
Trigger: TCCTGCGAGCCAATGGCATCAACCCCGAAGACTTGA...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTGCAGTTCTCCGAGTTTaGGAAGTGGATGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPAAVLRV*EVDEVV
Trigger: GACGACCTCATCCACTTCTCAAACTCGGAGAACTGC...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAACGGCCTCCTGCGCTTaGATCATTCTGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTTASCA*IILMFL
Trigger: CAAAAACATCAGAATGATGCAAGCGCAGGAGGCCGT...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGAGGCTGACCGGGGCATaGGGCGTCTGGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAERLTGA*GVWPSA
Trigger: TGCTGATGGCCAGACGCCGCATGCCCCGGTCAGCCT...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACAGGCTGACCGGGGCATaGGGCGTCTGGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHRLTGA*GVWPSA
Trigger: TGCTGATGGCCAGACGCCGCATGCCCCGGTCAGCCT...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACGGGCGTGGTCTCGATaGAGTCCTGAGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERRAWSR*SPERLT
Trigger: GGTCAGCCTCTCAGGACTGCATCGAGACCACGCCCG...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCAGATCATCTTATACTaGTTCTTGCCTTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSQIILY*FLPSWA
Trigger: GGCCCAGGAAGGCAAGAAGCAGTATAAGATGATCTG...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTGCTGCTCCAGACCATTaGAAACCTGCTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QGHCATLAKGSALTAGCFAAPDH*KPARGA
Trigger: GGCCCCACGAGCAGGTTTGCAATGGTCTGGAGCAGC...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGCTGCTCCAGACCATTaGAAACCTGCTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKAAPDH*KPARGA
Trigger: GGCCCCACGAGCAGGTTTGCAATGGTCTGGAGCAGC...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTTGCTGCTTCCTTGGCTaGTCCAGACCATTGCAAACC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPACCFLG*SRPLQT
Trigger: GGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAGCA...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLAKGSALTAGCFRCGQGGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGTCCTGGGAGCCAGGCTaGCCGTGTCCCTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGSWEPG*PCPCSQ
Trigger: CTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGA...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTAGCCGGGTGGGAGGGTaGCCAGAAGAGACGACGGGA +
Preference number: 4 (lower is better)
Translates to: TLAKGSALTAGCFRCGQGSRVGG*PEETTG
Trigger: TCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCT...ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCCCTCGGGGTCGCATGTaGGTGGATGTGTGTAGATCG +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGPRGRM*VDVCRS
Trigger: CGATCTACACACATCCACGCACATGCGACCCCGAGG...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCATCTTAGCAGCCTTTTaGATCCTCTTGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPILAAF*ILLTRL
Trigger: CAGCCGGGTCAAGAGGATGCAAAAGGCTGCTAAGAT...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000558259.5
ENST00000558402.5
ENST00000561069.5
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCGGGTATGCAGCCGGGTGGGAGGGTGCCCAGAAGAGACGACGGGAGAGGCAGGGCGCTGCTGCTTCCTTaGCTGCTCCAGACCATTGCA +
Preference number: 4 (lower is better)
Translates to: PGMQPGGRVPRRDDGRGRALLLP*LLQTIA
Trigger: TGCAATGGTCTGGAGCAGCCAAGGAAGCAGCAGCGC...CCTGCCTCTCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCTGCATACCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCGTCGATGAGGTCTTCTaGTTCGCAGGGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGVDEVF*FAGPWN
Trigger: GTTCCAGGGCCCTGCGAACCAGAAGACCTCATCGAC...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGTGCTTCTTGCCTTCCTaGGCCCCGGGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQCFLPS*APGVVS
Trigger: CGAGACCACGCCCGGGGCCCAGGAAGGCAAGAAGCA...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCTCCACAGGACAGTCCTaGCCTATTGGTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLSTGQS*PIGGLS
Trigger: GGACAAACCACCAATAGGCCAGGACTGTCCTGTGGA...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCCTCTCAAGCTTCCGGTaGGCCATGGCAGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGLSSFR*AMAVVH
Trigger: GTGAACGACTGCCATGGCCCACCGGAAGCTTGAGAG...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTCCTCCACCGCCTCCTaGCACTCATCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGSSTAS*HSSVST
Trigger: TGTGGACACTGATGAGTGCCAGGAGGCGGTGGAGGA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCCTGCCTTCAGCCTCGTaGCCGTGGGGGTGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCLPSAS*PWGCGP
Trigger: GGGCCCGCACCCCCACGGCCACGAGGCTGAAGGCAG...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGCTGCCTTCAGCCTCGTaGCCGTGGGGGTGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMLPSAS*PWGCGP
Trigger: GGGCCCGCACCCCCACGGCCACGAGGCTGAAGGCAG...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAGCCACGCTGAAGGCCTaGCCGATAGACTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERATLKA*PIDWAM
Trigger: CATCGCCCAGTCTATCGGCCAGGCCTTCAGCGTGGC...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACATCGTTGTACATCTCCTaGGTGTTGATGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GCPAPGAASLGGASSLRTSLYIS*VLMMSL
Trigger: CAGCGACATCATCAACACCCAGGAGATGTACAACGA...TGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGTCCGAGTTTGAGAAGTaGATGAGGTCGTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSSEFEK*MRSSLY
Trigger: GTACAACGACGACCTCATCCACTTCTCAAACTCGGA...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGGTGGCCAGGCTGGGGTaGCCTAGATGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGVARLG*PRCTAG
Trigger: CCCCGCTGTACATCTAGGCCACCCCAGCCTGGCCAC...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCTGCGTGGCCAGGCTaGGGTGGCCTAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: TAPRWPRGLHSRLAALGAAAWPG*GGLDVQ
Trigger: CTGTACATCTAGGCCACCCCAGCCTGGCCACGCAGC...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAGCAGAGGCAGCTGTTTaGGACCATTGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERAEAAV*DHCGGP
Trigger: GGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGC...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGCCACTGCGCCACGCTaGCCAAGGGGTCTGCACTCA +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEATAPR*PRGLHS
Trigger: TGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGGCTAATGAACCGAGCTaGACTAGATCCGACTTGATC +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSANEPS*TRSDLI
Trigger: GATCAAGTCGGATCTAGTCCAGCTCGGTTCATTAGC...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGGTCTCGATGCAGTCCTaGGAGGCTGACCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGVSMQS*EADRGM
Trigger: CATGCCCCGGTCAGCCTCTCAGGACTGCATCGAGAC...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGTCTCGATGCAGTCCTaGGAGGCTGACCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEVSMQS*EADRGM
Trigger: CATGCCCCGGTCAGCCTCTCAGGACTGCATCGAGAC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACTACAGCGGGGTCTCCTaGCCCGTGAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHYSGVS*PVRSLN
Trigger: GTTCAGGCTCCTCACGGGTCAGGAGACCCCGCTGTA...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCGGACTAGATCCGACTTaGTCTACACACATGCCACTA +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPGLDPT*STHMPL
Trigger: TAGTGGCATGTGTGTAGATCAAGTCGGATCTAGTCC...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCAGATCAGAGCGCTGCTaGTTCCTTGGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGRSERC*FLGCSR
Trigger: TCTGGAGCAGCCAAGGAAGCAGCAGCGCTCTGATCT...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTCGGCTGACGGCCTCCTaGGCTTGCATCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: QGHCATLAKGSALTAGCFRLTAS*ACIILM
Trigger: CATCAGAATGATGCAAGCGCAGGAGGCCGTCAGCCG...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAAGACCATTGCAAACCTaGTCGTGGGGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQRPLQT*SWGHFS
Trigger: GCTGAAGTGGCCCCACGAGCAGGTTTGCAATGGTCT...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGTTGTGCTTCTCCAGCTaGAGCTCCTTGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLLCFSS*SSLQFS
Trigger: GGAGAACTGCAAGGAGCTGCAGCTGGAGAAGCACAA...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAGCACTCACGGCTGGCTaGTTTAGGTGCGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERALTAG*FRCGQG
Trigger: ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGC...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCGGGTATGCAGCCGGGTGGGAGGGTGCCCAGAAGAGACGACGGGAGAGGCAGGCTTCCTACGGGTAGCTaGATGCAACACACGGCACTC +
Preference number: 4 (lower is better)
Translates to: PGMQPGGRVPRRDDGRGRLPTGS*MQHTAL
Trigger: GAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG...CCTGCCTCTCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCTGCATACCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCACTTCCGTCAGCGTCTaGGCATCCCCCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGTSVSV*ASPSEF
Trigger: GAATTCTGAGGGGGATGCCCAGACGCTGACGGAAGT...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGGGGGCATGCGGCGTCTaGCCATCAGCACTACAATGT +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWGACGV*PSALQC
Trigger: ACATTGTAGTGCTGATGGCCAGACGCCGCATGCCCC...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGGGGCATGCGGCGTCTaGCCATCAGCACTACAATGT +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKGACGV*PSALQC
Trigger: ACATTGTAGTGCTGATGGCCAGACGCCGCATGCCCC...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACCTGGTCTCACCCTATaGTCCAACATGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERPGLTL*SNMPLP
Trigger: GGGGAGCGGCATGTTGGACCATAGGGTGAGACCAGG...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTGAGGGACAGGACCTaGTCTCACCCTATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGVRDRT*SHPMVQ
Trigger: TTGGACCATAGGGTGAGACCAGGTCCTGTCCCTCAC...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGACAGGGTGTGCACTGTaGGCCAGGTACTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGTGCAL*ARYSSP
Trigger: CGGGGAGGAGTACCTGGCCCACAGTGCACACCCTGT...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCCTGCCTTCAGCCTCGTaGCCGTGGGGGTGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVLPSAS*PWGCGP
Trigger: GGGCCCGCACCCCCACGGCCACGAGGCTGAAGGCAG...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGGCCACGCTGAAGGCCTaGCCGATAGACTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGATLKA*PIDWAM
Trigger: CATCGCCCAGTCTATCGGCCAGGCCTTCAGCGTGGC...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCTCCGAGTTTGAGAAGTaGATGAGGTCGTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: PASVAGLWRRGQVCGPAPSEFEK*MRSSLY
Trigger: GTACAACGACGACCTCATCCACTTCTCAAACTCGGA...GGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAACGCCATTCATCATGTTaGCCAGGATCACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQRHSSC*PGSPWA
Trigger: TGCCCACGGTGATCCTGGCCAACATGATGAATGGCG...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCAGCTTCACCTGTGTCTaGTTCTTCAGGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLSFTCV*FFRPLM
Trigger: CATCAAGGGCCTGAAGAACCAGACACAGGTGAAGCT...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGCTGGTACTTGAGGTCTaGCCGCTTGATAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLLVLEV*PLDKDR
Trigger: ACGGTCCTTATCAAGCGGCCAGACCTCAAGTACCAG...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGGGCATGGTCTTCATGTaGATCTCTCCGACCGAGTTG +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLGMVFM*ISPTEL
Trigger: CAACTCGGTCGGAGAGATCCACATGAAGACCATGCC...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGGCTGCGTGGCCAGGCTaGGGTGGCCTAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGAAWPG*GGLDVQ
Trigger: CTGTACATCTAGGCCACCCCAGCCTGGCCACGCAGC...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCACCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPAPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGAGACAGTCCAGAACGTaGCAAAATACTTGGAACGCT +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSRQSRT*QNTWNA
Trigger: AGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCT...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGAGGCAGCTGTTTaGGACCATTGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEAEAAV*DHCGGP
Trigger: GGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACCCTCACTGGCGCTGGTaGTGCTGGTCATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHPHWRW*CWSCSD
Trigger: GTCTGAGCATGACCAGCATCACCAGCGCCAGTGAGG...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCTCACTGGCGCTGGTaGTGCTGGTCATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGPHWRW*CWSCSD
Trigger: GTCTGAGCATGACCAGCATCACCAGCGCCAGTGAGG...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGCAGTTCTCCGAGTTTaGGAAGTGGATGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGAVLRV*EVDEVV
Trigger: GACGACCTCATCCACTTCTCAAACTCGGAGAACTGC...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCACGGCCTCCTGCGCTTaGATCATTCTGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLTASCA*IILMFL
Trigger: CAAAAACATCAGAATGATGCAAGCGCAGGAGGCCGT...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCAGATCATCTTATACTaGTTCTTGCCTTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLQIILY*FLPSWA
Trigger: GGCCCAGGAAGGCAAGAAGCAGTATAAGATGATCTG...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAAGTGTCCACAGGGTGTaGACTGTGGGCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERSVHRV*TVGQVL
Trigger: GAGTACCTGGCCCACAGTGCACACCCTGTGGACACT...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGAGTGTCCACAGGGTGTaGACTGTGGGCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: TAPRWPRGLHSRLAALGASVHRV*TVGQVL
Trigger: GAGTACCTGGCCCACAGTGCACACCCTGTGGACACT...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTGCTGCTTCCTTGGCTaGTCCAGACCATTGCAAACC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGCCFLG*SRPLQT
Trigger: GGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAGCA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCGGGTATGCAGCCGGGTGGGAGGGTGCCCAGAAGAGACGACGGGAGAGGCAGGTGCTGCTTCCTTGGCTaGTCCAGACCATTGCAAACC +
Preference number: 4 (lower is better)
Translates to: PGMQPGGRVPRRDDGRGRCCFLG*SRPLQT
Trigger: GGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAGCA...CCTGCCTCTCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCTGCATACCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAATGCTGCTTCCTTGGCTaGTCCAGACCATTGCAAACC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQCCFLG*SRPLQT
Trigger: GGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAGCA...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAACCAGCTGCAGCTCCTTaGAGTTCTCCGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQPAAAP*SSPSLR
Trigger: TCTCAAACTCGGAGAACTGCAAGGAGCTGCAGCTGG...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCAGCTGCAGCTCCTTaGAGTTCTCCGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGPAAAP*SSPSLR
Trigger: TCTCAAACTCGGAGAACTGCAAGGAGCTGCAGCTGG...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGAGGATCTCGCCCTTGTaGTTCTCCAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TAPRWPRGLHSRLAALGARISPL*FSSCSS
Trigger: GGAGCTGCAGCTGGAGAAGCACAAGGGCGAGATCCT...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QGHCATLAKGSALTAGCFTHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAGCTGGCTGCTTTAGGTaGGGCCAAGGTCGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERAGCFR*GQGRVF
Trigger: GAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGC...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTCTTCCTACGGGTAGCTaGATGCAACACACGGCACTC +
Preference number: 4 (lower is better)
Translates to: QGHCATLAKGSALTAGCFLPTGS*MQHTAL
Trigger: GAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAGCGCTGCTGCTTCCTTaGCTGCTCCAGACCATTGCA +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERALLLP*LLQTIA
Trigger: TGCAATGGTCTGGAGCAGCCAAGGAAGCAGCAGCGC...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAACTTCCGTCAGCGTCTaGGCATCCCCCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKTSVSV*ASPSEF
Trigger: GAATTCTGAGGGGGATGCCCAGACGCTGACGGAAGT...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAAGGCGTGGTCCATCATaGTTTCCTGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQRRGPS*FPACLH
Trigger: ATGCAGACACGCAGGAAACCATGATGGACCACGCCT...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCAGGCGTGGTCCATCATaGTTTCCTGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGRRGPS*FPACLH
Trigger: ATGCAGACACGCAGGAAACCATGATGGACCACGCCT...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACACCTGGGCCCCGGGCGTaGTCTCGATGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTPGPRA*SRCSPE
Trigger: CTCAGGACTGCATCGAGACCACGCCCGGGGCCCAGG...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCCCTGGGCCCCGGGCGTaGTCTCGATGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCPGPRA*SRCSPE
Trigger: CTCAGGACTGCATCGAGACCACGCCCGGGGCCCAGG...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAATCCACAGGACAGTCCTaGCCTATTGGTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GTPFGEPASVAGLWRRGQSTGQS*PIGGLS
Trigger: GGACAAACCACCAATAGGCCAGGACTGTCCTGTGGA...TTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGTCCACAGGACAGTCCTaGCCTATTGGTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: CSGPLRHAGQGVCTHGWLSTGQS*PIGGLS
Trigger: GGACAAACCACCAATAGGCCAGGACTGTCCTGTGGA...CAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCTCCACAGGACAGTCCTaGCCTATTGGTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGSTGQS*PIGGLS
Trigger: GGACAAACCACCAATAGGCCAGGACTGTCCTGTGGA...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTCCACAGGACAGTCCTaGCCTATTGGTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGSTGQS*PIGGLS
Trigger: GGACAAACCACCAATAGGCCAGGACTGTCCTGTGGA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGGTGAGGGACAGGACCTaGTCTCACCCTATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWVRDRT*SHPMVQ
Trigger: TTGGACCATAGGGTGAGACCAGGTCCTGTCCCTCAC...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCTCGTTGTACATCTCCTaGGTGTTGATGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLSLYIS*VLMMSL
Trigger: CAGCGACATCATCAACACCCAGGAGATGTACAACGA...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAACGCCATTCATCATGTTaGCCAGGATCACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKRHSSC*PGSPWA
Trigger: TGCCCACGGTGATCCTGGCCAACATGATGAATGGCG...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGAGCTTCACCTGTGTCTaGTTCTTCAGGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLSFTCV*FFRPLM
Trigger: CATCAAGGGCCTGAAGAACCAGACACAGGTGAAGCT...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGACGCTGAAGCCCAGCTaGTACTTGAGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAETLKPS*YLRSGR
Trigger: GCGGCCAGACCTCAAGTACCAGCTGGGCTTCAGCGT...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTACGCTGAAGCCCAGCTaGTACTTGAGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: TLAKGSALTAGCFRCGQGTLKPS*YLRSGR
Trigger: GCGGCCAGACCTCAAGTACCAGCTGGGCTTCAGCGT...ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGTGGACTATCTTCTCGTaGGCTGTGGCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: TAPRWPRGLHSRLAALGAWTIFS*AVATTL
Trigger: GAGCGTGGTGGCCACAGCCCACGAGAAGATAGTCCA...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGTCTCTCCGACCGAGTTaGACAGAGCTTGGACTATCT +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLSLRPS*TELGLS
Trigger: AGATAGTCCAAGCTCTGTCCAACTCGGTCGGAGAGA...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGGTGGCCAGGCTGGGGTaGCCTAGATGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWVARLG*PRCTAG
Trigger: CCCCGCTGTACATCTAGGCCACCCCAGCCTGGCCAC...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAATCCTCTGGGTGGAAATaGAGAGGTCCACTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKSSGWK*RGPLPS
Trigger: TGACGGAAGTGGACCTCTTCATTTCCACCCAGAGGA...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTGACTTCGAGACAAGATaGCGTCAGATTACATGGATC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPADFETR*RQITWI
Trigger: GATCCATGTAATCTGACGTCATCTTGTCTCGAAGTC...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTCCTCTGACGGCCTCCTGCGCTTaGATCATTCTGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: WLGCGVGVKSAARLPAPLTASCA*IILMFL
Trigger: CAAAAACATCAGAATGATGCAAGCGCAGGAGGCCGT...CAGAGGAGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGAGGCTGACCGGGGCATaGGGCGTCTGGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LHSRLAALGAAKVAFSRVRLTGA*GVWPSA
Trigger: TGCTGATGGCCAGACGCCGCATGCCCCGGTCAGCCT...CACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGAGGCTGACCGGGGCATaGGGCGTCTGGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLRLTGA*GVWPSA
Trigger: TGCTGATGGCCAGACGCCGCATGCCCCGGTCAGCCT...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACAGTGTCCACAGGGTGTaGACTGTGGGCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHSVHRV*TVGQVL
Trigger: GAGTACCTGGCCCACAGTGCACACCCTGTGGACACT...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAAGACCATTGCAAACCTaGTCGTGGGGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERRPLQT*SWGHFS
Trigger: GCTGAAGTGGCCCCACGAGCAGGTTTGCAATGGTCT...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTAGGATCTCGCCCTTGTaGTTCTCCAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TLAKGSALTAGCFRCGQGRISPL*FSSCSS
Trigger: GGAGCTGCAGCTGGAGAAGCACAAGGGCGAGATCCT...ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERTHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCTCCTGGGAGCCAGGCTaGCCGTGTCCCTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCSWEPG*PCPCSQ
Trigger: CTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGA...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGCTGGCTGCTTTAGGTaGGGCCAAGGTCGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEAGCFR*GQGRVF
Trigger: GAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGGCTGGCCAAGGGGTCTaGACTCACGGCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWAGQGV*THGWLL
Trigger: AAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGC...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTACTGCTCAGGGCCACTaGGCCACGCTGGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVTAQGH*ATLAKG
Trigger: CCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGT...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACCTACGGGTAGCTGCATaGAACACACGGCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHLRVAA*NTRHSS
Trigger: CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGGTCGATGAGGTCTTCTaGTTCGCAGGGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGVDEVF*FAGPWN
Trigger: GTTCCAGGGCCCTGCGAACCAGAAGACCTCATCGAC...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACGGGGCATGCGGCGTCTaGCCATCAGCACTACAATGT +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHGACGV*PSALQC
Trigger: ACATTGTAGTGCTGATGGCCAGACGCCGCATGCCCC...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACATGCTTCTTGCCTTCCTaGGCCCCGGGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTCFLPS*APGVVS
Trigger: CGAGACCACGCCCGGGGCCCAGGAAGGCAAGAAGCA...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCTGCTTCTTGCCTTCCTaGGCCCCGGGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCCFLPS*APGVVS
Trigger: CGAGACCACGCCCGGGGCCCAGGAAGGCAAGAAGCA...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACTCCTCCACCGCCTCCTaGCACTCATCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHSSTAS*HSSVST
Trigger: TGTGGACACTGATGAGTGCCAGGAGGCGGTGGAGGA...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGGCCACGCTGAAGGCCTaGCCGATAGACTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWATLKA*PIDWAM
Trigger: CATCGCCCAGTCTATCGGCCAGGCCTTCAGCGTGGC...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCTGGCCAGGATCACCGTaGGCAGGATGGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCWPGSP*AGWSPS
Trigger: GCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCCA...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACATGGCCAGGATCACCGTaGGCAGGATGGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTWPGSP*AGWSPS
Trigger: GCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCCA...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCAGCTTCACCTGTGTCTaGTTCTTCAGGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGSFTCV*FFRPLM
Trigger: CATCAAGGGCCTGAAGAACCAGACACAGGTGAAGCT...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAACTGGTACTTGAGGTCTaGCCGCTTGATAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKLVLEV*PLDKDR
Trigger: ACGGTCCTTATCAAGCGGCCAGACCTCAAGTACCAG...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGTGGACTATCTTCTCGTaGGCTGTGGCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEWTIFS*AVATTL
Trigger: GAGCGTGGTGGCCACAGCCCACGAGAAGATAGTCCA...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGTCTCTCCGACCGAGTTaGACAGAGCTTGGACTATCT +
Preference number: 4 (lower is better)
Translates to: CSGPLRHAGQGVCTHGWLSLRPS*TELGLS
Trigger: AGATAGTCCAAGCTCTGTCCAACTCGGTCGGAGAGA...CAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTCCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSIPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCAGACAGTCCAGAACGTaGCAAAATACTTGGAACGCT +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLRQSRT*QNTWNA
Trigger: AGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCT...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTAGACAGTCCAGAACGTaGCAAAATACTTGGAACGCT +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPARQSRT*QNTWNA
Trigger: AGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCT...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACTTACAAGTCGTGTCCTaGGAGCCAGGCTGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHLQVVS*EPGCPC
Trigger: ACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAA...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGTTACAAGTCGTGTCCTaGGAGCCAGGCTGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGLQVVS*EPGCPC
Trigger: ACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAA...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGGGGGTCGCATGTGCGTaGATGTGTGTAGATCGATTT +
Preference number: 4 (lower is better)
Translates to: CSGPLRHAGQGVCTHGWLGVACA*MCVDRF
Trigger: AAATCGATCTACACACATCCACGCACATGCGACCCC...CAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTCGCGTTTTCTAGAGTaGGTTTCGTTTCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGSRFLE*VSFPRG
Trigger: ACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGTCTCGATGCAGTCCTaGGAGGCTGACCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCVSMQS*EADRGM
Trigger: CATGCCCCGGTCAGCCTCTCAGGACTGCATCGAGAC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGTCAAGTCTTCGGGGTTaGTGCCATTGGCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAESSLRG*CHWLAG
Trigger: TCCTGCGAGCCAATGGCATCAACCCCGAAGACTTGA...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAGCAGTTCTCCGAGTTTaGGAAGTGGATGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERAVLRV*EVDEVV
Trigger: GACGACCTCATCCACTTCTCAAACTCGGAGAACTGC...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp AGGGGTGACGGCTGCCCTGCCCCGGGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCAAACATTTGTTCTGTaGCTCTCCTTTGATAAAGAC +
Preference number: 4 (lower is better)
Translates to: RGDGCPAPGAASLGGASSQTFVL*LSFDKD
Trigger: GTCTTTATCAAAGGAGAGTCACAGAACAAATGTTTG...CGAACTGGCGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAAGGCTGACCGGGGCATaGGGCGTCTGGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPARLTGA*GVWPSA
Trigger: TGCTGATGGCCAGACGCCGCATGCCCCGGTCAGCCT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCAGATCATCTTATACTaGTTCTTGCCTTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGQIILY*FLPSWA
Trigger: GGCCCAGGAAGGCAAGAAGCAGTATAAGATGATCTG...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGAGACCATTGCAAACCTaGTCGTGGGGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQRPLQT*SWGHFS
Trigger: GCTGAAGTGGCCCCACGAGCAGGTTTGCAATGGTCT...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGATGCTGCTTCCTTGGCTaGTCCAGACCATTGCAAACC +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERCCFLG*SRPLQT
Trigger: GGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAGCA...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAETHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTGGGAGCCAGGCTaGCCGTGTCCCTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVSWEPG*PCPCSQ
Trigger: CTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGA...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGAGCCGGGTGGGAGGGTaGCCAGAAGAGACGACGGGA +
Preference number: 4 (lower is better)
Translates to: LGAAKVAFSRVGFVSSGSSRVGG*PEETTG
Trigger: TCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCT...CGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGACTTCCGTCAGCGTCTaGGCATCCCCCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGTSVSV*ASPSEF
Trigger: GAATTCTGAGGGGGATGCCCAGACGCTGACGGAAGT...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGTGCTTCTTGCCTTCCTaGGCCCCGGGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVCFLPS*APGVVS
Trigger: CGAGACCACGCCCGGGGCCCAGGAAGGCAAGAAGCA...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCCTGGTCTCACCCTATaGTCCAACATGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWPGLTL*SNMPLP
Trigger: GGGGAGCGGCATGTTGGACCATAGGGTGAGACCAGG...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCACAGGGTGTGCACTGTaGGCCAGGTACTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCTGCAL*ARYSSP
Trigger: CGGGGAGGAGTACCTGGCCCACAGTGCACACCCTGT...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTCGTTGTACATCTCCTaGGTGTTGATGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGSLYIS*VLMMSL
Trigger: CAGCGACATCATCAACACCCAGGAGATGTACAACGA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTCCGAGTTTGAGAAGTaGATGAGGTCGTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGSEFEK*MRSSLY
Trigger: GTACAACGACGACCTCATCCACTTCTCAAACTCGGA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACTGGCCAGGATCACCGTaGGCAGGATGGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ARSLPTGSCMQHTALLEYWPGSP*AGWSPS
Trigger: GCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCCA...GTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCGCCATTCATCATGTTaGCCAGGATCACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGRHSSC*PGSPWA
Trigger: TGCCCACGGTGATCCTGGCCAACATGATGAATGGCG...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGCGCCATTCATCATGTTaGCCAGGATCACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQRHSSC*PGSPWA
Trigger: TGCCCACGGTGATCCTGGCCAACATGATGAATGGCG...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTGGCCAGGCTGGGGTaGCCTAGATGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPAVARLG*PRCTAG
Trigger: CCCCGCTGTACATCTAGGCCACCCCAGCCTGGCCAC...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGGCTGCGTGGCCAGGCTaGGGTGGCCTAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLAAWPG*GGLDVQ
Trigger: CTGTACATCTAGGCCACCCCAGCCTGGCCACGCAGC...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCTCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVSVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGCAGAGGCAGCTGTTTaGGACCATTGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCAEAAV*DHCGGP
Trigger: GGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTCGGGAGAGGCAGGTGTaGTCATTAGTCACATTGGAA +
Preference number: 4 (lower is better)
Translates to: QGHCATLAKGSALTAGCFRERQV*SLVTLE
Trigger: TTCCAATGTGACTAATGACCACACCTGCCTCTCCCG...AAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGGCCACTGCGCCACGCTaGCCAAGGGGTCTGCACTCA +
Preference number: 4 (lower is better)
Translates to: LGAAKVAFSRVGFVSSGSATAPR*PRGLHS
Trigger: TGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGC...CGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCGCTAATGAACCGAGCTaGACTAGATCCGACTTGATC +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGANEPS*TRSDLI
Trigger: GATCAAGTCGGATCTAGTCCAGCTCGGTTCATTAGC...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGTCCTCTGGGTGGAAATaGAGAGGTCCACTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGSSGWK*RGPLPS
Trigger: TGACGGAAGTGGACCTCTTCATTTCCACCCAGAGGA...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACTCCTCTGGGTGGAAATaGAGAGGTCCACTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHSSGWK*RGPLPS
Trigger: TGACGGAAGTGGACCTCTTCATTTCCACCCAGAGGA...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGTCCTCTGGGTGGAAATaGAGAGGTCCACTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQSSGWK*RGPLPS
Trigger: TGACGGAAGTGGACCTCTTCATTTCCACCCAGAGGA...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTGTCTCGATGCAGTCCTaGGAGGCTGACCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVVSMQS*EADRGM
Trigger: CATGCCCCGGTCAGCCTCTCAGGACTGCATCGAGAC...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCGTCTCGATGCAGTCCTaGGAGGCTGACCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVVSMQS*EADRGM
Trigger: CATGCCCCGGTCAGCCTCTCAGGACTGCATCGAGAC...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGTTCTCCGAGTTTaGGAAGTGGATGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEAVLRV*EVDEVV
Trigger: GACGACCTCATCCACTTCTCAAACTCGGAGAACTGC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCTACAGCGGGGTCTCCTaGCCCGTGAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVYSGVS*PVRSLN
Trigger: GTTCAGGCTCCTCACGGGTCAGGAGACCCCGCTGTA...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTACAGCGGGGTCTCCTaGCCCGTGAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVYSGVS*PVRSLN
Trigger: GTTCAGGCTCCTCACGGGTCAGGAGACCCCGCTGTA...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGGACTAGATCCGACTTaGTCTACACACATGCCACTA +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKGLDPT*STHMPL
Trigger: TAGTGGCATGTGTGTAGATCAAGTCGGATCTAGTCC...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGGGACTAGATCCGACTTaGTCTACACACATGCCACTA +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWGLDPT*STHMPL
Trigger: TAGTGGCATGTGTGTAGATCAAGTCGGATCTAGTCC...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCACGGGCGTGGTCTCGATaGAGTCCTGAGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPARAWSR*SPERLT
Trigger: GGTCAGCCTCTCAGGACTGCATCGAGACCACGCCCG...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTCGGGCGTGGTCTCGATaGAGTCCTGAGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVRAWSR*SPERLT
Trigger: GGTCAGCCTCTCAGGACTGCATCGAGACCACGCCCG...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGTGCTGCTTCCTTGGCTaGTCCAGACCATTGCAAACC +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGCCFLG*SRPLQT
Trigger: GGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAGCA...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGCCAGCTGCAGCTCCTTaGAGTTCTCCGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQPAAAP*SSPSLR
Trigger: TCTCAAACTCGGAGAACTGCAAGGAGCTGCAGCTGG...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACTTGTGCTTCTCCAGCTaGAGCTCCTTGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHLCFSS*SSLQFS
Trigger: GGAGAACTGCAAGGAGCTGCAGCTGGAGAAGCACAA...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGTTGTGCTTCTCCAGCTaGAGCTCCTTGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGLCFSS*SSLQFS
Trigger: GGAGAACTGCAAGGAGCTGCAGCTGGAGAAGCACAA...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGGCACTCACGGCTGGCTaGTTTAGGTGCGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMALTAG*FRCGQG
Trigger: ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGC...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTGCTGGCCAAGGGGTCTaGACTCACGGCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVAGQGV*THGWLL
Trigger: AAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGC...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCGCTGGCCAAGGGGTCTaGACTCACGGCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVAGQGV*THGWLL
Trigger: AAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGC...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCGGGTATGCAGCCGGGTGGGAGGGTGCCCAGAAGAGACGACGGGAGAGGCAGGGGTTTATTAGTGATATaGGCGAAGTCTTCCTACGGG +
Preference number: 4 (lower is better)
Translates to: PGMQPGGRVPRRDDGRGRGLLVI*AKSSYG
Trigger: CCCGTAGGAAGACTTCGCGCATATCACTAATAAACC...CCTGCCTCTCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCTGCATACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGAGGCGTGGTCCATCATaGTTTCCTGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQRRGPS*FPACLH
Trigger: ATGCAGACACGCAGGAAACCATGATGGACCACGCCT...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACAGGCGTGGTCCATCATaGTTTCCTGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHRRGPS*FPACLH
Trigger: ATGCAGACACGCAGGAAACCATGATGGACCACGCCT...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCCCTGGTCTCACCCTATaGTCCAACATGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCPGLTL*SNMPLP
Trigger: GGGGAGCGGCATGTTGGACCATAGGGTGAGACCAGG...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAACAGGGTGTGCACTGTaGGCCAGGTACTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPATGCAL*ARYSSP
Trigger: CGGGGAGGAGTACCTGGCCCACAGTGCACACCCTGT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGCCACGCTGAAGGCCTaGCCGATAGACTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVATLKA*PIDWAM
Trigger: CATCGCCCAGTCTATCGGCCAGGCCTTCAGCGTGGC...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTGCCACGCTGAAGGCCTaGCCGATAGACTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVATLKA*PIDWAM
Trigger: CATCGCCCAGTCTATCGGCCAGGCCTTCAGCGTGGC...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGTCGTTGTACATCTCCTaGGTGTTGATGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWSLYIS*VLMMSL
Trigger: CAGCGACATCATCAACACCCAGGAGATGTACAACGA...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCTGGTACTTGAGGTCTaGCCGCTTGATAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGLVLEV*PLDKDR
Trigger: ACGGTCCTTATCAAGCGGCCAGACCTCAAGTACCAG...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCACGCTGAAGCCCAGCTaGTACTTGAGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCTLKPS*YLRSGR
Trigger: GCGGCCAGACCTCAAGTACCAGCTGGGCTTCAGCGT...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGACGCTGAAGCCCAGCTaGTACTTGAGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLTLKPS*YLRSGR
Trigger: GCGGCCAGACCTCAAGTACCAGCTGGGCTTCAGCGT...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGGAGTTGGACAGAGCTTaGACTATCTTCTCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TAPRWPRGLHSRLAALGAELDRA*TIFSWA
Trigger: AGCCCACGAGAAGATAGTCCAAGCTCTGTCCAACTC...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGTCTCTCCGACCGAGTTaGACAGAGCTTGGACTATCT +
Preference number: 4 (lower is better)
Translates to: TAPRWPRGLHSRLAALGASLRPS*TELGLS
Trigger: AGATAGTCCAAGCTCTGTCCAACTCGGTCGGAGAGA...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGGCATGGTCTTCATGTaGATCTCTCCGACCGAGTTG +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEGMVFM*ISPTEL
Trigger: CAACTCGGTCGGAGAGATCCACATGAAGACCATGCC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGGGCATGGTCTTCATGTaGATCTCTCCGACCGAGTTG +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQGMVFM*ISPTEL
Trigger: CAACTCGGTCGGAGAGATCCACATGAAGACCATGCC...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGCTGCGTGGCCAGGCTaGGGTGGCCTAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVAAWPG*GGLDVQ
Trigger: CTGTACATCTAGGCCACCCCAGCCTGGCCACGCAGC...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGCAGACACCTGTGGCCAGCGTCCGTGGCTaGGCTGTGGCGTCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RMCVDVCRSILKRGQTPVASVRG*AVASGS
Trigger: TGACCCCGACGCCACAGCCCAGCCACGGACGCTGGC...CACAGGTGTCTGCCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCAGACAGTCCAGAACGTaGCAAAATACTTGGAACGCT +
Preference number: 4 (lower is better)
Translates to: FGEPASVAGLWRRGQVCGRQSRT*QNTWNA
Trigger: AGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCT...GCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACGCAGAGGCAGCTGTTTaGGACCATTGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARSLPTGSCMQHTALLEYAEAAV*DHCGGP
Trigger: GGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGC...GTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp ACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGCTGCTTTAGGTGCGTCGCGTTTTCTAGAGTaGGTTTCGTTTCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TAPRWPRGLHSRLAALGASRFLE*VSFPRG
Trigger: ACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGA...CGCACCTAAAGCAGCCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp TACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCTGGGACTTCGAGACAAGATaGCGTCAGATTACATGGATC +
Preference number: 4 (lower is better)
Translates to: YCSGPLRHAGQGVCTHGWDFETR*RQITWI
Trigger: GATCCATGTAATCTGACGTCATCTTGTCTCGAAGTC...CCAGCCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGAACGGCCTCCTGCGCTTaGATCATTCTGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERTASCA*IILMFL
Trigger: CAAAAACATCAGAATGATGCAAGCGCAGGAGGCCGT...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TGGGTGGTGAGGGCACACCCTTTGGGGAGCCAGCGTCCGTGGCTGGGCTGTGGCTCCATCATGGTTTCCTaGGTGTCTGCATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: WVVRAHPLGSQRPWLGCGSIMVS*VSAFKT
Trigger: GGTTTTAAATGCAGACACGCAGGAAACCATGATGGA...GCCACAGCCCAGCCACGGACGCTGGCTCCCCAAAGGGTGTGCCCTCACCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTAGGCTGACCGGGGCATaGGGCGTCTGGCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSIRLTGA*GVWPSA
Trigger: TGCTGATGGCCAGACGCCGCATGCCCCGGTCAGCCT...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCTCTTATACTGCTTCTTaGCTTCCTGGGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCSYTAS*LPGPRA
Trigger: CGCCCGGGGCCCAGGAAGGCAAGAAGCAGTATAAGA...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTGTCCACAGGGTGTaGACTGTGGGCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCSVHRV*TVGQVL
Trigger: GAGTACCTGGCCCACAGTGCACACCCTGTGGACACT...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGCTGCTCCAGACCATTaGAAACCTGCTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPAAAPDH*KPARGA
Trigger: GGCCCCACGAGCAGGTTTGCAATGGTCTGGAGCAGC...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTCCTGGGAGCCAGGCTaGCCGTGTCCCTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSISWEPG*PCPCSQ
Trigger: CTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGA...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAGCCGGGTGGGAGGGTaGCCAGAAGAGACGACGGGA +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPSRVGG*PEETTG
Trigger: TCCCGTCGTCTCTTCTGGGCACCCTCCCACCCGGCT...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCCACACATGCCACTACTaGTCAGGGCCACTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVHTCHY*SGPLRH
Trigger: GTGGCGCAGTGGCCCTGAGCAGTAGTGGCATGTGTG...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCCTACGGGTAGCTGCATaGAACACACGGCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCLRVAA*NTRHSS
Trigger: CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCACTACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGGGTTTATTAGTGATATaGGCGAAGTCTTCCTACGGG +
Preference number: 4 (lower is better)
Translates to: PLLLRATAPRWPRGLHSRGLLVI*AKSSYG
Trigger: CCCGTAGGAAGACTTCGCGCATATCACTAATAAACC...CCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGATCTTAGCAGCCTTTTaGATCCTCTTGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEILAAF*ILLTRL
Trigger: CAGCCGGGTCAAGAGGATGCAAAAGGCTGCTAAGAT...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000558259.5
ENST00000558402.5
ENST00000561069.5
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGATCTTAGCAGCCTTTTaGATCCTCTTGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGILAAF*ILLTRL
Trigger: CAGCCGGGTCAAGAGGATGCAAAAGGCTGCTAAGAT...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000558259.5
ENST00000558402.5
ENST00000561069.5
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGACTTCCGTCAGCGTCTaGGCATCCCCCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWTSVSV*ASPSEF
Trigger: GAATTCTGAGGGGGATGCCCAGACGCTGACGGAAGT...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACAGGGGCATGCGGCGTCTaGCCATCAGCACTACAATGT +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTGACGV*PSALQC
Trigger: ACATTGTAGTGCTGATGGCCAGACGCCGCATGCCCC...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCCTCTCAAGCTTCCGGTaGGCCATGGCAGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCLSSFR*AMAVVH
Trigger: GTGAACGACTGCCATGGCCCACCGGAAGCTTGAGAG...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCCTGGTCTCACCCTATaGTCCAACATGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGAAKVAFSRVGFVSSGSPGLTL*SNMPLP
Trigger: GGGGAGCGGCATGTTGGACCATAGGGTGAGACCAGG...CGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGGTGAGGGACAGGACCTaGTCTCACCCTATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWVRDRT*SHPMVQ
Trigger: TTGGACCATAGGGTGAGACCAGGTCCTGTCCCTCAC...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGTCCTCCACCGCCTCCTaGCACTCATCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLSSTAS*HSSVST
Trigger: TGTGGACACTGATGAGTGCCAGGAGGCGGTGGAGGA...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCTCCTCCACCGCCTCCTaGCACTCATCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCSSTAS*HSSVST
Trigger: TGTGGACACTGATGAGTGCCAGGAGGCGGTGGAGGA...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAACGCTGAAGCCCAGCTaGTACTTGAGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPATLKPS*YLRSGR
Trigger: GCGGCCAGACCTCAAGTACCAGCTGGGCTTCAGCGT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCTGGACTATCTTCTCGTaGGCTGTGGCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCWTIFS*AVATTL
Trigger: GAGCGTGGTGGCCACAGCCCACGAGAAGATAGTCCA...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGGAGTTGGACAGAGCTTaGACTATCTTCTCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGELDRA*TIFSWA
Trigger: AGCCCACGAGAAGATAGTCCAAGCTCTGTCCAACTC...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGTCTCTCCGACCGAGTTaGACAGAGCTTGGACTATCT +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGSLRPS*TELGLS
Trigger: AGATAGTCCAAGCTCTGTCCAACTCGGTCGGAGAGA...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCGTGGCCAGGCTGGGGTaGCCTAGATGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: EVFLRVAACNTRHSSNTVVARLG*PRCTAG
Trigger: CCCCGCTGTACATCTAGGCCACCCCAGCCTGGCCAC...GACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCCCAGCTACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 4 (lower is better)
Translates to: RPWLGCGVGVKSAARLPATWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...AGCTGGGAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGTACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCTTACAAGTCGTGTCCTaGGAGCCAGGCTGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCLQVVS*EPGCPC
Trigger: ACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAA...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTTACAAGTCGTGTCCTaGGAGCCAGGCTGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMLQVVS*EPGCPC
Trigger: ACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAA...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGTCATCCAGCCTCCTGTaGCCCAGCCTTTCACCAATG +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWSSSLL*PSLSPM
Trigger: CATTGGTGAAAGGCTGGGCCACAGGAGGCTGGATGA...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561069.5
CDS-3UTR CCA 90 bp AGCCAGCGTCCGTGGCTGGGCTGTGGCGTCGGGGTCAAGTCTGCGGCCCGGCTCAAATATTCAGGAGACTaGCTAACACAAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: SQRPWLGCGVGVKSAARLKYSGD*LTQSSS
Trigger: GGATGAACTTTGTGTTAGCCAGTCTCCTGAATATTT...GAGCCGGGCCGCAGACTTGACCCCGACGCCACAGCCCAGCCACGGACGCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561069.5
CDS-3UTR TCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACGCGCTTGCATCATTCTaGTGTTTTTGGAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHALASF*CFWKGS
Trigger: GGAACCCTTCCAAAAACATCAGAATGATGCAAGCGC...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGCGCTTGCATCATTCTaGTGTTTTTGGAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEALASF*CFWKGS
Trigger: GGAACCCTTCCAAAAACATCAGAATGATGCAAGCGC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACATCAAGTCTTCGGGGTTaGTGCCATTGGCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTSSLRG*CHWLAG
Trigger: TCCTGCGAGCCAATGGCATCAACCCCGAAGACTTGA...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACAAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGGGACTAGATCCGACTTaGTCTACACACATGCCACTA +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEGLDPT*STHMPL
Trigger: TAGTGGCATGTGTGTAGATCAAGTCGGATCTAGTCC...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp AGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACGAAAAATCTCCTGGTaGTCAAATCTTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: SRVPRRRQFAPHSFREERRKISW*SNLSRL
Trigger: CAGACGGGAAAGATTTGATCACCAGGAGATTTTTCG...TCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561069.5
ENST00000631894.1
CDS-3UTR GCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGATCAGAGCGCTGCTaGTTCCTTGGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCRSERC*FLGCSR
Trigger: TCTGGAGCAGCCAAGGAAGCAGCAGCGCTCTGATCT...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGAGATCAGAGCGCTGCTaGTTCCTTGGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLRSERC*FLGCSR
Trigger: TCTGGAGCAGCCAAGGAAGCAGCAGCGCTCTGATCT...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACCGGCTGACGGCCTCCTaGGCTTGCATCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: ARSLPTGSCMQHTALLEYRLTAS*ACIILM
Trigger: CATCAGAATGATGCAAGCGCAGGAGGCCGTCAGCCG...GTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCACGGCTGACGGCCTCCTaGGCTTGCATCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPARLTAS*ACIILM
Trigger: CATCAGAATGATGCAAGCGCAGGAGGCCGTCAGCCG...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GATATGCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGCGGCTGACGGCCTCCTaGGCTTGCATCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: DMREVFLRVAACNTRHSSRLTAS*ACIILM
Trigger: CATCAGAATGATGCAAGCGCAGGAGGCCGTCAGCCG...CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGCATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp GGAGCCGCGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAATCCATCATGGTTTCCTaGGTGTCTGCATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: GAASLGGASSLRTASGRKSIMVS*VSAFKT
Trigger: GGTTTTAAATGCAGACACGCAGGAAACCATGATGGA...TTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACGCGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTCGGGCGTGGTCTCGATaGAGTCCTGAGAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPRAWSR*SPERLT
Trigger: GGTCAGCCTCTCAGGACTGCATCGAGACCACGCCCG...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCATCTTATACTGCTTCTTaGCTTCCTGGGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPASYTAS*LPGPRA
Trigger: CGCCCGGGGCCCAGGAAGGCAAGAAGCAGTATAAGA...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGCAGATCATCTTATACTaGTTCTTGCCTTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAEQIILY*FLPSWA
Trigger: GGCCCAGGAAGGCAAGAAGCAGTATAAGATGATCTG...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGAGACCATTGCAAACCTaGTCGTGGGGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMRPLQT*SWGHFS
Trigger: GCTGAAGTGGCCCCACGAGCAGGTTTGCAATGGTCT...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CTGCACTCACGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGAGACCATTGCAAACCTaGTCGTGGGGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: LHSRLAALGAAKVAFSRVRPLQT*SWGHFS
Trigger: GCTGAAGTGGCCCCACGAGCAGGTTTGCAATGGTCT...CACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACAAGACCATTGCAAACCTaGTCGTGGGGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTRPLQT*SWGHFS
Trigger: GCTGAAGTGGCCCCACGAGCAGGTTTGCAATGGTCT...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGTCCTGGGAGCCAGGCTaGCCGTGTCCCTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FPRGRMCVDVCRSILKRGSWEPG*PCPCSQ
Trigger: CTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGA...CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GATATGCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGGCGCTGCTGCTTCCTTaGCTGCTCCAGACCATTGCA +
Preference number: 4 (lower is better)
Translates to: DMREVFLRVAACNTRHSSALLLP*LLQTIA
Trigger: TGCAATGGTCTGGAGCAGCCAAGGAAGCAGCAGCGC...CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGCATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGTCGATGAGGTCTTCTaGTTCGCAGGGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVVDEVF*FAGPWN
Trigger: GTTCCAGGGCCCTGCGAACCAGAAGACCTCATCGAC...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGACTTCCGTCAGCGTCTaGGCATCCCCCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMTSVSV*ASPSEF
Trigger: GAATTCTGAGGGGGATGCCCAGACGCTGACGGAAGT...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGAGGCGTGGTCCATCATaGTTTCCTGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWRRGPS*FPACLH
Trigger: ATGCAGACACGCAGGAAACCATGATGGACCACGCCT...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GATATGCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGGGGGCATGCGGCGTCTaGCCATCAGCACTACAATGT +
Preference number: 4 (lower is better)
Translates to: DMREVFLRVAACNTRHSSGACGV*PSALQC
Trigger: ACATTGTAGTGCTGATGGCCAGACGCCGCATGCCCC...CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGCATATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GATATGCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGCTCTCAAGCTTCCGGTaGGCCATGGCAGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: DMREVFLRVAACNTRHSSLSSFR*AMAVVH
Trigger: GTGAACGACTGCCATGGCCCACCGGAAGCTTGAGAG...CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGCATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCATCCTCCACCGCCTCCTaGCACTCATCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPASSTAS*HSSVST
Trigger: TGTGGACACTGATGAGTGCCAGGAGGCGGTGGAGGA...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGTCGTTGTACATCTCCTaGGTGTTGATGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQSLYIS*VLMMSL
Trigger: CAGCGACATCATCAACACCCAGGAGATGTACAACGA...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp ACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGAGTCCGAGTTTGAGAAGTaGATGAGGTCGTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: TSRVLGARLPVSLQSVAESEFEK*MRSSLY
Trigger: GTACAACGACGACCTCATCCACTTCTCAAACTCGGA...CTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTGGACTATCTTCTCGTaGGCTGTGGCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVWTIFS*AVATTL
Trigger: GAGCGTGGTGGCCACAGCCCACGAGAAGATAGTCCA...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGGGCATGGTCTTCATGTaGATCTCTCCGACCGAGTTG +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWGMVFM*ISPTEL
Trigger: CAACTCGGTCGGAGAGATCCACATGAAGACCATGCC...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCACATGGCGGCGGGCATaGTCTTCATGTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCTWRRA*SSCGSL
Trigger: GAGAGATCCACATGAAGACCATGCCCGCCGCCATGT...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGACATGGCGGCGGGCATaGTCTTCATGTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLTWRRA*SSCGSL
Trigger: GAGAGATCCACATGAAGACCATGCCCGCCGCCATGT...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACAACATGGCGGCGGGCATaGTCTTCATGTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTTWRRA*SSCGSL
Trigger: GAGAGATCCACATGAAGACCATGCCCGCCGCCATGT...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGTCCGTGGCTGGGCTGTaGCGTCGGGGTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: FPRGRMCVDVCRSILKRGSVAGL*RRGQVC
Trigger: GCAGACTTGACCCCGACGCCACAGCCCAGCCACGGA...CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACGCTAATGAACCGAGCTaGACTAGATCCGACTTGATC +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHANEPS*TRSDLI
Trigger: GATCAAGTCGGATCTAGTCCAGCTCGGTTCATTAGC...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAAGCAGTCCTGAGAGGCTaGCCGGGGCATGCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQAVLRG*PGHAAS
Trigger: AGACGCCGCATGCCCCGGTCAGCCTCTCAGGACTGC...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGTCAAGTCTTCGGGGTTaGTGCCATTGGCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVSSLRG*CHWLAG
Trigger: TCCTGCGAGCCAATGGCATCAACCCCGAAGACTTGA...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGCAGTTCTCCGAGTTTaGGAAGTGGATGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCAVLRV*EVDEVV
Trigger: GACGACCTCATCCACTTCTCAAACTCGGAGAACTGC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACAGCAGTTCTCCGAGTTTaGGAAGTGGATGAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTAVLRV*EVDEVV
Trigger: GACGACCTCATCCACTTCTCAAACTCGGAGAACTGC...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCATGAGCCCGGGAAGCTaGATAGCTTCCCGAATAGCG +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVMSPGS*IASRIA
Trigger: CGCTATTCGGGAAGCTATTCAGCTTCCCGGGCTCAT...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558330.5
ENST00000558402.5
CDS-3UTR TCA 90 bp GCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACATGAGCCCGGGAAGCTaGATAGCTTCCCGAATAGCG +
Preference number: 4 (lower is better)
Translates to: ARSLPTGSCMQHTALLEYMSPGS*IASRIA
Trigger: CGCTATTCGGGAAGCTATTCAGCTTCCCGGGCTCAT...GTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558402.5
CDS-3UTR GCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGATCAGAGCGCTGCTaGTTCCTTGGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVRSERC*FLGCSR
Trigger: TCTGGAGCAGCCAAGGAAGCAGCAGCGCTCTGATCT...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAAGACCATTGCAAACCTaGTCGTGGGGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPARPLQT*SWGHFS
Trigger: GCTGAAGTGGCCCCACGAGCAGGTTTGCAATGGTCT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCGCTGCTCCAGACCATTaGAAACCTGCTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: EVFLRVAACNTRHSSNTVAAPDH*KPARGA
Trigger: GGCCCCACGAGCAGGTTTGCAATGGTCTGGAGCAGC...GACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACATGCTGCTTCCTTGGCTaGTCCAGACCATTGCAAACC +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTCCFLG*SRPLQT
Trigger: GGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAGCA...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACACCAGCTGCAGCTCCTTaGAGTTCTCCGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTPAAAP*SSPSLR
Trigger: TCTCAAACTCGGAGAACTGCAAGGAGCTGCAGCTGG...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCCCAGCTGCAGCTCCTTaGAGTTCTCCGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCPAAAP*SSPSLR
Trigger: TCTCAAACTCGGAGAACTGCAAGGAGCTGCAGCTGG...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACATTGTGCTTCTCCAGCTaGAGCTCCTTGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTLCFSS*SSLQFS
Trigger: GGAGAACTGCAAGGAGCTGCAGCTGGAGAAGCACAA...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPATHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCGCACTCACGGCTGGCTaGTTTAGGTGCGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: EVFLRVAACNTRHSSNTVALTAG*FRCGQG
Trigger: ACCTTGGCCGCACCTAAAGCAGCCAGCCGTGAGTGC...GACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCTTCCTACGGGTAGCTaGATGCAACACACGGCACTC +
Preference number: 4 (lower is better)
Translates to: LGAAKVAFSRVGFVSSGSLPTGS*MQHTAL
Trigger: GAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG...CGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGACTTCCGTCAGCGTCTaGGCATCCCCCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: LGAAKVAFSRVGFVSSGSTSVSV*ASPSEF
Trigger: GAATTCTGAGGGGGATGCCCAGACGCTGACGGAAGT...CGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAACTTCCGTCAGCGTCTaGGCATCCCCCTCAGAATTC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPATSVSV*ASPSEF
Trigger: GAATTCTGAGGGGGATGCCCAGACGCTGACGGAAGT...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGGTGAGGGACAGGACCTaGTCTCACCCTATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LGAAKVAFSRVGFVSSGSVRDRT*SHPMVQ
Trigger: TTGGACCATAGGGTGAGACCAGGTCCTGTCCCTCAC...CGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAAAGACAGGGTGTGCACTGTaGGCCAGGTACTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LRVAACNTRHSSNTVILKTGCAL*ARYSSP
Trigger: CGGGGAGGAGTACCTGGCCCACAGTGCACACCCTGT...CTTTAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGACAAGATGACGTCAGATTACATGGATCGCTAATGAACCGAGCTGGACTAGATCTGCCTTCAGCCTCGTaGCCGTGGGGGTGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RQDDVRLHGSLMNRAGLDLPSAS*PWGCGP
Trigger: GGGCCCGCACCCCCACGGCCACGAGGCTGAAGGCAG...ATCTAGTCCAGCTCGGTTCATTAGCGATCCATGTAATCTGACGTCATCTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCCGCCATTCATCATGTTaGCCAGGATCACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVRHSSC*PGSPWA
Trigger: TGCCCACGGTGATCCTGGCCAACATGATGAATGGCG...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTACATGGCGGCGGGCATaGTCTTCATGTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVTWRRA*SSCGSL
Trigger: GAGAGATCCACATGAAGACCATGCCCGCCGCCATGT...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCATACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPAYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCACTACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGCGAAAAATCTCCTGGTaGTCAAATCTTTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PLLLRATAPRWPRGLHSRRKISW*SNLFRI
Trigger: GATTCTGAAAAGATTTGATCACCAGGAGATTTTTCG...CCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp TTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGCCTCACTGGCGCTGGTaGTGCTGGTCATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FPRGRMCVDVCRSILKRGPHWRW*CWSCSD
Trigger: GTCTGAGCATGACCAGCATCACCAGCGCCAGTGAGG...CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGACGGCCTCCTGCGCTTaGATCATTCTGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWTASCA*IILMFL
Trigger: CAAAAACATCAGAATGATGCAAGCGCAGGAGGCCGT...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTCGGCTGACGGCCTCCTaGGCTTGCATCATTCTGATG +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSIRLTAS*ACIILM
Trigger: CATCAGAATGATGCAAGCGCAGGAGGCCGTCAGCCG...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGTCCATCATGGTTTCCTaGGTGTCTGCATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGSIMVS*VSAFKT
Trigger: GGTTTTAAATGCAGACACGCAGGAAACCATGATGGA...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTTCTTATACTGCTTCTTaGCTTCCTGGGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPSYTAS*LPGPRA
Trigger: CGCCCGGGGCCCAGGAAGGCAAGAAGCAGTATAAGA...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGCAGATCATCTTATACTaGTTCTTGCCTTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWQIILY*FLPSWA
Trigger: GGCCCAGGAAGGCAAGAAGCAGTATAAGATGATCTG...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAGTGTCCACAGGGTGTaGACTGTGGGCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPSVHRV*TVGQVL
Trigger: GAGTACCTGGCCCACAGTGCACACCCTGTGGACACT...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGTGCTGCTTCCTTGGCTaGTCCAGACCATTGCAAACC +
Preference number: 4 (lower is better)
Translates to: LGAAKVAFSRVGFVSSGSCCFLG*SRPLQT
Trigger: GGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAGCA...CGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTCCAGCTGCAGCTCCTTaGAGTTCTCCGAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVPAAAP*SSPSLR
Trigger: TCTCAAACTCGGAGAACTGCAAGGAGCTGCAGCTGG...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTTGTGCTTCTCCAGCTaGAGCTCCTTGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVLCFSS*SSLQFS
Trigger: GGAGAACTGCAAGGAGCTGCAGCTGGAGAAGCACAA...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCATTGTGCTTCTCCAGCTaGAGCTCCTTGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPALCFSS*SSLQFS
Trigger: GGAGAACTGCAAGGAGCTGCAGCTGGAGAAGCACAA...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAGGATCTCGCCCTTGTaGTTCTCCAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPRISPL*FSSCSS
Trigger: GGAGCTGCAGCTGGAGAAGCACAAGGGCGAGATCCT...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTCTACGGGTAGCTGCATaGAACACACGGCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPLRVAA*NTRHSS
Trigger: CGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGATCTTAGCAGCCTTTTaGATCCTCTTGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLILAAF*ILLTRL
Trigger: CAGCCGGGTCAAGAGGATGCAAAAGGCTGCTAAGAT...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000558259.5
ENST00000558402.5
ENST00000561069.5
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCTCCACAGGACAGTCCTaGCCTATTGGTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVSTGQS*PIGGLS
Trigger: GGACAAACCACCAATAGGCCAGGACTGTCCTGTGGA...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTCCTCCACCGCCTCCTaGCACTCATCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSISSTAS*HSSVST
Trigger: TGTGGACACTGATGAGTGCCAGGAGGCGGTGGAGGA...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGTCGTTGTACATCTCCTaGGTGTTGATGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWSLYIS*VLMMSL
Trigger: CAGCGACATCATCAACACCCAGGAGATGTACAACGA...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp TCCACACCACGCACAGCTACCGAGACACACCCTGGCTTGTGCAGGGAGAAGACAGAGTTGGACAGAGCTTaGACTATCTTCTCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: STPRTATETHPGLCREKTELDRA*TIFSWA
Trigger: AGCCCACGAGAAGATAGTCCAAGCTCTGTCCAACTC...TGTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTAGCTGTGCGTGGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGTCTCTCCGACCGAGTTaGACAGAGCTTGGACTATCT +
Preference number: 4 (lower is better)
Translates to: PQTFITSRVLGARLPVSLSLRPS*TELGLS
Trigger: AGATAGTCCAAGCTCTGTCCAACTCGGTCGGAGAGA...CAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTGGCATGGTCTTCATGTaGATCTCTCCGACCGAGTTG +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVGMVFM*ISPTEL
Trigger: CAACTCGGTCGGAGAGATCCACATGAAGACCATGCC...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGGCATGGTCTTCATGTaGATCTCTCCGACCGAGTTG +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPAGMVFM*ISPTEL
Trigger: CAACTCGGTCGGAGAGATCCACATGAAGACCATGCC...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCACTACTGCTCAGGGCCACTGCGCCACGCTGGCCAAGGGGTCTGCACTCACGGACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 4 (lower is better)
Translates to: PLLLRATAPRWPRGLHSRTWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...CCGTGAGTGCAGACCCCTTGGCCAGCGTGGCGCAGTGGCCCTGAGCAGTAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGGGGTCGCATGTGCGTaGATGTGTGTAGATCGATTT +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCGVACA*MCVDRF
Trigger: AAATCGATCTACACACATCCACGCACATGCGACCCC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCGCGCTTGCATCATTCTaGTGTTTTTGGAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCALASF*CFWKGS
Trigger: GGAACCCTTCCAAAAACATCAGAATGATGCAAGCGC...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGGCGCTTGCATCATTCTaGTGTTTTTGGAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMALASF*CFWKGS
Trigger: GGAACCCTTCCAAAAACATCAGAATGATGCAAGCGC...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp GAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCAAATCAAGTGGGTGGTaGGGGCACACCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVFLRVAACNTRHSSNTVKSSGW*GHTLWG
Trigger: TCCCCAAAGGGTGTGCCCTCACCACCCACTTGATTT...GACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGCAGACACCTGTGAGTGTCCACAGGGTGTaGACTGTGGGCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: RMCVDVCRSILKRGQTPVSVHRV*TVGQVL
Trigger: GAGTACCTGGCCCACAGTGCACACCCTGTGGACACT...CACAGGTGTCTGCCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTAGACCATTGCAAACCTaGTCGTGGGGCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSIRPLQT*SWGHFS
Trigger: GCTGAAGTGGCCCCACGAGCAGGTTTGCAATGGTCT...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAAAGGTCGATGAGGTCTTCTaGTTCGCAGGGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LRVAACNTRHSSNTVILKVDEVF*FAGPWN
Trigger: GTTCCAGGGCCCTGCGAACCAGAAGACCTCATCGAC...CTTTAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGACGACGGGAGAGGCAGGTGTGGTCATTAGTCACATTGGAAAACCCTAGAGTCTCCTCCACCGCCTCCTaGCACTCATCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RRRERQVWSLVTLENPRVSSTAS*HSSVST
Trigger: TGTGGACACTGATGAGTGCCAGGAGGCGGTGGAGGA...GACTCTAGGGTTTTCCAATGTGACTAATGACCACACCTGCCTCTCCCGTCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GCGCGAAGTCTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGCTTCACCTGTGTCTaGTTCTTCAGGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: ARSLPTGSCMQHTALLEYSFTCV*FFRPLM
Trigger: CATCAAGGGCCTGAAGAACCAGACACAGGTGAAGCT...GTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAGACTTCGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGAGTTGGACAGAGCTTaGACTATCTTCTCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPAELDRA*TIFSWA
Trigger: AGCCCACGAGAAGATAGTCCAAGCTCTGTCCAACTC...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR TCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGCGCTTGCATCATTCTaGTGTTTTTGGAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVALASF*CFWKGS
Trigger: GGAACCCTTCCAAAAACATCAGAATGATGCAAGCGC...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTCCTCTGGGTGGAAATaGAGAGGTCCACTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSISSGWK*RGPLPS
Trigger: TGACGGAAGTGGACCTCTTCATTTCCACCCAGAGGA...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGCGAAAAATCTCCTGGTaGTCAAATCTTTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQRKISW*SNLFRI
Trigger: GATTCTGAAAAGATTTGATCACCAGGAGATTTTTCG...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000612449.2
ENST00000620457.4
CDS-3UTR TCA 90 bp GCCCGTGTCCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCGAAAAATCTCCTGGTaGTCAAATCTTTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: ARVPAVSGRGSCLGPLWGRKISW*SNLFRI
Trigger: GATTCTGAAAAGATTTGATCACCAGGAGATTTTTCG...CCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGGACACGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000612449.2
ENST00000620457.4
CDS-3UTR TCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACCGAAAAATCTCCTGGTaGTCAAATCTTTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHRKISW*SNLFRI
Trigger: GATTCTGAAAAGATTTGATCACCAGGAGATTTTTCG...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000612449.2
ENST00000620457.4
CDS-3UTR TCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAACCTCACTGGCGCTGGTaGTGCTGGTCATGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQPHWRW*CWSCSD
Trigger: GTCTGAGCATGACCAGCATCACCAGCGCCAGTGAGG...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGACGGCCTCCTGCGCTTaGATCATTCTGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVTASCA*IILMFL
Trigger: CAAAAACATCAGAATGATGCAAGCGCAGGAGGCCGT...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTACGGCCTCCTGCGCTTaGATCATTCTGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVTASCA*IILMFL
Trigger: CAAAAACATCAGAATGATGCAAGCGCAGGAGGCCGT...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGTGGTCCATCATGGTTTCCTaGGTGTCTGCATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: SLQVVSWEPGCPCPCSQWSIMVS*VSAFKT
Trigger: GGTTTTAAATGCAGACACGCAGGAAACCATGATGGA...CCACTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CGGCTGGCTGCTTTAGGTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTCAGATCATCTTATACTaGTTCTTGCCTTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLAALGAAKVAFSRVGFVQIILY*FLPSWA
Trigger: GGCCCAGGAAGGCAAGAAGCAGTATAAGATGATCTG...AACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCACCTAAAGCAGCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp ACGTGGCAAAATACTTGGAACGCTTTACAAACAAACATTTGTTCTGTGACTCTCGCCCGGTGTCCTGGCTaGGTGGCCAGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TWQNTWNALQTNICSVTLARCPG*VARLGW
Trigger: CCACCCCAGCCTGGCCACGCAGCCAGGACACCGGGC...GAGAGTCACAGAACAAATGTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp AGACAAGATGACGTCAGATTACATGGATCGCTAATGAACCGAGCTGGACTAGATTCCTGGGAGCCAGGCTaGCCGTGTCCCTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RQDDVRLHGSLMNRAGLDSWEPG*PCPCSQ
Trigger: CTGACTGCAGGGACACGGGCAGCCTGGCTCCCAGGA...ATCTAGTCCAGCTCGGTTCATTAGCGATCCATGTAATCTGACGTCATCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTAGGCGTGGTCCATCATaGTTTCCTGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSIRRGPS*FPACLH
Trigger: ATGCAGACACGCAGGAAACCATGATGGACCACGCCT...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCATCCGAGTTTGAGAAGTaGATGAGGTCGTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPASEFEK*MRSSLY
Trigger: GTACAACGACGACCTCATCCACTTCTCAAACTCGGA...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGCAGACACCTGTGACATGGCGGCGGGCATaGTCTTCATGTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: RMCVDVCRSILKRGQTPVTWRRA*SSCGSL
Trigger: GAGAGATCCACATGAAGACCATGCCCGCCGCCATGT...CACAGGTGTCTGCCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGACATGGCGGCGGGCATaGTCTTCATGTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: FPRGRMCVDVCRSILKRGTWRRA*SSCGSL
Trigger: GAGAGATCCACATGAAGACCATGCCCGCCGCCATGT...CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp ACGTGGCAAAATACTTGGAACGCTTTACAAACAAACATTTGTTCTGTGACTCTCCCCTGCCCGGTGTCCTaGCTGCGTGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TWQNTWNALQTNICSVTLPCPVS*LRGQAG
Trigger: CCCAGCCTGGCCACGCAGCCAGGACACCGGGCAGGG...GAGAGTCACAGAACAAATGTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp GTGGCAAAATACTTGGAACGCTTTACAAACAAACATTTGTTCTGTGACTCTCCTGGGAGCCAGCGTCCGTaGCTGGGCTGTGGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: VAKYLERFTNKHLFCDSPGSQRP*LGCGVG
Trigger: CCCGACGCCACAGCCCAGCCACGGACGCTGGCTCCC...AGGAGAGTCACAGAACAAATGTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGTCCCTCGGAGGCGCCAGTTCGCTCCGCACAGCTTCAGGGAGGAAAGACACACACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 4 (lower is better)
Translates to: RPSEAPVRSAQLQGGKTHTWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...GTGTGTCTTTCCTCCCTGAAGCTGTGCGGAGCGAACTGGCGCCTCCGAGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CCCTGCAGTCAGTGGCAGAGGCAGCTGTTTGGGACCATTGTGGGGGCCCCACAGACGTGGCAAAATACTTaGAACGCTTTACAAACAAAC +
Preference number: 4 (lower is better)
Translates to: PCSQWQRQLFGTIVGAPQTWQNT*NALQTN
Trigger: GTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT...CTGTGGGGCCCCCACAATGGTCCCAAACAGCTGCCTCTGCCACTGACTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGCAGACACCTGTGTACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: RMCVDVCRSILKRGQTPVYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...CACAGGTGTCTGCCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGTACCGAGACACACCCTaGCTTGTGCAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FPRGRMCVDVCRSILKRGYRDTP*LVQGED
Trigger: GTCTTCTCCCTGCACAAGCCAGGGTGTGTCTCGGTA...CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp CGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGCAGACACCTGTGTCCTCTGGGTGGAAATaGAGAGGTCCACTTCCGTCA +
Preference number: 4 (lower is better)
Translates to: RMCVDVCRSILKRGQTPVSSGWK*RGPLPS
Trigger: TGACGGAAGTGGACCTCTTCATTTCCACCCAGAGGA...CACAGGTGTCTGCCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGACTTCGAGACAAGATaGCGTCAGATTACATGGATC +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVDFETR*RQITWI
Trigger: GATCCATGTAATCTGACGTCATCTTGTCTCGAAGTC...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCTCCATCATGGTTTCCTaGGTGTCTGCATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCSIMVS*VSAFKT
Trigger: GGTTTTAAATGCAGACACGCAGGAAACCATGATGGA...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp GTGCGGCCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTCCATCATGGTTTCCTaGGTGTCTGCATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: VRPRSRFLEWVSFPRGRMSIMVS*VSAFKT
Trigger: GGTTTTAAATGCAGACACGCAGGAAACCATGATGGA...CATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGGCCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAATCTTATACTGCTTCTTaGCTTCCTGGGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQSYTAS*LPGPRA
Trigger: CGCCCGGGGCCCAGGAAGGCAAGAAGCAGTATAAGA...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CCAAGGTCGCGTTTTCTAGAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGGTTTATTAGTGATATaGGCGAAGTCTTCCTACGGG +
Preference number: 4 (lower is better)
Translates to: PRSRFLEWVSFPRGRMCVGLLVI*AKSSYG
Trigger: CCCGTAGGAAGACTTCGCGCATATCACTAATAAACC...CACGCACATGCGACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGACCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTATCTTAGCAGCCTTTTaGATCCTCTTGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPILAAF*ILLTRL
Trigger: CAGCCGGGTCAAGAGGATGCAAAAGGCTGCTAAGAT...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTTAAAGAGGGGGCTGGTACTTGAGGTCTaGCCGCTTGATAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: FPRGRMCVDVCRSILKRGLVLEV*PLDKDR
Trigger: ACGGTCCTTATCAAGCGGCCAGACCTCAAGTACCAG...CCCCCTCTTTAAAATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCAGACAGTCCAGAACGTaGCAAAATACTTGGAACGCT +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVRQSRT*QNTWNA
Trigger: AGCGTTCCAAGTATTTTGCCACGTTCTGGACTGTCT...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR CCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTCGGGAGAGGCAGGTGTaGTCATTAGTCACATTGGAA +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPRERQV*SLVTLE
Trigger: TTCCAATGTGACTAATGACCACACCTGCCTCTCCCG...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp AACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCAGTCTCCATCATGGTTTCCTaGGTGTCTGCATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: NFHYKSCPGSQAARVPAVSIMVS*VSAFKT
Trigger: GGTTTTAAATGCAGACACGCAGGAAACCATGATGGA...GACTGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCATCCATCATGGTTTCCTaGGTGTCTGCATTTAAAACC +
Preference number: 4 (lower is better)
Translates to: PNFHYKSCPGSQAARVPASIMVS*VSAFKT
Trigger: GGTTTTAAATGCAGACACGCAGGAAACCATGATGGA...TGCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTCAGATCATCTTATACTaGTTCTTGCCTTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPQIILY*FLPSWA
Trigger: GGCCCAGGAAGGCAAGAAGCAGTATAAGATGATCTG...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR GCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAAACACACCCTGGCTTGTaGAGGGAGAAGACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQTHPGL*REKTVQ
Trigger: CTGGACTGTCTTCTCCCTGCACAAGCCAGGGTGTGT...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTTCGTTGTACATCTCCTaGGTGTTGATGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSISLYIS*VLMMSL
Trigger: CAGCGACATCATCAACACCCAGGAGATGTACAACGA...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAAAGAGCTTCACCTGTGTCTaGTTCTTCAGGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LRVAACNTRHSSNTVILKSFTCV*FFRPLM
Trigger: CATCAAGGGCCTGAAGAACCAGACACAGGTGAAGCT...CTTTAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGACGACGGGAGAGGCAGGTGTGGTCATTAGTCACATTGGAAAACCCTAGAGTCTCTCTCCGACCGAGTTaGACAGAGCTTGGACTATCT +
Preference number: 4 (lower is better)
Translates to: RRRERQVWSLVTLENPRVSLRPS*TELGLS
Trigger: AGATAGTCCAAGCTCTGTCCAACTCGGTCGGAGAGA...GACTCTAGGGTTTTCCAATGTGACTAATGACCACACCTGCCTCTCCCGTCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGACGACGGGAGAGGCAGGTGTGGTCATTAGTCACATTGGAAAACCCTAGAGTCCGGGAGAGGCAGGTGTaGTCATTAGTCACATTGGAA +
Preference number: 4 (lower is better)
Translates to: RRRERQVWSLVTLENPRVRERQV*SLVTLE
Trigger: TTCCAATGTGACTAATGACCACACCTGCCTCTCCCG...GACTCTAGGGTTTTCCAATGTGACTAATGACCACACCTGCCTCTCCCGTCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGACGACGGGAGAGGCAGGTGTGGTCATTAGTCACATTGGAAAACCCTAGAGTCTCGCGTTTTCTAGAGTaGGTTTCGTTTCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RRRERQVWSLVTLENPRVSRFLE*VSFPRG
Trigger: ACCCCGAGGAAACGAAACCCACTCTAGAAAACGCGA...GACTCTAGGGTTTTCCAATGTGACTAATGACCACACCTGCCTCTCCCGTCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp GAGTGGGTTTCGTTTCCTCGGGGTCGCATGTGCGTGGATGTGTGTAGATCGATTGCTAATGAACCGAGCTaGACTAGATCCGACTTGATC +
Preference number: 4 (lower is better)
Translates to: EWVSFPRGRMCVDVCRSIANEPS*TRSDLI
Trigger: GATCAAGTCGGATCTAGTCCAGCTCGGTTCATTAGC...AATCGATCTACACACATCCACGCACATGCGACCCCGAGGAAACGAAACCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR TCA 90 bp CCCAAACTTTCATTACAAGTCGTGTCCTGGGAGCCAGGCTGCCCGTGTCCCTGCCGAAAAATCTCCTGGTaGTCAAATCTTTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PKLSLQVVSWEPGCPCPCRKISW*SNLFRI
Trigger: GATTCTGAAAAGATTTGATCACCAGGAGATTTTTCG...GCAGGGACACGGGCAGCCTGGCTCCCAGGACACGACTTGTAATGAAAGTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000612449.2
ENST00000620457.4
CDS-3UTR GCA 90 bp ACGTGGCAAAATACTTGGAACGCTTTACAAACAAACATTTGTTCTGTGACTCTCGGCTGCCCGTGTCCCTaGAGTCAGTGGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TWQNTWNALQTNICSVTLGCPCP*SQWQRQ
Trigger: CTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCC...GAGAGTCACAGAACAAATGTTTGTTTGTAAAGCGTTCCAAGTATTTTGCCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558330.5
ENST00000558402.5
ENST00000561069.5
ENST00000612449.2
ENST00000620457.4
ENST00000631894.1
CDS-3UTR GCA 90 bp CTTCCTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTGGTTTATTAGTGATATaGGCGAAGTCTTCCTACGGG +
Preference number: 4 (lower is better)
Translates to: LPTGSCMQHTALLEYSHPGLLVI*AKSSYG
Trigger: CCCGTAGGAAGACTTCGCGCATATCACTAATAAACC...AGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAAAGGCGTGGTCCATCATaGTTTCCTGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQRRGPS*FPACLH
Trigger: ATGCAGACACGCAGGAAACCATGATGGACCACGCCT...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp TACTGCGTGGTAAGGCTTCTTAAGTCACAGTGTATTCTTCAAGGCCTGGGCCAATCCACAGGACAGTCCTaGCCTATTGGTGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: YCVVRLLKSQCILQGLGQSTGQS*PIGGLS
Trigger: GGACAAACCACCAATAGGCCAGGACTGTCCTGTGGA...TTGGCCCAGGCCTTGAAGAATACACTGTGACTTAAGAAGCCTTACCACGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp AGACAAGATGACGTCAGATTACATGGATCGCTAATGAACCGAGCTGGACTAGATTCCTCCACCGCCTCCTaGCACTCATCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RQDDVRLHGSLMNRAGLDSSTAS*HSSVST
Trigger: TGTGGACACTGATGAGTGCCAGGAGGCGGTGGAGGA...ATCTAGTCCAGCTCGGTTCATTAGCGATCCATGTAATCTGACGTCATCTTGTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp CTACGGGTAGCTGCATGCAACACACGGCACTCCTCGAATACAGTCATCCTAAAGTCGTTGTACATCTCCTaGGTGTTGATGATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LRVAACNTRHSSNTVILKSLYIS*VLMMSL
Trigger: CAGCGACATCATCAACACCCAGGAGATGTACAACGA...CTTTAGGATGACTGTATTCGAGGAGTGCCGTGTGTTGCATGCAGCTACCCGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411764.5
ENST00000558259.5
ENST00000558402.5
ENST00000620457.4
CDS-3UTR CCA 90 bp