RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APBA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107282

Ensembl transcript IDs: ENST00000265381.7, ENST00000470082.2, ENST00000617471.3, ENST00000620509.2, ENST00000627382.1, ENST00000628769.1

Found 766 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTaGCCTCACAGCGTTTGGGAAGGCTGCCCTGTACATAGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: AEPPAHPGGAATAAL*PHSVWEGCPVHSLP
Trigger: GGGAAGGCTATGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 90 bp ATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTaGCCAGACTGTCAAGGAAGTACATTCAGTGGGTGTGCGGTGTCC +
Preference number: 1 (lower is better)
Translates to: MTVATGRRREGGRDQ*PDCQGSTFSGCAVS
Trigger: GGACACCGCACACCCACTGAATGTACTTCCTTGACAGTCTGGTCACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp AGTCCAGGAGGAGGATGCTTTAAGCCAAAGTGGTGCTGGAGGGGCTaGGCCTCAGCGCAGAGAGGGCAGGTCTCTCAGGATGAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: SPGGGCFKPKWCWRG*ASAQRGQVSQDEAE
Trigger: CTCAGCCTCATCCTGAGAGACCTGCCCTCTCTGCGCTGAGGCCCAGCCCCTCCAGCACCACTTTGGCTTAAAGCATCCTCCTCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATaGTTTTCATCTGTGTGCGGGAGGTGTTGGTGCCCACAGGGTGAG +
Preference number: 1 (lower is better)
Translates to: TATPLGRGTREGLCR*FSSVCGRCWCPQGE
Trigger: CTCACCCTGTGGGCACCAACACCTCCCGCACACAGATGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp TGGCTCCCTGAAATGCTCACACTGGAGAAAAGGCAGGATGGGTTCTaGTGCCTCTGCCTGGACCAGGAGGGGGAGGTGAACGTGGGAGTC +
Preference number: 1 (lower is better)
Translates to: WLPEMLTLEKRQDGF*CLCLDQEGEVNVGV
Trigger: GACTCCCACGTTCACCTCCCCCTCCTGGTCCAGGCAGAGGCACCAGAACCCATCCTGCCTTTTCTCCAGTGTGAGCATTTCAGGGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp ACCCAGAAAGCCCTCCAGGATGGTCCTGGGTCAGTACCAGGTGGGTaGTGGCTGCTCTCCATCCTCAAGGGAGTGCATACGAAACTTCCC +
Preference number: 1 (lower is better)
Translates to: TQKALQDGPGSVPGG*WLLSILKGVHTKLP
Trigger: GGGAAGTTTCGTATGCACTCCCTTGAGGATGGAGAGCAGCCAGCACCCACCTGGTACTGACCCAGGACCATCCTGGAGGGCTTTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp CGAGGGAAGGTGTCGCTGGAGAAGTGGGCTCCAGGCATTGGTCTTTaGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCC +
Preference number: 1 (lower is better)
Translates to: RGKVSLEKWAPGIGL*GFLPLMNPRLMVAP
Trigger: GGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATGCCTGGAGCCCACTTCTCCAGCGACACCTTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp ACACACCCAGAAAGCCCTCCAGGATGGTCCTGGGTCAGTACCAGGTaGGTGCTGGCTGCTCTCCATCCTCAAGGGAGTGCATACGAAACT +
Preference number: 1 (lower is better)
Translates to: THPESPPGWSWVSTR*VLAALHPQGSAYET
Trigger: AGTTTCGTATGCACTCCCTTGAGGATGGAGAGCAGCCAGCACCCACCTGGTACTGACCCAGGACCATCCTGGAGGGCTTTCTGGGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp CACTCCCTTGCCCCAGTGGTAGTGGGAAAAAGAACCCACTTCAGCTaGGTGGACCTGTACCGAGCTCCAGCAACTTCCACTCACTGGGTG +
Preference number: 1 (lower is better)
Translates to: HSLAPVVVGKRTHFS*VDLYRAPATSTHWV
Trigger: CACCCAGTGAGTGGAAGTTGCTGGAGCTCGGTACAGGTCCACCCAGCTGAAGTGGGTTCTTTTTCCCACTACCACTGGGGCAAGGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp CACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCCCTCACAGCGTTTaGGAAGGCTGCCCTGTACATAGCCTTCCCATTACATGGGGTATT +
Preference number: 1 (lower is better)
Translates to: HPGGAATAALCPHSV*EGCPVHSLPITWGI
Trigger: AATACCCCATGTAATGGGAAGGCTATGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCACAGAGCTGCTGTGGCTGCTCCACCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp GCTCTGGCGAGGGAAGGTGTCGCTGGAGAAGTGGGCTCCAGGCATTaGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGT +
Preference number: 1 (lower is better)
Translates to: ALAREGVAGEVGSRH*SLGVSSSHEPKADG
Trigger: ACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATGCCTGGAGCCCACTTCTCCAGCGACACCTTCCCTCGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp CCAAATGCTGGGCGCGAGAGGGGAAAGTCTCAGTGGACACAGGGATaGAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCA +
Preference number: 1 (lower is better)
Translates to: PNAGRERGKSQWTQG*STRNTTTKRRVLHA
Trigger: TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTTCCCCTCTCGCGCCCAGCATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp AAGCCCTCCAGGATGGTCCTGGGTCAGTACCAGGTGGGTGCTGGCTaGTCTCCATCCTCAAGGGAGTGCATACGAAACTTCCCTGGTATT +
Preference number: 1 (lower is better)
Translates to: KPSRMVLGQYQVGAG*SPSSRECIRNFPGI
Trigger: AATACCAGGGAAGTTTCGTATGCACTCCCTTGAGGATGGAGAGCAGCCAGCACCCACCTGGTACTGACCCAGGACCATCCTGGAGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp GTCTTGCCTTGGGCCAGAAAACAAGACGCAATTGCACCTGCAGCTTaGCTTCTTGGGAACAGTCCCTCCTTCCCAGACTCCTGGGATGTG +
Preference number: 1 (lower is better)
Translates to: VLPWARKQDAIAPAA*LLGNSPSFPDSWDV
Trigger: CACATCCCAGGAGTCTGGGAAGGAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp TTGGGCCAGAAAACAAGACGCAATTGCACCTGCAGCTTGCCTTCTTaGGAACAGTCCCTCCTTCCCAGACTCCTGGGATGTGTGTTCGGC +
Preference number: 1 (lower is better)
Translates to: LGQKTRRNCTCSLPS*EQSLLPRLLGCVFG
Trigger: GCCGAACACACATCCCAGGAGTCTGGGAAGGAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 90 bp TGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTaGAATGCTCACACTGGAGAAAAGGCAGGATGGGTTCTGGTGCCT +
Preference number: 1 (lower is better)
Translates to: WGFLPLMNPRLMVAP*NAHTGEKAGWVLVP
Trigger: AGGCACCAGAACCCATCCTGCCTTTTCTCCAGTGTGAGCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp AAAGTTGGTCTTGCCTTGGGCCAGAAAACAAGACGCAATTGCACCTaGAGCTTGCCTTCTTGGGAACAGTCCCTCCTTCCCAGACTCCTG +
Preference number: 1 (lower is better)
Translates to: KVGLALGQKTRRNCT*SLPSWEQSLLPRLL
Trigger: CAGGAGTCTGGGAAGGAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp TATCACATCCGCCTAGTGGCCCTGAGCAGAGAAGAAAGTTGGTCTTaGCTTGGGCCAGAAAACAAGACGCAATTGCACCTGCAGCTTGCC +
Preference number: 1 (lower is better)
Translates to: YHIRLVALSREESWS*LGPENKTQLHLQLA
Trigger: GGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCTCTGCTCAGGGCCACTAGGCGGATGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp TCCTGTGTAAAACCAAATGCTGGGCGCGAGAGGGGAAAGTCTCAGTaGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGA +
Preference number: 1 (lower is better)
Translates to: SCVKPNAGRERGKSQ*TQGCSTRNTTTKRR
Trigger: TCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTTCCCCTCTCGCGCCCAGCATTTGGTTTTACACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp TGGGTTTCCAGGGGATCTGTGTGCCTAATCTTCAGCTTGTCTCACTaGTGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTG +
Preference number: 1 (lower is better)
Translates to: WVSRGSVCLIFSLSH*WWEQGRVICKWDCV
Trigger: CACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCACCAGTGAGACAAGCTGAAGATTAGGCACACAGATCCCCTGGAAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp CATCCGCCTAGTGGCCCTGAGCAGAGAAGAAAGTTGGTCTTGCCTTaGGCCAGAAAACAAGACGCAATTGCACCTGCAGCTTGCCTTCTT +
Preference number: 1 (lower is better)
Translates to: HPPSGPEQRRKLVLP*ARKQDAIAPAACLL
Trigger: AAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCTCTGCTCAGGGCCACTAGGCGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp GAGAAGAAAGTTGGTCTTGCCTTGGGCCAGAAAACAAGACGCAATTaGACCTGCAGCTTGCCTTCTTGGGAACAGTCCCTCCTTCCCAGA +
Preference number: 1 (lower is better)
Translates to: EKKVGLALGQKTRRN*TCSLPSWEQSLLPR
Trigger: TCTGGGAAGGAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp ATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTaGGCTGGCCCTGGGTACTACCACATTCCCACAGATAAACTCAGA +
Preference number: 1 (lower is better)
Translates to: MVPQLHGRQCITLMT*AGPGYYHIPTDKLR
Trigger: TCTGAGTTTATCTGTGGGAATGTGGTAGTACCCAGGGCCAGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp GTTTCCAGGGGATCTGTGTGCCTAATCTTCAGCTTGTCTCACTGGTaGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: VSRGSVCLIFSLSHW*WEQGRVICKWDCVC
Trigger: ACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCACCAGTGAGACAAGCTGAAGATTAGGCACACAGATCCCCTGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp GGGAGGGAGGGACCAGTGACCAGACTGTCAAGGAAGTACATTCAGTaGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTT +
Preference number: 1 (lower is better)
Translates to: GREGPVTRLSRKYIQ*VCGVHIPGSRVDIF
Trigger: AAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCACTGAATGTACTTCCTTGACAGTCTGGTCACTGGTCCCTCCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp CACTGTATCACCAGATACTCTACAGCAAATGGAGAACCCTGGCCATaGTTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGG +
Preference number: 1 (lower is better)
Translates to: HCITRYSTANGEPWP*FLPGPHVCDGLTLR
Trigger: CCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAACCATGGCCAGGGTTCTCCATTTGCTGTAGAGTATCTGGTGATACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 90 bp AAATGGAGAACCCTGGCCATGGTTCCTTCCTGGTCCTCACGTTTGTaGTGGGTTGACCTTGAGGCTGGTCTCCCAGAAACATTCTGTAAA +
Preference number: 1 (lower is better)
Translates to: KWRTLAMVPSWSSRL*WVDLEAGLPETFCK
Trigger: TTTACAGAATGTTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAACCATGGCCAGGGTTCTCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 90 bp TGGGTGGACCTGTACCGAGCTCCAGCAACTTCCACTCACTGGGTGTaGAGACACACCTGGATTAACACAAAAGAATGTGGCAGAGAAATC +
Preference number: 1 (lower is better)
Translates to: WVDLYRAPATSTHWV*RHTWINTKECGREI
Trigger: GATTTCTCTGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTGCTGGAGCTCGGTACAGGTCCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp TCCTCACACACTGCCTTGATGGAGGGGAAGAAAGATCGAGTTGTGTaGTCAAGTCAACCTAGGCCAGGGAAGGAGACACATGAAACTCAA +
Preference number: 1 (lower is better)
Translates to: SSHTALMEGKKDRVV*SSQPRPGKETHETQ
Trigger: TTGAGTTTCATGTGTCTCCTTCCCTGGCCTAGGTTGACTTGAGCACACAACTCGATCTTTCTTCCCCTCCATCAAGGCAGTGTGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 90 bp AACACAGTGAAACTGAGAGTGCCACTGCTCGTTCCTGTCAAGCACTaGGCTTCCCTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGAT +
Preference number: 1 (lower is better)
Translates to: NTVKLRVPLLVPVKH*ASLILSRKLRRCRD
Trigger: ATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAGGGAAGCTCAGTGCTTGACAGGAACGAGCAGTGGCACTCTCAGTTTCACTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp GAGGGACCAGTGACCAGACTGTCAAGGAAGTACATTCAGTGGGTGTaGGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTA +
Preference number: 1 (lower is better)
Translates to: EGPVTRLSRKYIQWV*GVHIPGSRVDIFYL
Trigger: TAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCACTGAATGTACTTCCTTGACAGTCTGGTCACTGGTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp CTAAGTATGTACAAGAAATGTCATTCCCACACAGTCCTCACACACTaGCTTGATGGAGGGGAAGAAAGATCGAGTTGTGTGCTCAAGTCA +
Preference number: 1 (lower is better)
Translates to: LSMYKKCHSHTVLTH*LDGGEERSSCVLKS
Trigger: TGACTTGAGCACACAACTCGATCTTTCTTCCCCTCCATCAAGGCAGTGTGTGAGGACTGTGTGGGAATGACATTTCTTGTACATACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp ACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACAGAACTCTCTaGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTTTGCTC +
Preference number: 1 (lower is better)
Translates to: TQKMQRSRGIDHRTL*LKSLVPNLVIVTLL
Trigger: GAGCAAAGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 90 bp GAAATACCACCAGTAACACTTCATTCCTGTTCTATCCACTCTTATTaGCAGAGGAAAGATGAACTGGCTGATGACTCTTTAGTGTCTCAC +
Preference number: 1 (lower is better)
Translates to: EIPPVTLHSCSIHSY*QRKDELADDSLVSH
Trigger: GTGAGACACTAAAGAGTCATCAGCCAGTTCATCTTTCCTCTGCCAATAAGAGTGGATAGAACAGGAATGAAGTGTTACTGGTGGTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 90 bp AATCTTCTCACTCTAATGTTACAATGTCAGTCCTCTAGGAGAGCTTaGAGAATTGGCTTTTTCAGCACCTCTCAAAGTTTACAAGGTTTT +
Preference number: 1 (lower is better)
Translates to: NLLTLMLQCQSSRRA*RIGFFSTSQSLQGF
Trigger: AAAACCTTGTAAACTTTGAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTCCTAGAGGACTGACATTGTAACATTAGAGTGAGAAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTCCATCCCAGAGCCCCTaGCCCCACCGGGTGCCACTC +
Preference number: 2 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCPSQSP*PHRVPL
Trigger: GAGTGGCACCCGGTGGGGCCAGGGGCTCTGGGATGG...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCCCTGGCCCCACCGGGTaGCACTCTCTGCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: PKAEPPAHPGGAATAALCPGPTG*HSLQQQ
Trigger: CTGCTGCTGCAGAGAGTGGCACCCGGTGGGGCCAGG...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGAGGAGAGTCCTCCATaGATGCCACCGCGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCEESPP*MPPRVA
Trigger: GGCCACACGCGGTGGCATGCATGGAGGACTCTCCTC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGCAGAAAGCAAACCCGTaGACAGGGACCCGGCACCCC +
Preference number: 2 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVQKANP*TGTRHP
Trigger: GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTG...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCTGGCCCCACCGGGTaGCACTCTCTGCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLPGPTG*HSLQQQ
Trigger: CTGCTGCTGCAGAGAGTGGCACCCGGTGGGGCCAGG...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGCCTCCAGGATGGTCCTaGGTCAGTACCAGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: RDALLEFCPLASRGRASVPPGWS*VSTRWV
Trigger: CACCCACCTGGTACTGACCCAGGACCATCCTGGAGG...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCCTGCCTGGCCACCTaGCAGGGAAGGGGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRACLAT*QGRGLP
Trigger: TGGAAGGCCCCTTCCCTGGCAGGTGGCCAGGCAGGC...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGCCATCCCAGAGCCCCTaGCCCCACCGGGTGCCACTC +
Preference number: 2 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQPSQSP*PHRVPL
Trigger: GAGTGGCACCCGGTGGGGCCAGGGGCTCTGGGATGG...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCGAAGTCTGCACCTCCTaGGAAGGGAGGATTCTCCCT +
Preference number: 2 (lower is better)
Translates to: PKAEPPAHPGGAATAALCEVCTS*EGRILP
Trigger: AGGGAGAATCCTCCCTTCCCAGGAGGTGCAGACTTC...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCCTAGGAGCCTGCTCTaGCGAGGGAAGGTGTCGCTG +
Preference number: 2 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCPRSLL*RGKVSL
Trigger: CAGCGACACCTTCCCTCGCCAGAGCAGGCTCCTAGG...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTTCTCCCTCAAGCAGTaGCAGCCCACCCCCTGGACA +
Preference number: 2 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPFSLKQ*QPTPWT
Trigger: TGTCCAGGGGGTGGGCTGTCACTGCTTGAGGGAGAA...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCGCCTGCCTGGCCACCTaGCAGGGAAGGGGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSACLAT*QGRGLP
Trigger: TGGAAGGCCCCTTCCCTGGCAGGTGGCCAGGCAGGC...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCACCTCCAGGATGGTCCTaGGTCAGTACCAGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: TATPLGRGTREGLCRWFSPPGWS*VSTRWV
Trigger: CACCCACCTGGTACTGACCCAGGACCATCCTGGAGG...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGGGTGCCCCAACTACATaGCAGGCAGTGCATAACCTT +
Preference number: 2 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVGAPTT*QAVHNL
Trigger: AAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACC...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCCACTTCAGCTGGGTaGACCTGTACCGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLPTSAG*TCTELQ
Trigger: CTGGAGCTCGGTACAGGTCCACCCAGCTGAAGTGGG...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCAGGCAGGATGGGTTCTaGTGCCTCTGCCTGGACCAG +
Preference number: 2 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPRQDGF*CLCLDQ
Trigger: CTGGTCCAGGCAGAGGCACCAGAACCCATCCTGCCT...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAGAGGGAAGGTGTCGCTaGAGAAGTGGGCTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: TATPLGRGTREGLCRWFSEGRCR*RSGLQA
Trigger: TGCCTGGAGCCCACTTCTCCAGCGACACCTTCCCTC...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAGAGGGAAGGTGTCGCTaGAGAAGTGGGCTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGEGRCR*RSGLQA
Trigger: TGCCTGGAGCCCACTTCTCCAGCGACACCTTCCCTC...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCGTTCCTGTCAAGCACTaGGCTTCCCTGATTCTAAGC +
Preference number: 2 (lower is better)
Translates to: PKAEPPAHPGGAATAALCVPVKH*ASLILS
Trigger: GCTTAGAATCAGGGAAGCTCAGTGCTTGACAGGAAC...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGCAGGTGGGTGCTGGCTaGTCTCCATCCTCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRQVGAG*SPSSRE
Trigger: CTCCCTTGAGGATGGAGAGCAGCCAGCACCCACCTG...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGAGACGCAATTGCACCTaGAGCTTGCCTTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVRRNCT*SLPSWE
Trigger: TTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCT...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGACCGGGTGCCACTCTCTaGAGCAGCAGAAGTCCCTTT +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGPGATL*SSRSPF
Trigger: AAAGGGACTTCTGCTGCTGCAGAGAGTGGCACCCGG...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGATGGGTCAGTACCAGGTaGGTGCTGGCTGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGWVSTR*VLAALH
Trigger: ATGGAGAGCAGCCAGCACCCACCTGGTACTGACCCA...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGGAAAGCCCTCCAGGATaGTCCTGGGTCAGTACCAGG +
Preference number: 2 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLESPPG*SWVSTR
Trigger: CCTGGTACTGACCCAGGACCATCCTGGAGGGCTTTC...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTATAACCTTAATGACGTaGGCTGGCCCTGGGTACTAC +
Preference number: 2 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCITLMT*AGPGYY
Trigger: GTAGTACCCAGGGCCAGCCCACGTCATTAAGGTTAT...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGTGCTTTAAGCCAAAGTaGTGCTGGAGGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLCFKPK*CWRGWA
Trigger: GGCCCAGCCCCTCCAGCACCACTTTGGCTTAAAGCA...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCGGAGAACCCTGGCCATaGTTCCTTCCTGGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCGEPWP*FLPGPH
Trigger: GTGAGGACCAGGAAGGAACCATGGCCAGGGTTCTCC...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCTGGAGTTCTGTCCCCTaGCCAGTCGTGGGCGGGCCT +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCWSSVP*PVVGGP
Trigger: AGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCA...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 90 bp GATGGGGGAGGTAGTAGGTTACTCTGGGACTCCCTGAAGGCGGTGTaGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGG +
Preference number: 2 (lower is better)
Translates to: DGGGSRLLWDSLKAV*MGNVQKANPCTGTR
Trigger: CCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACACCGCCTTCAGGGAGTCCCAGAGTAACCTACTACCTCCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCGGGAGCAGGGAAGGGTaGTATGCAAATGGGACTGTG +
Preference number: 2 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPGSREG*YANGTV
Trigger: CACAGTCCCATTTGCATATCACCCTTCCCTGCTCCC...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGACTAGGCTCACTCCCTTaGCCCAGTGGTAGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGLGSLP*PSGSGK
Trigger: TTTCCCACTACCACTGGGGCAAGGGAGTGAGCCTAG...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGCTGAAATGCTCACACTaGAGAAAAGGCAGGATGGGT +
Preference number: 2 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVLKCSH*RKGRMG
Trigger: ACCCATCCTGCCTTTTCTCCAGTGTGAGCATTTCAG...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGGTGTCGCTGGAGAAGTaGGCTCCAGGCATTGGTCTT +
Preference number: 2 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLVSLEK*APGIGL
Trigger: AAGACCAATGCCTGGAGCCCACTTCTCCAGCGACAC...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCGCTTCAGATGCCCCATaGATTGCCAAGCTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPASDAP*IAKLSV
Trigger: CACAGAGAGCTTGGCAATTCATGGGGCATCTGAAGC...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTCCACCATTTGCTCACTaGGTTCCTATTTCCATAGAC +
Preference number: 2 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCPPFAH*VPISID
Trigger: GTCTATGGAAATAGGAACTCAGTGAGCAAATGGTGG...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGATGGTCCTCACGTTTGTaGTGGGTTGACCTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGWSSRL*WVDLEA
Trigger: AGCCTCAAGGTCAACCCATCACAAACGTGAGGACCA...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCACATGGGCCCCTACGATaGTTTTCCAAGGCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: TATPLGRGTREGLCRWFSHGPLR*FSKAPD
Trigger: ATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATG...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGCAGGTGGGTGCTGGCTaGTCTCCATCCTCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVQVGAG*SPSSRE
Trigger: CTCCCTTGAGGATGGAGAGCAGCCAGCACCCACCTG...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGAGGGGAAAGTCTCAGTaGACACAGGGATGCAGCACG +
Preference number: 2 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRRGKSQ*TQGCST
Trigger: CGTGCTGCATCCCTGTGTCCACTGAGACTTTCCCCT...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCACTTAATGACGTGGGCTaGCCCTGGGTACTACCACAT +
Preference number: 2 (lower is better)
Translates to: TATPLGRGTREGLCRWFSLNDVG*PWVLPH
Trigger: ATGTGGTAGTACCCAGGGCCAGCCCACGTCATTAAG...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGGGTGCCCCAACTACATaGCAGGCAGTGCATAACCTT +
Preference number: 2 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLGAPTT*QAVHNL
Trigger: AAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACC...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCAGGGACAGACAGGCATaGGCCCCTACGATGATTTTC +
Preference number: 2 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPRDRQA*APTMIF
Trigger: GAAAATCATCGTAGGGGCCCATGCCTGTCTGTCCCT...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 90 bp GGTCTTGCCTTGGGCCAGAAAACAAGACGCAATTGCACCTGCAGCTaGCCTTCTTGGGAACAGTCCCTCCTTCCCAGACTCCTGGGATGT +
Preference number: 2 (lower is better)
Translates to: GLALGQKTRRNCTCS*PSWEQSLLPRLLGC
Trigger: ACATCCCAGGAGTCTGGGAAGGAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGAAGCAGACAGTACCTaGCTGTGTTTATCTAATGGT +
Preference number: 2 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCEADST*LCLSNG
Trigger: ACCATTAGATAAACACAGGCAGGTACTGTCTGCTTC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGTTTAAGCCAAAGTGGTaGTGGAGGGGCTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQFKPKW*WRGWAS
Trigger: TGAGGCCCAGCCCCTCCAGCACCACTTTGGCTTAAA...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGACAGGTTGTACAGGGATaGACTACTGGAGTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGQVVQG*TTGVLS
Trigger: GGACAGAACTCCAGTAGTGCATCCCTGTACAACCTG...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGGTAAAGAGGTCCTTGTaGATTCTTCTCTTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: RDALLEFCPLASRGRASVVKRSL*ILLFLC
Trigger: ACACAGGAAGAGAAGAATCCACAAGGACCTCTTTAC...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCTGGGTCAGTACCAGGTaGGTGCTGGCTGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSWVSTR*VLAALH
Trigger: ATGGAGAGCAGCCAGCACCCACCTGGTACTGACCCA...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAGCAGGGATCAGCAACTaGGTTTTAGGCACTGCTGAA +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGAGISN*VLGTAE
Trigger: TTCAGCAGTGCCTAAAACCCAGTTGCTGATCCCTGC...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCATAACCTTAATGACGTaGGCTGGCCCTGGGTACTAC +
Preference number: 2 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCITLMT*AGPGYY
Trigger: GTAGTACCCAGGGCCAGCCCACGTCATTAAGGTTAT...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCGGAGAACCCTGGCCATaGTTCCTTCCTGGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCGEPWP*FLPGPH
Trigger: GTGAGGACCAGGAAGGAACCATGGCCAGGGTTCTCC...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCATCCCCTGGCCAGTCGTaGGCGGGCCTCTGTGGCACT +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVASPGQS*AGLCGT
Trigger: AGTGCCACAGAGGCCCGCCCACGACTGGCCAGGGGA...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGACATCTACACTGAACTaGGACGGAAGCATAAATATG +
Preference number: 2 (lower is better)
Translates to: RDALLEFCPLASRGRASVTSTLN*DGSINM
Trigger: CATATTTATGCTTCCGTCTCAGTTCAGTGTAGATGT...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAGAGATCTCGGGGAATTaGTCACAGAACTCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: TATPLGRGTREGLCRWFSEISGN*SQNSLV
Trigger: AACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTC...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGTTCCTGTCAAGCACTaGGCTTCCCTGATTCTAAGC +
Preference number: 2 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRVPVKH*ASLILS
Trigger: GCTTAGAATCAGGGAAGCTCAGTGCTTGACAGGAAC...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAAAGGCTCCTGATGCCTaGAATACCACCAGTAACACT +
Preference number: 2 (lower is better)
Translates to: TATPLGRGTREGLCRWFSKAPDA*NTTSNT
Trigger: AGTGTTACTGGTGGTATTTCAGGCATCAGGAGCCTT...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCACTACATGGCAGGCAGTaGATAACCTTAATGACGTGG +
Preference number: 2 (lower is better)
Translates to: TATPLGRGTREGLCRWFSLHGRQ*ITLMTW
Trigger: CCACGTCATTAAGGTTATGCACTGCCTGCCATGTAG...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTCCAGGGGATCTGTGTaGCTAATCTTCAGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPSRGSV*LIFSLS
Trigger: AGACAAGCTGAAGATTAGGCACACAGATCCCCTGGA...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCTTTAAGCCAAAGTGGTaGTGGAGGGGCTGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCFKPKW*WRGWAS
Trigger: TGAGGCCCAGCCCCTCCAGCACCACTTTGGCTTAAA...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCAGGGATCAGCAACTaGGTTTTAGGCACTGCTGAA +
Preference number: 2 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRAGISN*VLGTAE
Trigger: TTCAGCAGTGCCTAAAACCCAGTTGCTGATCCCTGC...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCACAGGGATGCACTACTaGAGTTCTGTCCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCTGMHY*SSVPWP
Trigger: TGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTGT...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCTGCCCTCACAGCGTTTaGGAAGGCTGCCCTGTACAT +
Preference number: 2 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSCPHSV*EGCPVH
Trigger: ATGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCA...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCGGTTTTAGGCACTGCTaGATCAGCTGCTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCGFRHC*ISCFAA
Trigger: GGCAGCAAAGCAGCTGATTCAGCAGTGCCTAAAACC...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCGGTTTTAGGCACTGCTaGATCAGCTGCTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSGFRHC*ISCFAA
Trigger: GGCAGCAAAGCAGCTGATTCAGCAGTGCCTAAAACC...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCCACCATTTGCTCACTaGGTTCCTATTTCCATAGAC +
Preference number: 2 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCPPFAH*VPISID
Trigger: GTCTATGGAAATAGGAACTCAGTGAGCAAATGGTGG...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGATTTTCCAAGGCTCCTaGTGCCTGAAATACCACCAG +
Preference number: 2 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRIFQGS*CLKYHQ
Trigger: CTGGTGGTATTTCAGGCATCAGGAGCCTTGGAAAAT...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGAAATAATGTATGGTaGCCCAACTACATGGCAGGC +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGRNNVW*PNYMAG
Trigger: GCCTGCCATGTAGTTGGGGCACCATACATTATTTCT...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCAAAACAAGACGCAATTaGACCTGCAGCTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPKTRRN*TCSLPS
Trigger: AGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTT...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAGAAGTCTGCACCTCCTaGGAAGGGAGGATTCTCCCT +
Preference number: 2 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPEVCTS*EGRILP
Trigger: AGGGAGAATCCTCCCTTCCCAGGAGGTGCAGACTTC...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCTTGGCTCAGAGATTCTaGGAAGAAATAATGTATGGT +
Preference number: 2 (lower is better)
Translates to: PKAEPPAHPGGAATAALCLAQRF*EEIMYG
Trigger: ACCATACATTATTTCTTCCCAGAATCTCTGAGCCAA...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCAAGAGGGTGTTTATaGACCACATCTGGGGATTCT +
Preference number: 2 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRARGCL*TTSGDS
Trigger: AGAATCCCCAGATGTGGTCCATAAACACCCTCTTGC...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAGATCACAGAACTCTCTaGTTGAAGTCTCTTGTCCCT +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGDHRTL*LKSLVP
Trigger: AGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 90 bp ATATCACATCCGCCTAGTGGCCCTGAGCAGAGAAGAAAGTTGGTCTaGCCTTGGGCCAGAAAACAAGACGCAATTGCACCTGCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: ISHPPSGPEQRRKLV*PWARKQDAIAPAAC
Trigger: GCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCTCTGCTCAGGGCCACTAGGCGGATGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 90 bp GAACCCTGGCCATGGTTCCTTCCTGGTCCTCACGTTTGTGATGGGTaGACCTTGAGGCTGGTCTCCCAGAAACATTCTGTAAAGCATCCT +
Preference number: 2 (lower is better)
Translates to: EPWPWFLPGPHVCDG*TLRLVSQKHSVKHP
Trigger: AGGATGCTTTACAGAATGTTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAACCATGGCCAGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAGCTTCAGATGCCCCATaGATTGCCAAGCTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPASDAP*IAKLSV
Trigger: CACAGAGAGCTTGGCAATTCATGGGGCATCTGAAGC...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAGGAAGAAATAATGTATaGTGCCCCAACTACATGGCA +
Preference number: 2 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGGRNNV*CPNYMA
Trigger: TGCCATGTAGTTGGGGCACCATACATTATTTCTTCC...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGAAGCCAAAGTGGTGCTaGAGGGGCTGGGCCTCAGCG +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVKPKWC*RGWASA
Trigger: CGCTGAGGCCCAGCCCCTCCAGCACCACTTTGGCTT...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGTTCTCCCTCAAGCAGTaGCAGCCCACCCCCTGGACA +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVFSLKQ*QPTPWT
Trigger: TGTCCAGGGGGTGGGCTGTCACTGCTTGAGGGAGAA...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACAGAGGAGAGTCCTCCATaGATGCCACCGCGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: LILSRKLRRCRDLGELITEESPP*MPPRVA
Trigger: GGCCACACGCGGTGGCATGCATGGAGGACTCTCCTC...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCAGATGCCCCATGAATTaGCAAGCTCTCTGTGACACT +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCRCPMN*QALCDT
Trigger: AGTGTCACAGAGAGCTTGGCAATTCATGGGGCATCT...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCAGATGCCCCATGAATTaGCAAGCTCTCTGTGACACT +
Preference number: 2 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSRCPMN*QALCDT
Trigger: AGTGTCACAGAGAGCTTGGCAATTCATGGGGCATCT...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCTCTCTATAAATACATaGTACCCACCATTTGCTCAC +
Preference number: 2 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCLSINT*YPPFAH
Trigger: GTGAGCAAATGGTGGGTAGCATGTATTTATAGAGAG...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCATGTAAAACCAAATGCTaGGCGCGAGAGGGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPCKTKC*AREGKV
Trigger: GACTTTCCCCTCTCGCGCCCAGCATTTGGTTTTACA...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCGACGTGGGCTGGCCCTaGGTACTACCACATTCCCAC +
Preference number: 2 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTDVGWP*VLPHSH
Trigger: GTGGGAATGTGGTAGTACCCAGGGCCAGCCCACGTC...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCAAGTTGGTCTTGCCTTaGGCCAGAAAACAAGACGCA +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCKLVLP*ARKQDA
Trigger: TGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTT...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 90 bp TGGCCATGGTTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTaGAGGCTGGTCTCCCAGAAACATTCTGTAAAGCATCCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: WPWFLPGPHVCDGLT*RLVSQKHSVKHPSK
Trigger: CTTTGAAGGATGCTTTACAGAATGTTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAACCATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCACTGAATCAGCTGCTTTaGTGCCCCGCGAGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVALNQLL*CPASSF
Trigger: AAAGGAGCTCGCGGGGCAGCAAAGCAGCTGATTCAG...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCATAAATATCTCGGATaGAGAGAACAGGGACTATAT +
Preference number: 2 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCHKYLG*REQGLY
Trigger: ATATAGTCCCTGTTCTCTGCATCCGAGATATTTATG...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGAGAAAACTCAGAAGATaGAGAGATCTCGGGGAATTG +
Preference number: 2 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQRKLRR*RDLGEL
Trigger: CAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCT...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCGAAAGCCCTCCAGGATaGTCCTGGGTCAGTACCAGG +
Preference number: 2 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTESPPG*SWVSTR
Trigger: CCTGGTACTGACCCAGGACCATCCTGGAGGGCTTTC...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGTTTCCCCTTTTATCCTaGGGTGAGAAGGCTCGTATT +
Preference number: 2 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVFPLLS*GEKARI
Trigger: AATACGAGCCTTCTCACCCCAGGATAAAAGGGGAAA...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCTTTCCCCTTTTATCCTaGGGTGAGAAGGCTCGTATT +
Preference number: 2 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSFPLLS*GEKARI
Trigger: AATACGAGCCTTCTCACCCCAGGATAAAAGGGGAAA...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCTGCTTTAAGCCAAAGTaGTGCTGGAGGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: PSLESLHSLYKYMLPTICCFKPK*CWRGWA
Trigger: GGCCCAGCCCCTCCAGCACCACTTTGGCTTAAAGCA...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCTCCTTCCCAGACTCCTaGGATGTGTGTTCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTSFPDS*DVCSAG
Trigger: CCCTGCCGAACACACATCCCAGGAGTCTGGGAAGGA...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAAAGTTGGTCTTGCCTTaGGCCAGAAAACAAGACGCA +
Preference number: 2 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPKLVLP*ARKQDA
Trigger: TGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTT...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCGATCACAGAACTCTCTaGTTGAAGTCTCTTGTCCCT +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCDHRTL*LKSLVP
Trigger: AGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCGAAGCAGACAGTACCTaGCTGTGTTTATCTAATGGT +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCEADST*LCLSNG
Trigger: ACCATTAGATAAACACAGGCAGGTACTGTCTGCTTC...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCAGAAAACTCAGAAGATaGAGAGATCTCGGGGAATTG +
Preference number: 2 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSRKLRR*RDLGEL
Trigger: CAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCT...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCAGGGGAAAGTCTCAGTaGACACAGGGATGCAGCACG +
Preference number: 2 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTRGKSQ*TQGCST
Trigger: CGTGCTGCATCCCTGTGTCCACTGAGACTTTCCCCT...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCGGAAGAAATAATGTATaGTGCCCCAACTACATGGCA +
Preference number: 2 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSGRNNV*CPNYMA
Trigger: TGCCATGTAGTTGGGGCACCATACATTATTTCTTCC...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAAGGGACAGACAGGCATaGGCCCCTACGATGATTTTC +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVARDRQA*APTMIF
Trigger: GAAAATCATCGTAGGGGCCCATGCCTGTCTGTCCCT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTGTGTGCGGGAGGTGTTaGTGCCCACAGGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSVCGRC*CPQGEG
Trigger: CCCCTCACCCTGTGGGCACCAACACCTCCCGCACAC...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGTTGCCAAGCTCTCTGTaGCACTATGGTGTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVLPSSL*HYGVLA
Trigger: GGCAAGGACACCATAGTGTCACAGAGAGCTTGGCAA...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCACCATCCTCAAGGGAGTaGATACGAAACTTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAPSSRE*IRNFPG
Trigger: ACCAGGGAAGTTTCGTATGCACTCCCTTGAGGATGG...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGATTGCACCTGCAGCTTaGCTTCTTGGGAACAGTCCC +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVIAPAA*LLGNSP
Trigger: GGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAAT...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCCTCTCTGTGACACTATaGTGTCCTTGCCCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTLSVTL*CPCPRQ
Trigger: CTGCCTTGGGCAAGGACACCATAGTGTCACAGAGAG...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTTCCTTCCCAGACTCCTaGGATGTGTGTTCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTSFPDS*DVCSAG
Trigger: CCCTGCCGAACACACATCCCAGGAGTCTGGGAAGGA...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAAAGGCTCCTGATGCCTaGAATACCACCAGTAACACT +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAKAPDA*NTTSNT
Trigger: AGTGTTACTGGTGGTATTTCAGGCATCAGGAGCCTT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAATTTTCCAAGGCTCCTaGTGCCTGAAATACCACCAG +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAIFQGS*CLKYHQ
Trigger: CTGGTGGTATTTCAGGCATCAGGAGCCTTGGAAAAT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGCTGAATCAGCTGCTTTaGTGCCCCGCGAGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: CSLSSYFHRHNINISDAELNQLL*CPASSF
Trigger: AAAGGAGCTCGCGGGGCAGCAAAGCAGCTGATTCAG...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCAGACGCAATTGCACCTaGAGCTTGCCTTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTRRNCT*SLPSWE
Trigger: TTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCT...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGCAGGTTGTACAGGGATaGACTACTGGAGTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVQVVQG*TTGVLS
Trigger: GGACAGAACTCCAGTAGTGCATCCCTGTACAACCTG...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCTTGGCTCAGAGATTCTaGGAAGAAATAATGTATGGT +
Preference number: 2 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCLAQRF*EEIMYG
Trigger: ACCATACATTATTTCTTCCCAGAATCTCTGAGCCAA...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTTTCAGCTTGTCTCACTaGTGGTGGGAGCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTFSLSH*WWEQGR
Trigger: CCTTCCCTGCTCCCACCACCAGTGAGACAAGCTGAA...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGCCTTCAAAGAAGTCCTaGGGAGCTTTACGGACCATC +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVPSKKS*GALRTI
Trigger: GATGGTCCGTAAAGCTCCCCAGGACTTCTTTGAAGG...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTGGAGGGAGGGACCAGTaGCCAGACTGTCAAGGAAGT +
Preference number: 2 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSGGRDQ*PDCQGS
Trigger: ACTTCCTTGACAGTCTGGTCACTGGTCCCTCCCTCC...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTCAGTGGACACAGGGATaGAGCACGAGAAACACAACC +
Preference number: 2 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTQWTQG*STRNTT
Trigger: GGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTG...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATATTGCACCTGCAGCTTaGCTTCTTGGGAACAGTCCC +
Preference number: 2 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYIAPAA*LLGNSP
Trigger: GGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAAT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACATGTAAAACCAAATGCTaGGCGCGAGAGGGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: LILSRKLRRCRDLGELITCKTKC*AREGKV
Trigger: GACTTTCCCCTCTCGCGCCCAGCATTTGGTTTTACA...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGAGCAGAGAAGAAAGTTaGTCTTGCCTTGGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVSREES*SCLGPE
Trigger: TTCTGGCCCAAGGCAAGACCAACTTTCTTCTCTGCT...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCGCAAGAGGGTGTTTATaGACCACATCTGGGGATTCT +
Preference number: 2 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTARGCL*TTSGDS
Trigger: AGAATCCCCAGATGTGGTCCATAAACACCCTCTTGC...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAATACTCTACAGCAAATaGAGAACCCTGGCCATGGTT +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAILYSK*RTLAMV
Trigger: AACCATGGCCAGGGTTCTCCATTTGCTGTAGAGTAT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 90 bp CAGAAGATGCAGAGATCTCGGGGAATTGATCACAGAACTCTCTGGTaGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTTTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: QKMQRSRGIDHRTLW*KSLVPNLVIVTLLP
Trigger: AGGGAGCAAAGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCTGCATCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGAGAGCTTGCAGAATTaGCTTTTTCAGCACCTCTCA +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVESLQN*LFQHLS
Trigger: TGAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTC...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACAGAAGAAAGTTGGTCTTaGCTTGGGCCAGAAAACAAG +
Preference number: 2 (lower is better)
Translates to: LILSRKLRRCRDLGELITEESWS*LGPENK
Trigger: CTTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTC...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTAGCAGAGAAGAAAGTTaGTCTTGCCTTGGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTSREES*SCLGPE
Trigger: TTCTGGCCCAAGGCAAGACCAACTTTCTTCTCTGCT...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAATTCTCTCCTTTAGGTaGACATACATAACCGTTATG +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAILSFR*TYITVM
Trigger: CATAACGGTTATGTATGTTCACCTAAAGGAGAGAAT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATAAAACAAGACGCAATTaGACCTGCAGCTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYKTRRN*TCSLPS
Trigger: AGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCCTTAATGACGTGGGCTaGCCCTGGGTACTACCACAT +
Preference number: 2 (lower is better)
Translates to: TNTILYFSRHFTISSISPLNDVG*PWVLPH
Trigger: ATGTGGTAGTACCCAGGGCCAGCCCACGTCATTAAG...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATGAGAGCTTGCAGAATTaGCTTTTTCAGCACCTCTCA +
Preference number: 2 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYESLQN*LFQHLS
Trigger: TGAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTC...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATACTCAAACCAACAGGTaGCCTGTGAATGCGAGTAAA +
Preference number: 2 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYTQTNR*PVNASK
Trigger: TTTACTCGCATTCACAGGCCACCTGTTGGTTTGAGT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR TCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCTCCACTCACTGGGTGTaGAGACACACCTGGATTAAC +
Preference number: 2 (lower is better)
Translates to: TNTILYFSRHFTISSISPSTHWV*RHTWIN
Trigger: GTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGA...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCCTGTGTAAAACCAAATaGTGGGCGCGAGAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: TNTILYFSRHFTISSISPLCKTK*WAREGK
Trigger: TTTCCCCTCTCGCGCCCAGCATTTGGTTTTACACAG...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAGTCTCCTTAATTTTGTaGTTTATGTACTATTCTGGC +
Preference number: 2 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAVSLIL*FMYYSG
Trigger: GCCAGAATAGTACATAAACCACAAAATTAAGGAGAC...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTGAAGAAAGTTGGTCTTaGCTTGGGCCAGAAAACAAG +
Preference number: 2 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSEESWS*LGPENK
Trigger: CTTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTC...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTAGGGTGATATGCAAATaGGACTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSRVICK*DCVCVC
Trigger: ACACACACACACACAGTCCCATTTGCATATCACCCT...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGTCTCCTTAATTTTGTaGTTTATGTACTATTCTGGC +
Preference number: 2 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVVSLIL*FMYYSG
Trigger: GCCAGAATAGTACATAAACCACAAAATTAAGGAGAC...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCAGGGTGATATGCAAATaGGACTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: TNTILYFSRHFTISSISPRVICK*DCVCVC
Trigger: ACACACACACACACAGTCCCATTTGCATATCACCCT...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCTACATAACCGTTATGTaGAGGTTGTACAGGGATGCA +
Preference number: 2 (lower is better)
Translates to: TNTILYFSRHFTISSISPYITVM*RLYRDA
Trigger: TGCATCCCTGTACAACCTGCACATAACGGTTATGTA...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCTCTATCCACTCTTATTaGCAGAGGAAAGATGAACTG +
Preference number: 2 (lower is better)
Translates to: TNTILYFSRHFTISSISPSIHSY*QRKDEL
Trigger: CAGTTCATCTTTCCTCTGCCAATAAGAGTGGATAGA...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR GCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCCATAAATATCTCGGATaGAGAGAACAGGGACTATAT +
Preference number: 2 (lower is better)
Translates to: TNTILYFSRHFTISSISPHKYLG*REQGLY
Trigger: ATATAGTCCCTGTTCTCTGCATCCGAGATATTTATG...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp GGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTaGGCGGGCCTCTGTGGCACTGCCCAGGTGCCTAGG +
Preference number: 3 (lower is better)
Translates to: GCTTGVLSPGQS*AGLCGTAQVPR
Trigger: CCTAGGCACCTGGGCAGTGCCACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp GCACCTCCTGGGAAGGGAGGATTCTCCCTCAAGCAGTaGCAGCCCACCCCCTGGACACACCCAGAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: APPGKGGFSLKQ*QPTPWTHPESP
Trigger: AGGGCTTTCTGGGTGTGTCCAGGGGGTGGGCTGTCACTGCTTGAGGGAGAATCCTCCCTTCCCAGGAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp CCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTaGCCTCACAGCGTTTGGGAAGGCTGCCCTGTACAT +
Preference number: 3 (lower is better)
Translates to: PAHPGGAATAAL*PHSVWEGCPVH
Trigger: ATGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp GCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTaGCCAGACTGTCAAGGAAGTACATTCAGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: ATGRRREGGRDQ*PDCQGSTFSGC
Trigger: ACACCCACTGAATGTACTTCCTTGACAGTCTGGTCACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp CCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATaGTTTTCATCTGTGTGCGGGAGGTGTTGGTGCCCA +
Preference number: 3 (lower is better)
Translates to: PLGRGTREGLCR*FSSVCGRCWCP
Trigger: TGGGCACCAACACCTCCCGCACACAGATGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTAATTGCACCTGCAGCTaGCCTTCTTGGGAACAGTCC +
Preference number: 3 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCNCTCS*PSWEQS
Trigger: GGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATT...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp GGAGCAGCCACAGCAGCTCTGTGCCCTCACAGCGTTTaGGAAGGCTGCCCTGTACATAGCCTTCCCATTACA +
Preference number: 3 (lower is better)
Translates to: GAATAALCPHSV*EGCPVHSLPIT
Trigger: TGTAATGGGAAGGCTATGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCACAGAGCTGCTGTGGCTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp GAAATGCTCACACTGGAGAAAAGGCAGGATGGGTTCTaGTGCCTCTGCCTGGACCAGGAGGGGGAGGTGAAC +
Preference number: 3 (lower is better)
Translates to: EMLTLEKRQDGF*CLCLDQEGEVN
Trigger: GTTCACCTCCCCCTCCTGGTCCAGGCAGAGGCACCAGAACCCATCCTGCCTTTTCTCCAGTGTGAGCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp GGGCAGAGGAGCGATGGGGGAGGTAGTAGGTTACTCTaGGACTCCCTGAAGGCGGTGTTGATGGGCAATGTT +
Preference number: 3 (lower is better)
Translates to: GQRSDGGGSRLL*DSLKAVLMGNV
Trigger: AACATTGCCCATCAACACCGCCTTCAGGGAGTCCCAGAGTAACCTACTACCTCCCCCATCGCTCCTCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTAGAAGAAAGTTGGTCTaGCCTTGGGCCAGAAAACAA +
Preference number: 3 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCRRKLV*PWARKQ
Trigger: TTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCT...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTCACAGAACTCTCTGGTaGAAGTCTCTTGTCCCTAAT +
Preference number: 3 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCHRTLW*KSLVPN
Trigger: ATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTG...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGCACGTTTGTGATGGGTaGACCTTGAGGCTGGTCTCC +
Preference number: 3 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRHVCDG*TLRLVS
Trigger: GGAGACCAGCCTCAAGGTCAACCCATCACAAACGTG...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCGTGCCCTCACAGCGTTaGGGAAGGCTGCCCTGTACA +
Preference number: 3 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSVPSQR*GRLPCT
Trigger: TGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCAC...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp AGGATGGTCCTGGGTCAGTACCAGGTGGGTGCTGGCTaGTCTCCATCCTCAAGGGAGTGCATACGAAACTTC +
Preference number: 3 (lower is better)
Translates to: RMVLGQYQVGAG*SPSSRECIRNF
Trigger: GAAGTTTCGTATGCACTCCCTTGAGGATGGAGAGCAGCCAGCACCCACCTGGTACTGACCCAGGACCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp GGCCTTCCAGAGAGGTGGGTTTCCAGGGGATCTGTGTaGCTAATCTTCAGCTTGTCTCACTGGTGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: GLPERWVSRGSV*LIFSLSHWWWE
Trigger: CTCCCACCACCAGTGAGACAAGCTGAAGATTAGGCACACAGATCCCCTGGAAACCCACCTCTCTGGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp GCCCCAGTGGTAGTGGGAAAAAGAACCCACTTCAGCTaGGTGGACCTGTACCGAGCTCCAGCAACTTCCACT +
Preference number: 3 (lower is better)
Translates to: APVVVGKRTHFS*VDLYRAPATST
Trigger: AGTGGAAGTTGCTGGAGCTCGGTACAGGTCCACCCAGCTGAAGTGGGTTCTTTTTCCCACTACCACTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAGACACTATGGTGTCCTaGCCCAAGGCAGTTATTTCC +
Preference number: 3 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGDTMVS*PKAVIS
Trigger: GGAAATAACTGCCTTGGGCAAGGACACCATAGTGTC...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCGGAGAGCTTGCAGAATaGGCTTTTTCAGCACCTCTC +
Preference number: 3 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPGELAE*AFSAPL
Trigger: GAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTCC...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp GAGAGCAGGGATCAGCAACTGGGTTTTAGGCACTGCTaGATCAGCTGCTTTGCTGCCCCGCGAGCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: ESRDQQLGFRHC*ISCFAAPRAPF
Trigger: AAAAGGAGCTCGCGGGGCAGCAAAGCAGCTGATTCAGCAGTGCCTAAAACCCAGTTGCTGATCCCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp ACCCTGGCCATGGTTCCTTCCTGGTCCTCACGTTTGTaGTGGGTTGACCTTGAGGCTGGTCTCCCAGAAACA +
Preference number: 3 (lower is better)
Translates to: TLAMVPSWSSRL*WVDLEAGLPET
Trigger: TGTTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAACCATGGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp TGGGCCAGAAAACAAGACGCAATTGCACCTGCAGCTTaGCTTCTTGGGAACAGTCCCTCCTTCCCAGACTCC +
Preference number: 3 (lower is better)
Translates to: WARKQDAIAPAA*LLGNSPSFPDS
Trigger: GGAGTCTGGGAAGGAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp CTTGCCTTGGGCCAGAAAACAAGACGCAATTGCACCTaGAGCTTGCCTTCTTGGGAACAGTCCCTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: LALGQKTRRNCT*SLPSWEQSLLP
Trigger: GGGAAGGAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp AAACCAAATGCTGGGCGCGAGAGGGGAAAGTCTCAGTaGACACAGGGATGCAGCACGAGAAACACAACCACG +
Preference number: 3 (lower is better)
Translates to: KPNAGRERGKSQ*TQGCSTRNTTT
Trigger: CGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTTCCCCTCTCGCGCCCAGCATTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp GTGTCGCTGGAGAAGTGGGCTCCAGGCATTGGTCTTTaGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATG +
Preference number: 3 (lower is better)
Translates to: VSLEKWAPGIGL*GFLPLMNPRLM
Trigger: CATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATGCCTGGAGCCCACTTCTCCAGCGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGAATTGCACCTGCAGCTaGCCTTCTTGGGAACAGTCC +
Preference number: 3 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQNCTCS*PSWEQS
Trigger: GGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATT...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp TCTAGCGACTTGCTTTTAAGACTGTGGCTGCTGAGGTaGCCATACCTAGGCTCACTCCCTTGCCCCAGTGGT +
Preference number: 3 (lower is better)
Translates to: SSDLLLRLWLLR*PYLGSLPCPSG
Trigger: ACCACTGGGGCAAGGGAGTGAGCCTAGGTATGGTCACCTCAGCAGCCACAGTCTTAAAAGCAAGTCGCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp GTTGGTCTTGCCTTGGGCCAGAAAACAAGACGCAATTaGACCTGCAGCTTGCCTTCTTGGGAACAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: VGLALGQKTRRN*TCSLPSWEQSL
Trigger: GAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp ACAGCAGCTCTGTGCCCTCACAGCGTTTGGGAAGGCTaGCCTGTACATAGCCTTCCCATTACATGGGGTATT +
Preference number: 3 (lower is better)
Translates to: TAALCPHSVWEG*PVHSLPITWGI
Trigger: AATACCCCATGTAATGGGAAGGCTATGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCACAGAGCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp GGACCAGTGACCAGACTGTCAAGGAAGTACATTCAGTaGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTA +
Preference number: 3 (lower is better)
Translates to: GPVTRLSRKYIQ*VCGVHIPGSRV
Trigger: TACACGTGAGCCTGGAATGTGGACACCGCACACCCACTGAATGTACTTCCTTGACAGTCTGGTCACTGGTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAAGAGTAAAGAGGTCCTaGTGGATTCTTCTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: TATPLGRGTREGLCRWFSRVKRS*WILLFL
Trigger: CAGGAAGAGAAGAATCCACAAGGACCTCTTTACTCT...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGAGAGTAAAGAGGTCCTaGTGGATTCTTCTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLRVKRS*WILLFL
Trigger: CAGGAAGAGAAGAATCCACAAGGACCTCTTTACTCT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp CTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTaGAATGCTCACACTGGAGAAAAGGCAGGATGGGTT +
Preference number: 3 (lower is better)
Translates to: LPLMNPRLMVAP*NAHTGEKAGWV
Trigger: AACCCATCCTGCCTTTTCTCCAGTGTGAGCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp TCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATaGTCACACTGGAGAAAAGGCAGGATGGGTTCTGGT +
Preference number: 3 (lower is better)
Translates to: SHEPKADGGSLK*SHWRKGRMGSG
Trigger: ACCAGAACCCATCCTGCCTTTTCTCCAGTGTGAGCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp CAACTACATGGCAGGCAGTGCATAACCTTAATGACGTaGGCTGGCCCTGGGTACTACCACATTCCCACAGAT +
Preference number: 3 (lower is better)
Translates to: QLHGRQCITLMT*AGPGYYHIPTD
Trigger: ATCTGTGGGAATGTGGTAGTACCCAGGGCCAGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp GGATCTGTGTGCCTAATCTTCAGCTTGTCTCACTGGTaGTGGGAGCAGGGAAGGGTGATATGCAAATGGGAC +
Preference number: 3 (lower is better)
Translates to: GSVCLIFSLSHW*WEQGRVICKWD
Trigger: GTCCCATTTGCATATCACCCTTCCCTGCTCCCACCACCAGTGAGACAAGCTGAAGATTAGGCACACAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCAAAGTTGGTCTTGCCTaGGGCCAGAAAACAAGACGC +
Preference number: 3 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSKVGLA*GQKTRR
Trigger: GCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTT...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGCACAGAACTCTCTGGTaGAAGTCTCTTGTCCCTAAT +
Preference number: 3 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQHRTLW*KSLVPN
Trigger: ATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTG...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp AACATACATAACCGTTATGTGCAGGTTGTACAGGGATaGACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGG +
Preference number: 3 (lower is better)
Translates to: NIHNRYVQVVQG*TTGVLSPGQSW
Trigger: CCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTGTACAACCTGCACATAACGGTTATGTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp TTGTGGATTCTTCTCTTCCTGTGTAAAACCAAATGCTaGGCGCGAGAGGGGAAAGTCTCAGTGGACACAGGG +
Preference number: 3 (lower is better)
Translates to: LWILLFLCKTKC*AREGKVSVDTG
Trigger: CCCTGTGTCCACTGAGACTTTCCCCTCTCGCGCCCAGCATTTGGTTTTACACAGGAAGAGAAGAATCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp ACCAGATACTCTACAGCAAATGGAGAACCCTGGCCATaGTTCCTTCCTGGTCCTCACGTTTGTGATGGGTTG +
Preference number: 3 (lower is better)
Translates to: TRYSTANGEPWP*FLPGPHVCDGL
Trigger: CAACCCATCACAAACGTGAGGACCAGGAAGGAACCATGGCCAGGGTTCTCCATTTGCTGTAGAGTATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAAGAGATCTCGGGGAATaGATCACAGAACTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPRDLGE*ITELSG
Trigger: ACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCT...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp CTGTACCGAGCTCCAGCAACTTCCACTCACTGGGTGTaGAGACACACCTGGATTAACACAAAAGAATGTGGC +
Preference number: 3 (lower is better)
Translates to: LYRAPATSTHWV*RHTWINTKECG
Trigger: GCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTGCTGGAGCTCGGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp GTGACCAGACTGTCAAGGAAGTACATTCAGTGGGTGTaGGGTGTCCACATTCCAGGCTCACGTGTAGATATA +
Preference number: 3 (lower is better)
Translates to: VTRLSRKYIQWV*GVHIPGSRVDI
Trigger: TATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCACTGAATGTACTTCCTTGACAGTCTGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp AAGCTTCAGATGCCCCATGAATTGCCAAGCTCTCTGTaGCACTATGGTGTCCTTGCCCAAGGCAGTTATTTC +
Preference number: 3 (lower is better)
Translates to: KLQMPHELPSSL*HYGVLAQGSYF
Trigger: GAAATAACTGCCTTGGGCAAGGACACCATAGTGTCACAGAGAGCTTGGCAATTCATGGGGCATCTGAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp TTCTGGGAAGAAATAATGTATGGTGCCCCAACTACATaGCAGGCAGTGCATAACCTTAATGACGTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: FWEEIMYGAPTT*QAVHNLNDVGW
Trigger: CCAGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACATTATTTCTTCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp TGTATCACCAGATACTCTACAGCAAATGGAGAACCCTaGCCATGGTTCCTTCCTGGTCCTCACGTTTGTGAT +
Preference number: 3 (lower is better)
Translates to: CITRYSTANGEP*PWFLPGPHVCD
Trigger: ATCACAAACGTGAGGACCAGGAAGGAACCATGGCCAGGGTTCTCCATTTGCTGTAGAGTATCTGGTGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGTGCCTAATCTTCAGCTaGTCTCACTGGTGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVCLIFS*SHWWWE
Trigger: CTCCCACCACCAGTGAGACAAGCTGAAGATTAGGCA...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp GCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTaGTCACAGAACTCTCTGGTTGAAGTCTCTTGTCCC +
Preference number: 3 (lower is better)
Translates to: AENSEDAEISGN*SQNSLVEVSCP
Trigger: GGGACAAGAGACTTCAACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR TCA 72 bp AAACTGAGAGTGCCACTGCTCGTTCCTGTCAAGCACTaGGCTTCCCTGATTCTAAGCAGAAAACTCAGAAGA +
Preference number: 3 (lower is better)
Translates to: KLRVPLLVPVKH*ASLILSRKLRR
Trigger: TCTTCTGAGTTTTCTGCTTAGAATCAGGGAAGCTCAGTGCTTGACAGGAACGAGCAGTGGCACTCTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATTGTGATGGGTTGACCTaGAGGCTGGTCTCCCAGAAA +
Preference number: 3 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYCDGLT*RLVSQK
Trigger: TTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACA...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGGACACTATGGTGTCCTaGCCCAAGGCAGTTATTTCC +
Preference number: 3 (lower is better)
Translates to: CSLSSYFHRHNINISDAEDTMVS*PKAVIS
Trigger: GGAAATAACTGCCTTGGGCAAGGACACCATAGTGTC...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATACCGTTATGTGCAGGTaGTACAGGGATGCACTACTG +
Preference number: 3 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYTVMCR*YRDALL
Trigger: CAGTAGTGCATCCCTGTACAACCTGCACATAACGGT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATTCCAGGCATTGGTCTTaGGGGGTTTCTTCCTCTCAT +
Preference number: 3 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYSRHWS*GVSSSH
Trigger: ATGAGAGGAAGAAACCCCCAAAGACCAATGCCTGGA...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp ATGCAGAGATCTCGGGGAATTGATCACAGAACTCTCTaGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTC +
Preference number: 3 (lower is better)
Translates to: MQRSRGIDHRTL*LKSLVPNLVIV
Trigger: GACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGAGAAGAAAGTTGGTCTaGCCTTGGGCCAGAAAACAA +
Preference number: 3 (lower is better)
Translates to: CSLSSYFHRHNINISDAERRKLV*PWARKQ
Trigger: TTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCT...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CCA 72 bp CCAGTAACACTTCATTCCTGTTCTATCCACTCTTATTaGCAGAGGAAAGATGAACTGGCTGATGACTCTTTA +
Preference number: 3 (lower is better)
Translates to: PVTLHSCSIHSY*QRKDELADDSL
Trigger: TAAAGAGTCATCAGCCAGTTCATCTTTCCTCTGCCAATAAGAGTGGATAGAACAGGAATGAAGTGTTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTATTCTGAGGCATAACTaGAGGTTGCTATTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTILRHN*RLLLSP
Trigger: AGGAGACAATAGCAACCTCAAGTTATGCCTCAGAAT...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR-3UTR CAA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCAGAGATCTCGGGGAATaGATCACAGAACTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: TNTILYFSRHFTISSISPRDLGE*ITELSG
Trigger: ACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCT...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR GCA 72 bp ACTCTAATGTTACAATGTCAGTCCTCTAGGAGAGCTTaGAGAATTGGCTTTTTCAGCACCTCTCAAAGTTTA +
Preference number: 3 (lower is better)
Translates to: TLMLQCQSSRRA*RIGFFSTSQSL
Trigger: TAAACTTTGAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTCCTAGAGGACTGACATTGTAACATTAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGGAAGCCGCTCTCCGTaGTGGCTGAGCGCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCGSRSP*WLSAPG
Trigger: GCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGAGTGGAAGTGCAGGTaGTTGGGCAGCGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCEWKCR*LGSARR
Trigger: CCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGGGGTTCTGGTGCCTCTaGCTGGACCAGGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVGFWCL*LDQEGE
Trigger: CTCCCCCTCCTGGTCCAGGCAGAGGCACCAGAACCC...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGCGTTCTCCTGGGAGTTaGAGCGAGGCATCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVRSPGS*SEASAG
Trigger: GCCGGCGGATGCCTCGCTCCAACTCCCAGGAGAACG...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTCGTTCTCCTGGGAGTTaGAGCGAGGCATCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCRSPGS*SEASAG
Trigger: GCCGGCGGATGCCTCGCTCCAACTCCCAGGAGAACG...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGTGCTGCTGCGGCGGCTaGTGCTGTTCCTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVCCCGG*CCSSST
Trigger: GGTGGAAGAGGAACAGCAGCAGCCGCCGCAGCAGCA...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCGCTCGTAGCTGTCCATaGGCGGGTAGGGCGCGAACT +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCARSCP*AGRART
Trigger: AGTTCGCGCCCTACCCGCGCATGGACAGCTACGAGC...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCACGCTCCTCTTCCTCCTaGCCGAGCTGGGCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TATPLGRGTREGLCRWFSRSSSS*PSWARR
Trigger: CCTCCGCGCCCAGCTCGGCCAGGAGGAAGAGGAGCG...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGCCGTCCATCGGCCTCTaGTCGTCACAGTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVPSIGL*SSQSLV
Trigger: CACCAGGGACTGTGACGACCAGAGGCCGATGGACGG...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR TCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGTCCACTGGGCTTGCCTaGCAGCTGGGTCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRSTGLA*QLGPRA
Trigger: GGCCCGCGGACCCAGCTGTCAGGCAAGCCCAGTGGA...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR TCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGTTCTCCCTCAAGCAGTaGCAGCCCACCCCCTGGACA +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVFSLKQ*QPTPWT
Trigger: TGTCCAGGGGGTGGGCTGTCACTGCTTGAGGGAGAA...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCGTGGCACTGCCCAGGTaGCTAGGGACAGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCVALPR*LGTDRH
Trigger: ATGCCTGTCTGTCCCTAGGCACCTGGGCAGTGCCAC...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTTCACGGTGGGGAGGATaGATCCCCAGCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCSRWGG*IPSQTP
Trigger: TGGAGTCTGGCTGGGGATCCATCCTCCCCACCGTGA...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCGCATGCCACCGCGTGTaGCCGCGGTCAGATGTAAAC +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCACHRV*PRSDVN
Trigger: GTTTACATCTGACCGCGGCCACACGCGGTGGCATGC...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCCCTCCAGGATGGTCCTaGGTCAGTACCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCPPGWS*VSTRWV
Trigger: CACCCACCTGGTACTGACCCAGGACCATCCTGGAGG...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGGACGTGGGCTGGCCCTaGGTACTACCACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVDVGWP*VLPHSH
Trigger: GTGGGAATGTGGTAGTACCCAGGGCCAGCCCACGTC...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCTCCCCTGGCCAGTCGTaGGCGGGCCTCTGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCSPGQS*AGLCGT
Trigger: AGTGCCACAGAGGCCCGCCCACGACTGGCCAGGGGA...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGAGGCAGGATGGGTTCTaGTGCCTCTGCCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVRQDGF*CLCLDQ
Trigger: CTGGTCCAGGCAGAGGCACCAGAACCCATCCTGCCT...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAGGCGTGCTCGGCCTCTaGCTGCTCCGTGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: TATPLGRGTREGLCRWFSGVLGL*LLRVLL
Trigger: GAGGAGTACACGGAGCAGGCAGAGGCCGAGCACGCC...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCGCTTCCACGTTCTCCTaGGAGTTGGAGCGAGGCATC +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCASTFS*ELERGI
Trigger: GATGCCTCGCTCCAACTCCCAGGAGAACGTGGAAGC...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCTGGGTCAGTACCAGGTaGGTGCTGGCTGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCWVSTR*VLAALH
Trigger: ATGGAGAGCAGCCAGCACCCACCTGGTACTGACCCA...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGTGCTTTAAGCCAAAGTaGTGCTGGAGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVCFKPK*CWRGWA
Trigger: GGCCCAGCCCCTCCAGCACCACTTTGGCTTAAAGCA...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGTGGAGTTCTGTCCCCTaGCCAGTCGTGGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLWSSVP*PVVGGP
Trigger: AGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCA...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCTGGAGTTCTGTCCCCTaGCCAGTCGTGGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCWSSVP*PVVGGP
Trigger: AGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCA...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGACGGCTTCCTGGGCCTaGATCATGCGCACGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVTASWA*IMRTFL
Trigger: CAAAAACGTGCGCATGATGCAGGCCCAGGAAGCCGT...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTTTTAAGCCAAAGTGGTaGTGGAGGGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCFKPKW*WRGWAS
Trigger: TGAGGCCCAGCCCCTCCAGCACCACTTTGGCTTAAA...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGGGAAGTGCAGGTGGTTaGGCAGCGCGCGGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVGSAGG*AARGGA
Trigger: CGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCC...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCTTTCCCATCCTGGGATaGGTGGGACGCTTCCACGTT +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCFPILG*VGRFHV
Trigger: AACGTGGAAGCGTCCCACCCATCCCAGGATGGGAAA...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGGACGATCTTCTCGTaGGGGGTGGCCACGACGCTC +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPWTIFS*GVATTL
Trigger: GAGCGTCGTGGCCACCCCCCACGAGAAGATCGTCCA...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGAAGCCAAAGTGGTGCTaGAGGGGCTGGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLKPKWC*RGWASA
Trigger: CGCTGAGGCCCAGCCCCTCCAGCACCACTTTGGCTT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGACAGGGATGCACTACTaGAGTTCTGTCCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVTGMHY*SSVPWP
Trigger: TGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTGT...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTGCTCTCCGTGCTGGCTaGGCGCGCCAGGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAALRAG*ARQAFP
Trigger: GGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGC...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR TCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGACAGGGTCACTGGGGTaGAGAGATGTGCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVTGSLG*RDVLDD
Trigger: GTCATCAAGCACATCTCTTCACCCCAGTGACCCTGT...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGTTGCTCCACTGGGCTTaGCTGACAGCTGGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRLLHWA*LTAGSA
Trigger: CGCGGACCCAGCTGTCAGGCAAGCCCAGTGGAGCAA...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGTGCGTGGCCTCGGCGTaGTCGGCCTCTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEECVASA*SASACS
Trigger: GGAGCAGGCAGAGGCCGAGCACGCCGAGGCCACGCA...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAGGCTCTGCGAGCTCATaGTCTGCTTCACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGGSASS*SASPRP
Trigger: TGGCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCC...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGCATGTCCTCGGCTaGCTTGTCGAGGCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGRHVLG*LVEALR
Trigger: TCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCT...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGAGGAGAGTCCTCCATaGATGCCACCGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGREESPP*MPPRVA
Trigger: GGCCACACGCGGTGGCATGCATGGAGGACTCTCCTC...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCACAGGTGGGTGCTGGCTaGTCTCCATCCTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: TATPLGRGTREGLCRWFSQVGAG*SPSSRE
Trigger: CTCCCTTGAGGATGGAGAGCAGCCAGCACCCACCTG...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGGCCTGCCTGGCCACCTaGCAGGGAAGGGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVACLAT*QGRGLP
Trigger: TGGAAGGCCCCTTCCCTGGCAGGTGGCCAGGCAGGC...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGATTGCACCTGCAGCTTaGCTTCTTGGGAACAGTCCC +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVIAPAA*LLGNSP
Trigger: GGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAAT...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCAGGATGGGTTCTGGTaGCTCTGCCTGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLQDGFW*LCLDQE
Trigger: CTCCTGGTCCAGGCAGAGGCACCAGAACCCATCCTG...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGGCACTCCTAGGAGCCTaGTCTGGCGAGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLALLGA*SGEGRC
Trigger: ACACCTTCCCTCGCCAGAGCAGGCTCCTAGGAGTGC...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGTACATTCAGTGGGTGTaGGGTGTCCACATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVYIQWV*GVHIPG
Trigger: GCCTGGAATGTGGACACCGCACACCCACTGAATGTA...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCTGCTTACGGCTTCCTaGGCCTGCATCATGCGCACG +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCLLTAS*ACIMRT
Trigger: CGTGCGCATGATGCAGGCCCAGGAAGCCGTAAGCAG...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGCCGCAATGTAGGAAATaGTCCTCAGAGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVPQCRK*SSEGGP
Trigger: TGGACCACCCTCTGAGGACCATTTCCTACATTGCGG...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCCATCCTGGGATGGGTaGGACGCTTCCACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCPSWDG*DASTFS
Trigger: GGAGAACGTGGAAGCGTCCCACCCATCCCAGGATGG...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGCCCTGAGGAATTCCTaGTATGCCACGCTAAATGCC +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCALRNS*YATLNA
Trigger: GGCATTTAGCGTGGCATACCAGGAATTCCTCAGGGC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCGCATTGGAGAGAATGTaGACGATCTTCTCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCALERM*TIFSWG
Trigger: CCCCCACGAGAAGATCGTCCACATTCTCTCCAATGC...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGACCTCCAGGATGGTCCTaGGTCAGTACCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGPPGWS*VSTRWV
Trigger: CACCCACCTGGTACTGACCCAGGACCATCCTGGAGG...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTCCATCCCAGAGCCCCTaGCCCCACCGGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAPSQSP*PHRVPL
Trigger: GAGTGGCACCCGGTGGGGCCAGGGGCTCTGGGATGG...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCACCATCCCAGAGCCCCTaGCCCCACCGGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPPSQSP*PHRVPL
Trigger: GAGTGGCACCCGGTGGGGCCAGGGGCTCTGGGATGG...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGACCCACTTCAGCTGGGTaGACCTGTACCGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGPTSAG*TCTELQ
Trigger: CTGGAGCTCGGTACAGGTCCACCCAGCTGAAGTGGG...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCGAGGGAAGGTGTCGCTaGAGAAGTGGGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCEGRCR*RSGLQA
Trigger: TGCCTGGAGCCCACTTCTCCAGCGACACCTTCCCTC...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCTCCACTCACTGGGTGTaGAGACACACCTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCSTHWV*RHTWIN
Trigger: GTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGA...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCCCAACAGGTGGCCTGTaGATGCGAGTAAACACATCT +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCPTGGL*MRVNTS
Trigger: AGATGTGTTTACTCGCATTCACAGGCCACCTGTTGG...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCTCTTCCACCTCGGGGTaGTCCAGGTCGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCSSTSG*SRSAST
Trigger: GGTGGAGGCCGACCTGGAGCACCCCGAGGTGGAAGA...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCAGACGCAATTGCACCTaGAGCTTGCCTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCRRNCT*SLPSWE
Trigger: TTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCT...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGCCTGGCCCCACCGGGTaGCACTCTCTGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEPGPTG*HSLQQQ
Trigger: CTGCTGCTGCAGAGAGTGGCACCCGGTGGGGCCAGG...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCAGGGTTCTGGTGCCTCTaGCTGGACCAGGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHAGFWCL*LDQEGE
Trigger: CTCCCCCTCCTGGTCCAGGCAGAGGCACCAGAACCC...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGTCGGCGGTGTCCGTGTaGTTGTGGAAGCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQSAVSV*LWKPLS
Trigger: GGAGAGCGGCTTCCACAACCACACGGACACCGCCGA...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCTTTTCCCATCCTaGGATGGGTGGGACGCTTCC +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPCLFPS*DGWDAS
Trigger: GGAAGCGTCCCACCCATCCCAGGATGGGAAAAGGCA...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGTGTAAAACCAAATGCTaGGCGCGAGAGGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVCKTKC*AREGKV
Trigger: GACTTTCCCCTCTCGCGCCCAGCATTTGGTTTTACA...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGCCTTCAAAGAAGTCCTaGGGAGCTTTACGGACCATC +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVPSKKS*GALRTI
Trigger: GATGGTCCGTAAAGCTCCCCAGGACTTCTTTGAAGG...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGGGAGAACCCTGGCCATaGTTCCTTCCTGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLGEPWP*FLPGPH
Trigger: GTGAGGACCAGGAAGGAACCATGGCCAGGGTTCTCC...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCGTGTGCGGGAGGTGTTaGTGCCCACAGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSVCGRC*CPQGEG
Trigger: CCCCTCACCCTGTGGGCACCAACACCTCCCGCACAC...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGTTCTCCCTCAAGCAGTaGCAGCCCACCCCCTGGACA +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQFSLKQ*QPTPWT
Trigger: TGTCCAGGGGGTGGGCTGTCACTGCTTGAGGGAGAA...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTAAGGCTCCTGATGCCTaGAATACCACCAGTAACACT +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCKAPDA*NTTSNT
Trigger: AGTGTTACTGGTGGTATTTCAGGCATCAGGAGCCTT...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCTGGGCCTGCATCATaGGCACGTTTTTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLPGPAS*ARFWKE
Trigger: CTCCTTCCAAAAACGTGCGCATGATGCAGGCCCAGG...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGTCCAGGGGATCTGTGTaGCTAATCTTCAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVSRGSV*LIFSLS
Trigger: AGACAAGCTGAAGATTAGGCACACAGATCCCCTGGA...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCAGCGTTTGGGAAGGCTaGCCTGTACATAGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPSVWEG*PVHSLP
Trigger: GGGAAGGCTATGTACAGGGCAGCCTTCCCAAACGCT...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCCCAAGTGGTTCATGGTaGGAGTCGGAACGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPPSGSW*ESERLG
Trigger: TCCTAGCCGTTCCGACTCCCACCATGAACCACTTGG...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGAAGTTGGTCTTGCCTTaGGCCAGAAAACAAGACGCA +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVKLVLP*ARKQDA
Trigger: TGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTT...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTAGCAGAGAAGAAAGTTaGTCTTGCCTTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCSREES*SCLGPE
Trigger: TTCTGGCCCAAGGCAAGACCAACTTTCTTCTCTGCT...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGGCAAGAGGGTGTTTATaGACCACATCTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVARGCL*TTSGDS
Trigger: AGAATCCCCAGATGTGGTCCATAAACACCCTCTTGC...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCAGAACCCACTTCAGCTaGGTGGACCTGTACCGAGCT +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPRTHFS*VDLYRA
Trigger: AGCTCGGTACAGGTCCACCCAGCTGAAGTGGGTTCT...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCCTGAAATGCTCACACTaGAGAAAAGGCAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCLKCSH*RKGRMG
Trigger: ACCCATCCTGCCTTTTCTCCAGTGTGAGCATTTCAG...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCTTCCATTCTGGACGCTaGAACCGAGCTGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCFHSGR*NRAGSE
Trigger: TTCGCTACCAGCTCGGTTTCAGCGTCCAGAATGGAA...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCACTGATGGTGGCTCCCTaGAATGCTCACACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TATPLGRGTREGLCRWFSLMVAP*NAHTGE
Trigger: TTCTCCAGTGTGAGCATTTCAGGGAGCCACCATCAG...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGGGAGGGAGGGACCAGTaGCCAGACTGTCAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQGGRDQ*PDCQGS
Trigger: ACTTCCTTGACAGTCTGGTCACTGGTCCCTCCCTCC...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGACTGTCCGATGGACTGTaGAATCAGCTGAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGLSDGL*NQLSIL
Trigger: GAGGATGCTCAGCTGATTGCACAGTCCATCGGACAG...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCCAGTGGACACAGGGATaGAGCACGAGAAACACAACC +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPQWTQG*STRNTT
Trigger: GGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTG...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGGCTTCCACGTTCTCCTaGGAGTTGGAGCGAGGCATC +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQASTFS*ELERGI
Trigger: GATGCCTCGCTCCAACTCCCAGGAGAACGTGGAAGC...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCCCATCCTGGGATGGGTaGGACGCTTCCACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCPSWDG*DASTFS
Trigger: GGAGAACGTGGAAGCGTCCCACCCATCCCAGGATGG...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCTCGTTGTACATGTCCTaGGTATTGAGCAGGTCACTA +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCSLYMS*VLSRSL
Trigger: TAGTGACCTGCTCAATACCCAGGACATGTACAACGA...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGCCTGTACATCGCGGCTaGCATTGTCTTCATATGAAT +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVPVHRG*HCLHMN
Trigger: ATTCATATGAAGACAATGCCAGCCGCGATGTACAGG...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGGAAAGCCCTCCAGGATaGTCCTGGGTCAGTACCAGG +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQESPPG*SWVSTR
Trigger: CCTGGTACTGACCCAGGACCATCCTGGAGGGCTTTC...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCAGACGTGGGCTGGCCCTaGGTACTACCACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHADVGWP*VLPHSH
Trigger: GTGGGAATGTGGTAGTACCCAGGGCCAGCCCACGTC...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCTTAATGACGTGGGCTaGCCCTGGGTACTACCACAT +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLLNDVG*PWVLPH
Trigger: ATGTGGTAGTACCCAGGGCCAGCCCACGTCATTAAG...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAGGTGCCCCAACTACATaGCAGGCAGTGCATAACCTT +
Preference number: 4 (lower is better)
Translates to: TATPLGRGTREGLCRWFSGAPTT*QAVHNL
Trigger: AAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACC...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGATCACAGAACTCTCTaGTTGAAGTCTCTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCDHRTL*LKSLVP
Trigger: AGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGATACTCTACAGCAAATaGAGAACCCTGGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVILYSK*RTLAMV
Trigger: AACCATGGCCAGGGTTCTCCATTTGCTGTAGAGTAT...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGGAGAGCTTGCAGAATTaGCTTTTTCAGCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVESLQN*LFQHLS
Trigger: TGAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTC...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCAGGCAGGATGGGTTCTaGTGCCTCTGCCTGGACCAG +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSRQDGF*CLCLDQ
Trigger: CTGGTCCAGGCAGAGGCACCAGAACCCATCCTGCCT...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGGAGGGAAGGTGTCGCTaGAGAAGTGGGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVEGRCR*RSGLQA
Trigger: TGCCTGGAGCCCACTTCTCCAGCGACACCTTCCCTC...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGATCACAACCCCAAACTaGATGACTGTGGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLITTPN*MTVATG
Trigger: TCCCGTGGCCACAGTCATCCAGTTTGGGGTTGTGAT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCAGCCAAGCTTTTTCTTaGCTCTTTATTAGTGGACGC +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCSQAFS*LFISGR
Trigger: GCGTCCACTAATAAAGAGTCAAGAAAAAGCTTGGCT...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTTCAGATGCCCCATaGATTGCCAAGCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRASDAP*IAKLSV
Trigger: CACAGAGAGCTTGGCAATTCATGGGGCATCTGAAGC...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCGTTCCTGTCAAGCACTaGGCTTCCCTGATTCTAAGC +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPVPVKH*ASLILS
Trigger: GCTTAGAATCAGGGAAGCTCAGTGCTTGACAGGAAC...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGCTGTGGCTGCTGAGGTaGCCATACCTAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVLWLLR*PYLGSL
Trigger: GAGTGAGCCTAGGTATGGTCACCTCAGCAGCCACAG...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGCAACCCCAAACTGGATaGCTGTGGCCACGGGACGGA +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEQPQTG*LWPRDG
Trigger: TCCGTCCCGTGGCCACAGTCATCCAGTTTGGGGTTG...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGTGGGGTGAAGAGATGTaGTTGATGACTCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLWGEEM*LMTLHP
Trigger: TGGGTGCAGAGTCATCAAGCACATCTCTTCACCCCA...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCGAGGAATTCCTGGTATaGCACGCTAAATGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCEEFLV*HAKCLS
Trigger: GGACAGGCATTTAGCGTGGCATACCAGGAATTCCTC...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGTCCAGGAGGAGGATaGTTTAAGCCAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGSPGGG*FKPKWC
Trigger: GCACCACTTTGGCTTAAAGCATCCTCCTCCTGGACT...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGCCTCCAAGTGGTTCATaGTGGGAGTCGGAACGGCTA +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQPPSGS*WESERL
Trigger: TAGCCGTTCCGACTCCCACCATGAACCACTTGGAGG...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGCTTCCACAGGGTCACTaGGGTGAAGAGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRLPQGH*GEEMCL
Trigger: CAAGCACATCTCTTCACCCCAGTGACCCTGTGGAAG...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTTCATGCGCACGTTTTTaGAAGGAGTTTTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCSCARF*KEFCLR
Trigger: TCTCAGACAAAACTCCTTCCAAAAACGTGCGCATGA...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAATGGTCCTCAGAGGGTaGTCCATCATTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TATPLGRGTREGLCRWFSMVLRG*SIIVSC
Trigger: ACAGGAGACAATGATGGACCACCCTCTGAGGACCAT...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGTTTCCCATCCTGGGATaGGTGGGACGCTTCCACGTT +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQFPILG*VGRFHV
Trigger: AACGTGGAAGCGTCCCACCCATCCCAGGATGGGAAA...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAGCATGCCACCGCGTGTaGCCGCGGTCAGATGTAAAC +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPACHRV*PRSDVN
Trigger: GTTTACATCTGACCGCGGCCACACGCGGTGGCATGC...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGTAAAGAGGTCCTTGTaGATTCTTCTCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCVKRSL*ILLFLC
Trigger: ACACAGGAAGAGAAGAATCCACAAGGACCTCTTTAC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGGTAAAGAGGTCCTTGTaGATTCTTCTCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVVKRSL*ILLFLC
Trigger: ACACAGGAAGAGAAGAATCCACAAGGACCTCTTTAC...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCGGAAGAAATAATGTATaGTGCCCCAACTACATGGCA +
Preference number: 4 (lower is better)
Translates to: PKAEPPAHPGGAATAALCGRNNV*CPNYMA
Trigger: TGCCATGTAGTTGGGGCACCATACATTATTTCTTCC...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGGGAAGAAATAATGTATaGTGCCCCAACTACATGGCA +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVGRNNV*CPNYMA
Trigger: TGCCATGTAGTTGGGGCACCATACATTATTTCTTCC...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCATCCTTCCCAGACTCCTaGGATGTGTGTTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHASFPDS*DVCSAG
Trigger: CCCTGCCGAACACACATCCCAGGAGTCTGGGAAGGA...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGAGGGACAGACAGGCATaGGCCCCTACGATGATTTTC +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRRDRQA*APTMIF
Trigger: GAAAATCATCGTAGGGGCCCATGCCTGTCTGTCCCT...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGAGAACCCACTTCAGCTaGGTGGACCTGTACCGAGCT +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQRTHFS*VDLYRA
Trigger: AGCTCGGTACAGGTCCACCCAGCTGAAGTGGGTTCT...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCCAGGCATTGGTCTTTaGGGGTTTCTTCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCPGIGL*GFLPLM
Trigger: CATGAGAGGAAGAAACCCCCAAAGACCAATGCCTGG...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTACATCTACACTGAACTaGGACGGAAGCATAAATATG +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCTSTLN*DGSINM
Trigger: CATATTTATGCTTCCGTCTCAGTTCAGTGTAGATGT...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCATTTTCCAAGGCTCCTaGTGCCTGAAATACCACCAG +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPIFQGS*CLKYHQ
Trigger: CTGGTGGTATTTCAGGCATCAGGAGCCTTGGAAAAT...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAGGAGGGAGGGACCAGTaGCCAGACTGTCAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPGGRDQ*PDCQGS
Trigger: ACTTCCTTGACAGTCTGGTCACTGGTCCCTCCCTCC...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCTTCATGGCTTCCTCGTaGTCCAGCGAGTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCFMASS*SSEWKC
Trigger: GCACTTCCACTCGCTGGAGCACGAGGAAGCCATGAA...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGGCCTTGTCGAGGCTCTaGGAGCTCATGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEALSRL*ELMLCF
Trigger: GAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGC...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGAGTCCAGGAGGAGGATaGTTTAAGCCAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRSPGGG*FKPKWC
Trigger: GCACCACTTTGGCTTAAAGCATCCTCCTCCTGGACT...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTAGGCTCACTCCCTTaGCCCAGTGGTAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSLGSLP*PSGSGK
Trigger: TTTCCCACTACCACTGGGGCAAGGGAGTGAGCCTAG...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTGCCACAGCAGCTCTGTaGCCTCACAGCGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAATAAL*PHSVWE
Trigger: TTCCCAAACGCTGTGAGGGCACAGAGCTGCTGTGGC...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGACAGTCCTCACACACTaGCTTGATGGAGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRTVLTH*LDGGEE
Trigger: TTCTTCCCCTCCATCAAGGCAGTGTGTGAGGACTGT...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGGGCTTGCCTGACAGCTaGGTCCGCGGGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEGLPDS*VRGPAG
Trigger: TCCCGCGGGCCCGCGGACCCAGCTGTCAGGCAAGCC...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAGCAGACCCCTCCAAGTaGTTCATGGTGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPADPSK*FMVGVG
Trigger: TCCGACTCCCACCATGAACCACTTGGAGGGGTCTGC...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCGCGAACGGATGGTCCTaGTTTTCACCTCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCANGWS*FSPPRW
Trigger: CCATCGAGGAGGTGAAAACCAGGACCATCCGTTCGC...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGATCCACTTCAGTCATTaGCTGAGATTCGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLIHFSH*LRFAFR
Trigger: CCTGAAGGCGAATCTCAGCCAATGACTGAAGTGGAT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTTGCCTTTTCCCATCCTaGGATGGGTGGGACGCTTCC +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWACLFPS*DGWDAS
Trigger: GGAAGCGTCCCACCCATCCCAGGATGGGAAAAGGCA...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGATCCGACTTGGAGAAGTaGATCAGGTCATCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGSDLEK*IRSSLY
Trigger: GTACAACGATGACCTGATCCACTTCTCCAAGTCGGA...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGATCTCCCCAACAGCATTaGAGAGAATGTGGACGATCT +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGSPQQH*RECGRS
Trigger: AGATCGTCCACATTCTCTCCAATGCTGTTGGGGAGA...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCATGGGTCAGTACCAGGTaGGTGCTGGCTGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPWVSTR*VLAALH
Trigger: ATGGAGAGCAGCCAGCACCCACCTGGTACTGACCCA...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCGAAGTCTGCACCTCCTaGGAAGGGAGGATTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCEVCTS*EGRILP
Trigger: AGGGAGAATCCTCCCTTCCCAGGAGGTGCAGACTTC...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGTTCAGCTTGTCTCACTaGTGGTGGGAGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVFSLSH*WWEQGR
Trigger: CCTTCCCTGCTCCCACCACCAGTGAGACAAGCTGAA...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAAGTTGGTCTTGCCTTaGGCCAGAAAACAAGACGCA +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGKLVLP*ARKQDA
Trigger: TGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTT...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGTCCCCTGGCCAGTCGTaGGCGGGCCTCTGTGGCACT +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVSPGQS*AGLCGT
Trigger: AGTGCCACAGAGGCCCGCCCACGACTGGCCAGGGGA...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCACAGGGATGCACTACTaGAGTTCTGTCCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSTGMHY*SSVPWP
Trigger: TGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTGT...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCAGGAGAAAAGGCAGGATaGGTTCTGGTGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHAGEKAG*VLVPLP
Trigger: AGGCAGAGGCACCAGAACCCATCCTGCCTTTTCTCC...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGACTGAAATGCTCACACTaGAGAAAAGGCAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGLKCSH*RKGRMG
Trigger: ACCCATCCTGCCTTTTCTCCAGTGTGAGCATTTCAG...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCGTGTCGCTGGAGAAGTaGGCTCCAGGCATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCVSLEK*APGIGL
Trigger: AAGACCAATGCCTGGAGCCCACTTCTCCAGCGACAC...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCAGGTAGTAGGTTACTCTaGGACTCCCTGAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHAGSRLL*DSLKAV
Trigger: CACCGCCTTCAGGGAGTCCCAGAGTAACCTACTACC...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAGTGTGCGGGAGGTGTTaGTGCCCACAGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAVCGRC*CPQGEG
Trigger: CCCCTCACCCTGTGGGCACCAACACCTCCCGCACAC...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGAAGTACATTCAGTaGGTGTGCGGTGTCCACATT +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGRKYIQ*VCGVHI
Trigger: AATGTGGACACCGCACACCCACTGAATGTACTTCCT...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 72 bp TTGGGCCAGAAAACAAGACGCAATTGCACCTGCAGCTaGCCTTCTTGGGAACAGTCCCTCCTTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LGQKTRRNCTCS*PSWEQSLLPRL
Trigger: GAGTCTGGGAAGGAGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 72 bp CCGCCTAGTGGCCCTGAGCAGAGAAGAAAGTTGGTCTaGCCTTGGGCCAGAAAACAAGACGCAATTGCACCT +
Preference number: 4 (lower is better)
Translates to: PPSGPEQRRKLV*PWARKQDAIAP
Trigger: AGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCTCTGCTCAGGGCCACTAGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGGAAGGTCTGGTCTTCTaGTTAACACGGTGGTCACCG +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVEGLVF*LTRWSP
Trigger: CGGTGACCACCGTGTTAATCAGAAGACCAGACCTTC...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCAGAAGGTCTGGTCTTCTaGTTAACACGGTGGTCACCG +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHAEGLVF*LTRWSP
Trigger: CGGTGACCACCGTGTTAATCAGAAGACCAGACCTTC...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGTCCACTCACTGGGTGTaGAGACACACCTGGATTAAC +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQSTHWV*RHTWIN
Trigger: GTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGA...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCGGACGCTCCAGGTCCTaGTCGGCCTCAGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTGRSRS*SASGMS
Trigger: GGACATGCCTGAGGCCGAGCAGGACCTGGAGCGTCC...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGAGATGCCCCATGAATTaGCAAGCTCTCTGTGACACT +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRRCPMN*QALCDT
Trigger: AGTGTCACAGAGAGCTTGGCAATTCATGGGGCATCT...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCATTGCACCTGCAGCTTaGCTTCTTGGGAACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCIAPAA*LLGNSP
Trigger: GGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAAT...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCGGTGGCTCCCTGAAATaGTCACACTGGAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSGGSLK*SHWRKG
Trigger: GCCTTTTCTCCAGTGTGAGCATTTCAGGGAGCCACC...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCTACATTCAGTGGGTGTaGGGTGTCCACATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSYIQWV*GVHIPG
Trigger: GCCTGGAATGTGGACACCGCACACCCACTGAATGTA...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCAGCCGCTCTCCGTGCTaGCTGAGCGCGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTSRSPC*LSAPGI
Trigger: AATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCT...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGATCCACTTCAGTCATTaGCTGAGATTCGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRIHFSH*LRFAFR
Trigger: CCTGAAGGCGAATCTCAGCCAATGACTGAAGTGGAT...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCTCACTATACTCCTTCTaGCTGAGATCTTCGGGGTTA +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCSLYSF*LRSSGL
Trigger: TAACCCCGAAGATCTCAGCCAGAAGGAGTATAGTGA...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCCTTAATGACGTGGGCTaGCCCTGGGTACTACCACAT +
Preference number: 4 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCLNDVG*PWVLPH
Trigger: ATGTGGTAGTACCCAGGGCCAGCCCACGTCATTAAG...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCTTTCCCCTTTTATCCTaGGGTGAGAAGGCTCGTATT +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCFPLLS*GEKARI
Trigger: AATACGAGCCTTCTCACCCCAGGATAAAAGGGGAAA...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGCTCTCTGTGACACTATaGTGTCCTTGCCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVLSVTL*CPCPRQ
Trigger: CTGCCTTGGGCAAGGACACCATAGTGTCACAGAGAG...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAATACTCTACAGCAAATaGAGAACCCTGGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGILYSK*RTLAMV
Trigger: AACCATGGCCAGGGTTCTCCATTTGCTGTAGAGTAT...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 72 bp AGTTGGTCTTGCCTTGGGCCAGAAAACAAGACGCAATaGCACCTGCAGCTTGCCTTCTTGGGAACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SWSCLGPENKTQ*HLQLAFLGTVP
Trigger: AGGGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 72 bp GGTAGTAGGTTACTCTGGGACTCCCTGAAGGCGGTGTaGATGGGCAATGTTCAGAAAGCAAACCCGTGCACA +
Preference number: 4 (lower is better)
Translates to: GSRLLWDSLKAV*MGNVQKANPCT
Trigger: TGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACACCGCCTTCAGGGAGTCCCAGAGTAACCTACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTTTCCATTCTGGACGCTaGAACCGAGCTGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAFHSGR*NRAGSE
Trigger: TTCGCTACCAGCTCGGTTTCAGCGTCCAGAATGGAA...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAGGTTTTAGGCACTGCTaGATCAGCTGCTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPGFRHC*ISCFAA
Trigger: GGCAGCAAAGCAGCTGATTCAGCAGTGCCTAAAACC...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGGGTTTTAGGCACTGCTaGATCAGCTGCTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEGFRHC*ISCFAA
Trigger: GGCAGCAAAGCAGCTGATTCAGCAGTGCCTAAAACC...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGAAGGCTCCTGATGCCTaGAATACCACCAGTAACACT +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQKAPDA*NTTSNT
Trigger: AGTGTTACTGGTGGTATTTCAGGCATCAGGAGCCTT...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCACATGGGCCCCTACGATaGTTTTCCAAGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPHGPLR*FSKAPD
Trigger: ATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATG...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCACCAAGGGGGAGGAGCTaGCAGGAGACGGAGAATCTC +
Preference number: 4 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAPRGRS*QETENL
Trigger: GAGATTCTCCGTCTCCTGGCAGCTCCTCCCCCTTGG...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTGTATGCCACGCTAAATaGCTGTCCGATGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAVCHAK*LSDGLC
Trigger: GCACAGTCCATCGGACAGGCATTTAGCGTGGCATAC...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTTCCGCAGGGCCACCATaGATCATGTTGGCAATGATC +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWASAGPP*IMLAMI
Trigger: GATCATTGCCAACATGATGCATGGTGGCCCTGCGGA...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGAGGAGAGTCCTCCATaGATGCCACCGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVEESPP*MPPRVA
Trigger: GGCCACACGCGGTGGCATGCATGGAGGACTCTCCTC...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGCTACATGGCAGGCAGTaGATAACCTTAATGACGTGG +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQLHGRQ*ITLMTW
Trigger: CCACGTCATTAAGGTTATGCACTGCCTGCCATGTAG...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCGAAGCAGACAGTACCTaGCTGTGTTTATCTAATGGT +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPEADST*LCLSNG
Trigger: ACCATTAGATAAACACAGGCAGGTACTGTCTGCTTC...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTCCTGGCCCCACCGGGTaGCACTCTCTGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTPGPTG*HSLQQQ
Trigger: CTGCTGCTGCAGAGAGTGGCACCCGGTGGGGCCAGG...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTGGTGGCTCCCTGAAATaGTCACACTGGAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAGGSLK*SHWRKG
Trigger: GCCTTTTCTCCAGTGTGAGCATTTCAGGGAGCCACC...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGTTCTTGTTTATTGTTaGAGCAACTCTTATACAGAC +
Preference number: 4 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCVLVYC*SNSYTD
Trigger: GTCTGTATAAGAGTTGCTGCAACAATAAACAAGAAC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTCTTCCACAGGGTCACTaGGGTGAAGAGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWALPQGH*GEEMCL
Trigger: CAAGCACATCTCTTCACCCCAGTGACCCTGTGGAAG...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCTTTTGGCTAATTTCTaGGCCATCTTGATCCTGCTT +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLLLANF*AILILL
Trigger: AAGCAGGATCAAGATGGCCCAGAAATTAGCCAAAAG...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGTCACTATACTCCTTCTaGCTGAGATCTTCGGGGTTA +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRSLYSF*LRSSGL
Trigger: TAACCCCGAAGATCTCAGCCAGAAGGAGTATAGTGA...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGTGTAAAACCAAATGCTaGGCGCGAGAGGGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVCKTKC*AREGKV
Trigger: GACTTTCCCCTCTCGCGCCCAGCATTTGGTTTTACA...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGGGTGCCCCAACTACATaGCAGGCAGTGCATAACCTT +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEGAPTT*QAVHNL
Trigger: AAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACC...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGGTCTCCTTAATTTTGTaGTTTATGTACTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: RDALLEFCPLASRGRASVVSLIL*FMYYSG
Trigger: GCCAGAATAGTACATAAACCACAAAATTAAGGAGAC...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGAATTGGCGGCAAAAATaGTTCCATCGATCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLNWRQK*FHRSSL
Trigger: AAGACTTGATCGATGGAATCATTTTTGCCGCCAATT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGGGCATTGTCTTCATATaGATCTCCCCAACAGCATTG +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQGIVFI*ISPTAL
Trigger: CAATGCTGTTGGGGAGATTCATATGAAGACAATGCC...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGGTTCCTGTCAAGCACTaGGCTTCCCTGATTCTAAGC +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEVPVKH*ASLILS
Trigger: GCTTAGAATCAGGGAAGCTCAGTGCTTGACAGGAAC...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGCCAACAGGTGGCCTGTaGATGCGAGTAAACACATCT +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEPTGGL*MRVNTS
Trigger: AGATGTGTTTACTCGCATTCACAGGCCACCTGTTGG...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGCTACATGGCAGGCAGTaGATAACCTTAATGACGTGG +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVLHGRQ*ITLMTW
Trigger: CCACGTCATTAAGGTTATGCACTGCCTGCCATGTAG...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGAAAACAAGACGCAATTaGACCTGCAGCTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQKTRRN*TCSLPS
Trigger: AGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTT...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTCAGGTTGTACAGGGATaGACTACTGGAGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAQVVQG*TTGVLS
Trigger: GGACAGAACTCCAGTAGTGCATCCCTGTACAACCTG...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGCTGCTTACGGCTTCCTaGGCCTGCATCATGCGCACG +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVLLTAS*ACIMRT
Trigger: CGTGCGCATGATGCAGGCCCAGGAAGCCGTAAGCAG...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGGCAGGGATCAGCAACTaGGTTTTAGGCACTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEAGISN*VLGTAE
Trigger: TTCAGCAGTGCCTAAAACCCAGTTGCTGATCCCTGC...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGATAACCTTAATGACGTaGGCTGGCCCTGGGTACTAC +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEITLMT*AGPGYY
Trigger: GTAGTACCCAGGGCCAGCCCACGTCATTAAGGTTAT...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTCTATCCACTCTTATTaGCAGAGGAAAGATGAACTG +
Preference number: 4 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPSIHSY*QRKDEL
Trigger: CAGTTCATCTTTCCTCTGCCAATAAGAGTGGATAGA...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTCCAGGCATTGGTCTTTaGGGGTTTCTTCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAPGIGL*GFLPLM
Trigger: CATGAGAGGAAGAAACCCCCAAAGACCAATGCCTGG...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACACCTAGGAGCCTGCTCTaGCGAGGGAAGGTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LILSRKLRRCRDLGELITPRSLL*RGKVSL
Trigger: CAGCGACACCTTCCCTCGCCAGAGCAGGCTCCTAGG...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 72 bp CCATGGTTCCTTCCTGGTCCTCACGTTTGTGATGGGTaGACCTTGAGGCTGGTCTCCCAGAAACATTCTGTA +
Preference number: 4 (lower is better)
Translates to: PWFLPGPHVCDG*TLRLVSQKHSV
Trigger: TACAGAATGTTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAACCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCAACAGAACTCTCTGGTTaGAGTCTCTTGTCCCTAATC +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHATELSG*SLLSLI
Trigger: GATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGT...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCCTGTGGCTGCTGAGGTaGCCATACCTAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICLWLLR*PYLGSL
Trigger: GAGTGAGCCTAGGTATGGTCACCTCAGCAGCCACAG...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTATATATACTGGGATaGCAGAAGGGAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSLYILG*QKGRPP
Trigger: TGGTGGTCTTCCCTTCTGTCATCCCAGTATATATAG...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGGAAGAAAGTTGGTCTTaGCTTGGGCCAGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVEESWS*LGPENK
Trigger: CTTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTC...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGCTCTCTATAAATACATaGTACCCACCATTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRLSINT*YPPFAH
Trigger: GTGAGCAAATGGTGGGTAGCATGTATTTATAGAGAG...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGTACATAACCGTTATGTaGAGGTTGTACAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQYITVM*RLYRDA
Trigger: TGCATCCCTGTACAACCTGCACATAACGGTTATGTA...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCCACAGCAGCTCTGTaGCCTCACAGCGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVATAAL*PHSVWE
Trigger: TTCCCAAACGCTGTGAGGGCACAGAGCTGCTGTGGC...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATCAGAAAGCAAACCCGTaGACAGGGACCCGGCACCCC +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYQKANP*TGTRHP
Trigger: GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTG...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGAGTAGGCCGCATTCATaGCTTCCTCGTGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVSRPHS*LPRAPA
Trigger: CGCTGGAGCACGAGGAAGCCATGAATGCGGCCTACT...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCTCGTTGTACATGTCCTaGGTATTGAGCAGGTCACTA +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSSLYMS*VLSRSL
Trigger: TAGTGACCTGCTCAATACCCAGGACATGTACAACGA...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCATCCGACTTGGAGAAGTaGATCAGGTCATCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPSDLEK*IRSSLY
Trigger: GTACAACGATGACCTGATCCACTTCTCCAAGTCGGA...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATTGGACGATCTTCTCGTaGGGGGTGGCCACGACGCTC +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYWTIFS*GVATTL
Trigger: GAGCGTCGTGGCCACCCCCCACGAGAAGATCGTCCA...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCTTGGCTCAGAGATTCTaGGAAGAAATAATGTATGGT +
Preference number: 4 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCLAQRF*EEIMYG
Trigger: ACCATACATTATTTCTTCCCAGAATCTCTGAGCCAA...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCAGATCACAGAACTCTCTaGTTGAAGTCTCTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHADHRTL*LKSLVP
Trigger: AGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAACTTCAGTCATTGGCTaGGATTCGCCTTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVATSVIG*DSPSGA
Trigger: GGCTCCTGAAGGCGAATCTCAGCCAATGACTGAAGT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCAGCTTGACTCGGGACTaGTTCTTTAAGCCCTTAATA +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSSLTRD*FFKPLI
Trigger: TATTAAGGGCTTAAAGAATCAGTCCCGAGTCAAGCT...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTACCAGGAGGGGGAGGTaGACGTGGGAGTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSTRRGR*TWESNP
Trigger: GGGGTTGGACTCCCACGTTCACCTCCCCCTCCTGGT...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGCCTGGGCCTGCATCATaGGCACGTTTTTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVPGPAS*ARFWKE
Trigger: CTCCTTCCAAAAACGTGCGCATGATGCAGGCCCAGG...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGCAGGTGGGTGCTGGCTaGTCTCCATCCTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEQVGAG*SPSSRE
Trigger: CTCCCTTGAGGATGGAGAGCAGCCAGCACCCACCTG...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCGCCTGCCTGGCCACCTaGCAGGGAAGGGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPACLAT*QGRGLP
Trigger: TGGAAGGCCCCTTCCCTGGCAGGTGGCCAGGCAGGC...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTCAGGATGGGTTCTGGTaGCTCTGCCTGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTQDGFW*LCLDQE
Trigger: CTCCTGGTCCAGGCAGAGGCACCAGAACCCATCCTG...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGGCACTCCTAGGAGCCTaGTCTGGCGAGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEALLGA*SGEGRC
Trigger: ACACCTTCCCTCGCCAGAGCAGGCTCCTAGGAGTGC...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGTCGTGCTCCAGCGAGTaGAAGTGCAGGTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAESCSSE*KCRWLG
Trigger: GCCCAACCACCTGCACTTCCACTCGCTGGAGCACGA...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTTCACGGTGGGGAGGATaGATCCCCAGCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTSRWGG*IPSQTP
Trigger: TGGAGTCTGGCTGGGGATCCATCCTCCCCACCGTGA...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTCCCACTTCAGCTGGGTaGACCTGTACCGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTPTSAG*TCTELQ
Trigger: CTGGAGCTCGGTACAGGTCCACCCAGCTGAAGTGGG...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGTGCCCTCACAGCGTTTaGGAAGGCTGCCCTGTACAT +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVCPHSV*EGCPVH
Trigger: ATGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCA...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGGAGAAAAGGCAGGATaGGTTCTGGTGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVGEKAG*VLVPLP
Trigger: AGGCAGAGGCACCAGAACCCATCCTGCCTTTTCTCC...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGGTAGTAGGTTACTCTaGGACTCCCTGAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVGSRLL*DSLKAV
Trigger: CACCGCCTTCAGGGAGTCCCAGAGTAACCTACTACC...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 72 bp ATGAATTGCCAAGCTCTCTGTGACACTATGGTGTCCTaGCCCAAGGCAGTTATTTCCCCTTTTATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: MNCQALCDTMVS*PKAVISPFILG
Trigger: CCCCAGGATAAAAGGGGAAATAACTGCCTTGGGCAAGGACACCATAGTGTCACAGAGAGCTTGGCAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 72 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTaGAGGCTGGTCTCCCAGAAACATTCTGTAAAGCAT +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLT*RLVSQKHSVKH
Trigger: ATGCTTTACAGAATGTTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGCGTGTAGACGTAGCCTaGGTAGGCCGCATTCATGGC +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAERVDVA*VGRIHG
Trigger: GCCATGAATGCGGCCTACTCAGGCTACGTCTACACG...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR TCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGAATTGGCGGCAAAAATaGTTCCATCGATCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVNWRQK*FHRSSL
Trigger: AAGACTTGATCGATGGAATCATTTTTGCCGCCAATT...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCACTTCAGTCATTGGCTaGGATTCGCCTTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICTSVIG*DSPSGA
Trigger: GGCTCCTGAAGGCGAATCTCAGCCAATGACTGAAGT...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGTGGTCCTCACGTTTGTaGTGGGTTGACCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVWSSRL*WVDLEA
Trigger: AGCCTCAAGGTCAACCCATCACAAACGTGAGGACCA...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCCATGGGCCCCTACGATaGTTTTCCAAGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTHGPLR*FSKAPD
Trigger: ATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATG...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGCTGATGGTGGCTCCCTaGAATGCTCACACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVLMVAP*NAHTGE
Trigger: TTCTCCAGTGTGAGCATTTCAGGGAGCCACCATCAG...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCATGGGGTGAAGAGATGTaGTTGATGACTCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAWGEEM*LMTLHP
Trigger: TGGGTGCAGAGTCATCAAGCACATCTCTTCACCCCA...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCCTGTCCGATGGACTGTaGAATCAGCTGAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTLSDGL*NQLSIL
Trigger: GAGGATGCTCAGCTGATTGCACAGTCCATCGGACAG...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCGTATGCCACGCTAAATaGCTGTCCGATGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICVCHAK*LSDGLC
Trigger: GCACAGTCCATCGGACAGGCATTTAGCGTGGCATAC...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGGAAGGGTGATATGCAAATGGGACTGTGTGTGTGTGTGTGTGCTCTCTATAAATACATaGTACCCACCATTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: WWEQGRVICKWDCVCVCVLSINT*YPPFAH
Trigger: GTGAGCAAATGGTGGGTAGCATGTATTTATAGAGAG...CACACACACACACACACAGTCCCATTTGCATATCACCCTTCCCTGCTCCCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTCCGGGTGCCACTCTCTaGAGCAGCAGAAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTPGATL*SSRSPF
Trigger: AAAGGGACTTCTGCTGCTGCAGAGAGTGGCACCCGG...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCATACATAACCGTTATGTaGAGGTTGTACAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPYITVM*RLYRDA
Trigger: TGCATCCCTGTACAACCTGCACATAACGGTTATGTA...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGCCGCAATGTAGGAAATaGTCCTCAGAGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVPQCRK*SSEGGP
Trigger: TGGACCACCCTCTGAGGACCATTTCCTACATTGCGG...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCGCCCTGAGGAATTCCTaGTATGCCACGCTAAATGCC +
Preference number: 4 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTALRNS*YATLNA
Trigger: GGCATTTAGCGTGGCATACCAGGAATTCCTCAGGGC...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTCCTTCCTGGTCCTCACGTTTGTGATGGGTTGACCTTGAGGCTGGTCTCCCAGTTGGCTCAGAGATTCTaGGAAGAAATAATGTATGGT +
Preference number: 4 (lower is better)
Translates to: FLPGPHVCDGLTLRLVSQLAQRF*EEIMYG
Trigger: ACCATACATTATTTCTTCCCAGAATCTCTGAGCCAA...CTGGGAGACCAGCCTCAAGGTCAACCCATCACAAACGTGAGGACCAGGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTTGCTTTAAGCCAAAGTaGTGCTGGAGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTCFKPK*CWRGWA
Trigger: GGCCCAGCCCCTCCAGCACCACTTTGGCTTAAAGCA...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTGGAGAACCCTGGCCATaGTTCCTTCCTGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTGEPWP*FLPGPH
Trigger: GTGAGGACCAGGAAGGAACCATGGCCAGGGTTCTCC...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCATCTATCCACTCTTATTaGCAGAGGAAAGATGAACTG +
Preference number: 4 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHASIHSY*QRKDEL
Trigger: CAGTTCATCTTTCCTCTGCCAATAAGAGTGGATAGA...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTCCTAGGAGCCTGCTCTaGCGAGGGAAGGTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSPRSLL*RGKVSL
Trigger: CAGCGACACCTTCCCTCGCCAGAGCAGGCTCCTAGG...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAGAAGGGCTCTGTAGATaGTTTTCATCTGTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAEGLCR*FSSVCG
Trigger: CCCGCACACAGATGAAAACCATCTACAGAGCCCTTC...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGGGGAGCAGGGAAGGGTaGTATGCAAATGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEGSREG*YANGTV
Trigger: CACAGTCCCATTTGCATATCACCCTTCCCTGCTCCC...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTACATCTACACTGAACTaGGACGGAAGCATAAATATG +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWATSTLN*DGSINM
Trigger: CATATTTATGCTTCCGTCTCAGTTCAGTGTAGATGT...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTTGCGAGCTCATGCTCTaGTTCACCTCGGCCACTATC +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTCELML*FTSATI
Trigger: GATAGTGGCCGAGGTGAAGCAGAGCATGAGCTCGCA...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR GCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTACGGCTTCCTGGGCCTaGATCATGCGCACGTTTTTG +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTTASWA*IMRTFL
Trigger: CAAAAACGTGCGCATGATGCAGGCCCAGGAAGCCGT...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCGAGGAATTCCTGGTATaGCACGCTAAATGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICEEFLV*HAKCLS
Trigger: GGACAGGCATTTAGCGTGGCATACCAGGAATTCCTC...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTCTGAATCAGCTGCTTTaGTGCCCCGCGAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTLNQLL*CPASSF
Trigger: AAAGGAGCTCGCGGGGCAGCAAAGCAGCTGATTCAG...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCAGACGCAATTGCACCTaGAGCTTGCCTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICRRNCT*SLPSWE
Trigger: TTCCCAAGAAGGCAAGCTGCAGGTGCAATTGCGTCT...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATCTAGGCTCACTCCCTTaGCCCAGTGGTAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYLGSLP*PSGSGK
Trigger: TTTCCCACTACCACTGGGGCAAGGGAGTGAGCCTAG...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTGTGTCCGTGTGGTTGTaGAAGCCGCTCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSVSVWL*KPLSVL
Trigger: CAGCACGGAGAGCGGCTTCCACAACCACACGGACAC...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTCCCAGATGGGCTCTTTaGGCTCGTCGGGGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSPRWAL*ARRGCK
Trigger: CTTACACCCCCGACGAGCCCAAAGAGCCCATCTGGG...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATAGGGGAAAGTCTCAGTaGACACAGGGATGCAGCACG +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYRGKSQ*TQGCST
Trigger: CGTGCTGCATCCCTGTGTCCACTGAGACTTTCCCCT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATGAAGTCTGCACCTCCTaGGAAGGGAGGATTCTCCCT +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYEVCTS*EGRILP
Trigger: AGGGAGAATCCTCCCTTCCCAGGAGGTGCAGACTTC...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATGTGTCGCTGGAGAAGTaGGCTCCAGGCATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYVSLEK*APGIGL
Trigger: AAGACCAATGCCTGGAGCCCACTTCTCCAGCGACAC...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCGAAGGGCTCTGTAGATaGTTTTCATCTGTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTEGLCR*FSSVCG
Trigger: CCCGCACACAGATGAAAACCATCTACAGAGCCCTTC...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATACAGGGTCACTGGGGTaGAGAGATGTGCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYTGSLG*RDVLDD
Trigger: GTCATCAAGCACATCTCTTCACCCCAGTGACCCTGT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGTTGCCAAGCTCTCTGTaGCACTATGGTGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAELPSSL*HYGVLA
Trigger: GGCAAGGACACCATAGTGTCACAGAGAGCTTGGCAA...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTTTGCCAAGCTCTCTGTaGCACTATGGTGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTLPSSL*HYGVLA
Trigger: GGCAAGGACACCATAGTGTCACAGAGAGCTTGGCAA...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTGCTTCAGATGCCCCATaGATTGCCAAGCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTASDAP*IAKLSV
Trigger: CACAGAGAGCTTGGCAATTCATGGGGCATCTGAAGC...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCGAGATCTCGGGGAATTaGTCACAGAACTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICEISGN*SQNSLV
Trigger: AACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTC...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGTGGTCCTCACGTTTGTaGTGGGTTGACCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEWSSRL*WVDLEA
Trigger: AGCCTCAAGGTCAACCCATCACAAACGTGAGGACCA...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTTCCAAGGCTCCTaGTGCCTGAAATACCACCAG +
Preference number: 4 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTIFQGS*CLKYHQ
Trigger: CTGGTGGTATTTCAGGCATCAGGAGCCTTGGAAAAT...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTATTCTCTCCTTTAGGTaGACATACATAACCGTTATG +
Preference number: 4 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAILSFR*TYITVM
Trigger: CATAACGGTTATGTATGTTCACCTAAAGGAGAGAAT...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCCAACCCCAAACTGGATaGCTGTGGCCACGGGACGGA +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPQPQTG*LWPRDG
Trigger: TCCGTCCCGTGGCCACAGTCATCCAGTTTGGGGTTG...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTTCCGCAGGGCCACCATaGATCATGTTGGCAATGATC +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTSAGPP*IMLAMI
Trigger: GATCATTGCCAACATGATGCATGGTGGCCCTGCGGA...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAAGAAATAATGTATGGTaGCCCAACTACATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVARNNVW*PNYMAG
Trigger: GCCTGCCATGTAGTTGGGGCACCATACATTATTTCT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCAGATGCCCCATGAATTaGCAAGCTCTCTGTGACACT +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICRCPMN*QALCDT
Trigger: AGTGTCACAGAGAGCTTGGCAATTCATGGGGCATCT...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTCCGGGTGCCACTCTCTaGAGCAGCAGAAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSPGATL*SSRSPF
Trigger: AAAGGGACTTCTGCTGCTGCAGAGAGTGGCACCCGG...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCGTGGCACTGCCCAGGTaGCTAGGGACAGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPVALPR*LGTDRH
Trigger: ATGCCTGTCTGTCCCTAGGCACCTGGGCAGTGCCAC...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAAAAGATCGAGTTGTGTaGTCAAGTCAACCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVAKDRVV*SSQPRP
Trigger: TGGCCTAGGTTGACTTGAGCACACAACTCGATCTTT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCGTGGGGCTAATGTCCTaGCGCATGACCCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPVGLMS*RMTQMG
Trigger: GCCCATCTGGGTCATGCGCCAGGACATTAGCCCCAC...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTGAAAGCCCTCCAGGATaGTCCTGGGTCAGTACCAGG +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSESPPG*SWVSTR
Trigger: CCTGGTACTGACCCAGGACCATCCTGGAGGGCTTTC...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACAATAACCTTAATGACGTaGGCTGGCCCTGGGTACTAC +
Preference number: 4 (lower is better)
Translates to: LILSRKLRRCRDLGELITITLMT*AGPGYY
Trigger: GTAGTACCCAGGGCCAGCCCACGTCATTAAGGTTAT...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCGTCTCCTTAATTTTGTaGTTTATGTACTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSVSLIL*FMYYSG
Trigger: GCCAGAATAGTACATAAACCACAAAATTAAGGAGAC...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGAGGGACAGACAGGCATaGGCCCCTACGATGATTTTC +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAERDRQA*APTMIF
Trigger: GAAAATCATCGTAGGGGCCCATGCCTGTCTGTCCCT...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAACTCAAACCAACAGGTaGCCTGTGAATGCGAGTAAA +
Preference number: 4 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVATQTNR*PVNASK
Trigger: TTTACTCGCATTCACAGGCCACCTGTTGGTTTGAGT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTATCACAACCCCAAACTaGATGACTGTGGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTITTPN*MTVATG
Trigger: TCCCGTGGCCACAGTCATCCAGTTTGGGGTTGTGAT...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGCTATATATACTGGGATaGCAGAAGGGAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVLYILG*QKGRPP
Trigger: TGGTGGTCTTCCCTTCTGTCATCCCAGTATATATAG...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTCTGTGTAAAACCAAATaGTGGGCGCGAGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTLCKTK*WAREGK
Trigger: TTTCCCCTCTCGCGCCCAGCATTTGGTTTTACACAG...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATCTGTGTAAAACCAAATaGTGGGCGCGAGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYLCKTK*WAREGK
Trigger: TTTCCCCTCTCGCGCCCAGCATTTGGTTTTACACAG...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGCCATCCTCAAGGGAGTaGATACGAAACTTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEPSSRE*IRNFPG
Trigger: ACCAGGGAAGTTTCGTATGCACTCCCTTGAGGATGG...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTTTTAAGCCAAAGTGGTaGTGGAGGGGCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSFKPKW*WRGWAS
Trigger: TGAGGCCCAGCCCCTCCAGCACCACTTTGGCTTAAA...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTAGCGTTTGGGAAGGCTaGCCTGTACATAGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSSVWEG*PVHSLP
Trigger: GGGAAGGCTATGTACAGGGCAGCCTTCCCAAACGCT...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATTGTAAGGCGAACGGATaGTCCTGGTTTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYCKANG*SWFSPP
Trigger: AGGAGGTGAAAACCAGGACCATCCGTTCGCCTTACA...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACATCTCCCCAACAGCATTaGAGAGAATGTGGACGATCT +
Preference number: 4 (lower is better)
Translates to: LILSRKLRRCRDLGELITSPQQH*RECGRS
Trigger: AGATCGTCCACATTCTCTCCAATGCTGTTGGGGAGA...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTGCAGGGATCAGCAACTaGGTTTTAGGCACTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTAGISN*VLGTAE
Trigger: TTCAGCAGTGCCTAAAACCCAGTTGCTGATCCCTGC...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTTTCAGCTTGTCTCACTaGTGGTGGGAGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSFSLSH*WWEQGR
Trigger: CCTTCCCTGCTCCCACCACCAGTGAGACAAGCTGAA...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGCCTTCAAAGAAGTCCTaGGGAGCTTTACGGACCATC +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEPSKKS*GALRTI
Trigger: GATGGTCCGTAAAGCTCCCCAGGACTTCTTTGAAGG...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGTATAACTATATATACTaGGATGACAGAAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEEYNYIY*DDRRED
Trigger: GTCTTCCCTTCTGTCATCCCAGTATATATAGTTATA...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTTGCCCTCACAGCGTTTaGGAAGGCTGCCCTGTACAT +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSCPHSV*EGCPVH
Trigger: ATGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCA...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCGGGAGCAGGGAAGGGTaGTATGCAAATGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPGSREG*YANGTV
Trigger: CACAGTCCCATTTGCATATCACCCTTCCCTGCTCCC...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATGAGATCTCGGGGAATTaGTCACAGAACTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYEISGN*SQNSLV
Trigger: AACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTC...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTCAGTGGACACAGGGATaGAGCACGAGAAACACAACC +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSQWTQG*STRNTT
Trigger: GGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTG...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACAAAAACAAGACGCAATTaGACCTGCAGCTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LILSRKLRRCRDLGELITKTRRN*TCSLPS
Trigger: AGAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTT...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCTCATGCGCACGTTTTTaGAAGGAGTTTTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICSCARF*KEFCLR
Trigger: TCTCAGACAAAACTCCTTCCAAAAACGTGCGCATGA...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACAAGGGTGATATGCAAATaGGACTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LILSRKLRRCRDLGELITRVICK*DCVCVC
Trigger: ACACACACACACACAGTCCCATTTGCATATCACCCT...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATAGCAGAGAAGAAAGTTaGTCTTGCCTTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYSREES*SCLGPE
Trigger: TTCTGGCCCAAGGCAAGACCAACTTTCTTCTCTGCT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGGCAAGAGGGTGTTTATaGACCACATCTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEARGCL*TTSGDS
Trigger: AGAATCCCCAGATGTGGTCCATAAACACCCTCTTGC...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
3UTR CAA 72 bp CAGAGATCTCGGGGAATTGATCACAGAACTCTCTGGTaGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACT +
Preference number: 4 (lower is better)
Translates to: QRSRGIDHRTLW*KSLVPNLVIVT
Trigger: AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGGGCATTGTCTTCATATaGATCTCCCCAACAGCATTG +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEGIVFI*ISPTAL
Trigger: CAATGCTGTTGGGGAGATTCATATGAAGACAATGCC...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCAAATCACACCTCACATaGACACAAAATGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PSLESLHSLYKYMLPTICKSHLT*TQNALW
Trigger: CCAAAGAGCATTTTGTGTTCATGTGAGGTGTGATTT...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATCCACCATTTGCTCACTaGGTTCCTATTTCCATAGAC +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYPPFAH*VPISID
Trigger: GTCTATGGAAATAGGAACTCAGTGAGCAAATGGTGG...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTCCACCATTTGCTCACTaGGTTCCTATTTCCATAGAC +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTPPFAH*VPISID
Trigger: GTCTATGGAAATAGGAACTCAGTGAGCAAATGGTGG...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTAGAAATAATGTATGGTaGCCCAACTACATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTRNNVW*PNYMAG
Trigger: GCCTGCCATGTAGTTGGGGCACCATACATTATTTCT...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATAAAGATCGAGTTGTGTaGTCAAGTCAACCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYKDRVV*SSQPRP
Trigger: TGGCCTAGGTTGACTTGAGCACACAACTCGATCTTT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCGCATTGGAGAGAATGTaGACGATCTTCTCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPALERM*TIFSWG
Trigger: CCCCCACGAGAAGATCGTCCACATTCTCTCCAATGC...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGGAGAGCTTGCAGAATTaGCTTTTTCAGCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEESLQN*LFQHLS
Trigger: TGAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTC...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTAGCCAAGCTTTTTCTTaGCTCTTTATTAGTGGACGC +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTSQAFS*LFISGR
Trigger: GCGTCCACTAATAAAGAGTCAAGAAAAAGCTTGGCT...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGAGCTTGACTCGGGACTaGTTCTTTAAGCCCTTAATA +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAESLTRD*FFKPLI
Trigger: TATTAAGGGCTTAAAGAATCAGTCCCGAGTCAAGCT...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp CTGATTCTAAGCAGAAAACTCAGAAGATGCAGAGATCTCGGGGAATTGATCACAAAATCACACCTCACATaGACACAAAATGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LILSRKLRRCRDLGELITKSHLT*TQNALW
Trigger: CCAAAGAGCATTTTGTGTTCATGTGAGGTGTGATTT...TGTGATCAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCTGCTTAGAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTGAAGCAGACAGTACCTaGCTGTGTTTATCTAATGGT +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTEADST*LCLSNG
Trigger: ACCATTAGATAAACACAGGCAGGTACTGTCTGCTTC...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCACAGTCCTCACACACTaGCTTGATGGAGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPTVLTH*LDGGEE
Trigger: TTCTTCCCCTCCATCAAGGCAGTGTGTGAGGACTGT...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTCTTTTGGCTAATTTCTaGGCCATCTTGATCCTGCTT +
Preference number: 4 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTLLANF*AILILL
Trigger: AAGCAGGATCAAGATGGCCCAGAAATTAGCCAAAAG...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCATGGTCCTCAGAGGGTaGTCCATCATTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPMVLRG*SIIVSC
Trigger: ACAGGAGACAATGATGGACCACCCTCTGAGGACCAT...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTACAGAACTCTCTGGTTaGAGTCTCTTGTCCCTAATC +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSTELSG*SLLSLI
Trigger: GATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGT...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTCCTGTACATCGCGGCTaGCATTGTCTTCATATGAAT +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSPVHRG*HCLHMN
Trigger: ATTCATATGAAGACAATGCCAGCCGCGATGTACAGG...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTTTTCCCCTTTTATCCTaGGGTGAGAAGGCTCGTATT +
Preference number: 4 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSFPLLS*GEKARI
Trigger: AATACGAGCCTTCTCACCCCAGGATAAAAGGGGAAA...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCAGGAAGTACATTCAGTaGGTGTGCGGTGTCCACATT +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPRKYIQ*VCGVHI
Trigger: AATGTGGACACCGCACACCCACTGAATGTACTTCCT...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR TCA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATATTCTCTCCTTTAGGTaGACATACATAACCGTTATG +
Preference number: 4 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYILSFR*TYITVM
Trigger: CATAACGGTTATGTATGTTCACCTAAAGGAGAGAAT...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGCATAAATATCTCGGATaGAGAGAACAGGGACTATAT +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEHKYLG*REQGLY
Trigger: ATATAGTCCCTGTTCTCTGCATCCGAGATATTTATG...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCAGAAAACTCAGAAGATaGAGAGATCTCGGGGAATTG +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPRKLRR*RDLGEL
Trigger: CAATTCCCCGAGATCTCTGCATCTTCTGAGTTTTCT...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CCA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGTATAACTATATATACTaGGATGACAGAAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CSLSSYFHRHNINISDAEYNYIY*DDRRED
Trigger: GTCTTCCCTTCTGTCATCCCAGTATATATAGTTATA...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR GCA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCGTTCTTGTTTATTGTTaGAGCAACTCTTATACAGAC +
Preference number: 4 (lower is better)
Translates to: TNTILYFSRHFTISSISPVLVYC*SNSYTD
Trigger: GTCTGTATAAGAGTTGCTGCAACAATAAACAAGAAC...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 90 bp GTGCTGGCTGAGCGCGCCAGGCATTCCCCGCGCTCCTCTTCCTCCTaGCCGAGCTGGGCGCGGAGGTCCTCGAGGGCTCGCCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: VLAERARHSPRSSSS*PSWARRSSRARPRW
Trigger: CCAGCGCGGGCGAGCCCTCGAGGACCTCCGCGCCCAGCTCGGCCAGGAGGAAGAGGAGCGCGGGGAATGCCTGGCGCGCTCAGCCAGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 90 bp AAGTGCAGGTGGTTGGGCAGCGCGCGGCGGTGCGTGGCCTCGGCGTaGTCGGCCTCTGCCTGCTCCGTGTACTCCTCGGCCTCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: KCRWLGSARRCVASA*SASACSVYSSASGR
Trigger: CCGGCCCGAGGCCGAGGAGTACACGGAGCAGGCAGAGGCCGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 90 bp CGGGCCGCGGCGATCACGTCGCCCTCGGCGGTGTCCGTGTGGTTGTaGAAGCCGCTCTCCGTGCTGGCTGAGCGCGCCAGGCATTCCCCG +
Preference number: 5 (lower is better)
Translates to: RAAAITSPSAVSVWL*KPLSVLAERARHSP
Trigger: CGGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGACACCGCCGAGGGCGACGTGATCGCCGCGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 90 bp GGCCGCCTCGTCGCGCTCCTGCTCGTAGAGCCGCAGGCCGTCGCGTaGGTCCAGCTCGGGCGCGTCCCCTATCTCCTCGTACACGTGCTC +
Preference number: 5 (lower is better)
Translates to: GRLVALLLVEPQAVA*VQLGRVPYLLVHVL
Trigger: GAGCACGTGTACGAGGAGATAGGGGACGCGCCCGAGCTGGACGCACGCGACGGCCTGCGGCTCTACGAGCAGGAGCGCGACGAGGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 90 bp CGCCCTCGGCGGTGTCCGTGTGGTTGTGGAAGCCGCTCTCCGTGCTaGCTGAGCGCGCCAGGCATTCCCCGCGCTCCTCTTCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: RPRRCPCGCGSRSPC*LSAPGIPRAPLPPG
Trigger: GCCAGGAGGAAGAGGAGCGCGGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGACACCGCCGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 90 bp GCCGCATTCATGGCTTCCTCGTGCTCCAGCGAGTGGAAGTGCAGGTaGTTGGGCAGCGCGCGGCGGTGCGTGGCCTCGGCGTGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: AAFMASSCSSEWKCR*LGSARRCVASACSA
Trigger: GGCCGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCATGAATGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS TCA 90 bp CTCGGCGGTGTCCGTGTGGTTGTGGAAGCCGCTCTCCGTGCTGGCTaGGCGCGCCAGGCATTCCCCGCGCTCCTCTTCCTCCTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LGGVRVVVEAALRAG*ARQAFPALLFLLAE
Trigger: CTCGGCCAGGAGGAAGAGGAGCGCGGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGACACCGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 90 bp CGTCGCCCTCGGCGGTGTCCGTGTGGTTGTGGAAGCCGCTCTCCGTaGTGGCTGAGCGCGCCAGGCATTCCCCGCGCTCCTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RRPRRCPCGCGSRSP*WLSAPGIPRAPLPP
Trigger: AGGAGGAAGAGGAGCGCGGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGACACCGCCGAGGGCGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 90 bp ACAGCGCTGGTGCCAAGCCTGGGAATAAAGCTCCGCTCCAGCCGCTaGTGCCTCCAGCGCCACCATCTTCTCCCGCCGCAGCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: TALVPSLGIKLRSSR*CLQRHHLLPPQLPP
Trigger: CGGCGGCAGCTGCGGCGGGAGAAGATGGTGGCGCTGGAGGCAGCAGCGGCTGGAGCGGAGCTTTATTCCCAGGCTTGGCACCAGCGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 90 bp TGCTGCTGCTGCGGCGGCTGCTGCTGTTCCTCTTCCACCTCGGGGTaGTCCAGGTCGGCCTCCACCGACTCGTTCACCTCCCCACCTGCC +
Preference number: 5 (lower is better)
Translates to: CCCCGGCCCSSSTSG*SRSASTDSFTSPPA
Trigger: GGCAGGTGGGGAGGTGAACGAGTCGGTGGAGGCCGACCTGGAGCACCCCGAGGTGGAAGAGGAACAGCAGCAGCCGCCGCAGCAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 90 bp CATTCATGGCTTCCTCGTGCTCCAGCGAGTGGAAGTGCAGGTGGTTaGGCAGCGCGCGGCGGTGCGTGGCCTCGGCGTGCTCGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: HSWLPRAPASGSAGG*AARGGAWPRRARPL
Trigger: CAGAGGCCGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCATGAATG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGTGGAAGTGCAGGTGGTaGGGCAGCGCGCGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVWKCRW*GSARRC
Trigger: GCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCA...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 90 bp AGGGGGACGCTCCAGGTCCTGCTCGGCCTCAGGCATGTCCTCGGCTaGCTTGTCGAGGCTCTGCGAGCTCATGCTCTGCTTCACCTCGGC +
Preference number: 5 (lower is better)
Translates to: RGTLQVLLGLRHVLG*LVEALRAHALLHLG
Trigger: GCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCTGAGGCCGAGCAGGACCTGGAGCGTCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CAA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGCATCGCGCTTCTCCTaGCTGTACCGCTGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCASRFS*LYRCPA
Trigger: GGCGGGGCAGCGGTACAGCAAGGAGAAGCGCGATGC...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 90 bp TGCCTTTTCCCATCCTGGGATGGGTGGGACGCTTCCACGTTCTCCTaGGAGTTGGAGCGAGGCATCCGCCGGCGGGCCATCAGCACAACG +
Preference number: 5 (lower is better)
Translates to: CLFPSWDGWDASTFS*ELERGIRRRAISTT
Trigger: CGTTGTGCTGATGGCCCGCCGGCGGATGCCTCGCTCCAACTCCCAGGAGAACGTGGAAGCGTCCCACCCATCCCAGGATGGGAAAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265381.7
ENST00000470082.2
ENST00000617471.3
ENST00000620509.2
CDS-3UTR CAA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCATGTCCTCGGCTGCCTaGTCGAGGCTCTGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PKAEPPAHPGGAATAALCMSSAA*SRLCEL
Trigger: GAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACAT...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 90 bp TGGTGGGAGTCGGAACGGCTAGGAGAGAAGCTGGGCCCGGCTCACTaGGCTCTCATTTTGCTCCACTGGGCTTGCCTGACAGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: WWESERLGEKLGPAH*ALILLHWACLTAGS
Trigger: GGACCCAGCTGTCAGGCAAGCCCAGTGGAGCAAAATGAGAGCGCAGTGAGCCGGGCCCAGCTTCTCTCCTAGCCGTTCCGACTCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS TCA 90 bp CTCGTCCTCACCGCGGTGGAAGAGCCGGTGCGTGTAGACGTAGCCTaGGTAGGCCGCATTCATGGCTTCCTCGTGCTCCAGCGAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LVLTAVEEPVRVDVA*VGRIHGFLVLQRVE
Trigger: TTCCACTCGCTGGAGCACGAGGAAGCCATGAATGCGGCCTACTCAGGCTACGTCTACACGCACCGGCTCTTCCACCGCGGTGAGGACGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 90 bp TCCTGCTCGGCCTCAGGCATGTCCTCGGCTGCCTTGTCGAGGCTCTaGGAGCTCATGCTCTGCTTCACCTCGGCCACTATCTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: SCSASGMSSAALSRL*ELMLCFTSATIWSM
Trigger: CATCGACCAGATAGTGGCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCTGAGGCCGAGCAGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGGAGGGTGGTCCATCATaGTCTCCTGTGTGTCGGCGT +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVEGGPS*SPVCRR
Trigger: ACGCCGACACACAGGAGACAATGATGGACCACCCTC...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 90 bp GGAAGAGCCGGTGCGTGTAGACGTAGCCTGAGTAGGCCGCATTCATaGCTTCCTCGTGCTCCAGCGAGTGGAAGTGCAGGTGGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: GRAGACRRSLSRPHS*LPRAPASGSAGGWA
Trigger: TGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCATGAATGCGGCCTACTCAGGCTACGTCTACACGCACCGGCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 90 bp AACACAACCACGAAGAGGAGAGTCCTCCATGCATGCCACCGCGTGTaGCCGCGGTCAGATGTAAACAGGCTGCTCCTGGGCCGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: NTTTKRRVLHACHRV*PRSDVNRLLLGRQQ
Trigger: CTGCTGACGGCCCAGGAGCAGCCTGTTTACATCTGACCGCGGCCACACGCGGTGGCATGCATGGAGGACTCTCCTCTTCGTGGTTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGCACGTTTGTGATGGGTaGACCTTGAGGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RDALLEFCPLASRGRASVHVCDG*TLRLVS
Trigger: GGAGACCAGCCTCAAGGTCAACCCATCACAAACGTG...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CAGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTCACGTTTGTGATGGGTaGACCTTGAGGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QGCTTGVLSPGQSWAGLCHVCDG*TLRLVS
Trigger: GGAGACCAGCCTCAAGGTCAACCCATCACAAACGTG...ACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 90 bp GCGTGGCACCATCTTCCTTACAGAGCAGTGTCTCCCAAGCACATGTaGGCACCTGGTGCAAGCTCCTTCCACTTGAGCCCAGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: AWHHLPYRAVSPKHM*APGASSFHLSPAQP
Trigger: AGGCTGGGCTGGGCTCAAGTGGAAGGAGCTTGCACCAGGTGCCCACATGTGCTTGGGAGACACTGCTCTGTAAGGAAGATGGTGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGGGTGAAGAGATGTGCTaGATGACTCTGCACCCAAGG +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVGEEMC*MTLHPR
Trigger: CCTTGGGTGCAGAGTCATCAAGCACATCTCTTCACC...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGAATTGCACCTGCAGCTaGCCTTCTTGGGAACAGTCC +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVNCTCS*PSWEQS
Trigger: GGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATT...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 90 bp GGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATaGATGCCACCGCGTGTGGCCGCGGTCAGATGTAAACAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GMQHEKHNHEEESPP*MPPRVAAVRCKQAA
Trigger: AGCAGCCTGTTTACATCTGACCGCGGCCACACGCGGTGGCATGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAGCCTCCTTGATGTCCTaGATGGCCAGCGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: TATPLGRGTREGLCRWFSASLMS*MASEMA
Trigger: TGCCATCTCGCTGGCCATCAAGGACATCAAGGAGGC...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGGATCCACTTCAGTCATaGGCTGAGATTCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVDPLQS*AEIRLQ
Trigger: CTGAAGGCGAATCTCAGCCAATGACTGAAGTGGATC...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAGAGGGTGGTCCATCATaGTCTCCTGTGTGTCGGCGT +
Preference number: 5 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGEGGPS*SPVCRR
Trigger: ACGCCGACACACAGGAGACAATGATGGACCACCCTC...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCACGTTCTCCTGGGAGTaGGAGCGAGGCATCCGCCGG +
Preference number: 5 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCTFSWE*ERGIRR
Trigger: CCGGCGGATGCCTCGCTCCAACTCCCAGGAGAACGT...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGGACACTATGGTGTCCTaGCCCAAGGCAGTTATTTCC +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVDTMVS*PKAVIS
Trigger: GGAAATAACTGCCTTGGGCAAGGACACCATAGTGTC...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGACCGTTATGTGCAGGTaGTACAGGGATGCACTACTG +
Preference number: 5 (lower is better)
Translates to: RDALLEFCPLASRGRASVTVMCR*YRDALL
Trigger: CAGTAGTGCATCCCTGTACAACCTGCACATAACGGT...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGTCCCTGAAGGCGGTGTaGATGGGCAATGTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVSLKAV*MGNVQK
Trigger: TTTCTGAACATTGCCCATCAACACCGCCTTCAGGGA...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGTCCTCACACACTGCCTaGATGGAGGGGAAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVSSHTA*MEGKKD
Trigger: ATCTTTCTTCCCCTCCATCAAGGCAGTGTGTGAGGA...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 90 bp TCTTCCTTACAGAGCAGTGTCTCCCAAGCACATGTGGGCACCTGGTaGAAGCTCCTTCCACTTGAGCCCAGCCCAGCCTGCTCAGGATCA +
Preference number: 5 (lower is better)
Translates to: SSLQSSVSQAHVGTW*KLLPLEPSPACSGS
Trigger: TGATCCTGAGCAGGCTGGGCTGGGCTCAAGTGGAAGGAGCTTGCACCAGGTGCCCACATGTGCTTGGGAGACACTGCTCTGTAAGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp TTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCCACCATGCATCATGTaGGCAATGATCACGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LMGNVQKANPCTGTRHPCPPCIM*AMITVG
Trigger: CCCCACCGTGATCATTGCCAACATGATGCATGGTGG...GCAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGCCACCATGCATCATGTaGGCAATGATCACGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLPPCIM*AMITVG
Trigger: CCCCACCGTGATCATTGCCAACATGATGCATGGTGG...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGTGCCTAATCTTCAGCTaGTCTCACTGGTGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLCLIFS*SHWWWE
Trigger: CTCCCACCACCAGTGAGACAAGCTGAAGATTAGGCA...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AGGGATGCACTACTGGAGTTCTGTCCCCTGGCCAGTCGTGGGCGGGCCTCTGTGAGAAGAAAGTTGGTCTaGCCTTGGGCCAGAAAACAA +
Preference number: 5 (lower is better)
Translates to: RDALLEFCPLASRGRASVRRKLV*PWARKQ
Trigger: TTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCT...CACAGAGGCCCGCCCACGACTGGCCAGGGGACAGAACTCCAGTAGTGCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCATGTGATGGGTTGACCTaGAGGCTGGTCTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: TATPLGRGTREGLCRWFSCDGLT*RLVSQK
Trigger: TTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACA...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AAACTGGATGACTGTGGCCACGGGACGGAGGAGGGAGGGAGGGAGGGACCAGTGGGAAGAAAGATCGAGTaGTGTGCTCAAGTCAACCTA +
Preference number: 5 (lower is better)
Translates to: KLDDCGHGTEEGGREGPVGRKIE*CAQVNL
Trigger: TAGGTTGACTTGAGCACACAACTCGATCTTTCTTCC...CACTGGTCCCTCCCTCCCTCCCTCCTCCGTCCCGTGGCCACAGTCATCCAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 90 bp CCAAACCTGGGGAAGCTAACAGCACCATTCACCTGGAAGCCCAGGTaGCATATCTGGTACCCATGGGGCACGTGGAGTCAGAACTATGTC +
Preference number: 5 (lower is better)
Translates to: PNLGKLTAPFTWKPR*HIWYPWGTWSQNYV
Trigger: GACATAGTTCTGACTCCACGTGCCCCATGGGTACCAGATATGCCACCTGGGCTTCCAGGTGAATGGTGCTGTTAGCTTCCCCAGGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 90 bp TTTGTGCTTCCACCAAACCTGGGGAAGCTAACAGCACCATTCACCTaGAAGCCCAGGTGGCATATCTGGTACCCATGGGGCACGTGGAGT +
Preference number: 5 (lower is better)
Translates to: FVLPPNLGKLTAPFT*KPRWHIWYPWGTWS
Trigger: ACTCCACGTGCCCCATGGGTACCAGATATGCCACCTGGGCTTCCAGGTGAATGGTGCTGTTAGCTTCCCCAGGTTTGGTGGAAGCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGAATTTCTGGGCCATCTaGATCCTGCTTACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLNFWAI*ILLTAS
Trigger: GGAAGCCGTAAGCAGGATCAAGATGGCCCAGAAATT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCAGATCCACTTCAGTCATaGGCTGAGATTCGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: TATPLGRGTREGLCRWFSDPLQS*AEIRLQ
Trigger: CTGAAGGCGAATCTCAGCCAATGACTGAAGTGGATC...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGAAAGTTGGTCTTGCCTaGGGCCAGAAAACAAGACGC +
Preference number: 5 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLKVGLA*GQKTRR
Trigger: GCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CCCAAAGCTGAGCCACCAGCACACCCTGGTGGAGCAGCCACAGCAGCTCTGTGCATTCTGAGGCATAACTaGAGGTTGCTATTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PKAEPPAHPGGAATAALCILRHN*RLLLSP
Trigger: AGGAGACAATAGCAACCTCAAGTTATGCCTCAGAAT...GCACAGAGCTGCTGTGGCTGCTCCACCAGGGTGTGCTGGTGGCTCAGCTTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAGGAGAGCTTGCAGAATaGGCTTTTTCAGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGGELAE*AFSAPL
Trigger: GAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTCC...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTGTGCCCTCACAGCGTTaGGGAAGGCTGCCCTGTACA +
Preference number: 5 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAVPSQR*GRLPCT
Trigger: TGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCAC...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAGTGCCCTCACAGCGTTaGGGAAGGCTGCCCTGTACA +
Preference number: 5 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPVPSQR*GRLPCT
Trigger: TGTACAGGGCAGCCTTCCCAAACGCTGTGAGGGCAC...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS TCA 90 bp CAGGAAGAATGGAGACACAAACACCACACTCTGGGTGGATGGACATaGAGCAGTCTCTGTGGTTCAGGTAGGGCTCAGCAGGCCACCCTA +
Preference number: 5 (lower is better)
Translates to: QEEWRHKHHTLGGWT*SSLCGSGRAQQATL
Trigger: TAGGGTGGCCTGCTGAGCCCTACCTGAACCACAGAGACTGCTTCATGTCCATCCACCCAGAGTGTGGTGTTTGTGTCTCCATTCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 90 bp GAAAGATGCTTCACACACTGGCGGGTCCACCTTTCTCTAAGGCAGTaGTTCCCAAACGCTGGTGCAGAGCAGAATCTCCTGGAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: ERCFTHWRVHLSLRQ*FPNAGAEQNLLEGL
Trigger: CAAACCCTCCAGGAGATTCTGCTCTGCACCAGCGTTTGGGAACCACTGCCTTAGAGAAAGGTGGACCCGCCAGTGTGTGAAGCATCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 90 bp CTAGAATGCTACAGGGCACAGTGGGAGGAAAGATGCTTCACACACTaGCGGGTCCACCTTTCTCTAAGGCAGTGGTTCCCAAACGCTGGT +
Preference number: 5 (lower is better)
Translates to: LECYRAQWEERCFTH*RVHLSLRQWFPNAG
Trigger: ACCAGCGTTTGGGAACCACTGCCTTAGAGAAAGGTGGACCCGCCAGTGTGTGAAGCATCTTTCCTCCCACTGTGCCCTGTAGCATTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp ACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGGCTCTGTAGATGGTTTTCATCGGCGTTCAGCACTTaGATTCTCTGGGTAGAAATG +
Preference number: 5 (lower is better)
Translates to: TATPLGRGTREGLCRWFSSAFST*ILWVEM
Trigger: CATTTCTACCCAGAGAATCAAAGTGCTGAACGCCGA...TGAAAACCATCTACAGAGCCCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTGTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTCGGCGTTCAGCACTTaGATTCTCTGGGTAGAAATG +
Preference number: 5 (lower is better)
Translates to: VLMGNVQKANPCTGTRHPSAFST*ILWVEM
Trigger: CATTTCTACCCAGAGAATCAAAGTGCTGAACGCCGA...GGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGAAAGTTGGTCTTGCCTaGGGCCAGAAAACAAGACGC +
Preference number: 5 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRKVGLA*GQKTRR
Trigger: GCGTCTTGTTTTCTGGCCCAAGGCAAGACCAACTTT...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 90 bp GGGAAGCTAACAGCACCATTCACCTGGAAGCCCAGGTGGCATATCTaGTACCCATGGGGCACGTGGAGTCAGAACTATGTCTCTATGTCT +
Preference number: 5 (lower is better)
Translates to: GKLTAPFTWKPRWHI*YPWGTWSQNYVSMS
Trigger: AGACATAGAGACATAGTTCTGACTCCACGTGCCCCATGGGTACCAGATATGCCACCTGGGCTTCCAGGTGAATGGTGCTGTTAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGATCATGCGCACGTTTTaGGAAGGAGTTTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLIMRTF*EGVLSE
Trigger: CTCAGACAAAACTCCTTCCAAAAACGTGCGCATGAT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp AAAGTCTCAGTGGACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGTCGGGGTTAATCCCATaGGCCCTGAGGAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: KVSVDTGMQHEKHNHEEESGLIP*ALRNSW
Trigger: CCAGGAATTCCTCAGGGCCAATGGGATTAACCCCGA...CTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGTCCACTGAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTTCGGGGTTAATCCCATaGGCCCTGAGGAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: CMVPQLHGRQCITLMTWASGLIP*ALRNSW
Trigger: CCAGGAATTCCTCAGGGCCAATGGGATTAACCCCGA...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS TCA 90 bp TTTCTTGACTCTTTATTAGTGGACGCTTCCACAGGGTCACTGGGGTaGAGAGATGTGCTTGATGACTCTGCACCCAAGGGGGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FLDSLLVDASTGSLG*RDVLDDSAPKGEEL
Trigger: CAGCTCCTCCCCCTTGGGTGCAGAGTCATCAAGCACATCTCTTCACCCCAGTGACCCTGTGGAAGCGTCCACTAATAAAGAGTCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 90 bp GTTAATCCCATTGGCCCTGAGGAATTCCTGGTATGCCACGCTAAATaGCTGTCCGATGGACTGTGCAATCAGCTGAGCATCCTCAGACTC +
Preference number: 5 (lower is better)
Translates to: VNPIGPEEFLVCHAK*LSDGLCNQLSILRL
Trigger: GAGTCTGAGGATGCTCAGCTGATTGCACAGTCCATCGGACAGGCATTTAGCGTGGCATACCAGGAATTCCTCAGGGCCAATGGGATTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGTTTGCTCCACTGGGCTaGCCTGACAGCTGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVFAPLG*PDSWVR
Trigger: GCGGACCCAGCTGTCAGGCAAGCCCAGTGGAGCAAA...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CAA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCAACGTGGCAGATCATCTaGTACTGCCTTTTCCCATCC +
Preference number: 5 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHATWQII*YCLFPS
Trigger: GGATGGGAAAAGGCAGTACAAGATGATCTGCCACGT...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCCTGAAATGCATCTCCCCAACAGCATaGGAGAGAATGTGGACGATC +
Preference number: 5 (lower is better)
Translates to: LGVSSSHEPKADGGSLKCISPTA*ERMWTI
Trigger: GATCGTCCACATTCTCTCCAATGCTGTTGGGGAGAT...GCATTTCAGGGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTTGATGGGCAATGTTCAGAAAGCAAACCCGTGCACAGGGACCCGGCACCCCTGATTCTGAGGCATAACTaGAGGTTGCTATTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: VDGQCSESKPVHRDPAPLILRHN*RLLLSP
Trigger: AGGAGACAATAGCAACCTCAAGTTATGCCTCAGAAT...CAGGGGTGCCGGGTCCCTGTGCACGGGTTTGCTTTCTGAACATTGCCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCACCGTTATGTGCAGGTaGTACAGGGATGCACTACTG +
Preference number: 5 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSTVMCR*YRDALL
Trigger: CAGTAGTGCATCCCTGTACAACCTGCACATAACGGT...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCGGAGAGCTTGCAGAATaGGCTTTTTCAGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSGELAE*AFSAPL
Trigger: GAGAGGTGCTGAAAAAGCCAATTCTGCAAGCTCTCC...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACACAGGGATGCAGCACGAGAAACACAACCACGAAGAGGAGAGTCCTCCATGCATCCTCACACACTGCCTaGATGGAGGGGAAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: TQGCSTRNTTTKRRVLHASSHTA*MEGKKD
Trigger: ATCTTTCTTCCCCTCCATCAAGGCAGTGTGTGAGGA...TGCATGGAGGACTCTCCTCTTCGTGGTTGTGTTTCTCGTGCTGCATCCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 90 bp CAGTTTTCAACCTCAGAAGTCTTCAGTACTCCTTTGGGGGCAGACTaGTGCTTTATTCTGGAAGATACGCCTGAACGGGCTCTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: QFSTSEVFSTPLGAD*CFILEDTPERALGS
Trigger: GCTACCCAGAGCCCGTTCAGGCGTATCTTCCAGAATAAAGCAGCAGTCTGCCCCCAAAGGAGTACTGAAGACTTCTGAGGTTGAAAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 90 bp CAGAAGTCTTCAGTACTCCTTTGGGGGCAGACTGCTGCTTTATTCTaGAAGATACGCCTGAACGGGCTCTGGGTAGCATTCCTTGATAGG +
Preference number: 5 (lower is better)
Translates to: QKSSVLLWGQTAALF*KIRLNGLWVAFLDR
Trigger: CCTATCAAGGAATGCTACCCAGAGCCCGTTCAGGCGTATCTTCCAGAATAAAGCAGCAGTCTGCCCCCAAAGGAGTACTGAAGACTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp CATTGGTCTTTGGGGGTTTCTTCCTCTCATGAACCCAAGGCTGATGGTGGCTCCTGGATCAGGTCATCGTaGTACATGTCCTGGGTATTG +
Preference number: 5 (lower is better)
Translates to: HWSLGVSSSHEPKADGGSWIRSS*YMSWVL
Trigger: CAATACCCAGGACATGTACAACGATGACCTGATCCA...GGAGCCACCATCAGCCTTGGGTTCATGAGAGGAAGAAACCCCCAAAGACCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTTCCAGGCATTGGTCTTaGGGGGTTTCTTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: CMVPQLHGRQCITLMTWASRHWS*GVSSSH
Trigger: ATGAGAGGAAGAAACCCCCAAAGACCAATGCCTGGA...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CCCCTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGACAAGAGGTGAAGTTCTaGTTTATTGTTGCAGCAACT +
Preference number: 5 (lower is better)
Translates to: PLVVNIGNGYTTGSRDPGQEVKF*FIVAAT
Trigger: AGTTGCTGCAACAATAAACAAGAACTTCACCTCTTG...TCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 90 bp CTCCTTCCTTCCTGGACGGACGCTATAAAGTCTGCAGCTTTGCTGTaGTCTACGTCCTTTCTGTCAAGGTGGCCTAGAATAACTTGTCCT +
Preference number: 5 (lower is better)
Translates to: LLPSWTDAIKSAALL*STSFLSRWPRITCP
Trigger: AGGACAAGTTATTCTAGGCCACCTTGACAGAAAGGACGTAGAGCACAGCAAAGCTGCAGACTTTATAGCGTCCGTCCAGGAAGGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 90 bp AGGTGGAGATGCAGTGGAGAACAAGGAAGACAAATGAGCTCATTGTaGTGGCTTCCAGTCTGGCTTTCTCTAGAAAGGGGTAGGCATGAG +
Preference number: 5 (lower is better)
Translates to: RWRCSGEQGRQMSSL*WLPVWLSLERGRHE
Trigger: CTCATGCCTACCCCTTTCTAGAGAAAGCCAGACTGGAAGCCAGCACAATGAGCTCATTTGTCTTCCTTGTTCTCCACTGCATCTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 90 bp AAGGCAACGTGCAGTTTTCAACCTCAGAAGTCTTCAGTACTCCTTTaGGGGCAGACTGCTGCTTTATTCTGGAAGATACGCCTGAACGGG +
Preference number: 5 (lower is better)
Translates to: KATCSFQPQKSSVLL*GQTAALFWKIRLNG
Trigger: CCCGTTCAGGCGTATCTTCCAGAATAAAGCAGCAGTCTGCCCCCAAAGGAGTACTGAAGACTTCTGAGGTTGAAAACTGCACGTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 90 bp GGAGAACAAGGAAGACAAATGAGCTCATTGTGCTGGCTTCCAGTCTaGCTTTCTCTAGAAAGGGGTAGGCATGAGTCCCACGTTGTTAGG +
Preference number: 5 (lower is better)
Translates to: GEQGRQMSSLCWLPV*LSLERGRHESHVVR
Trigger: CCTAACAACGTGGGACTCATGCCTACCCCTTTCTAGAGAAAGCCAGACTGGAAGCCAGCACAATGAGCTCATTTGTCTTCCTTGTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 90 bp TGGAGATGCAGTGGAGAACAAGGAAGACAAATGAGCTCATTGTGCTaGCTTCCAGTCTGGCTTTCTCTAGAAAGGGGTAGGCATGAGTCC +
Preference number: 5 (lower is better)
Translates to: WRCSGEQGRQMSSLC*LPVWLSLERGRHES
Trigger: GGACTCATGCCTACCCCTTTCTAGAGAAAGCCAGACTGGAAGCCAGCACAATGAGCTCATTTGTCTTCCTTGTTCTCCACTGCATCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp CTGGTTGTAAACATTGGTAACGGCTACACCACTGGGTCGAGGGACCCGGGAAGGCAAGAGGTGAAGTTCTaGTTTATTGTTGCAGCAACT +
Preference number: 5 (lower is better)
Translates to: LVVNIGNGYTTGSRDPGRQEVKF*FIVAAT
Trigger: AGTTGCTGCAACAATAAACAAGAACTTCACCTCTTG...CCTTCCCGGGTCCCTCGACCCAGTGGTGTAGCCGTTACCAATGTTTACAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTGCGGTGTCCGTGTGGTaGTGGAAGCCGCTCTCCGTG +
Preference number: 5 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSAVSVW*WKPLSV
Trigger: CACGGAGAGCGGCTTCCACAACCACACGGACACCGC...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CAA 90 bp TGTATGGTGCCCCAACTACATGGCAGGCAGTGCATAACCTTAATGACGTGGGCTATCATGCGCACGTTTTaGGAAGGAGTTTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: CMVPQLHGRQCITLMTWAIMRTF*EGVLSE
Trigger: CTCAGACAAAACTCCTTCCAAAAACGTGCGCATGAT...AGCCCACGTCATTAAGGTTATGCACTGCCTGCCATGTAGTTGGGGCACCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCAAGAAGAAAGTTGGTCTaGCCTTGGGCCAGAAAACAA +
Preference number: 5 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPRRKLV*PWARKQ
Trigger: TTGTTTTCTGGCCCAAGGCAAGACCAACTTTCTTCT...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACAGGCATGGGCCCCTACGATGATTTTCCAAGGCTCCTGATGCCTGAAATACCACACAGAACTCTCTGGTaGAAGTCTCTTGTCCCTAAT +
Preference number: 5 (lower is better)
Translates to: TGMGPYDDFPRLLMPEIPHRTLW*KSLVPN
Trigger: ATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTG...TGGTATTTCAGGCATCAGGAGCCTTGGAAAATCATCGTAGGGGCCCATGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCGGTGAAGAGATGTGCTaGATGACTCTGCACCCAAGG +
Preference number: 5 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTGEEMC*MTLHPR
Trigger: CCTTGGGTGCAGAGTCATCAAGCACATCTCTTCACC...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCACGTTCTCCTGGGAGTaGGAGCGAGGCATCCGCCGG +
Preference number: 5 (lower is better)
Translates to: TNTILYFSRHFTISSISPTFSWE*ERGIRR
Trigger: CCGGCGGATGCCTCGCTCCAACTCCCAGGAGAACGT...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAACGACGCTCTGTCCATaGATTTCAATGATCCGGTGC +
Preference number: 5 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVATTLCP*ISMIRC
Trigger: GCACCGGATCATTGAAATCAATGGACAGAGCGTCGT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCAATTGCACCTGCAGCTaGCCTTCTTGGGAACAGTCC +
Preference number: 5 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTNCTCS*PSWEQS
Trigger: GGACTGTTCCCAAGAAGGCAAGCTGCAGGTGCAATT...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGAATTTCTGGGCCATCTaGATCCTGCTTACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVNFWAI*ILLTAS
Trigger: GGAAGCCGTAAGCAGGATCAAGATGGCCCAGAAATT...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGAAAACAAGACGCAATaGCACCTGCAGCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVENKTQ*HLQLAF
Trigger: GAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTC...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGGCAAGAGATCTCGGGGAATaGATCACAGAACTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LPLTGCEDTPGLTQKNVARDLGE*ITELSG
Trigger: ACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCT...TGCCACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS TCA 90 bp GAGCTTATTTGCCAGTGGAACTCTATTAATGACAAGCACTTAGCCTaGCTAGAATGCTACAGGGCACAGTGGGAGGAAAGATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: ELICQWNSINDKHLA*LECYRAQWEERCFT
Trigger: TGTGAAGCATCTTTCCTCCCACTGTGCCCTGTAGCATTCTAGTCAGGCTAAGTGCTTGTCATTAATAGAGTTCCACTGGCAAATAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp CAACTTCCACTCACTGGGTGTGAAGACACACCTGGATTAACACAAAAGAATGTGTACATGTCCTGGGTATaGAGCAGGTCACTATACTCC +
Preference number: 5 (lower is better)
Translates to: QLPLTGCEDTPGLTQKNVYMSWV*SRSLYS
Trigger: GGAGTATAGTGACCTGCTCAATACCCAGGACATGTA...CACATTCTTTTGTGTTAATCCAGGTGTGTCTTCACACCCAGTGAGTGGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCTACATGTCCTGGGTATaGAGCAGGTCACTATACTCC +
Preference number: 5 (lower is better)
Translates to: PSLESLHSLYKYMLPTICYMSWV*SRSLYS
Trigger: GGAGTATAGTGACCTGCTCAATACCCAGGACATGTA...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp CCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCATTTGCTGGATCAGGTCATCGTaGTACATGTCCTGGGTATTG +
Preference number: 5 (lower is better)
Translates to: PSLESLHSLYKYMLPTICWIRSS*YMSWVL
Trigger: CAATACCCAGGACATGTACAACGATGACCTGATCCA...GCAAATGGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCTCCTCGATGGCCTCCTaGATGTCCTTGATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TNTILYFSRHFTISSISPSSMAS*MSLMAS
Trigger: GCTGGCCATCAAGGACATCAAGGAGGCCATCGAGGA...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS-3UTR CAA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGATCTCCCCAACAGCATaGGAGAGAATGTGGACGATC +
Preference number: 5 (lower is better)
Translates to: CSLSSYFHRHNINISDAEISPTA*ERMWTI
Trigger: GATCGTCCACATTCTCTCCAATGCTGTTGGGGAGAT...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCAGAGTAAAGAGGTCCTaGTGGATTCTTCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTRVKRS*WILLFL
Trigger: CAGGAAGAGAAGAATCCACAAGGACCTCTTTACTCT...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TGGGTGTGCGGTGTCCACATTCCAGGCTCACGTGTAGATATATTTTATTTATATGACACTATGGTGTCCTaGCCCAAGGCAGTTATTTCC +
Preference number: 5 (lower is better)
Translates to: WVCGVHIPGSRVDIFYLYDTMVS*PKAVIS
Trigger: GGAAATAACTGCCTTGGGCAAGGACACCATAGTGTC...ATATAAATAAAATATATCTACACGTGAGCCTGGAATGTGGACACCGCACACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGTCCAGGCATTGGTCTTaGGGGGTTTCTTCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: CSLSSYFHRHNINISDAESRHWS*GVSSSH
Trigger: ATGAGAGGAAGAAACCCCCAAAGACCAATGCCTGGA...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGTCCCTGAAGGCGGTGTaGATGGGCAATGTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: CSLSSYFHRHNINISDAESLKAV*MGNVQK
Trigger: TTTCTGAACATTGCCCATCAACACCGCCTTCAGGGA...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TTTGCTCCCTCCTTAGAATCCCTCCATTCTCTCTATAAATACATGCTACCCACCGGAAGAAAGATCGAGTaGTGTGCTCAAGTCAACCTA +
Preference number: 5 (lower is better)
Translates to: FAPSLESLHSLYKYMLPTGRKIE*CAQVNL
Trigger: TAGGTTGACTTGAGCACACAACTCGATCTTTCTTCC...GGTGGGTAGCATGTATTTATAGAGAGAATGGAGGGATTCTAAGGAGGGAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TGCTCACTGAGTTCCTATTTCCATAGACACAACATAAATATCTCGGATGCAGAGAGAGATCTCGGGGAATaGATCACAGAACTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: CSLSSYFHRHNINISDAERDLGE*ITELSG
Trigger: ACCAGAGAGTTCTGTGATCAATTCCCCGAGATCTCT...CTCTGCATCCGAGATATTTATGTTGTGTCTATGGAAATAGGAACTCAGTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTTGTGATGGGTTGACCTaGAGGCTGGTCTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSCDGLT*RLVSQK
Trigger: TTTCTGGGAGACCAGCCTCAAGGTCAACCCATCACA...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp TCCTGGGGTGAGAAGGCTCGTATTAGAAAACACACATACGTTGAAATTAGAACTGAACTTCAACGTAGGTaGGGAATGAAGCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: SWGEKARIRKHTYVEIRTELQRR*GMKPSF
Trigger: AAAGCTTGGCTTCATTCCCAACCTACGTTGAAGTTC...AGTTCTAATTTCAACGTATGTGTGTTTTCTAATACGAGCCTTCTCACCCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTACGACGCTCTGTCCATaGATTTCAATGATCCGGTGC +
Preference number: 5 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSTTLCP*ISMIRC
Trigger: GCACCGGATCATTGAAATCAATGGACAGAGCGTCGT...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTGAAAACAAGACGCAATaGCACCTGCAGCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSENKTQ*HLQLAF
Trigger: GAAGGCAAGCTGCAGGTGCAATTGCGTCTTGTTTTC...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS-3UTR CAA 90 bp GATCACAGAACTCTCTGGTTGAAGTCTCTTGTCCCTAATCTTGTTATAGTCACTCACAGAACTCTCTGGTaGAAGTCTCTTGTCCCTAAT +
Preference number: 5 (lower is better)
Translates to: DHRTLWLKSLVPNLVIVTHRTLW*KSLVPN
Trigger: ATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTG...AGTGACTATAACAAGATTAGGGACAAGAGACTTCAACCAGAGAGTTCTGTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS TCA 90 bp GGGTTAACAACACCTACCTCACAATGTTCTCTACCCCATCCATTTTaGGGAGTAAATGAGATTGAGATAATGCATGTGAAGGGCCTAATA +
Preference number: 5 (lower is better)
Translates to: GLTTPTSQCSLPHPF*GVNEIEIMHVKGLI
Trigger: TATTAGGCCCTTCACATGCATTATCTCAATCTCATTTACTCCTCAAAATGGATGGGGTAGAGAACATTGTGAGGTAGGTGTTGTTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 90 bp TGTGTATTGGTTAAATTTATTCCTAAAGGGCCTATCACAGGAGTCTaGACAGCAACAGTTGGCATTTGGGGCCAAATTCCTTTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: CVLVKFIPKGPITGV*TATVGIWGQIPLFL
Trigger: AAGAAACAAAGGAATTTGGCCCCAAATGCCAACTGTTGCTGTGCAGACTCCTGTGATAGGCCCTTTAGGAATAAATTTAACCAATACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 90 bp CCCAAGTCCAAATCCAATAAGCAATGTTCAATTTTAGTATACAGTTaGTACTACATGAGTGGCGGACACCACAATCGACAAATGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PKSKSNKQCSILVYS*YYMSGGHHNRQMEE
Trigger: CTCTTCCATTTGTCGATTGTGGTGTCCGCCACTCATGTAGTACCAACTGTATACTAAAATTGAACATTGCTTATTGGATTTGGACTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp ACAAATACAATACTATACTTCTCCCGACACTTTACAATAAGCTCTATTTCACCCACGTGGCAGATCATCTaGTACTGCCTTTTCCCATCC +
Preference number: 5 (lower is better)
Translates to: TNTILYFSRHFTISSISPTWQII*YCLFPS
Trigger: GGATGGGAAAAGGCAGTACAAGATGATCTGCCACGT...GGGTGAAATAGAGCTTATTGTAAAGTGTCGGGAGAAGTATAGTATTGTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 90 bp TGGCTTGTTTTTACTGCAAGTTTCTCAAGCTCAAGAACTGTGTATTaGTTAAATTTATTCCTAAAGGGCCTATCACAGGAGTCTGCACAG +
Preference number: 5 (lower is better)
Translates to: WLVFTASFSSSRTVY*LNLFLKGLSQESAQ
Trigger: CTGTGCAGACTCCTGTGATAGGCCCTTTAGGAATAAATTTAACCAATACACAGTTCTTGAGCTTGAGAAACTTGCAGTAAAAACAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS-3UTR CAA 90 bp GTGAAGTTCTTGTTTATTGTTGCAGCAACTCTTATACAGACATTAGCGTTCAGTAGAGTAAAGAGGTCCTaGTGGATTCTTCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: VKFLFIVAATLIQTLAFSRVKRS*WILLFL
Trigger: CAGGAAGAGAAGAATCCACAAGGACCTCTTTACTCT...ACTGAACGCTAATGTCTGTATAAGAGTTGCTGCAACAATAAACAAGAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 72 bp TGGTTGGGCAGCGCGCGGCGGTGCGTGGCCTCGGCGTaGTCGGCCTCTGCCTGCTCCGTGTACTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: WLGSARRCVASA*SASACSVYSSA
Trigger: GGCCGAGGAGTACACGGAGCAGGCAGAGGCCGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 72 bp GGAAGTGCAGGTGGTTGGGCAGCGCGCGGCGGTGCGTaGCCTCGGCGTGCTCGGCCTCTGCCTGCTCCGTGT +
Preference number: 6 (lower is better)
Translates to: GSAGGWAARGGA*PRRARPLPAPC
Trigger: ACACGGAGCAGGCAGAGGCCGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CAA 72 bp GCGGCGATCACGTCGCCCTCGGCGGTGTCCGTGTGGTaGTGGAAGCCGCTCTCCGTGCTGGCTGAGCGCGCC +
Preference number: 6 (lower is better)
Translates to: AAITSPSAVSVW*WKPLSVLAERA
Trigger: GGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGACACCGCCGAGGGCGACGTGATCGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CAA 72 bp GCTTCCTCGTGCTCCAGCGAGTGGAAGTGCAGGTGGTaGGGCAGCGCGCGGCGGTGCGTGGCCTCGGCGTGC +
Preference number: 6 (lower is better)
Translates to: ASSCSSEWKCRW*GSARRCVASAC
Trigger: GCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp CAGGTCGGCCTCCACCGACTCGTTCACCTCCCCACCTaGCGCCTCGTCGGTCACCTCCACCTCCGCAGACCC +
Preference number: 6 (lower is better)
Translates to: QVGLHRLVHLPT*RLVGHLHLRRP
Trigger: GGGTCTGCGGAGGTGGAGGTGACCGACGAGGCGGCAGGTGGGGAGGTGAACGAGTCGGTGGAGGCCGACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp GTCGCGCTCCTGCTCGTAGAGCCGCAGGCCGTCGCGTaGGTCCAGCTCGGGCGCGTCCCCTATCTCCTCGTA +
Preference number: 6 (lower is better)
Translates to: VALLLVEPQAVA*VQLGRVPYLLV
Trigger: TACGAGGAGATAGGGGACGCGCCCGAGCTGGACGCACGCGACGGCCTGCGGCTCTACGAGCAGGAGCGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 72 bp CTTCCTCGTGCTCCAGCGAGTGGAAGTGCAGGTGGTTaGGCAGCGCGCGGCGGTGCGTGGCCTCGGCGTGCT +
Preference number: 6 (lower is better)
Translates to: LPRAPASGSAGG*AARGGAWPRRA
Trigger: AGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 72 bp ATGGCTTCCTCGTGCTCCAGCGAGTGGAAGTGCAGGTaGTTGGGCAGCGCGCGGCGGTGCGTGGCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: MASSCSSEWKCR*LGSARRCVASA
Trigger: CGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CAA 90 bp GCATTCATGGCTTCCTCGTGCTCCAGCGAGTGGAAGTGCAGGTGGTaGGGCAGCGCGCGGCGGTGCGTGGCCTCGGCGTGCTCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: AFMASSCSSEWKCRW*GSARRCVASACSAS
Trigger: AGAGGCCGAGCACGCCGAGGCCACGCACCGCCGCGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCATGAATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS TCA 72 bp GTCCGTGTGGTTGTGGAAGCCGCTCTCCGTGCTGGCTaGGCGCGCCAGGCATTCCCCGCGCTCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VRVVVEAALRAG*ARQAFPALLFL
Trigger: GAGGAAGAGGAGCGCGGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp TGCGGCGGCTGCTGCTGTTCCTCTTCCACCTCGGGGTaGTCCAGGTCGGCCTCCACCGACTCGTTCACCTCC +
Preference number: 6 (lower is better)
Translates to: CGGCCCSSSTSG*SRSASTDSFTS
Trigger: GGAGGTGAACGAGTCGGTGGAGGCCGACCTGGAGCACCCCGAGGTGGAAGAGGAACAGCAGCAGCCGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 72 bp CGGTGTCCGTGTGGTTGTGGAAGCCGCTCTCCGTGCTaGCTGAGCGCGCCAGGCATTCCCCGCGCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: RCPCGCGSRSPC*LSAPGIPRAPL
Trigger: AAGAGGAGCGCGGGGAATGCCTGGCGCGCTCAGCCAGCACGGAGAGCGGCTTCCACAACCACACGGACACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 72 bp CCATCCTGGGATGGGTGGGACGCTTCCACGTTCTCCTaGGAGTTGGAGCGAGGCATCCGCCGGCGGGCCATC +
Preference number: 6 (lower is better)
Translates to: PSWDGWDASTFS*ELERGIRRRAI
Trigger: GATGGCCCGCCGGCGGATGCCTCGCTCCAACTCCCAGGAGAACGTGGAAGCGTCCCACCCATCCCAGGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265381.7
ENST00000470082.2
ENST00000617471.3
ENST00000620509.2
CDS CCA 72 bp GGGATGGGTGGGACGCTTCCACGTTCTCCTGGGAGTTaGAGCGAGGCATCCGCCGGCGGGCCATCAGCACAA +
Preference number: 6 (lower is better)
Translates to: GMGGTLPRSPGS*SEASAGGPSAQ
Trigger: TTGTGCTGATGGCCCGCCGGCGGATGCCTCGCTCCAACTCCCAGGAGAACGTGGAAGCGTCCCACCCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265381.7
ENST00000470082.2
ENST00000617471.3
ENST00000620509.2
CDS CAA 72 bp TGGGATGGGTGGGACGCTTCCACGTTCTCCTGGGAGTaGGAGCGAGGCATCCGCCGGCGGGCCATCAGCACA +
Preference number: 6 (lower is better)
Translates to: WDGWDASTFSWE*ERGIRRRAIST
Trigger: TGTGCTGATGGCCCGCCGGCGGATGCCTCGCTCCAACTCCCAGGAGAACGTGGAAGCGTCCCACCCATCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265381.7
ENST00000470082.2
ENST00000617471.3
ENST00000620509.2
CDS CAA 90 bp GGACGCTCCAGGTCCTGCTCGGCCTCAGGCATGTCCTCGGCTGCCTaGTCGAGGCTCTGCGAGCTCATGCTCTGCTTCACCTCGGCCACT +
Preference number: 6 (lower is better)
Translates to: GRSRSCSASGMSSAA*SRLCELMLCFTSAT
Trigger: AGTGGCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCTGAGGCCGAGCAGGACCTGGAGCGTCC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp TCTGGTCGATGTCCTCCTCCTGCTCGTAGCTGTCCATaGGCGGGTAGGGCGCGAACTCGGCCTCCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: SGRCPPPARSCP*AGRARTRPPSR
Trigger: CCGAGAAGGAGGCCGAGTTCGCGCCCTACCCGCGCATGGACAGCTACGAGCAGGAGGAGGACATCGACCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CAA 72 bp GGAGAGAAGCTGGGCCCGGCTCACTGCGCTCTCATTTaGCTCCACTGGGCTTGCCTGACAGCTGGGTCCGCG +
Preference number: 6 (lower is better)
Translates to: GEKLGPAHCALI*LHWACLTAGSA
Trigger: CGCGGACCCAGCTGTCAGGCAAGCCCAGTGGAGCAAAATGAGAGCGCAGTGAGCCGGGCCCAGCTTCTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp CTCCAGGTCCTGCTCGGCCTCAGGCATGTCCTCGGCTaGCTTGTCGAGGCTCTGCGAGCTCATGCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LQVLLGLRHVLG*LVEALRAHALL
Trigger: AAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCTGAGGCCGAGCAGGACCTGGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CAA 72 bp AGGTCCTGCTCGGCCTCAGGCATGTCCTCGGCTGCCTaGTCGAGGCTCTGCGAGCTCATGCTCTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: RSCSASGMSSAA*SRLCELMLCFT
Trigger: GGTGAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCTGAGGCCGAGCAGGACCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS TCA 72 bp ACCGCGGTGGAAGAGCCGGTGCGTGTAGACGTAGCCTaGGTAGGCCGCATTCATGGCTTCCTCGTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: TAVEEPVRVDVA*VGRIHGFLVLQ
Trigger: CTGGAGCACGAGGAAGCCATGAATGCGGCCTACTCAGGCTACGTCTACACGCACCGGCTCTTCCACCGCGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp GCCTCAGGCATGTCCTCGGCTGCCTTGTCGAGGCTCTaGGAGCTCATGCTCTGCTTCACCTCGGCCACTATC +
Preference number: 6 (lower is better)
Translates to: ASGMSSAALSRL*ELMLCFTSATI
Trigger: GATAGTGGCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACATGCCTGAGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp CAGAGCAGTGTCTCCCAAGCACATGTGGGCACCTGGTaGAAGCTCCTTCCACTTGAGCCCAGCCCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: QSSVSQAHVGTW*KLLPLEPSPAC
Trigger: GCAGGCTGGGCTGGGCTCAAGTGGAAGGAGCTTGCACCAGGTGCCCACATGTGCTTGGGAGACACTGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp CTCTGGTCGTCACAGTCCCTGGTGGGGCTAATGTCCTaGCGCATGACCCAGATGGGCTCTTTGGGCTCGTCG +
Preference number: 6 (lower is better)
Translates to: LWSSQSLVGLMS*RMTQMGSLGSS
Trigger: CGACGAGCCCAAAGAGCCCATCTGGGTCATGCGCCAGGACATTAGCCCCACCAGGGACTGTGACGACCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 72 bp CTGCCAGGAGACGGAGAATCTCCGTCCATCGGCCTCTaGTCGTCACAGTCCCTGGTGGGGCTAATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LPGDGESPSIGL*SSQSLVGLMSW
Trigger: CCAGGACATTAGCCCCACCAGGGACTGTGACGACCAGAGGCCGATGGACGGAGATTCTCCGTCTCCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 72 bp ACGAAGAGGAGAGTCCTCCATGCATGCCACCGCGTGTaGCCGCGGTCAGATGTAAACAGGCTGCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: TKRRVLHACHRV*PRSDVNRLLLG
Trigger: GCCCAGGAGCAGCCTGTTTACATCTGACCGCGGCCACACGCGGTGGCATGCATGGAGGACTCTCCTCTTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 72 bp TCGGAACGGCTAGGAGAGAAGCTGGGCCCGGCTCACTaGGCTCTCATTTTGCTCCACTGGGCTTGCCTGACA +
Preference number: 6 (lower is better)
Translates to: SERLGEKLGPAH*ALILLHWACLT
Trigger: TGTCAGGCAAGCCCAGTGGAGCAAAATGAGAGCGCAGTGAGCCGGGCCCAGCTTCTCTCCTAGCCGTTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp TGTCCTCGGCTGCCTTGTCGAGGCTCTGCGAGCTCATaGTCTGCTTCACCTCGGCCACTATCTGGTCGATGT +
Preference number: 6 (lower is better)
Translates to: CPRLPCRGSASS*SASPRPLSGRC
Trigger: ACATCGACCAGATAGTGGCCGAGGTGAAGCAGAGCATGAGCTCGCAGAGCCTCGACAAGGCAGCCGAGGACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS GCA 72 bp TGGACGCTTCCACAGGGTCACTGGGGTGAAGAGATGTaGTTGATGACTCTGCACCCAAGGGGGAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: WTLPQGHWGEEM*LMTLHPRGRSC
Trigger: GCAGCTCCTCCCCCTTGGGTGCAGAGTCATCAAGCACATCTCTTCACCCCAGTGACCCTGTGGAAGCGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 72 bp GGTGCGTGTAGACGTAGCCTGAGTAGGCCGCATTCATaGCTTCCTCGTGCTCCAGCGAGTGGAAGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: GACRRSLSRPHS*LPRAPASGSAG
Trigger: ACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCATGAATGCGGCCTACTCAGGCTACGTCTACACGCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CAA 72 bp CGGATGGTCCTGGTTTTCACCTCCTCGATGGCCTCCTaGATGTCCTTGATGGCCAGCGAGATGGCATCGCGC +
Preference number: 6 (lower is better)
Translates to: RMVLVFTSSMAS*MSLMASEMASR
Trigger: GCGCGATGCCATCTCGCTGGCCATCAAGGACATCAAGGAGGCCATCGAGGAGGTGAAAACCAGGACCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CAA 72 bp ACGCTTCCACAGGGTCACTGGGGTGAAGAGATGTGCTaGATGACTCTGCACCCAAGGGGGAGGAGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: TLPQGHWGEEMC*MTLHPRGRSCQ
Trigger: CTGGCAGCTCCTCCCCCTTGGGTGCAGAGTCATCAAGCACATCTCTTCACCCCAGTGACCCTGTGGAAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CAA 90 bp CGGATGGTCCTGGTTTTCACCTCCTCGATGGCCTCCTTGATGTCCTaGATGGCCAGCGAGATGGCATCGCGCTTCTCCTTGCTGTACCGC +
Preference number: 6 (lower is better)
Translates to: RMVLVFTSSMASLMS*MASEMASRFSLLYR
Trigger: GCGGTACAGCAAGGAGAAGCGCGATGCCATCTCGCTGGCCATCAAGGACATCAAGGAGGCCATCGAGGAGGTGAAAACCAGGACCATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CCA 72 bp CCACCAAACCTGGGGAAGCTAACAGCACCATTCACCTaGAAGCCCAGGTGGCATATCTGGTACCCATGGGGC +
Preference number: 6 (lower is better)
Translates to: PPNLGKLTAPFT*KPRWHIWYPWG
Trigger: GCCCCATGGGTACCAGATATGCCACCTGGGCTTCCAGGTGAATGGTGCTGTTAGCTTCCCCAGGTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp CTGGTTTTCACCTCCTCGATGGCCTCCTTGATGTCCTaGATGGCCAGCGAGATGGCATCGCGCTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LVFTSSMASLMS*MASEMASRFSL
Trigger: CAAGGAGAAGCGCGATGCCATCTCGCTGGCCATCAAGGACATCAAGGAGGCCATCGAGGAGGTGAAAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265381.7
CDS CAA 90 bp ATATTCAGCTTCCCAGATTTCTCCGCAGGGCCACCATGCATCATGTaGGCAATGATCACGGTGGGGAGGATGGATCCCCAGCCAGACTCC +
Preference number: 6 (lower is better)
Translates to: IFSFPDFSAGPPCIM*AMITVGRMDPQPDS
Trigger: GGAGTCTGGCTGGGGATCCATCCTCCCCACCGTGATCATTGCCAACATGATGCATGGTGGCCCTGCGGAGAAATCTGGGAAGCTGAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 72 bp GCTCAGGATCAGCACTCTTTGCCCCCAGCTTCCCTTTaGATTGATGAAGTCCGTGTACGCTCCCTGACACAG +
Preference number: 6 (lower is better)
Translates to: AQDQHSLPPASL*IDEVRVRSLTQ
Trigger: CTGTGTCAGGGAGCGTACACGGACTTCATCAATGCAAAGGGAAGCTGGGGGCAAAGAGTGCTGATCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp ATCATCTTGTACTGCCTTTTCCCATCCTGGGATGGGTaGGACGCTTCCACGTTCTCCTGGGAGTTGGAGCGA +
Preference number: 6 (lower is better)
Translates to: IILYCLFPSWDG*DASTFSWELER
Trigger: TCGCTCCAACTCCCAGGAGAACGTGGAAGCGTCCCACCCATCCCAGGATGGGAAAAGGCAGTACAAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 72 bp ACAGCACCATTCACCTGGAAGCCCAGGTGGCATATCTaGTACCCATGGGGCACGTGGAGTCAGAACTATGTC +
Preference number: 6 (lower is better)
Translates to: TAPFTWKPRWHI*YPWGTWSQNYV
Trigger: GACATAGTTCTGACTCCACGTGCCCCATGGGTACCAGATATGCCACCTGGGCTTCCAGGTGAATGGTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp CATCTTCCTTACAGAGCAGTGTCTCCCAAGCACATGTaGGCACCTGGTGCAAGCTCCTTCCACTTGAGCCCA +
Preference number: 6 (lower is better)
Translates to: HLPYRAVSPKHM*APGASSFHLSP
Trigger: TGGGCTCAAGTGGAAGGAGCTTGCACCAGGTGCCCACATGTGCTTGGGAGACACTGCTCTGTAAGGAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp TTCACACACTGGCGGGTCCACCTTTCTCTAAGGCAGTaGTTCCCAAACGCTGGTGCAGAGCAGAATCTCCTG +
Preference number: 6 (lower is better)
Translates to: FTHWRVHLSLRQ*FPNAGAEQNLL
Trigger: CAGGAGATTCTGCTCTGCACCAGCGTTTGGGAACCACTGCCTTAGAGAAAGGTGGACCCGCCAGTGTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp TACAGGGCACAGTGGGAGGAAAGATGCTTCACACACTaGCGGGTCCACCTTTCTCTAAGGCAGTGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: YRAQWEERCFTH*RVHLSLRQWFP
Trigger: TGGGAACCACTGCCTTAGAGAAAGGTGGACCCGCCAGTGTGTGAAGCATCTTTCCTCCCACTGTGCCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp CGAGCTTTGGTACAGGGATGCTGTGTACCCCGAACATaGCTTTACGTTCAAGTGATGTGCCCCGTGCCCGCT +
Preference number: 6 (lower is better)
Translates to: RALVQGCCVPRT*LYVQVMCPVPA
Trigger: AGCGGGCACGGGGCACATCACTTGAACGTAAAGCAATGTTCGGGGTACACAGCATCCCTGTACCAAAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS TCA 72 bp TGGAGACACAAACACCACACTCTGGGTGGATGGACATaGAGCAGTCTCTGTGGTTCAGGTAGGGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: WRHKHHTLGGWT*SSLCGSGRAQQ
Trigger: CTGCTGAGCCCTACCTGAACCACAGAGACTGCTTCATGTCCATCCACCCAGAGTGTGGTGTTTGTGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 72 bp CTGGTATGCCACGCTAAATGCCTGTCCGATGGACTGTaGAATCAGCTGAGCATCCTCAGACTCGAAGACGTG +
Preference number: 6 (lower is better)
Translates to: LVCHAKCLSDGL*NQLSILRLEDV
Trigger: CACGTCTTCGAGTCTGAGGATGCTCAGCTGATTGCACAGTCCATCGGACAGGCATTTAGCGTGGCATACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 72 bp TTACGGCTTCCTGGGCCTGCATCATGCGCACGTTTTTaGAAGGAGTTTTGTCTGAGAGCAGCTGAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: LRLPGPASCARF*KEFCLRAAEWS
Trigger: GCTCCACTCAGCTGCTCTCAGACAAAACTCCTTCCAAAAACGTGCGCATGATGCAGGCCCAGGAAGCCGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265381.7
ENST00000470082.2
ENST00000617471.3
ENST00000620509.2
CDS CCA 72 bp CCAACAGCATTGGAGAGAATGTGGACGATCTTCTCGTaGGGGGTGGCCACGACGCTCTGTCCATTGATTTCA +
Preference number: 6 (lower is better)
Translates to: PTALERMWTIFS*GVATTLCPLIS
Trigger: TGAAATCAATGGACAGAGCGTCGTGGCCACCCCCCACGAGAAGATCGTCCACATTCTCTCCAATGCTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS TCA 72 bp TCTTTATTAGTGGACGCTTCCACAGGGTCACTGGGGTaGAGAGATGTGCTTGATGACTCTGCACCCAAGGGG +
Preference number: 6 (lower is better)
Translates to: SLLVDASTGSLG*RDVLDDSAPKG
Trigger: CCCCTTGGGTGCAGAGTCATCAAGCACATCTCTTCACCCCAGTGACCCTGTGGAAGCGTCCACTAATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 72 bp ATTGGCCCTGAGGAATTCCTGGTATGCCACGCTAAATaGCTGTCCGATGGACTGTGCAATCAGCTGAGCATC +
Preference number: 6 (lower is better)
Translates to: IGPEEFLVCHAK*LSDGLCNQLSI
Trigger: GATGCTCAGCTGATTGCACAGTCCATCGGACAGGCATTTAGCGTGGCATACCAGGAATTCCTCAGGGCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS GCA 72 bp GGGGTTAATCCCATTGGCCCTGAGGAATTCCTGGTATaGCACGCTAAATGCCTGTCCGATGGACTGTGCAAT +
Preference number: 6 (lower is better)
Translates to: GVNPIGPEEFLV*HAKCLSDGLCN
Trigger: ATTGCACAGTCCATCGGACAGGCATTTAGCGTGGCATACCAGGAATTCCTCAGGGCCAATGGGATTAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS CCA 72 bp TTCACCTGGAAGCCCAGGTGGCATATCTGGTACCCATaGGGCACGTGGAGTCAGAACTATGTCTCTATGTCT +
Preference number: 6 (lower is better)
Translates to: FTWKPRWHIWYP*GTWSQNYVSMS
Trigger: AGACATAGAGACATAGTTCTGACTCCACGTGCCCCATGGGTACCAGATATGCCACCTGGGCTTCCAGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp TCAGTACTCCTTTGGGGGCAGACTGCTGCTTTATTCTaGAAGATACGCCTGAACGGGCTCTGGGTAGCATTC +
Preference number: 6 (lower is better)
Translates to: SVLLWGQTAALF*KIRLNGLWVAF
Trigger: GAATGCTACCCAGAGCCCGTTCAGGCGTATCTTCCAGAATAAAGCAGCAGTCTGCCCCCAAAGGAGTACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp CTTCCTTCCTGGACGGACGCTATAAAGTCTGCAGCTTaGCTGTGCTCTACGTCCTTTCTGTCAAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LPSWTDAIKSAA*LCSTSFLSRWP
Trigger: AGGCCACCTTGACAGAAAGGACGTAGAGCACAGCAAAGCTGCAGACTTTATAGCGTCCGTCCAGGAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 72 bp ACCTCAGAAGTCTTCAGTACTCCTTTGGGGGCAGACTaGTGCTTTATTCTGGAAGATACGCCTGAACGGGCT +
Preference number: 6 (lower is better)
Translates to: TSEVFSTPLGAD*CFILEDTPERA
Trigger: AGCCCGTTCAGGCGTATCTTCCAGAATAAAGCAGCAGTCTGCCCCCAAAGGAGTACTGAAGACTTCTGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp GGTCCACCTTTCTCTAAGGCAGTGGTTCCCAAACGCTaGTGCAGAGCAGAATCTCCTGGAGGGTTTGTTAAA +
Preference number: 6 (lower is better)
Translates to: GPPFSKAVVPKR*CRAESPGGFVK
Trigger: TTTAACAAACCCTCCAGGAGATTCTGCTCTGCACCAGCGTTTGGGAACCACTGCCTTAGAGAAAGGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp GGAAGACAAATGAGCTCATTGTGCTGGCTTCCAGTCTaGCTTTCTCTAGAAAGGGGTAGGCATGAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: GRQMSSLCWLPV*LSLERGRHESH
Trigger: GTGGGACTCATGCCTACCCCTTTCTAGAGAAAGCCAGACTGGAAGCCAGCACAATGAGCTCATTTGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 90 bp CAAGGCAACGTGCAGTTTTCAACCTCAGAAGTCTTCAGTACTCCTTaGGGGGCAGACTGCTGCTTTATTCTGGAAGATACGCCTGAACGG +
Preference number: 6 (lower is better)
Translates to: QGNVQFSTSEVFSTP*GADCCFILEDTPER
Trigger: CCGTTCAGGCGTATCTTCCAGAATAAAGCAGCAGTCTGCCCCCAAAGGAGTACTGAAGACTTCTGAGGTTGAAAACTGCACGTTGCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 90 bp GCAAGGTGGAGATGCAGTGGAGAACAAGGAAGACAAATGAGCTCATaGTGCTGGCTTCCAGTCTGGCTTTCTCTAGAAAGGGGTAGGCAT +
Preference number: 6 (lower is better)
Translates to: ARWRCSGEQGRQMSS*CWLPVWLSLERGRH
Trigger: ATGCCTACCCCTTTCTAGAGAAAGCCAGACTGGAAGCCAGCACAATGAGCTCATTTGTCTTCCTTGTTCTCCACTGCATCTCCACCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 72 bp TCCTGGACGGACGCTATAAAGTCTGCAGCTTTGCTGTaGTCTACGTCCTTTCTGTCAAGGTGGCCTAGAATA +
Preference number: 6 (lower is better)
Translates to: SWTDAIKSAALL*STSFLSRWPRI
Trigger: TATTCTAGGCCACCTTGACAGAAAGGACGTAGAGCACAGCAAAGCTGCAGACTTTATAGCGTCCGTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 72 bp CTTTCTCCTTCCTTCCTGGACGGACGCTATAAAGTCTaGAGCTTTGCTGTGCTCTACGTCCTTTCTGTCAAG +
Preference number: 6 (lower is better)
Translates to: LSPSFLDGRYKV*SFAVLYVLSVK
Trigger: CTTGACAGAAAGGACGTAGAGCACAGCAAAGCTGCAGACTTTATAGCGTCCGTCCAGGAAGGAAGGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 72 bp CCACCTTTCTCTAAGGCAGTGGTTCCCAAACGCTGGTaGAGAGCAGAATCTCCTGGAGGGTTTGTTAAAACA +
Preference number: 6 (lower is better)
Translates to: PPFSKAVVPKRW*RAESPGGFVKT
Trigger: TGTTTTAACAAACCCTCCAGGAGATTCTGCTCTGCACCAGCGTTTGGGAACCACTGCCTTAGAGAAAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp GCTGCTTTATTCTGGAAGATACGCCTGAACGGGCTCTaGGTAGCATTCCTTGATAGGGGCTCTTTGGCATTT +
Preference number: 6 (lower is better)
Translates to: AALFWKIRLNGL*VAFLDRGSLAF
Trigger: AAATGCCAAAGAGCCCCTATCAAGGAATGCTACCCAGAGCCCGTTCAGGCGTATCTTCCAGAATAAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 72 bp TGCAGTGGAGAACAAGGAAGACAAATGAGCTCATTGTaGTGGCTTCCAGTCTGGCTTTCTCTAGAAAGGGGT +
Preference number: 6 (lower is better)
Translates to: CSGEQGRQMSSL*WLPVWLSLERG
Trigger: ACCCCTTTCTAGAGAAAGCCAGACTGGAAGCCAGCACAATGAGCTCATTTGTCTTCCTTGTTCTCCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp TGCCTGAGAAGCAGCTTGCTCTCTCTGAGAGGTTTGTaGGTTGTTGTTTTGAATGCTGTGCCTGGAAGACAA +
Preference number: 6 (lower is better)
Translates to: CLRSSLLSLRGL*VVVLNAVPGRQ
Trigger: TTGTCTTCCAGGCACAGCATTCAAAACAACAACCCACAAACCTCTCAGAGAGAGCAAGCTGCTTCTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp GCAGCTTTGCTGTGCTCTACGTCCTTTCTGTCAAGGTaGCCTAGAATAACTTGTCCTGAAAGGTCAGTCTCT +
Preference number: 6 (lower is better)
Translates to: AALLCSTSFLSR*PRITCPERSVS
Trigger: AGAGACTGACCTTTCAGGACAAGTTATTCTAGGCCACCTTGACAGAAAGGACGTAGAGCACAGCAAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp CTTTGCCTGAGAAGCAGCTTGCTCTCTCTGAGAGGTTaGTGGGTTGTTGTTTTGAATGCTGTGCCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: LCLRSSLLSLRG*WVVVLNAVPGR
Trigger: TCTTCCAGGCACAGCATTCAAAACAACAACCCACAAACCTCTCAGAGAGAGCAAGCTGCTTCTCAGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 90 bp TTCTTTCTCCTTCCTTCCTGGACGGACGCTATAAAGTCTGCAGCTTaGCTGTGCTCTACGTCCTTTCTGTCAAGGTGGCCTAGAATAACT +
Preference number: 6 (lower is better)
Translates to: FFLLPSWTDAIKSAA*LCSTSFLSRWPRIT
Trigger: AGTTATTCTAGGCCACCTTGACAGAAAGGACGTAGAGCACAGCAAAGCTGCAGACTTTATAGCGTCCGTCCAGGAAGGAAGGAGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS TCA 72 bp GGAGGACATCTCACGATATTCAGCTTGACTCGGGACTaGTTCTTTAAGCCCTTAATAATGCTCTGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: GGHLTIFSLTRD*FFKPLIMLWQV
Trigger: CACCTGCCAGAGCATTATTAAGGGCTTAAAGAATCAGTCCCGAGTCAAGCTGAATATCGTGAGATGTCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265381.7
ENST00000617471.3
CDS TCA 72 bp TGCCAGTGGAACTCTATTAATGACAAGCACTTAGCCTaGCTAGAATGCTACAGGGCACAGTGGGAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: CQWNSINDKHLA*LECYRAQWEER
Trigger: TCTTTCCTCCCACTGTGCCCTGTAGCATTCTAGTCAGGCTAAGTGCTTGTCATTAATAGAGTTCCACTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp TGCAGTTTTCAACCTCAGAAGTCTTCAGTACTCCTTTaGGGGCAGACTGCTGCTTTATTCTGGAAGATACGC +
Preference number: 6 (lower is better)
Translates to: CSFQPQKSSVLL*GQTAALFWKIR
Trigger: GCGTATCTTCCAGAATAAAGCAGCAGTCTGCCCCCAAAGGAGTACTGAAGACTTCTGAGGTTGAAAACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp AAATACAGGAAGAATGGAGACACAAACACCACACTCTaGGTGGATGGACATGAAGCAGTCTCTGTGGTTCAG +
Preference number: 6 (lower is better)
Translates to: KYRKNGDTNTTL*VDGHEAVSVVQ
Trigger: CTGAACCACAGAGACTGCTTCATGTCCATCCACCCAGAGTGTGGTGTTTGTGTCTCCATTCTTCCTGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp GTGCAGTTTTCAACCTCAGAAGTCTTCAGTACTCCTTaGGGGGCAGACTGCTGCTTTATTCTGGAAGATACG +
Preference number: 6 (lower is better)
Translates to: VQFSTSEVFSTP*GADCCFILEDT
Trigger: CGTATCTTCCAGAATAAAGCAGCAGTCTGCCCCCAAAGGAGTACTGAAGACTTCTGAGGTTGAAAACTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp AGATGCAGTGGAGAACAAGGAAGACAAATGAGCTCATaGTGCTGGCTTCCAGTCTGGCTTTCTCTAGAAAGG +
Preference number: 6 (lower is better)
Translates to: RCSGEQGRQMSS*CWLPVWLSLER
Trigger: CCTTTCTAGAGAAAGCCAGACTGGAAGCCAGCACAATGAGCTCATTTGTCTTCCTTGTTCTCCACTGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp CTAAAGGGCCTATCACAGGAGTCTGCACAGCAACAGTaGGCATTTGGGGCCAAATTCCTTTGTTTCTTTTCA +
Preference number: 6 (lower is better)
Translates to: LKGLSQESAQQQ*AFGAKFLCFFS
Trigger: TGAAAAGAAACAAAGGAATTTGGCCCCAAATGCCAACTGTTGCTGTGCAGACTCCTGTGATAGGCCCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS TCA 72 bp GTACGCTCCCTGACACAGTCACTTTTTGGAGAGTGCTaGCTTAAACAGGCATCTCCATTTACACTTGGAAAA +
Preference number: 6 (lower is better)
Translates to: VRSLTQSLFGEC*LKQASPFTLGK
Trigger: TTTTCCAAGTGTAAATGGAGATGCCTGTTTAAGTCAGCACTCTCCAAAAAGTGACTGTGTCAGGGAGCGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 72 bp GTTAAATTTATTCCTAAAGGGCCTATCACAGGAGTCTaGACAGCAACAGTTGGCATTTGGGGCCAAATTCCT +
Preference number: 6 (lower is better)
Translates to: VKFIPKGPITGV*TATVGIWGQIP
Trigger: AGGAATTTGGCCCCAAATGCCAACTGTTGCTGTGCAGACTCCTGTGATAGGCCCTTTAGGAATAAATTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp AATGTAATTCACAATATAATTGGCACTGACGAGCTTTaGTACAGGGATGCTGTGTACCCCGAACATTGCTTT +
Preference number: 6 (lower is better)
Translates to: NVIHNIIGTDEL*YRDAVYPEHCF
Trigger: AAAGCAATGTTCGGGGTACACAGCATCCCTGTACCAAAGCTCGTCAGTGCCAATTATATTGTGAATTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS TCA 72 bp ACACCTACCTCACAATGTTCTCTACCCCATCCATTTTaGGGAGTAAATGAGATTGAGATAATGCATGTGAAG +
Preference number: 6 (lower is better)
Translates to: TPTSQCSLPHPF*GVNEIEIMHVK
Trigger: CTTCACATGCATTATCTCAATCTCATTTACTCCTCAAAATGGATGGGGTAGAGAACATTGTGAGGTAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS GCA 72 bp ATGTCCGAAAAGGAGGTCTATTTTCTTGAGCTTATTTaGCAGTGGAACTCTATTAATGACAAGCACTTAGCC +
Preference number: 6 (lower is better)
Translates to: MSEKEVYFLELI*QWNSINDKHLA
Trigger: GGCTAAGTGCTTGTCATTAATAGAGTTCCACTGGCAAATAAGCTCAAGAAAATAGACCTCCTTTTCGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 90 bp TTGGCTTGTTTTTACTGCAAGTTTCTCAAGCTCAAGAACTGTGTATaGGTTAAATTTATTCCTAAAGGGCCTATCACAGGAGTCTGCACA +
Preference number: 6 (lower is better)
Translates to: LACFYCKFLKLKNCV*VKFIPKGPITGVCT
Trigger: TGTGCAGACTCCTGTGATAGGCCCTTTAGGAATAAATTTAACCAATACACAGTTCTTGAGCTTGAGAAACTTGCAGTAAAAACAAGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp ACCTGTAGCAAATGTCCGAAAAGGAGGTCTATTTTCTaGAGCTTATTTGCCAGTGGAACTCTATTAATGACA +
Preference number: 6 (lower is better)
Translates to: TCSKCPKRRSIF*SLFASGTLLMT
Trigger: TGTCATTAATAGAGTTCCACTGGCAAATAAGCTCAAGAAAATAGACCTCCTTTTCGGACATTTGCTACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp AAATCCAATAAGCAATGTTCAATTTTAGTATACAGTTaGTACTACATGAGTGGCGGACACCACAATCGACAA +
Preference number: 6 (lower is better)
Translates to: KSNKQCSILVYS*YYMSGGHHNRQ
Trigger: TTGTCGATTGTGGTGTCCGCCACTCATGTAGTACCAACTGTATACTAAAATTGAACATTGCTTATTGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CAA 72 bp TTTTACTGCAAGTTTCTCAAGCTCAAGAACTGTGTATaGGTTAAATTTATTCCTAAAGGGCCTATCACAGGA +
Preference number: 6 (lower is better)
Translates to: FYCKFLKLKNCV*VKFIPKGPITG
Trigger: TCCTGTGATAGGCCCTTTAGGAATAAATTTAACCAATACACAGTTCTTGAGCTTGAGAAACTTGCAGTAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1
CDS CCA 72 bp GAATATTTGATAATGAATGCAGCTTGCCAAAATGCATaGACCACAAGATACCTATACACCATTTGTAATCTA +
Preference number: 6 (lower is better)
Translates to: EYLIMNAACQNA*TTRYLYTICNL
Trigger: TAGATTACAAATGGTGTATAGGTATCTTGTGGTCCATGCATTTTGGCAAGCTGCATTCATTATCAAATATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627382.1
ENST00000628769.1