RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000120868

Ensembl transcript IDs: ENST00000333991.5, ENST00000357310.5, ENST00000359972.6, ENST00000546491.1, ENST00000547045.5, ENST00000547666.1, ENST00000547743.1, ENST00000549007.1, ENST00000550527.5, ENST00000551964.6, ENST00000552268.5, ENST00000552929.1, ENST00000555047.1

Found 572 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACAAAATCCTCCTCTTGACCGACTGCATGAACTGCCATGAAATTTaGAGCTCCATCATACTAGGTATCTCTTCTTTCTTCATGTTACCT +
Preference number: 1 (lower is better)
Translates to: NKILLLTDCMNCHEI*SSIILGISSFFMLP
Trigger: AGGTAACATGAAGAAAGAAGAGATACCTAGTATGATGGAGCTGCAAATTTCATGGCAGTTCATGCAGTCGGTCAAGAGGAGGATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR TCA 90 bp ACTACAAAACAAAATCCTCCTCTTGACCGACTGCATGAACTGCCATaGAATTTGCAGCTCCATCATACTAGGTATCTCTTCTTTCTTCAT +
Preference number: 1 (lower is better)
Translates to: TTKQNPPLDRLHELP*NLQLHHTRYLFFLH
Trigger: ATGAAGAAAGAAGAGATACCTAGTATGATGGAGCTGCAAATTTCATGGCAGTTCATGCAGTCGGTCAAGAGGAGGATTTTGTTTTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGGCCACTGCTACCCTaGGGCACAGCCTGCATAACA +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRPLLP*GTACIT
Trigger: TGTTATGCAGGCTGTGCCTCAGGGTAGCAGTGGCCT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGGCCACTGCTACCCTaGGGCACAGCCTGCATAACA +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKARPLLP*GTACIT
Trigger: TGTTATGCAGGCTGTGCCTCAGGGTAGCAGTGGCCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGGCAGGAGGATTGCTTaGACCCAGGAGTCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTGRRIA*TQESEA
Trigger: AGCCTCAGACTCCTGGGTTCAAGCAATCCTCCTGCC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGGCAGGAGGATTGCTTaGACCCAGGAGTCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAGRRIA*TQESEA
Trigger: AGCCTCAGACTCCTGGGTTCAAGCAATCCTCCTGCC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGGCAGGAGAATTGCTTaGACCCAGGAGGCAGCGATT +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTGRRIA*TQEAAI
Trigger: AATCGCTGCCTCCTGGGTTCAAGCAATTCTCCTGCC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCACAAAAAGAACTGCTaGAGGCCAGGCCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAHKKNC*RPGQWL
Trigger: GAGCCACTGGCCTGGCCTTCAGCAGTTCTTTTTGTG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCAAAAAGCAGGCCACTaGTACCCTGAGGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTQKAGH*YPEAQP
Trigger: AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTACTAGAGTCCAGATATaGCACAGGGCTGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTTRVQI*HRAASS
Trigger: GCTGCTGGCAGCCCTGTGCCATATCTGGACTCTAGT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTCCCGGCCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASRPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGGCCGGGA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAAGGCGGGTAGATCATaGGGTCAAGAGATCGAGACC +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAKAGRS*GQEIET
Trigger: GGTCTCGATCTCTTGACCTCATGATCTACCCGCCTT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGGCCACTGCTACCCTaGGGCACAGCCTGCATAACA +
Preference number: 2 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRPLLP*GTACIT
Trigger: TGTTATGCAGGCTGTGCCTCAGGGTAGCAGTGGCCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGTCTGAGGCTGCAATaGGGTATGATTATGCCACTG +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSLRLQ*GMIMPL
Trigger: CAGTGGCATAATCATACCTCATTGCAGCCTCAGACT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTGCCAGCAGCTACAGTaGGAAAAGGGTAGACCAATA +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKACQQLQ*EKGRPI
Trigger: TATTGGTCTACCCTTTTCTCACTGTAGCTGCTGGCA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTTGGCCCCACCTCAATaGCTAACATTTAGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLAPPQ*LTFSSG
Trigger: TCCACTGCTAAATGTTAGTCATTGAGGTGGGGCCAA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTTGGCCCCACCTCAATaGCTAACATTTAGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALAPPQ*LTFSSG
Trigger: TCCACTGCTAAATGTTAGTCATTGAGGTGGGGCCAA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGGCCACTGCTACCCTaGGGCACAGCCTGCATAACA +
Preference number: 2 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRPLLP*GTACIT
Trigger: TGTTATGCAGGCTGTGCCTCAGGGTAGCAGTGGCCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCAAAAAGCAGGCCACTaGTACCCTGAGGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: FQHTSFTSQKELLKARPVQKAGH*YPEAQP
Trigger: AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGGCAGGAGAATTGCTTaGACCCAGGAGGCAGCGATT +
Preference number: 2 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNGRRIA*TQEAAI
Trigger: AATCGCTGCCTCCTGGGTTCAAGCAATTCTCCTGCC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCCCGGCCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSRPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGGCCGGGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAAGGCGGGTAGATCATaGGGTCAAGAGATCGAGACC +
Preference number: 2 (lower is better)
Translates to: FQHTSFTSQKELLKARPVKAGRS*GQEIET
Trigger: GGTCTCGATCTCTTGACCTCATGATCTACCCGCCTT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCACAAAAAGAACTGCTaGAGGCCAGGCCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNHKKNC*RPGQWL
Trigger: GAGCCACTGGCCTGGCCTTCAGCAGTTCTTTTTGTG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGTCCAACTCAGATACTaGCAACTAGAGTCCAGATAT +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAVQLRY*QLESRY
Trigger: ATATCTGGACTCTAGTTGTCAGTATCTGAGTTGGAC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGTCCAACTCAGATACTaGCAACTAGAGTCCAGATAT +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTVQLRY*QLESRY
Trigger: ATATCTGGACTCTAGTTGTCAGTATCTGAGTTGGAC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCAAAAAGCAGGCCACTaGTACCCTGAGGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNQKAGH*YPEAQP
Trigger: AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGAACAAAACCCCCTTaGGGTAAGTGTGGTTCAAAA +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKARTKPP*GKCGSK
Trigger: TTTTGAACCACACTTACCCCAAGGGGGTTTTGTTCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGAACAAAACCCCCTTaGGGTAAGTGTGGTTCAAAA +
Preference number: 2 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRTKPP*GKCGSK
Trigger: TTTTGAACCACACTTACCCCAAGGGGGTTTTGTTCT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAAGGCGGGTAGATCATaGGGTCAAGAGATCGAGACC +
Preference number: 2 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNKAGRS*GQEIET
Trigger: GGTCTCGATCTCTTGACCTCATGATCTACCCGCCTT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCTTCTAGAGTTACAGTaGCTCATCTGGAATTACACA +
Preference number: 2 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALLELQ*LIWNYT
Trigger: TGTGTAATTCCAGATGAGTCACTGTAACTCTAGAAG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGTCTGAGGCTGCAATaGGGTATGATTATGCCACTG +
Preference number: 2 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSLRLQ*GMIMPL
Trigger: CAGTGGCATAATCATACCTCATTGCAGCCTCAGACT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCAGTCACATATGTTTTaGAGTCAGGGGACACGTGTA +
Preference number: 2 (lower is better)
Translates to: FQHTSFTSQKELLKARPVQSHMF*SQGTRV
Trigger: TACACGTGTCCCCTGACTTCAAAACATATGTGACTG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333991.5
3UTR-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGTCTGAGGCTGCAATaGGGTATGATTATGCCACTG +
Preference number: 2 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSLRLQ*GMIMPL
Trigger: CAGTGGCATAATCATACCTCATTGCAGCCTCAGACT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGCCAGCAGCTACAGTaGGAAAAGGGTAGACCAATA +
Preference number: 2 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNCQQLQ*EKGRPI
Trigger: TATTGGTCTACCCTTTTCTCACTGTAGCTGCTGGCA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGAACAAAACCCCCTTaGGGTAAGTGTGGTTCAAAA +
Preference number: 2 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRTKPP*GKCGSK
Trigger: TTTTGAACCACACTTACCCCAAGGGGGTTTTGTTCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGAACAAAACCCCCTTaGGGTAAGTGTGGTTCAAAA +
Preference number: 2 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRTKPP*GKCGSK
Trigger: TTTTGAACCACACTTACCCCAAGGGGGTTTTGTTCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR TCA 72 bp ACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTaGCAACTAGAGTCCAGATATGGCACAGGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: TRGSRNSVQLRY*QLESRYGTGLP
Trigger: TGGCAGCCCTGTGCCATATCTGGACTCTAGTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGGAAAGGAAAATAGGTaGGCTGGAAGGTTAATCTTC +
Preference number: 3 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTGKENR*AGRLIF
Trigger: GAAGATTAACCTTCCAGCCAACCTATTTTCCTTTCC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGGAAAGGAAAATAGGTaGGCTGGAAGGTTAATCTTC +
Preference number: 3 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAGKENR*AGRLIF
Trigger: GAAGATTAACCTTCCAGCCAACCTATTTTCCTTTCC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR TCA 72 bp AGTCCAGATATGGCACAGGGCTGCCAGCAGCTACAGTaGGAAAAGGGTAGACCAATAAAATCTACTCTTTCC +
Preference number: 3 (lower is better)
Translates to: SPDMAQGCQQLQ*EKGRPIKSTLS
Trigger: GGAAAGAGTAGATTTTATTGGTCTACCCTTTTCTCACTGTAGCTGCTGGCAGCCCTGTGCCATATCTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
3UTR TCA 72 bp CAAAATCCTCCTCTTGACCGACTGCATGAACTGCCATaGAATTTGCAGCTCCATCATACTAGGTATCTCTTC +
Preference number: 3 (lower is better)
Translates to: QNPPLDRLHELP*NLQLHHTRYLF
Trigger: GAAGAGATACCTAGTATGATGGAGCTGCAAATTTCATGGCAGTTCATGCAGTCGGTCAAGAGGAGGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGGGACCTCCGAAGGTTaGCGAGGTGGGCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPGTSEG*RGGRPP
Trigger: GGGTGGACGCCCACCTCGCCAACCTTCGGAGGTCCC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCGGCGCTACTCCGGATaGCGCTGCGGCACCTCAAGT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRRYSG*RCGTSS
Trigger: ACTTGAGGTGCCGCAGCGGCATCCGGAGTAGCGCCG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCTGCCGGGACAAGACTaGGAGACTCCAGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPLPGQD*ETPGRW
Trigger: CCACCGGCCTGGAGTCTCCCAGTCTTGTCCCGGCAG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCACAGGCGCCTCCCCTaGATCTCTGCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTHRRLP*ISAAPG
Trigger: CCCCGGGGCTGCAGAGATCCAGGGGAGGCGCCTGTG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCACAGGCGCCTCCCCTaGATCTCTGCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAHRRLP*ISAAPG
Trigger: CCCCGGGGCTGCAGAGATCCAGGGGAGGCGCCTGTG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTCGCGGGTCGCCGACTaGCCAGACTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSRVAD*PDSPPL
Trigger: CAGAGGTGGGGAGTCTGGGCAGTCGGCGACCCGCGA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTCGCGGGTCGCCGACTaGCCAGACTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASRVAD*PDSPPL
Trigger: CAGAGGTGGGGAGTCTGGGCAGTCGGCGACCCGCGA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCGGGCCGCCCTCCGGTaGACCCCACTACTGGACACA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRAALR*TPLLDT
Trigger: TGTGTCCAGTAGTGGGGTCCACCGGAGGGCGGCCCG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGGGACCTCCGAAGGTTaGCGAGGTGGGCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTGTSEG*RGGRPP
Trigger: GGGTGGACGCCCACCTCGCCAACCTTCGGAGGTCCC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGGGACCTCCGAAGGTTaGCGAGGTGGGCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAGTSEG*RGGRPP
Trigger: GGGTGGACGCCCACCTCGCCAACCTTCGGAGGTCCC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGGCCACTGCTACCCTaGGGCACAGCCTGCATAACA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRPLLP*GTACIT
Trigger: TGTTATGCAGGCTGTGCCTCAGGGTAGCAGTGGCCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGGTGGACCCCACTACTaGACACAAAGGGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPGGPHY*TQREEV
Trigger: GACCTCCTCCCTTTGTGTCCAGTAGTGGGGTCCACC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCGAAGGTTGGCGAGGTaGGCGTCCACCCAACGCAGC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRRLAR*ASTQRS
Trigger: GCTGCGTTGGGTGGACGCCCACCTCGCCAACCTTCG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCGAAGGTTGGCGAGGTaGGCGTCCACCCAACGCAGC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKARRLAR*ASTQRS
Trigger: GCTGCGTTGGGTGGACGCCCACCTCGCCAACCTTCG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTGCCGGGACAAGACTaGGAGACTCCAGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLPGQD*ETPGRW
Trigger: CCACCGGCCTGGAGTCTCCCAGTCTTGTCCCGGCAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGGCAGGAGAATTGCTTaGACCCAGGAGGCAGCGATT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPGRRIA*TQEAAI
Trigger: AATCGCTGCCTCCTGGGTTCAAGCAATTCTCCTGCC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCACAAAAAGAACTGCTaGAGGCCAGGCCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPHKKNC*RPGQWL
Trigger: GAGCCACTGGCCTGGCCTTCAGCAGTTCTTTTTGTG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCAGACTCCCCACCTCTaGTTCTATCCCTTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPQTPHL*FYPFCP
Trigger: CGGGCAAAAGGGATAGAACCAGAGGTGGGGAGTCTG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTACTAGAGTCCAGATATaGCACAGGGCTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPTRVQI*HRAASS
Trigger: GCTGCTGGCAGCCCTGTGCCATATCTGGACTCTAGT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAAGGCGGGTAGATCATaGGGTCAAGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPKAGRS*GQEIET
Trigger: GGTCTCGATCTCTTGACCTCATGATCTACCCGCCTT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCCATTATCGACCTCCTaGTTGGCCTGCAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPPLSTS*LACSLA
Trigger: AGCTAAGCTGCAGGCCAAGCAGGAGGTCGATAATGG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGGTCTTCCCGGCCTGTaGCGCCCTTCCCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNGLPGL*RPSPDG
Trigger: GCCGTCGGGGGAAGGGCGCCACAGGCCGGGAAGACC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGAGACTCCAGGCCGGTaGAGGGAAACGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTETPGR*RETATG
Trigger: TCCTGTTGCCGTTTCCCTCCACCGGCCTGGAGTCTC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCCATTCCATGTATGGTaGCCCATCCTGGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPPFHVW*PILVHL
Trigger: AAGGTGAACCAGGATGGGTCACCATACATGGAATGG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTGTGTAGAAGGTCTGTaGGGATTCCCCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPCVEGL*GFPSDN
Trigger: GTTGTCACTGGGGAATCCTCACAGACCTTCTACACA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTCTGCCTACATGAGATaGGCCCCTAACAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSAYMR*APNSVY
Trigger: GTACACACTGTTAGGGGCTCATCTCATGTAGGCAGA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGCGGAGCACACAAATaGAGAAGCTCACCGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSGAHK*RSSPFE
Trigger: CTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGCAGCTCCTTCTTCTaGAAGCGGAGCACACAAATG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSSSFF*KRSTQM
Trigger: CATTTGTGTGCTCCGCTTTCAGAAGAAGGAGCTGCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCGCGGGTCGCCGACTaGCCAGACTCCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSRVAD*PDSPPL
Trigger: CAGAGGTGGGGAGTCTGGGCAGTCGGCGACCCGCGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCCAACTGAAACCCAATaGACTCCCCCTGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPPTETQ*TPPGKQ
Trigger: TTGTTTCCCAGGGGGAGTGCATTGGGTTTCAGTTGG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGCACAAAGTTCCTTGTaGATCTTGGCACTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPAQSSL*ILALAM
Trigger: CATGGCCAGTGCCAAGATGCACAAGGAACTTTGTGC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCGGGCCGCCCTCCGGTaGACCCCACTACTGGACACA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRAALR*TPLLDT
Trigger: TGTGTCCAGTAGTGGGGTCCACCGGAGGGCGGCCCG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCACAGGCGCCTCCCCTaGATCTCTGCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNHRRLP*ISAAPG
Trigger: CCCCGGGGCTGCAGAGATCCAGGGGAGGCGCCTGTG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAACAACTGGCCTCTGTaGTACTCCACCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPNNWPL*YSTFTQ
Trigger: CTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTGTGCATCTTGGCACTaGCCATGTGATAGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPCASWH*PCDRPE
Trigger: TTCTGGCCTATCACATGGCCAGTGCCAAGATGCACA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGTTCCTTGTGCATCTTaGCACTGGCCATGTGATAGG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPVPCAS*HWPCDR
Trigger: CCTATCACATGGCCAGTGCCAAGATGCACAAGGAAC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCTGAGCTGTCAACCATaGGCCAAGCCTTTGCGCCTA +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALSCQP*AKPLRL
Trigger: TAGGCGCAAAGGCTTGGCTCATGGTTGACAGCTCAG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTGAGCTGTCAACCATaGGCCAAGCCTTTGCGCCTA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLSCQP*AKPLRL
Trigger: TAGGCGCAAAGGCTTGGCTCATGGTTGACAGCTCAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGATCTTTCTCTCTCTaGGCTGTCAACCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRSFSL*AVNHEP
Trigger: TGGCTCATGGTTGACAGCTCAGAGAGAGAAAGATCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCCAGCTTCTTCCTTGTaGCAAAAACAACTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPPASSL*QKQLAS
Trigger: AGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTTGGAGAGCTTCTGCTaGATTGCATTCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPLESFC*IAFTSF
Trigger: GAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGGCAGGAGAATTGCTTaGACCCAGGAGGCAGCGATT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAGRRIA*TQEAAI
Trigger: AATCGCTGCCTCCTGGGTTCAAGCAATTCTCCTGCC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGTCTGAGGCTGCAATaGGGTATGATTATGCCACTG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSLRLQ*GMIMPL
Trigger: CAGTGGCATAATCATACCTCATTGCAGCCTCAGACT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTTGGCCCCACCTCAATaGCTAACATTTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPLAPPQ*LTFSSG
Trigger: TCCACTGCTAAATGTTAGTCATTGAGGTGGGGCCAA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTATACTCTGCCTACATaGGATGAGCCCCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPYTLPT*DEPLTV
Trigger: CACTGTTAGGGGCTCATCTCATGTAGGCAGAGTATA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGCAATTGACTTGCTCTaGGTGCTCATCATAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPAIDLL*VLIIGV
Trigger: CACACCTATGATGAGCACTCAGAGCAAGTCAATTGC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGTCAGCAGAGGTAGATaGAAACTTGGTAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPVSRGR*KLGSIV
Trigger: CACGATGCTACCAAGTTTTCATCTACCTCTGCTGAC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTGGCCCCTCAATTCATaGAGTGGCAAAAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPWPLNS*SGKRRS
Trigger: TGATCTCCTTTTGCCACTTCATGAATTGAGGGGCCA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCGGCGCTACTCCGGATaGCGCTGCGGCACCTCAAGT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRRYSG*RCGTSS
Trigger: ACTTGAGGTGCCGCAGCGGCATCCGGAGTAGCGCCG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGGACAAAGCAACCACTaGCAAATGGTTTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPGQSNH*QMVLWG
Trigger: TCCCCACAAAACCATTTGGCAGTGGTTGCTTTGTCC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCAGACTCCCCACCTCTaGTTCTATCCCTTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAQTPHL*FYPFCP
Trigger: CGGGCAAAAGGGATAGAACCAGAGGTGGGGAGTCTG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCGGGCCGCCCTCCGGTaGACCCCACTACTGGACACA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRAALR*TPLLDT
Trigger: TGTGTCCAGTAGTGGGGTCCACCGGAGGGCGGCCCG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCTGCCGGGACAAGACTaGGAGACTCCAGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLPGQD*ETPGRW
Trigger: CCACCGGCCTGGAGTCTCCCAGTCTTGTCCCGGCAG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPTGMPS*RRAARS
Trigger: AGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTGTGACAAAAACAACTaGCCTCTGTGGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPCDKNN*PLWYST
Trigger: GGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGATCAAGAGAGACCTTaGGTGTTTGCGAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPDQERP*VFAKHQ
Trigger: CTGATGCTTCGCAAACACCCAAGGTCTCTCTTGATC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTACTAGAGTCCAGATATaGCACAGGGCTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKATRVQI*HRAASS
Trigger: GCTGCTGGCAGCCCTGTGCCATATCTGGACTCTAGT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGTCTTGTTTCCCAACTaGAACCCAATGCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAVLFPN*NPMHSP
Trigger: GGGGGAGTGCATTGGGTTTCAGTTGGGAAACAAGAC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCAGTCACATATGTTTTaGAGTCAGGGGACACGTGTA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPQSHMF*SQGTRV
Trigger: TACACGTGTCCCCTGACTTCAAAACATATGTGACTG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTCCCGGCCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSRPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGGCCGGGA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAAGGCGGGTAGATCATaGGGTCAAGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTKAGRS*GQEIET
Trigger: GGTCTCGATCTCTTGACCTCATGATCTACCCGCCTT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGTCTTCCTGATCTGGTaGAAGAGTATGCGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTVFLIW*KSMRLV
Trigger: CACCAGCCGCATACTCTTTCACCAGATCAGGAAGAC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTTGCTGATAAACTTCTaGAGTTTCCGGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPLLINF*SFRLTE
Trigger: CTCTGTGAGCCGGAAACTTCAGAAGTTTATCAGCAA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTTTCCTCTCATTTGCTaGTGTCGCATCCCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPFPLIC*CRIPKL
Trigger: AAGCTTTGGGATGCGACATCAGCAAATGAGAGGAAA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTACTTCCATATCCTCTTaGGGGTCCTCCAAATTTAGG +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPTSISS*GSSKFR
Trigger: CCTAAATTTGGAGGACCCTCAAGAGGATATGGAAGT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTACTGGATGGTGCTGTaGTGGCCCGTGTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTYWMVL*WPVWIS
Trigger: AGAAATCCACACGGGCCATCACAGCACCATCCAGTA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTACTGGATGGTGCTGTaGTGGCCCGTGTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAYWMVL*WPVWIS
Trigger: AGAAATCCACACGGGCCATCACAGCACCATCCAGTA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCGGCGCTACTCCGGATaGCGCTGCGGCACCTCAAGT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRRYSG*RCGTSS
Trigger: ACTTGAGGTGCCGCAGCGGCATCCGGAGTAGCGCCG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGAGCTTCTGCTGAATTaGATTCACCAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPELLLN*IHQLLP
Trigger: AGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCGTGTGCAAAGATTCTaGAGTTTCATCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRVQRF*SFIRSP
Trigger: TGGGCTTCTGATGAAACTGCAGAATCTTTGCACACG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCCTGATCCAACCGTGTaGAAAGATTCTGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPPDPTV*KDSAVS
Trigger: TGAAACTGCAGAATCTTTGCACACGGTTGGATCAGG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGCTGTGAACTGGATGTaGCATACAGTTTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPAVNWM*HTVFLC
Trigger: GCACAAGAAAACTGTATGGCACATCCAGTTCACAGC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTATTGTCATCTCCCGTTaGCAGCAGGGTACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTIVISR*QQGTVH
Trigger: GTGGACAGTACCCTGCTGGCAACGGGAGATGACAAT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCGAAGGTTGGCGAGGTaGGCGTCCACCCAACGCAGC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRRLAR*ASTQRS
Trigger: GCTGCGTTGGGTGGACGCCCACCTCGCCAACCTTCG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTGGGACCTCCGAAGGTTaGCGAGGTGGGCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIGTSEG*RGGRPP
Trigger: GGGTGGACGCCCACCTCGCCAACCTTCGGAGGTCCC...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGTCACTTGACCCAGTaGCTAAGAGAAGATGATGAC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSHLTQ*LREDDD
Trigger: GTCATCATCTTCTCTTAGCCACTGGGTCAAGTGACT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGTCACAGTACTGGATaGTGCTGTGATGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSHSTG*CCDGPC
Trigger: ACACGGGCCATCACAGCACCATCCAGTACTGTGACT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCCATTCCATGTATGGTaGCCCATCCTGGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAPFHVW*PILVHL
Trigger: AAGGTGAACCAGGATGGGTCACCATACATGGAATGG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCCTTCTAAAAGGGAATaGTCTCTAACAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPPSKRE*SLTASA
Trigger: TGCAGAAGCTGTTAGAGATCATTCCCTTTTAGAAGG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTGTGTAGAAGGTCTGTaGGGATTCCCCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTCVEGL*GFPSDN
Trigger: GTTGTCACTGGGGAATCCTCACAGACCTTCTACACA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGTCCAACTCAGATACTaGCAACTAGAGTCCAGATAT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPVQLRY*QLESRY
Trigger: ATATCTGGACTCTAGTTGTCAGTATCTGAGTTGGAC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTCTGCCTACATGAGATaGGCCCCTAACAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSAYMR*APNSVY
Trigger: GTACACACTGTTAGGGGCTCATCTCATGTAGGCAGA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTACATACAGTCTTCCTaGTCTGGTGAAAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPYIQSS*SGERVC
Trigger: GCATACTCTTTCACCAGATCAGGAAGACTGTATGTA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCATCCTCATGAGCCTTaGTTTCTAGAAGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPHPHEP*FLEVSL
Trigger: GAGAGAAACTTCTAGAAATCAAGGCTCATGAGGATG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGCACTTCATCCTCATaGGCCTTGATTTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSTSSS*ALISRS
Trigger: ACTTCTAGAAATCAAGGCTCATGAGGATGAAGTGCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTCTTCTCATCGGCTGTaGACTGGATGTGCCATACAG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASSHRL*TGCAIQ
Trigger: CTGTATGGCACATCCAGTTCACAGCCGATGAGAAGA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTCTTCTCATCGGCTGTaGACTGGATGTGCCATACAG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSSHRL*TGCAIQ
Trigger: CTGTATGGCACATCCAGTTCACAGCCGATGAGAAGA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGCGGAGCACACAAATaGAGAAGCTCACCGTTTGAG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSGAHK*RSSPFE
Trigger: CTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGCT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGCAGCTCCTTCTTCTaGAAGCGGAGCACACAAATG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSSSFF*KRSTQM
Trigger: CATTTGTGTGCTCCGCTTTCAGAAGAAGGAGCTGCT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGCAGCTCCTTCTTCTaGAAGCGGAGCACACAAATG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASSSFF*KRSTQM
Trigger: CATTTGTGTGCTCCGCTTTCAGAAGAAGGAGCTGCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTACTCCGGATGCCGCTaGGGCACCTCAAGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVYSGCR*GTSSLR
Trigger: GCGAAGACTTGAGGTGCCGCAGCGGCATCCGGAGTA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGACTTCCCACAGCCTaGCATTCCATGTATGGTGAC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKARLPTA*HSMYGD
Trigger: GTCACCATACATGGAATGGCAGGCTGTGGGAAGTCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGACTTCCCACAGCCTaGCATTCCATGTATGGTGAC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRLPTA*HSMYGD
Trigger: GTCACCATACATGGAATGGCAGGCTGTGGGAAGTCT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGCACAAAGTTCCTTGTaGATCTTGGCACTGGCCATG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTAQSSL*ILALAM
Trigger: CATGGCCAGTGCCAAGATGCACAAGGAACTTTGTGC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTGCCACCATTATCCTTaGACCATCAGCAGACCACGA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTCHHYP*TISRPR
Trigger: TCGTGGTCTGCTGATGGTGCAAGGATAATGGTGGCA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAAAACTCCAGATCTTTaGAGTCTTGTCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPKTPDL*SLVSRG
Trigger: ACCTCTGCTGACAAGACTGCAAAGATCTGGAGTTTT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTCGAAGGTTGGCGAGGTaGGCGTCCACCCAACGCAGC +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFRRLAR*ASTQRS
Trigger: GCTGCGTTGGGTGGACGCCCACCTCGCCAACCTTCG...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAACAACTGGCCTCTGTaGTACTCCACCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKANNWPL*YSTFTQ
Trigger: CTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAACAACTGGCCTCTGTaGTACTCCACCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTNNWPL*YSTFTQ
Trigger: CTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTGTGCATCTTGGCACTaGCCATGTGATAGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTCASWH*PCDRPE
Trigger: TTCTGGCCTATCACATGGCCAGTGCCAAGATGCACA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGTTCCTTGTGCATCTTaGCACTGGCCATGTGATAGG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAVPCAS*HWPCDR
Trigger: CCTATCACATGGCCAGTGCCAAGATGCACAAGGAAC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGCTGCTCTTTGCTGTTaGGTGGGCTCATTTCTTACT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAAALCC*VGSFLT
Trigger: AGTAAGAAATGAGCCCACTCAACAGCAAAGAGCAGC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGCTGCTCTTTGCTGTTaGGTGGGCTCATTTCTTACT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTAALCC*VGSFLT
Trigger: AGTAAGAAATGAGCCCACTCAACAGCAAAGAGCAGC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCCAGCTTCTTCCTTGTaGCAAAAACAACTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTPASSL*QKQLAS
Trigger: AGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTTGGAGAGCTTCTGCTaGATTGCATTCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLESFC*IAFTSF
Trigger: GAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGTCTGAGGCTGCAATaGGGTATGATTATGCCACTG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASLRLQ*GMIMPL
Trigger: CAGTGGCATAATCATACCTCATTGCAGCCTCAGACT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGGCAGGAGGATTGCTTaGACCCAGGAGTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVGRRIA*TQESEA
Trigger: AGCCTCAGACTCCTGGGTTCAAGCAATCCTCCTGCC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCTTCTAGAGTTACAGTaGCTCATCTGGAATTACACA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPLLELQ*LIWNYT
Trigger: TGTGTAATTCCAGATGAGTCACTGTAACTCTAGAAG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTATACTCTGCCTACATaGGATGAGCCCCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAYTLPT*DEPLTV
Trigger: CACTGTTAGGGGCTCATCTCATGTAGGCAGAGTATA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCCTGAAAATTCTCACTaGCTGCACAATCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPPENSH*LHNPFH
Trigger: ATGAAAAGGATTGTGCAGTCAGTGAGAATTTTCAGG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCTCCTGTTTCAGCTTTaGACACCTGTAAGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPLLFQL*TPVRFY
Trigger: ATAAAACCTTACAGGTGTTCAAAGCTGAAACAGGAG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAAGCTTATCATCTGGTaGAAATCTGCAGTGATTGAC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPKLIIW*KSAVID
Trigger: GTCAATCACTGCAGATTTTCACCAGATGATAAGCTT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCCAAATGCAATGTACTaGAGATGTGGACTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPPNAMY*RCGLKQ
Trigger: TTGCTTAAGTCCACATCTTCAGTACATTGCATTTGG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGTCAGCAGAGGTAGATaGAAACTTGGTAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAVSRGR*KLGSIV
Trigger: CACGATGCTACCAAGTTTTCATCTACCTCTGCTGAC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGTCAGCAGAGGTAGATaGAAACTTGGTAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTVSRGR*KLGSIV
Trigger: CACGATGCTACCAAGTTTTCATCTACCTCTGCTGAC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTGGCCCCTCAATTCATaGAGTGGCAAAAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTWPLNS*SGKRRS
Trigger: TGATCTCCTTTTGCCACTTCATGAATTGAGGGGCCA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGACATTCCATATCCTaGTTTCTCCATTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRHSIS*FLHCHL
Trigger: GAGATGACAATGGAGAAATCAGGATATGGAATGTCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTACTCCGGATGCCGCTaGGGCACCTCAAGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNYSGCR*GTSSLR
Trigger: GCGAAGACTTGAGGTGCCGCAGCGGCATCCGGAGTA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTACCGACTGCATGAACTaGCATGAAATTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKATDCMN*HEICSS
Trigger: GGAGCTGCAAATTTCATGGCAGTTCATGCAGTCGGT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGTCATCTGTAGAGAATaGACAACAAAGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPVICRE*TTKHFI
Trigger: GATGAAGTGCTTTGTTGTGCATTCTCTACAGATGAC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAACTTAAATGTCCTCTaGAATCAGCCACCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPNLNVL*NQPPLN
Trigger: GTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGGTGGACCCCACTACTaGACACAAAGGGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVGGPHY*TQREEV
Trigger: GACCTCCTCCCTTTGTGTCCAGTAGTGGGGTCCACC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGAGACTCCAGGCCGGTaGAGGGAAACGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNETPGR*RETATG
Trigger: TCCTGTTGCCGTTTCCCTCCACCGGCCTGGAGTCTC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTTGMPS*RRAARS
Trigger: AGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGCAACCACTGCCAAATaGTTTTGTGGGGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTATTAK*FCGEKS
Trigger: TGACTTCTCCCCACAAAACCATTTGGCAGTGGTTGC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAACTCTACACAGTACTaGGACAAAGCAACCACTGCC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKANSTQY*DKATTA
Trigger: GGCAGTGGTTGCTTTGTCCCAGTACTGTGTAGAGTT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCTGAGCTGTCAACCATaGGCCAAGCCTTTGCGCCTA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLSCQP*AKPLRL
Trigger: TAGGCGCAAAGGCTTGGCTCATGGTTGACAGCTCAG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGAAAAACTCTCATCCTaGTCCAACCGTGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTEKLSS*SNRVQR
Trigger: TCTTTGCACACGGTTGGATCAGGATGAGAGTTTTTC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGGCAGGAGAATTGCTTaGACCCAGGAGGCAGCGATT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVGRRIA*TQEAAI
Trigger: AATCGCTGCCTCCTGGGTTCAAGCAATTCTCCTGCC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGGCAGGAGGATTGCTTaGACCCAGGAGTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNGRRIA*TQESEA
Trigger: AGCCTCAGACTCCTGGGTTCAAGCAATCCTCCTGCC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTATTCTGAAGCTGTTTaGGGTAGTACTCCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTYSEAV*GSTPSD
Trigger: ATCGCTGGGAGTACTACCTCAAACAGCTTCAGAATA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTATTCTGAAGCTGTTTaGGGTAGTACTCCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAYSEAV*GSTPSD
Trigger: ATCGCTGGGAGTACTACCTCAAACAGCTTCAGAATA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTACCTTAACGTCCTTCTaGAGGATGGAAAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKATLTSF*RMERSV
Trigger: CACAGATCTTTCCATCCTTCAGAAGGACGTTAAGGT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTACCTTAACGTCCTTCTaGAGGATGGAAAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTTLTSF*RMERSV
Trigger: CACAGATCTTTCCATCCTTCAGAAGGACGTTAAGGT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTTGCTGATAAACTTCTaGAGTTTCCGGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALLINF*SFRLTE
Trigger: CTCTGTGAGCCGGAAACTTCAGAAGTTTATCAGCAA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCAAGAAGCTATTCTCTaGCCATCCTCAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTQEAIL*PSSEKQ
Trigger: CTGCTTTTCTGAGGATGGTCAGAGAATAGCTTCTTG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTCAAATCCCAAAGTTTaGGGAAGCAGTCACTTGACC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSNPKV*GSSHLT
Trigger: GGTCAAGTGACTGCTTCCTCAAACTTTGGGATTTGA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTCAAATCCCAAAGTTTaGGGAAGCAGTCACTTGACC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASNPKV*GSSHLT
Trigger: GGTCAAGTGACTGCTTCCTCAAACTTTGGGATTTGA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTCTGCAGTGATTGACTaGATTTGTATGACCAAACAT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSAVID*ICMTKH
Trigger: ATGTTTGGTCATACAAATTCAGTCAATCACTGCAGA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTTTCCTCTCATTTGCTaGTGTCGCATCCCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAFPLIC*CRIPKL
Trigger: AAGCTTTGGGATGCGACATCAGCAAATGAGAGGAAA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTACTTCCATATCCTCTTaGGGGTCCTCCAAATTTAGG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTTSISS*GSSKFR
Trigger: CCTAAATTTGGAGGACCCTCAAGAGGATATGGAAGT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCGTGTGCAAAGATTCTaGAGTTTCATCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRVQRF*SFIRSP
Trigger: TGGGCTTCTGATGAAACTGCAGAATCTTTGCACACG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCCTGATCCAACCGTGTaGAAAGATTCTGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAPDPTV*KDSAVS
Trigger: TGAAACTGCAGAATCTTTGCACACGGTTGGATCAGG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCTCCTCTTGACCGACTaGATGAACTGCCATGAAATT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALLLTD*MNCHEI
Trigger: AATTTCATGGCAGTTCATGCAGTCGGTCAAGAGGAG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTCCTCTTGACCGACTaGATGAACTGCCATGAAATT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLLLTD*MNCHEI
Trigger: AATTTCATGGCAGTTCATGCAGTCGGTCAAGAGGAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGCTGTGAACTGGATGTaGCATACAGTTTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTAVNWM*HTVFLC
Trigger: GCACAAGAAAACTGTATGGCACATCCAGTTCACAGC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCAGACTCCCCACCTCTaGTTCTATCCCTTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVQTPHL*FYPFCP
Trigger: CGGGCAAAAGGGATAGAACCAGAGGTGGGGAGTCTG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CCA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCGTCCTTCTGAAGGATaGAAAGATCTGTGTAATAAT +
Preference number: 4 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRPSEG*KDLCNN
Trigger: ATTATTACACAGATCTTTCCATCCTTCAGAAGGACG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGTCACTTGACCCAGTaGCTAAGAGAAGATGATGAC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASHLTQ*LREDDD
Trigger: GTCATCATCTTCTCTTAGCCACTGGGTCAAGTGACT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGTCACTTGACCCAGTaGCTAAGAGAAGATGATGAC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSHLTQ*LREDDD
Trigger: GTCATCATCTTCTCTTAGCCACTGGGTCAAGTGACT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTGCAGACGTCTTATATaGTCAACTGCAAGGACCATC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTCRRLI*STARTI
Trigger: GATGGTCCTTGCAGTTGACCATATAAGACGTCTGCA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTGCAGACGTCTTATATaGTCAACTGCAAGGACCATC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKACRRLI*STARTI
Trigger: GATGGTCCTTGCAGTTGACCATATAAGACGTCTGCA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTCATCGGCTGTGAACTaGATGTGCCATACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASSAVN*MCHTVF
Trigger: GAAAACTGTATGGCACATCCAGTTCACAGCCGATGA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTCATCGGCTGTGAACTaGATGTGCCATACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSSAVN*MCHTVF
Trigger: GAAAACTGTATGGCACATCCAGTTCACAGCCGATGA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGGACTGTCCTTACACTaGAAGAAGAGACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTGLSLH*KKRQQE
Trigger: TTCCTGTTGTCTCTTCTTCCAGTGTAAGGACAGTCC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359972.6
ENST00000550527.5
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGGACTGTCCTTACACTaGAAGAAGAGACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAGLSLH*KKRQQE
Trigger: TTCCTGTTGTCTCTTCTTCCAGTGTAAGGACAGTCC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359972.6
ENST00000550527.5
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTGCCAAATGGTTTTGTaGGGAGAAGTCACAGTACTG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTCQMVL*GEVTVL
Trigger: CAGTACTGTGACTTCTCCCCACAAAACCATTTGGCA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGTCTTGTTTCCCAACTaGAACCCAATGCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVVLFPN*NPMHSP
Trigger: GGGGGAGTGCATTGGGTTTCAGTTGGGAAACAAGAC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTAGGCCACTGCTACCCTaGGGCACAGCCTGCATAACA +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIRPLLP*GTACIT
Trigger: TGTTATGCAGGCTGTGCCTCAGGGTAGCAGTGGCCT...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGTCTTCCTGATCTGGTaGAAGAGTATGCGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVVFLIW*KSMRLV
Trigger: CACCAGCCGCATACTCTTTCACCAGATCAGGAAGAC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTACATACAGTCTTCCTaGTCTGGTGAAAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTYIQSS*SGERVC
Trigger: GCATACTCTTTCACCAGATCAGGAAGACTGTATGTA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCATCCTCATGAGCCTTaGTTTCTAGAAGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAHPHEP*FLEVSL
Trigger: GAGAGAAACTTCTAGAAATCAAGGCTCATGAGGATG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGCACTTCATCCTCATaGGCCTTGATTTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASTSSS*ALISRS
Trigger: ACTTCTAGAAATCAAGGCTCATGAGGATGAAGTGCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTCTTTCACTGTTTCCTaGTGGCCTCGTAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASFTVS*WPRRKI
Trigger: TATCTTTCTACGAGGCCATCAGGAAACAGTGAAAGA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAAGAAGCTCACCGTTTaGGACATTCCATATCCTGAT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTKKLTV*DIPYPD
Trigger: ATCAGGATATGGAATGTCTCAAACGGTGAGCTTCTT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAAGAAGCTCACCGTTTaGGACATTCCATATCCTGAT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAKKLTV*DIPYPD
Trigger: ATCAGGATATGGAATGTCTCAAACGGTGAGCTTCTT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTTTAATCAGCATAGCTaGTCTTTGCTGTTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAFNQHS*SLLLSG
Trigger: CCCACTCAACAGCAAAGAGCAGCTATGCTGATTAAA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTTTAATCAGCATAGCTaGTCTTTGCTGTTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTFNQHS*SLLLSG
Trigger: CCCACTCAACAGCAAAGAGCAGCTATGCTGATTAAA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAAAACTCCAGATCTTTaGAGTCTTGTCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTKTPDL*SLVSRG
Trigger: ACCTCTGCTGACAAGACTGCAAAGATCTGGAGTTTT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGATTGTCATCTCCCGTTaGCAGCAGGGTACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVIVISR*QQGTVH
Trigger: GTGGACAGTACCCTGCTGGCAACGGGAGATGACAAT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTATGGTGACCCATCCTaGTTCACCTTTCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAYGDPS*FTFQFG
Trigger: TCCAAATTGAAAGGTGAACCAGGATGGGTCACCATA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACACTAGAGTCCAGATATaGCACAGGGCTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNTRVQI*HRAASS
Trigger: GCTGCTGGCAGCCCTGTGCCATATCTGGACTCTAGT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTACTGTTGGTGAAATaGCAGCAATTGACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLLLVK*QQLTCS
Trigger: AGAGCAAGTCAATTGCTGCCATTTCACCAACAGTAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCAGAGCCTGATTGTCTaGTCATCAGAAGATGTCAAA +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAQSLIV*SSEDVK
Trigger: TTTGACATCTTCTGATGACCAGACAATCAGGCTCTG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGTCACAGTACTGGATaGTGCTGTGATGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSHSTG*CCDGPC
Trigger: ACACGGGCCATCACAGCACCATCCAGTACTGTGACT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGAGCTTCTCTATGTTaGAGCAAACAATTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKARASLC*SKQFRA
Trigger: AGCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCCATTCCATGTATGGTaGCCCATCCTGGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVPFHVW*PILVHL
Trigger: AAGGTGAACCAGGATGGGTCACCATACATGGAATGG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGTCTTGTTTCCCAACTaGAACCCAATGCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNVLFPN*NPMHSP
Trigger: GGGGGAGTGCATTGGGTTTCAGTTGGGAAACAAGAC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTTTAGGACCCATTACTaGATCTGTAACACTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAFRTHY*ICNTLV
Trigger: GACAAGAGTGTTACAGATTCAGTAATGGGTCCTAAA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTTTAGGACCCATTACTaGATCTGTAACACTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTFRTHY*ICNTLV
Trigger: GACAAGAGTGTTACAGATTCAGTAATGGGTCCTAAA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGTGTAGAAGGTCTGTaGGGATTCCCCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVCVEGL*GFPSDN
Trigger: GTTGTCACTGGGGAATCCTCACAGACCTTCTACACA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCCCGGCCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSRPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGGCCGGGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTCACAAAAAGAACTGCTaGAGGCCAGGCCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIHKKNC*RPGQWL
Trigger: GAGCCACTGGCCTGGCCTTCAGCAGTTCTTTTTGTG...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCCTGAAAATTCTCACTaGCTGCACAATCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAPENSH*LHNPFH
Trigger: ATGAAAAGGATTGTGCAGTCAGTGAGAATTTTCAGG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTCCTGTTTCAGCTTTaGACACCTGTAAGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLLFQL*TPVRFY
Trigger: ATAAAACCTTACAGGTGTTCAAAGCTGAAACAGGAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAAGCTTATCATCTGGTaGAAATCTGCAGTGATTGAC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTKLIIW*KSAVID
Trigger: GTCAATCACTGCAGATTTTCACCAGATGATAAGCTT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGAAAACATCACACCATaGACCCAACTTAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTENITP*TQLKCP
Trigger: AGGACATTTAAGTTGGGTTCATGGTGTGATGTTTTC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGAAAACATCACACCATaGACCCAACTTAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAENITP*TQLKCP
Trigger: AGGACATTTAAGTTGGGTTCATGGTGTGATGTTTTC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCCAAATGCAATGTACTaGAGATGTGGACTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTPNAMY*RCGLKQ
Trigger: TTGCTTAAGTCCACATCTTCAGTACATTGCATTTGG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCTTCTCATCGGCTGTaGACTGGATGTGCCATACAG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSSHRL*TGCAIQ
Trigger: CTGTATGGCACATCCAGTTCACAGCCGATGAGAAGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTGCCAATTCCATACCTaGATTTCAGCATCATCAGAA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTCQFHT*ISASSE
Trigger: TTCTGATGATGCTGAAATTCAGGTATGGAATTGGCA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTGCCAATTCCATACCTaGATTTCAGCATCATCAGAA +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKACQFHT*ISASSE
Trigger: TTCTGATGATGCTGAAATTCAGGTATGGAATTGGCA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGACATTCCATATCCTaGTTTCTCCATTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRHSIS*FLHCHL
Trigger: GAGATGACAATGGAGAAATCAGGATATGGAATGTCT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGACATTCCATATCCTaGTTTCTCCATTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKARHSIS*FLHCHL
Trigger: GAGATGACAATGGAGAAATCAGGATATGGAATGTCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGCGGAGCACACAAATaGAGAAGCTCACCGTTTGAG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSGAHK*RSSPFE
Trigger: CTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGACTTCCCACAGCCTaGCATTCCATGTATGGTGAC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRLPTA*HSMYGD
Trigger: GTCACCATACATGGAATGGCAGGCTGTGGGAAGTCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCCAACTGAAACCCAATaGACTCCCCCTGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVPTETQ*TPPGKQ
Trigger: TTGTTTCCCAGGGGGAGTGCATTGGGTTTCAGTTGG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTCAAAAAGCAGGCCACTaGTACCCTGAGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIQKAGH*YPEAQP
Trigger: AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTG...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAACTGCCATGAAATTTaGAGCTCCATCATACTAGGT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTNCHEI*SSIILG
Trigger: ACCTAGTATGATGGAGCTGCAAATTTCATGGCAGTT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAACTGCCATGAAATTTaGAGCTCCATCATACTAGGT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKANCHEI*SSIILG
Trigger: ACCTAGTATGATGGAGCTGCAAATTTCATGGCAGTT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCCATTATCGACCTCCTaGTTGGCCTGCAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNPLSTS*LACSLA
Trigger: AGCTAAGCTGCAGGCCAAGCAGGAGGTCGATAATGG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGTCATCTGTAGAGAATaGACAACAAAGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAVICRE*TTKHFI
Trigger: GATGAAGTGCTTTGTTGTGCATTCTCTACAGATGAC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGCCACCATTATCCTTaGACCATCAGCAGACCACGA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVCHHYP*TISRPR
Trigger: TCGTGGTCTGCTGATGGTGCAAGGATAATGGTGGCA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAACTTAAATGTCCTCTaGAATCAGCCACCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTNLNVL*NQPPLN
Trigger: GTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTCAGACTCCCCACCTCTaGTTCTATCCCTTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFQTPHL*FYPFCP
Trigger: CGGGCAAAAGGGATAGAACCAGAGGTGGGGAGTCTG...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTGAATCTTTACCACTaGAAGAAGAGACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLNLYH*KKRQQE
Trigger: TTCCTGTTGTCTCTTCTTCCAGTGGTAAAGATTCAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAACAACTGGCCTCTGTaGTACTCCACCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVNNWPL*YSTFTQ
Trigger: CTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGTGCATCTTGGCACTaGCCATGTGATAGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVCASWH*PCDRPE
Trigger: TTCTGGCCTATCACATGGCCAGTGCCAAGATGCACA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTACAATATTAGGAAATaGCTGTCGTCCAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAYNIRK*LSSKKV
Trigger: CACCTTCTTGGACGACAGCCATTTCCTAATATTGTA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTACAATATTAGGAAATaGCTGTCGTCCAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTYNIRK*LSSKKV
Trigger: CACCTTCTTGGACGACAGCCATTTCCTAATATTGTA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGATCTTTCTCTCTCTaGGCTGTCAACCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRSFSL*AVNHEP
Trigger: TGGCTCATGGTTGACAGCTCAGAGAGAGAAAGATCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGCTGCTCTTTGCTGTTaGGTGGGCTCATTTCTTACT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVAALCC*VGSFLT
Trigger: AGTAAGAAATGAGCCCACTCAACAGCAAAGAGCAGC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCCAGCTTCTTCCTTGTaGCAAAAACAACTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVPASSL*QKQLAS
Trigger: AGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTTGGAGAGCTTCTGCTaGATTGCATTCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLESFC*IAFTSF
Trigger: GAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTGTCTTGTTTCCCAACTaGAACCCAATGCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFVLFPN*NPMHSP
Trigger: GGGGGAGTGCATTGGGTTTCAGTTGGGAAACAAGAC...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGTGTAGAAGGTCTGTaGGGATTCCCCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNCVEGL*GFPSDN
Trigger: GTTGTCACTGGGGAATCCTCACAGACCTTCTACACA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGCCAGCAGCTACAGTaGGAAAAGGGTAGACCAATA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVCQQLQ*EKGRPI
Trigger: TATTGGTCTACCCTTTTCTCACTGTAGCTGCTGGCA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCTGCCTACATGAGATaGGCCCCTAACAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSAYMR*APNSVY
Trigger: GTACACACTGTTAGGGGCTCATCTCATGTAGGCAGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGCAATTGACTTGCTCTaGGTGCTCATCATAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVAIDLL*VLIIGV
Trigger: CACACCTATGATGAGCACTCAGAGCAAGTCAATTGC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGCATCATCAGAACTTaGAATAAGAGTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASIIRT*NKSLLI
Trigger: GATGAGAAGACTCTTATTTCAAGTTCTGATGATGCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGGCCCCTCAATTCATaGAGTGGCAAAAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVWPLNS*SGKRRS
Trigger: TGATCTCCTTTTGCCACTTCATGAATTGAGGGGCCA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGCGGAGCACACAAATaGAGAAGCTCACCGTTTGAG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSGAHK*RSSPFE
Trigger: CTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGACCGACTGCATGAACTaGCATGAAATTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVTDCMN*HEICSS
Trigger: GGAGCTGCAAATTTCATGGCAGTTCATGCAGTCGGT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGCCACCATTATCCTTaGACCATCAGCAGACCACGA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNCHHYP*TISRPR
Trigger: TCGTGGTCTGCTGATGGTGCAAGGATAATGGTGGCA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTCTTATATGGTCAACTaGAAGGACCATCACTTCATT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASYMVN*KDHHFI
Trigger: AATGAAGTGATGGTCCTTGCAGTTGACCATATAAGA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTTCCATTAATGAGTTaGAGACGTCTTATATGGTCA +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLPLMS*RRLIWS
Trigger: TGACCATATAAGACGTCTGCAACTCATTAATGGAAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCTTCCATTAATGAGTTaGAGACGTCTTATATGGTCA +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALPLMS*RRLIWS
Trigger: TGACCATATAAGACGTCTGCAACTCATTAATGGAAG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCTCTTTGCTGTTGAGTaGGCTCATTTCTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALFAVE*AHFLLF
Trigger: AAAAAGTAAGAAATGAGCCCACTCAACAGCAAAGAG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVTGMPS*RRAARS
Trigger: AGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGTGACAAAAACAACTaGCCTCTGTGGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVCDKNN*PLWYST
Trigger: GGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTCTTCAATATTAAGTaGAAGCCTCTGGGAAAAACT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLFNIK*KPLGKT
Trigger: AGTTTTTCCCAGAGGCTTCCACTTAATATTGAAGAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCGTCCTTCTGAAGGATaGAAAGATCTGTGTAATAAT +
Preference number: 4 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKARPSEG*KDLCNN
Trigger: ATTATTACACAGATCTTTCCATCCTTCAGAAGGACG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCGTCCTTCTGAAGGATaGAAAGATCTGTGTAATAAT +
Preference number: 4 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRPSEG*KDLCNN
Trigger: ATTATTACACAGATCTTTCCATCCTTCAGAAGGACG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGTTCCTTGTGCATCTTaGCACTGGCCATGTGATAGG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNVPCAS*HWPCDR
Trigger: CCTATCACATGGCCAGTGCCAAGATGCACAAGGAAC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGCAACCACTGCCAAATaGTTTTGTGGGGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVATTAK*FCGEKS
Trigger: TGACTTCTCCCCACAAAACCATTTGGCAGTGGTTGC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAACTCTACACAGTACTaGGACAAAGCAACCACTGCC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVNSTQY*DKATTA
Trigger: GGCAGTGGTTGCTTTGTCCCAGTACTGTGTAGAGTT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTTGGAGAGCTTCTGCTaGATTGCATTCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLESFC*IAFTSF
Trigger: GAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATCCATTCCATGTATGGTaGCCCATCCTGGTTCACCTT +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYPFHVW*PILVHL
Trigger: AAGGTGAACCAGGATGGGTCACCATACATGGAATGG...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTGTGTAGAAGGTCTGTaGGGATTCCCCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCICVEGL*GFPSDN
Trigger: GTTGTCACTGGGGAATCCTCACAGACCTTCTACACA...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTTGGCCCCACCTCAATaGCTAACATTTAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLAPPQ*LTFSSG
Trigger: TCCACTGCTAAATGTTAGTCATTGAGGTGGGGCCAA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTATACTCTGCCTACATaGGATGAGCCCCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNYTLPT*DEPLTV
Trigger: CACTGTTAGGGGCTCATCTCATGTAGGCAGAGTATA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTATTCTGAAGCTGTTTaGGGTAGTACTCCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVYSEAV*GSTPSD
Trigger: ATCGCTGGGAGTACTACCTCAAACAGCTTCAGAATA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCAAGAAGCTATTCTCTaGCCATCCTCAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVQEAIL*PSSEKQ
Trigger: CTGCTTTTCTGAGGATGGTCAGAGAATAGCTTCTTG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCAAATCCCAAAGTTTaGGGAAGCAGTCACTTGACC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSNPKV*GSSHLT
Trigger: GGTCAAGTGACTGCTTCCTCAAACTTTGGGATTTGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTTTCCTCTCATTTGCTaGTGTCGCATCCCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVFPLIC*CRIPKL
Trigger: AAGCTTTGGGATGCGACATCAGCAAATGAGAGGAAA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGACTTCCATATCCTCTTaGGGGTCCTCCAAATTTAGG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVTSISS*GSSKFR
Trigger: CCTAAATTTGGAGGACCCTCAAGAGGATATGGAAGT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGTCAGCAGAGGTAGATaGAAACTTGGTAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNVSRGR*KLGSIV
Trigger: CACGATGCTACCAAGTTTTCATCTACCTCTGCTGAC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGGCCCCTCAATTCATaGAGTGGCAAAAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNWPLNS*SGKRRS
Trigger: TGATCTCCTTTTGCCACTTCATGAATTGAGGGGCCA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGAGCTTCTGCTGAATTaGATTCACCAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVELLLN*IHQLLP
Trigger: AGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTAGACTTCCCACAGCCTaGCATTCCATGTATGGTGAC +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFRLPTA*HSMYGD
Trigger: GTCACCATACATGGAATGGCAGGCTGTGGGAAGTCT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTAGACTTCCCACAGCCTaGCATTCCATGTATGGTGAC +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIRLPTA*HSMYGD
Trigger: GTCACCATACATGGAATGGCAGGCTGTGGGAAGTCT...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATCCAACTGAAACCCAATaGACTCCCCCTGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYPTETQ*TPPGKQ
Trigger: TTGTTTCCCAGGGGGAGTGCATTGGGTTTCAGTTGG...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCGTGTGCAAAGATTCTaGAGTTTCATCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRVQRF*SFIRSP
Trigger: TGGGCTTCTGATGAAACTGCAGAATCTTTGCACACG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACACCGACTGCATGAACTaGCATGAAATTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNTDCMN*HEICSS
Trigger: GGAGCTGCAAATTTCATGGCAGTTCATGCAGTCGGT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGGACAAAGCAACCACTaGCAAATGGTTTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNGQSNH*QMVLWG
Trigger: TCCCCACAAAACCATTTGGCAGTGGTTGCTTTGTCC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNTGMPS*RRAARS
Trigger: AGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATAACAACTGGCCTCTGTaGTACTCCACCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYNNWPL*YSTFTQ
Trigger: CTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTT...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGTGACAAAAACAACTaGCCTCTGTGGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNCDKNN*PLWYST
Trigger: GGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGATCAAGAGAGACCTTaGGTGTTTGCGAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNDQERP*VFAKHQ
Trigger: CTGATGCTTCGCAAACACCCAAGGTCTCTCTTGATC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGCAGACGTCTTATATaGTCAACTGCAAGGACCATC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVCRRLI*STARTI
Trigger: GATGGTCCTTGCAGTTGACCATATAAGACGTCTGCA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCATCGGCTGTGAACTaGATGTGCCATACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSSAVN*MCHTVF
Trigger: GAAAACTGTATGGCACATCCAGTTCACAGCCGATGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATGCTGCTCTTTGCTGTTaGGTGGGCTCATTTCTTACT +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYAALCC*VGSFLT
Trigger: AGTAAGAAATGAGCCCACTCAACAGCAAAGAGCAGC...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATCCAGCTTCTTCCTTGTaGCAAAAACAACTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYPASSL*QKQLAS
Trigger: AGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGG...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTTTGGAGAGCTTCTGCTaGATTGCATTCACCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFLESFC*IAFTSF
Trigger: GAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAA...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCCTTCTAAAAGGGAATaGTCTCTAACAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVPSKRE*SLTASA
Trigger: TGCAGAAGCTGTTAGAGATCATTCCCTTTTAGAAGG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGAAAAACTCTCATCCTaGTCCAACCGTGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNEKLSS*SNRVQR
Trigger: TCTTTGCACACGGTTGGATCAGGATGAGAGTTTTTC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCAGTCACATATGTTTTaGAGTCAGGGGACACGTGTA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNQSHMF*SQGTRV
Trigger: TACACGTGTCCCCTGACTTCAAAACATATGTGACTG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACACCTTAACGTCCTTCTaGAGGATGGAAAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNTLTSF*RMERSV
Trigger: CACAGATCTTTCCATCCTTCAGAAGGACGTTAAGGT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTTGCTGATAAACTTCTaGAGTTTCCGGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLLINF*SFRLTE
Trigger: CTCTGTGAGCCGGAAACTTCAGAAGTTTATCAGCAA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCAAGAAGCTATTCTCTaGCCATCCTCAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNQEAIL*PSSEKQ
Trigger: CTGCTTTTCTGAGGATGGTCAGAGAATAGCTTCTTG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCATCCTCATGAGCCTTaGTTTCTAGAAGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVHPHEP*FLEVSL
Trigger: GAGAGAAACTTCTAGAAATCAAGGCTCATGAGGATG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGCACTTCATCCTCATaGGCCTTGATTTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSTSSS*ALISRS
Trigger: ACTTCTAGAAATCAAGGCTCATGAGGATGAAGTGCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCAAATCCCAAAGTTTaGGGAAGCAGTCACTTGACC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSNPKV*GSSHLT
Trigger: GGTCAAGTGACTGCTTCCTCAAACTTTGGGATTTGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACACTTCCATATCCTCTTaGGGGTCCTCCAAATTTAGG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNTSISS*GSSKFR
Trigger: CCTAAATTTGGAGGACCCTCAAGAGGATATGGAAGT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCTTTCACTGTTTCCTaGTGGCCTCGTAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSFTVS*WPRRKI
Trigger: TATCTTTCTACGAGGCCATCAGGAAACAGTGAAAGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTTTAATCAGCATAGCTaGTCTTTGCTGTTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVFNQHS*SLLLSG
Trigger: CCCACTCAACAGCAAAGAGCAGCTATGCTGATTAAA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCCTGATCCAACCGTGTaGAAAGATTCTGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNPDPTV*KDSAVS
Trigger: TGAAACTGCAGAATCTTTGCACACGGTTGGATCAGG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCTCCTCTTGACCGACTaGATGAACTGCCATGAAATT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLLLTD*MNCHEI
Trigger: AATTTCATGGCAGTTCATGCAGTCGGTCAAGAGGAG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGCTGTGAACTGGATGTaGCATACAGTTTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNAVNWM*HTVFLC
Trigger: GCACAAGAAAACTGTATGGCACATCCAGTTCACAGC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAAAACTCCAGATCTTTaGAGTCTTGTCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVKTPDL*SLVSRG
Trigger: ACCTCTGCTGACAAGACTGCAAAGATCTGGAGTTTT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYTGMPS*RRAARS
Trigger: AGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGT...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFTGMPS*RRAARS
Trigger: AGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTGTGACAAAAACAACTaGCCTCTGTGGTACTCCACC +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYCDKNN*PLWYST
Trigger: GGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACA...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTATGGTGACCCATCCTaGTTCACCTTTCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVYGDPS*FTFQFG
Trigger: TCCAAATTGAAAGGTGAACCAGGATGGGTCACCATA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTGATCAAGAGAGACCTTaGGTGTTTGCGAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFDQERP*VFAKHQ
Trigger: CTGATGCTTCGCAAACACCCAAGGTCTCTCTTGATC...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATGATCAAGAGAGACCTTaGGTGTTTGCGAAGCATCAG +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYDQERP*VFAKHQ
Trigger: CTGATGCTTCGCAAACACCCAAGGTCTCTCTTGATC...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGTACTCCCAGCGATTaGGAAAATCACGTAAAAGTG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSTPSD*ENHVKV
Trigger: CACTTTTACGTGATTTTCCCAATCGCTGGGAGTACT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCTACTGTTGGTGAAATaGCAGCAATTGACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLLLVK*QQLTCS
Trigger: AGAGCAAGTCAATTGCTGCCATTTCACCAACAGTAG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGTCACTTGACCCAGTaGCTAAGAGAAGATGATGAC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSHLTQ*LREDDD
Trigger: GTCATCATCTTCTCTTAGCCACTGGGTCAAGTGACT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCAGAGCCTGATTGTCTaGTCATCAGAAGATGTCAAA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVQSLIV*SSEDVK
Trigger: TTTGACATCTTCTGATGACCAGACAATCAGGCTCTG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGCAGACGTCTTATATaGTCAACTGCAAGGACCATC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNCRRLI*STARTI
Trigger: GATGGTCCTTGCAGTTGACCATATAAGACGTCTGCA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCATCGGCTGTGAACTaGATGTGCCATACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSSAVN*MCHTVF
Trigger: GAAAACTGTATGGCACATCCAGTTCACAGCCGATGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGCCAAATGGTTTTGTaGGGAGAAGTCACAGTACTG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNCQMVL*GEVTVL
Trigger: CAGTACTGTGACTTCTCCCCACAAAACCATTTGGCA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGAGCTTCTCTATGTTaGAGCAAACAATTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRASLC*SKQFRA
Trigger: AGCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTGAAAAACTCTCATCCTaGTCCAACCGTGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIEKLSS*SNRVQR
Trigger: TCTTTGCACACGGTTGGATCAGGATGAGAGTTTTTC...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATCAGTCACATATGTTTTaGAGTCAGGGGACACGTGTA +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYQSHMF*SQGTRV
Trigger: TACACGTGTCCCCTGACTTCAAAACATATGTGACTG...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTCAGTCACATATGTTTTaGAGTCAGGGGACACGTGTA +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIQSHMF*SQGTRV
Trigger: TACACGTGTCCCCTGACTTCAAAACATATGTGACTG...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGTCCAACTCAGATACTaGCAACTAGAGTCCAGATAT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNVQLRY*QLESRY
Trigger: ATATCTGGACTCTAGTTGTCAGTATCTGAGTTGGAC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCTTCTAGAGTTACAGTaGCTCATCTGGAATTACACA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLLELQ*LIWNYT
Trigger: TGTGTAATTCCAGATGAGTCACTGTAACTCTAGAAG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTACATACAGTCTTCCTaGTCTGGTGAAAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNYIQSS*SGERVC
Trigger: GCATACTCTTTCACCAGATCAGGAAGACTGTATGTA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCCTGAAAATTCTCACTaGCTGCACAATCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVPENSH*LHNPFH
Trigger: ATGAAAAGGATTGTGCAGTCAGTGAGAATTTTCAGG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCATCCTCATGAGCCTTaGTTTCTAGAAGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNHPHEP*FLEVSL
Trigger: GAGAGAAACTTCTAGAAATCAAGGCTCATGAGGATG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGAAAACATCACACCATaGACCCAACTTAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVENITP*TQLKCP
Trigger: AGGACATTTAAGTTGGGTTCATGGTGTGATGTTTTC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGCCAATTCCATACCTaGATTTCAGCATCATCAGAA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVCQFHT*ISASSE
Trigger: TTCTGATGATGCTGAAATTCAGGTATGGAATTGGCA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCTTTCACTGTTTCCTaGTGGCCTCGTAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSFTVS*WPRRKI
Trigger: TATCTTTCTACGAGGCCATCAGGAAACAGTGAAAGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAACTTGGTAGCATCGTaGGAAATGTCACAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVNLVAS*EMSQES
Trigger: ACTTTCTTGTGACATTTCTCACGATGCTACCAAGTT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGACATTCCATATCCTaGTTTCTCCATTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRHSIS*FLHCHL
Trigger: GAGATGACAATGGAGAAATCAGGATATGGAATGTCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAAGAAGCTCACCGTTTaGGACATTCCATATCCTGAT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNKKLTV*DIPYPD
Trigger: ATCAGGATATGGAATGTCTCAAACGGTGAGCTTCTT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTAGATCTTTCTCTCTCTaGGCTGTCAACCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFRSFSL*AVNHEL
Trigger: TAGCTCATGGTTGACAGCTCAGAGAGAGAAAGATCT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552268.5
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTTTAATCAGCATAGCTaGTCTTTGCTGTTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNFNQHS*SLLLSG
Trigger: CCCACTCAACAGCAAAGAGCAGCTATGCTGATTAAA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATGAGCTTCTGCTGAATTaGATTCACCAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYELLLN*IHQLLP
Trigger: AGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTC...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTGAGCTTCTGCTGAATTaGATTCACCAGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFELLLN*IHQLLP
Trigger: AGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTC...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTCGTGTGCAAAGATTCTaGAGTTTCATCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIRVQRF*SFIRSP
Trigger: TGGGCTTCTGATGAAACTGCAGAATCTTTGCACACG...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTCCTGATCCAACCGTGTaGAAAGATTCTGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFPDPTV*KDSAVS
Trigger: TGAAACTGCAGAATCTTTGCACACGGTTGGATCAGG...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTCCTGATCCAACCGTGTaGAAAGATTCTGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIPDPTV*KDSAVS
Trigger: TGAAACTGCAGAATCTTTGCACACGGTTGGATCAGG...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGTCATCTGTAGAGAATaGACAACAAAGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVVICRE*TTKHFI
Trigger: GATGAAGTGCTTTGTTGTGCATTCTCTACAGATGAC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCTGAATCTTTACCACTaGAAGAAGAGACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLNLYH*KKRQQE
Trigger: TTCCTGTTGTCTCTTCTTCCAGTGGTAAAGATTCAG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTATGGTGACCCATCCTaGTTCACCTTTCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNYGDPS*FTFQFG
Trigger: TCCAAATTGAAAGGTGAACCAGGATGGGTCACCATA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGTACTCCCAGCGATTaGGAAAATCACGTAAAAGTG +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSTPSD*ENHVKV
Trigger: CACTTTTACGTGATTTTCCCAATCGCTGGGAGTACT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTACAATATTAGGAAATaGCTGTCGTCCAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVYNIRK*LSSKKV
Trigger: CACCTTCTTGGACGACAGCCATTTCCTAATATTGTA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCAGAGCCTGATTGTCTaGTCATCAGAAGATGTCAAA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNQSLIV*SSEDVK
Trigger: TTTGACATCTTCTGATGACCAGACAATCAGGCTCTG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCTTGTGCTGAAACCTaGACTGGAAGATTCTATTGT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSCAET*TGRFYC
Trigger: ACAATAGAATCTTCCAGTCCAGGTTTCAGCACAAGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGAGCTTCTCTATGTTaGAGCAAACAATTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRASLC*SKQFRA
Trigger: AGCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTCCTTCTAAAAGGGAATaGTCTCTAACAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIPSKRE*SLTASA
Trigger: TGCAGAAGCTGTTAGAGATCATTCCCTTTTAGAAGG...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTCCTTCTAAAAGGGAATaGTCTCTAACAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFPSKRE*SLTASA
Trigger: TGCAGAAGCTGTTAGAGATCATTCCCTTTTAGAAGG...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTGTCCAACTCAGATACTaGCAACTAGAGTCCAGATAT +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIVQLRY*QLESRY
Trigger: ATATCTGGACTCTAGTTGTCAGTATCTGAGTTGGAC...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCTTCTAGAGTTACAGTaGCTCATCTGGAATTACACA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLLELQ*LIWNYT
Trigger: TGTGTAATTCCAGATGAGTCACTGTAACTCTAGAAG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCCTGAAAATTCTCACTaGCTGCACAATCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNPENSH*LHNPFH
Trigger: ATGAAAAGGATTGTGCAGTCAGTGAGAATTTTCAGG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCTGCAGTGATTGACTaGATTTGTATGACCAAACAT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSAVID*ICMTKH
Trigger: ATGTTTGGTCATACAAATTCAGTCAATCACTGCAGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAAGCTTATCATCTGGTaGAAATCTGCAGTGATTGAC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNKLIIW*KSAVID
Trigger: GTCAATCACTGCAGATTTTCACCAGATGATAAGCTT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGAAAACATCACACCATaGACCCAACTTAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNENITP*TQLKCP
Trigger: AGGACATTTAAGTTGGGTTCATGGTGTGATGTTTTC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGCATCATCAGAACTTaGAATAAGAGTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSIIRT*NKSLLI
Trigger: GATGAGAAGACTCTTATTTCAAGTTCTGATGATGCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAACTTGGTAGCATCGTaGGAAATGTCACAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNNLVAS*EMSQES
Trigger: ACTTTCTTGTGACATTTCTCACGATGCTACCAAGTT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTAATCAGCATAGCTaGTCTTTGCTGTTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYFNQHS*SLLLSG
Trigger: CCCACTCAACAGCAAAGAGCAGCTATGCTGATTAAA...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAACTTAAATGTCCTCTaGAATCAGCCACCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNNLNVL*NQPPLN
Trigger: GTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCTTATATGGTCAACTaGAAGGACCATCACTTCATT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSYMVN*KDHHFI
Trigger: AATGAAGTGATGGTCCTTGCAGTTGACCATATAAGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCTTCCATTAATGAGTTaGAGACGTCTTATATGGTCA +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLPLMS*RRLIWS
Trigger: TGACCATATAAGACGTCTGCAACTCATTAATGGAAG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCTCTTTGCTGTTGAGTaGGCTCATTTCTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLFAVE*AHFLLF
Trigger: AAAAAGTAAGAAATGAGCCCACTCAACAGCAAAGAG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCTGAATCTTTACCACTaGAAGAAGAGACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLNLYH*KKRQQE
Trigger: TTCCTGTTGTCTCTTCTTCCAGTGGTAAAGATTCAG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTTATGGTGACCCATCCTaGTTCACCTTTCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFYGDPS*FTFQFG
Trigger: TCCAAATTGAAAGGTGAACCAGGATGGGTCACCATA...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTAGAACAAAACCCCCTTaGGGTAAGTGTGGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIRTKPP*GKCGSK
Trigger: TTTTGAACCACACTTACCCCAAGGGGGTTTTGTTCT...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCTTGTGCTGAAACCTaGACTGGAAGATTCTATTGT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSCAET*TGRFYC
Trigger: ACAATAGAATCTTCCAGTCCAGGTTTCAGCACAAGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTAGAGCTTCTCTATGTTaGAGCAAACAATTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIRASLC*SKQFRA
Trigger: AGCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCT...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTAGGACCCATTACTaGATCTGTAACACTCTTGTC +
Preference number: 4 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYFRTHY*ICNTLV
Trigger: GACAAGAGTGTTACAGATTCAGTAATGGGTCCTAAA...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTTTTAGGACCCATTACTaGATCTGTAACACTCTTGTC +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFFRTHY*ICNTLV
Trigger: GACAAGAGTGTTACAGATTCAGTAATGGGTCCTAAA...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCTGCAGTGATTGACTaGATTTGTATGACCAAACAT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSAVID*ICMTKH
Trigger: ATGTTTGGTCATACAAATTCAGTCAATCACTGCAGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR TCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGCATCATCAGAACTTaGAATAAGAGTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSIIRT*NKSLLI
Trigger: GATGAGAAGACTCTTATTTCAAGTTCTGATGATGCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR GCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCTTATATGGTCAACTaGAAGGACCATCACTTCATT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSYMVN*KDHHFI
Trigger: AATGAAGTGATGGTCCTTGCAGTTGACCATATAAGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCTCTTTGCTGTTGAGTaGGCTCATTTCTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLFAVE*AHFLLF
Trigger: AAAAAGTAAGAAATGAGCCCACTCAACAGCAAAGAG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTCTGAATCTTTACCACTaGAAGAAGAGACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFLNLYH*KKRQQE
Trigger: TTCCTGTTGTCTCTTCTTCCAGTGGTAAAGATTCAG...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCTCTTCAATATTAAGTaGAAGCCTCTGGGAAAAACT +
Preference number: 4 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLFNIK*KPLGKT
Trigger: AGTTTTTCCCAGAGGCTTCCACTTAATATTGAAGAG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CCA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTCTCTTTGCTGTTGAGTaGGCTCATTTCTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCILFAVE*AHFLLF
Trigger: AAAAAGTAAGAAATGAGCCCACTCAACAGCAAAGAG...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CCA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTCTCTTCAATATTAAGTaGAAGCCTCTGGGAAAAACT +
Preference number: 4 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFLFNIK*KPLGKT
Trigger: AGTTTTTCCCAGAGGCTTCCACTTAATATTGAAGAG...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS GCA 90 bp GGAGGAGGTCTTCCCGGCCTGTGGCGCCCTTCCCCCGACGGCGGCTaGACCCCGGAGGGAGCCCGGCGCTACTCCGGATGCCGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GGGLPGLWRPSPDGG*TPEGARRYSGCRCG
Trigger: GCCGCAGCGGCATCCGGAGTAGCGCCGGGCTCCCTCCGGGGTGCAGCCGCCGTCGGGGGAAGGGCGCCACAGGCCGGGAAGACCTCCTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS GCA 90 bp CCCGACGGCGGCTGCACCCCGGAGGGAGCCCGGCGCTACTCCGGATaGCGCTGCGGCACCTCAAGTCTTCGCGGGTCGCCGACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: PDGGCTPEGARRYSG*RCGTSSLRGSPTAQ
Trigger: CTGGGCAGTCGGCGACCCGCGAAGACTTGAGGTGCCGCAGCGGCATCCGGAGTAGCGCCGGGCTCCCTCCGGGGTGCAGCCGCCGTCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS GCA 90 bp GGCGGCTGCACCCCGGAGGGAGCCCGGCGCTACTCCGGATGCCGCTaGGGCACCTCAAGTCTTCGCGGGTCGCCGACTGCCCAGACTCCC +
Preference number: 5 (lower is better)
Translates to: GGCTPEGARRYSGCR*GTSSLRGSPTAQTP
Trigger: GGGAGTCTGGGCAGTCGGCGACCCGCGAAGACTTGAGGTGCCGCAGCGGCATCCGGAGTAGCGCCGGGCTCCCTCCGGGGTGCAGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS GCA 90 bp CTCCGGATGCCGCTGCGGCACCTCAAGTCTTCGCGGGTCGCCGACTaGCCAGACTCCCCACCTCTGGTTCTATCCCTTTTGCCCGGGATA +
Preference number: 5 (lower is better)
Translates to: LRMPLRHLKSSRVAD*PDSPPLVLSLLPGI
Trigger: TATCCCGGGCAAAAGGGATAGAACCAGAGGTGGGGAGTCTGGGCAGTCGGCGACCCGCGAAGACTTGAGGTGCCGCAGCGGCATCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS CCA 90 bp GGGAGGGCGGCACTGCCGGGACAAGACTGGGAGACTCCAGGCCGGTaGAGGGAAACGGCAACAGGAGTTTTCCACCGGGAATTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: GRAALPGQDWETPGR*RETATGVFHRELGV
Trigger: CACCCCTAATTCCCGGTGGAAAACTCCTGTTGCCGTTTCCCTCCACCGGCCTGGAGTCTCCCAGTCTTGTCCCGGCAGTGCCGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547743.1
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTTATCGACCTCCTGCTaGGCCTGCAGCTTAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPLSTSC*ACSLAC
Trigger: GCAAGCTAAGCTGCAGGCCAAGCAGGAGGTCGATAA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGAGACCTTGGGTGTTaGCGAAGCATCAGAATGCGG +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRDLGC*RSIRMR
Trigger: CCGCATTCTGATGCTTCGCAAACACCCAAGGTCTCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTATCCTGATTTCTCCATaGTCATCTCCCGTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPILISP*SSPVAS
Trigger: GCTGGCAACGGGAGATGACAATGGAGAAATCAGGAT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS CCA 90 bp CTCTACACAGTACTGGGACAAAGCAACCACTGCCAAATGGTTTTGTaGGGAGAAGTCACAGTACTGGATGGTGCTGTGATGGCCCGTGTG +
Preference number: 5 (lower is better)
Translates to: LYTVLGQSNHCQMVL*GEVTVLDGAVMARV
Trigger: CACACGGGCCATCACAGCACCATCCAGTACTGTGACTTCTCCCCACAAAACCATTTGGCAGTGGTTGCTTTGTCCCAGTACTGTGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGGGACCTCCGAAGGTaGGCGAGGTGGGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRDLRR*ARWAST
Trigger: GGTGGACGCCCACCTCGCCAACCTTCGGAGGTCCCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGCTGCTCTTTGCTGTaGAGTGGGCTCATTTCTTAC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSCSLL*SGLISY
Trigger: GTAAGAAATGAGCCCACTCAACAGCAAAGAGCAGCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGAGCTTCTGCTGAATaGCATTCACCAGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRASAE*HSPASS
Trigger: GGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAGATCAAGAGAGACCTaGGGTGTTTGCGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPRSRET*GVCEAS
Trigger: TGATGCTTCGCAAACACCCAAGGTCTCTCTTGATCT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTAACAAAATCCTCCTCTaGACCGACTGCATGAACTGC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPNKILL*TDCMNC
Trigger: GCAGTTCATGCAGTCGGTCAAGAGGAGGATTTTGTT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTTATCGACCTCCTGCTaGGCCTGCAGCTTAGCTTGC +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLSTSC*ACSLAC
Trigger: GCAAGCTAAGCTGCAGGCCAAGCAGGAGGTCGATAA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTTATCGACCTCCTGCTaGGCCTGCAGCTTAGCTTGC +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALSTSC*ACSLAC
Trigger: GCAAGCTAAGCTGCAGGCCAAGCAGGAGGTCGATAA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCTGCCACCATTATCCTaGCACCATCAGCAGACCACG +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKALPPLS*HHQQTT
Trigger: CGTGGTCTGCTGATGGTGCAAGGATAATGGTGGCAG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTGCAATCAGCCACCTTaGAACGTGAGTCTGTATTCC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPCNQPP*NVSLYS
Trigger: GGAATACAGACTCACGTTCAAAGGTGGCTGATTGCA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTCAAAACTCCAGATCTTaGCAGTCTTGTCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPQNSRS*QSCQQR
Trigger: CCTCTGCTGACAAGACTGCAAAGATCTGGAGTTTTG...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCTGGTTCTATCCCTTTaGCCCGGGATAGAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTLVLSL*PGIEQS
Trigger: TGACTGCTCTATCCCGGGCAAAAGGGATAGAACCAG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTAGGGACCTCCGAAGGTaGGCGAGGTGGGCGTCCACC +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFRDLRR*ARWAST
Trigger: GGTGGACGCCCACCTCGCCAACCTTCGGAGGTCCCT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGAGACCTTGGGTGTTaGCGAAGCATCAGAATGCGG +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRDLGC*RSIRMR
Trigger: CCGCATTCTGATGCTTCGCAAACACCCAAGGTCTCT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTGCTTTTCCTCTCATTaGCTGATGTCGCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPCFSSH*LMSHPK
Trigger: TTTGGGATGCGACATCAGCAAATGAGAGGAAAAGCA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCAGCATAGCTGCTCTTaGCTGTTGAGTGGGCTCATT +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTQHSCS*LLSGLI
Trigger: AATGAGCCCACTCAACAGCAAAGAGCAGCTATGCTG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTATCAGAAGCCCAGATTaGTCTTGTTTCCCAACTGAA +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPIRSPD*SCFPTE
Trigger: TTCAGTTGGGAAACAAGACAAATCTGGGCTTCTGAT...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTGGAAAGGAAAATAGGTaGGCTGGAAGGTTAATCTTC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPGKENR*AGRLIF
Trigger: GAAGATTAACCTTCCAGCCAACCTATTTTCCTTTCC...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAAAGCACAAAGTTCCTaGTGCATCTTGGCACTGGCC +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAKAQSS*CILALA
Trigger: GGCCAGTGCCAAGATGCACAAGGAACTTTGTGCTTT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTTCAAATCCCAAAGTTaGAGGAAGCAGTCACTTGAC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPFKSQS*RKQSLD
Trigger: GTCAAGTGACTGCTTCCTCAAACTTTGGGATTTGAA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTATCCTGATTTCTCCATaGTCATCTCCCGTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAILISP*SSPVAS
Trigger: GCTGGCAACGGGAGATGACAATGGAGAAATCAGGAT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTATCCTGATTTCTCCATaGTCATCTCCCGTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTILISP*SSPVAS
Trigger: GCTGGCAACGGGAGATGACAATGGAGAAATCAGGAT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp CTGCAGCTAATACAGACTTCCCACAGCCTGCCATTCCATGTATGGTaGCCCATCCTGGTTCACCTTTCAATTTGGAGAGCTTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: LQLIQTSHSLPFHVW*PILVHLSIWRASAE
Trigger: TTCAGCAGAAGCTCTCCAAATTGAAAGGTGAACCAGGATGGGTCACCATACATGGAATGGCAGGCTGTGGGAAGTCTGTATTAGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTAGCTGCTCTTTGCTGTaGAGTGGGCTCATTTCTTAC +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKASCSLL*SGLISY
Trigger: GTAAGAAATGAGCCCACTCAACAGCAAAGAGCAGCT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTAGATCAAGAGAGACCTaGGGTGTTTGCGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRSRET*GVCEAS
Trigger: TGATGCTTCGCAAACACCCAAGGTCTCTCTTGATCT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTCTCCTGTTTCAGCTTaGAACACCTGTAAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSPVSA*NTCKVL
Trigger: TAAAACCTTACAGGTGTTCAAAGCTGAAACAGGAGA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGTGAAATGGCAGCAATaGACTTGCTCTGAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTVKWQQ*TCSECS
Trigger: TGAGCACTCAGAGCAAGTCAATTGCTGCCATTTCAC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGTGAAATGGCAGCAATaGACTTGCTCTGAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAVKWQQ*TCSECS
Trigger: TGAGCACTCAGAGCAAGTCAATTGCTGCCATTTCAC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CTTGGGGTAAGTGTGGTTCAAAAAGCAGGCCACTGCTACCCTGAGGCACAGCCTTCTTCCATTAATGAGTaGCAGACGTCTTATATGGTC +
Preference number: 5 (lower is better)
Translates to: LGVSVVQKAGHCYPEAQPSSINE*QTSYMV
Trigger: GACCATATAAGACGTCTGCAACTCATTAATGGAAGA...AGGCTGTGCCTCAGGGTAGCAGTGGCCTGCTTTTTGAACCACACTTACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCAAAACTCCAGATCTTaGCAGTCTTGTCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAQNSRS*QSCQQR
Trigger: CCTCTGCTGACAAGACTGCAAAGATCTGGAGTTTTG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp CCTCCATGGGTAGCAGCTCCTTCTTCTGAAAGCGGAGCACACAAATaGAGAAGCTCACCGTTTGAGACATTCCATATCCTGATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PPWVAAPSSESGAHK*RSSPFETFHILISP
Trigger: TGGAGAAATCAGGATATGGAATGTCTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGCTTTCAGAAGAAGGAGCTGCTACCCATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp CCTCCATGGGTAGCAGCTCCTTCTTCTGAAAGCGGAGCACACAAATaGAGAAGCTCACCGTTTGAGACATTCCATATCTTTGCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: PPWVAAPSSESGAHK*RSSPFETFHIFAVL
Trigger: CAAGACTGCAAAGATATGGAATGTCTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGCTTTCAGAAGAAGGAGCTGCTACCCATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549007.1
CDS GCA 90 bp GTCTGTATTCCACAACTCTACACAGTACTGGGACAAAGCAACCACTaGCAAATGGTTTTGTGGGGAGAAGTCACAGTACTGGATGGTGCT +
Preference number: 5 (lower is better)
Translates to: VCIPQLYTVLGQSNH*QMVLWGEVTVLDGA
Trigger: AGCACCATCCAGTACTGTGACTTCTCCCCACAAAACCATTTGGCAGTGGTTGCTTTGTCCCAGTACTGTGTAGAGTTGTGGAATACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS CCA 90 bp TACAGACTTCCCACAGCCTGCCATTCCATGTATGGTGACCCATCCTaGTTCACCTTTCAATTTGGAGAGCTTCTGCTGAATTGCATTCAC +
Preference number: 5 (lower is better)
Translates to: YRLPTACHSMYGDPS*FTFQFGELLLNCIH
Trigger: GTGAATGCAATTCAGCAGAAGCTCTCCAAATTGAAAGGTGAACCAGGATGGGTCACCATACATGGAATGGCAGGCTGTGGGAAGTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS CCA 90 bp TGCATTCACCAGCTTCTTCCTTGTGACAAAAACAACTGGCCTCTGTaGTACTCCACCTTCACACAGGACTGTCCTTACACTGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: CIHQLLPCDKNNWPL*YSTFTQDCPYTGRR
Trigger: TCTTCTTCCAGTGTAAGGACAGTCCTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGGTGAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359972.6
ENST00000550527.5
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTACAGTCACATATGTTTaGAAGTCAGGGGACACGTGT +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKATVTYV*KSGDTC
Trigger: ACACGTGTCCCCTGACTTCAAAACATATGTGACTGT...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTACAGTCACATATGTTTaGAAGTCAGGGGACACGTGT +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTTVTYV*KSGDTC
Trigger: ACACGTGTCCCCTGACTTCAAAACATATGTGACTGT...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTGCTTTTCCTCTCATTaGCTGATGTCGCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKACFSSH*LMSHPK
Trigger: TTTGGGATGCGACATCAGCAAATGAGAGGAAAAGCA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCTGCCACCATTATCCTaGCACCATCAGCAGACCACG +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVLPPLS*HHQQTT
Trigger: CGTGGTCTGCTGATGGTGCAAGGATAATGGTGGCAG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGCAACAGCAGCTAACTaGAGCTTCAGTCAGATAATC +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAATAAN*SFSQII
Trigger: GATTATCTGACTGAAGCTCAAGTTAGCTGCTGTTGC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGCAACAGCAGCTAACTaGAGCTTCAGTCAGATAATC +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTATAAN*SFSQII
Trigger: GATTATCTGACTGAAGCTCAAGTTAGCTGCTGTTGC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCAGATCTTTGCAGTCTaGTCAGCAGAGGTAGATGAA +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTQIFAV*SAEVDE
Trigger: TTCATCTACCTCTGCTGACAAGACTGCAAAGATCTG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCAGATCTTTGCAGTCTaGTCAGCAGAGGTAGATGAA +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAQIFAV*SAEVDE
Trigger: TTCATCTACCTCTGCTGACAAGACTGCAAAGATCTG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp ATTTGGAGAGCTTCTGCTGAATTGCATTCACCAGCTTCTTCCTTGTaGCAAAAACAACTGGCCTCTGTGGTACTCCACCTTCACACAGGA +
Preference number: 5 (lower is better)
Translates to: IWRASAELHSPASSL*QKQLASVVLHLHTG
Trigger: TCCTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 90 bp ATCGACCTCCTGCTTGGCCTGCAGCTTAGCTTGCTGATAAACTTCTaGAGTTTCCGGCTCACAGAGACCCAGTTGTACAATATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: IDLLLGLQLSLLINF*SFRLTETQLYNIRK
Trigger: TTTCCTAATATTGTACAACTGGGTCTCTGTGAGCCGGAAACTTCAGAAGTTTATCAGCAAGCTAAGCTGCAGGCCAAGCAGGAGGTCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000555047.1
CDS GCA 90 bp GACCCATCCTGGTTCACCTTTCAATTTGGAGAGCTTCTGCTGAATTaGATTCACCAGCTTCTTCCTTGTGACAAAAACAACTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: DPSWFTFQFGELLLN*IHQLLPCDKNNWPL
Trigger: CAGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAAATTGAAAGGTGAACCAGGATGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCAGAGCTTCTCTATGTaGAAGCAAACAATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTQSFSM*KQTISS
Trigger: GCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCTG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTTCAAATCCCAAAGTTaGAGGAAGCAGTCACTTGAC +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTFKSQS*RKQSLD
Trigger: GTCAAGTGACTGCTTCCTCAAACTTTGGGATTTGAA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTTTCAAATCCCAAAGTTaGAGGAAGCAGTCACTTGAC +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAFKSQS*RKQSLD
Trigger: GTCAAGTGACTGCTTCCTCAAACTTTGGGATTTGAA...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGCAGAGATAAGCATTTaGCCATCTGGAGAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTAEISI*PSGEKQ
Trigger: TTGCTTTTCTCCAGATGGCAAAATGCTTATCTCTGC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp ATGGTGACCCATCCTGGTTCACCTTTCAATTTGGAGAGCTTCTGCTaGATTGCATTCACCAGCTTCTTCCTTGTGACAAAAACAACTGGC +
Preference number: 5 (lower is better)
Translates to: MVTHPGSPFNLESFC*IAFTSFFLVTKTTG
Trigger: GCCAGTTGTTTTTGTCACAAGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAAATTGAAAGGTGAACCAGGATGGGTCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 90 bp GCCTCTTCAATATTAAGTGGAAGCCTCTGGGAAAAACTCTCATCCTaGTCCAACCGTGTGCAAAGATTCTGCAGTTTCATCAGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ASSILSGSLWEKLSS*SNRVQRFCSFIRSP
Trigger: TGGGCTTCTGATGAAACTGCAGAATCTTTGCACACGGTTGGATCAGGATGAGAGTTTTTCCCAGAGGCTTCCACTTAATATTGAAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 90 bp TGTCACCCAGGCTGGACTCAAACTCCAGGGCTCAAGGAATCCTCATaGGATGAGCCCCTAACAGTGTGTACAAATAAAATTATGATTTGG +
Preference number: 5 (lower is better)
Translates to: CHPGWTQTPGLKESS*DEPLTVCTNKIMIW
Trigger: CCAAATCATAATTTTATTTGTACACACTGTTAGGGGCTCATCTCATGAGGATTCCTTGAGCCCTGGAGTTTGAGTCCAGCCTGGGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547666.1
CDS CCA 90 bp TGCATTCACCAGCTTCTTCCTTGTGACAAAAACAACTGGCCTCTGTaGTACTCCACCTTCACACAGGACTGTCCTTACATACGAAGTTAT +
Preference number: 5 (lower is better)
Translates to: CIHQLLPCDKNNWPL*YSTFTQDCPYIRSY
Trigger: ATAACTTCGTATGTAAGGACAGTCCTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGGTGAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000547045.5
ENST00000549007.1
ENST00000551964.6
ENST00000552268.5
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCTGGTTCTATCCCTTTaGCCCGGGATAGAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNLVLSL*PGIEQS
Trigger: TGACTGCTCTATCCCGGGCAAAAGGGATAGAACCAG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCAGCATAGCTGCTCTTaGCTGTTGAGTGGGCTCATT +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVQHSCS*LLSGLI
Trigger: AATGAGCCCACTCAACAGCAAAGAGCAGCTATGCTG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGAGACCTTGGGTGTTaGCGAAGCATCAGAATGCGG +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRDLGC*RSIRMR
Trigger: CCGCATTCTGATGCTTCGCAAACACCCAAGGTCTCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGAATCTGTAACACTCTaGTCTCTGGTTGTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKAESVTL*SLVVRR
Trigger: TCTTCTTACAACCAGAGACAAGAGTGTTACAGATTC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAAAGCACAAAGTTCCTaGTGCATCTTGGCACTGGCC +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVKAQSS*CILALA
Trigger: GGCCAGTGCCAAGATGCACAAGGAACTTTGTGCTTT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTTCTTCCATTAATGAGTaGCAGACGTCTTATATGGTC +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTSSINE*QTSYMV
Trigger: GACCATATAAGACGTCTGCAACTCATTAATGGAAGA...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS GCA 90 bp CTTCACACAGGACTGTCCTTACACTGGAAGAAGAGACAACAGGAATaGCATCATGGAGAAGGGCAGCAAGATCTTTATATCCTTCATGTA +
Preference number: 5 (lower is better)
Translates to: LHTGLSLHWKKRQQE*HHGEGQQDLYILHV
Trigger: TACATGAAGGATATAAAGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGTTGTCTCTTCTTCCAGTGTAAGGACAGTCCTGTGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359972.6
ENST00000550527.5
CDS CCA 90 bp AGGACTGTCCTTACACTGGAAGAAGAGACAACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCTTTATATCCTTCATGTAGTAGAGCA +
Preference number: 5 (lower is better)
Translates to: RTVLTLEEETTGMPS*RRAARSLYPSCSRA
Trigger: TGCTCTACTACATGAAGGATATAAAGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGTTGTCTCTTCTTCCAGTGTAAGGACAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359972.6
ENST00000550527.5
CDS-3UTR CAA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATCTGGTTCTATCCCTTTaGCCCGGGATAGAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYLVLSL*PGIEQS
Trigger: TGACTGCTCTATCCCGGGCAAAAGGGATAGAACCAG...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCAGCATAGCTGCTCTTaGCTGTTGAGTGGGCTCATT +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNQHSCS*LLSGLI
Trigger: AATGAGCCCACTCAACAGCAAAGAGCAGCTATGCTG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGAGCTTCTGCTGAATaGCATTCACCAGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRASAE*HSPASS
Trigger: GGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTAGAGACCTTGGGTGTTaGCGAAGCATCAGAATGCGG +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFRDLGC*RSIRMR
Trigger: CCGCATTCTGATGCTTCGCAAACACCCAAGGTCTCT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAGATCAAGAGAGACCTaGGGTGTTTGCGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVRSRET*GVCEAS
Trigger: TGATGCTTCGCAAACACCCAAGGTCTCTCTTGATCT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGAACAAAATCCTCCTCTaGACCGACTGCATGAACTGC +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVNKILL*TDCMNC
Trigger: GCAGTTCATGCAGTCGGTCAAGAGGAGGATTTTGTT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAAAGCACAAAGTTCCTaGTGCATCTTGGCACTGGCC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNKAQSS*CILALA
Trigger: GGCCAGTGCCAAGATGCACAAGGAACTTTGTGCTTT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTGCAATCAGCCACCTTaGAACGTGAGTCTGTATTCC +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVCNQPP*NVSLYS
Trigger: GGAATACAGACTCACGTTCAAAGGTGGCTGATTGCA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTGATACATTTGTCCAATaGCCAATTCCATACCTGAAT +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKADTFVQ*PIPYLN
Trigger: ATTCAGGTATGGAATTGGCAATTGGACAAATGTATC...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTGATACATTTGTCCAATaGCCAATTCCATACCTGAAT +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTDTFVQ*PIPYLN
Trigger: ATTCAGGTATGGAATTGGCAATTGGACAAATGTATC...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp GTGCCACCGCACCTGGCTCCTAATTTCTTTTTAAGACAAGGGCCATTCAAGGCTCGTAGAAAGATACATTaGTCCAATTGCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: VPPHLAPNFFLRQGPFKARRKIH*SNCQFH
Trigger: ATGGAATTGGCAATTGGACAAATGTATCTTTCTACG...AGCCTTGAATGGCCCTTGTCTTAAAAAGAAATTAGGAGCCAGGTGCGGTGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp CATCTGAGTGATCTATTCCCTTACCCTCTCCCCGACCTACCCCACAGTTATACTCGTAGAAAGATACATTaGTCCAATTGCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: HLSDLFPYPLPDLPHSYTRRKIH*SNCQFH
Trigger: ATGGAATTGGCAATTGGACAAATGTATCTTTCTACG...AGTATAACTGTGGGGTAGGTCGGGGAGAGGGTAAGGGAATAGATCACTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCACTGCCAAATGGTTTaGTGGGGAGAAGTCACAGTA +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVHCQMV*WGEVTV
Trigger: TACTGTGACTTCTCCCCACAAAACCATTTGGCAGTG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000550527.5
ENST00000551964.6
CDS GCA 90 bp CATCAGGAGAAAACATCACACCATGAACCCAACTTAAATGTCCTCTaGAATCAGCCACCTTTGAACGTGAGTCTGTATTCCACAACTCTA +
Preference number: 5 (lower is better)
Translates to: HQEKTSHHEPNLNVL*NQPPLNVSLYSTTL
Trigger: TAGAGTTGTGGAATACAGACTCACGTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTTGGGTTCATGGTGTGATGTTTTCTCCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGCTGCTCTTTGCTGTaGAGTGGGCTCATTTCTTAC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSCSLL*SGLISY
Trigger: GTAAGAAATGAGCCCACTCAACAGCAAAGAGCAGCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTCAGCATAGCTGCTCTTaGCTGTTGAGTGGGCTCATT +
Preference number: 5 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIQHSCS*LLSGLI
Trigger: AATGAGCCCACTCAACAGCAAAGAGCAGCTATGCTG...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGAGCTTCTGCTGAATaGCATTCACCAGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRASAE*HSPASS
Trigger: GGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAGATCAAGAGAGACCTaGGGTGTTTGCGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRSRET*GVCEAS
Trigger: TGATGCTTCGCAAACACCCAAGGTCTCTCTTGATCT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGACAGTCACATATGTTTaGAAGTCAGGGGACACGTGT +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVTVTYV*KSGDTC
Trigger: ACACGTGTCCCCTGACTTCAAAACATATGTGACTGT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACAACAAAATCCTCCTCTaGACCGACTGCATGAACTGC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNNKILL*TDCMNC
Trigger: GCAGTTCATGCAGTCGGTCAAGAGGAGGATTTTGTT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGCAATCAGCCACCTTaGAACGTGAGTCTGTATTCC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNCNQPP*NVSLYS
Trigger: GGAATACAGACTCACGTTCAAAGGTGGCTGATTGCA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp ACCTTCACACAGGACTGTCCTTACATACGAAGTTATTCCACTAACTaGATCTTTACCACTGGAAGAAGAGACAACAGGAATGCCATCATG +
Preference number: 5 (lower is better)
Translates to: TFTQDCPYIRSYSTN*IFTTGRRDNRNAIM
Trigger: CATGATGGCATTCCTGTTGTCTCTTCTTCCAGTGGTAAAGATTCAGTTAGTGGAATAACTTCGTATGTAAGGACAGTCCTGTGTGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000547045.5
ENST00000549007.1
ENST00000551964.6
ENST00000552268.5
CDS TCA 90 bp GATCTGGTGAAAGAGTATGCGGCTGGTGATATCTCTGAAACTGAGTaGTTATCTTCTTATGTAGATCCTGAAGCTGGCTGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: DLVKEYAAGDISETE*LSSYVDPEAGCNSS
Trigger: AGAAGAATTGCAGCCAGCTTCAGGATCTACATAAGAAGATAATCACTCAGTTTCAGAGATATCACCAGCCGCATACTCTTTCACCAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS GCA 90 bp CATCAGGAGAAAACATCACACCATGAACCCAACTTAAATGTCCTCTaGAATCAGCCACCTTTGAACGTGAGTCTGTATTCCACAAAAAGA +
Preference number: 5 (lower is better)
Translates to: HQEKTSHHEPNLNVL*NQPPLNVSLYSTKR
Trigger: TCTTTTTGTGGAATACAGACTCACGTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTTGGGTTCATGGTGTGATGTTTTCTCCTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
CDS CCA 90 bp ACTGAATCTTTACCACTGGAAGAAGAGACAACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCTTTATATCCTTCATGTAGTAGAGCA +
Preference number: 5 (lower is better)
Translates to: TESLPLEEETTGMPS*RRAARSLYPSCSRA
Trigger: TGCTCTACTACATGAAGGATATAAAGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGTTGTCTCTTCTTCCAGTGGTAAAGATTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000547045.5
ENST00000547743.1
ENST00000549007.1
ENST00000551964.6
ENST00000552268.5
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGCAGAGCTTCTCTATGTaGAAGCAAACAATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVQSFSM*KQTISS
Trigger: GCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCTG...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTAGCTGCTCTTTGCTGTaGAGTGGGCTCATTTCTTAC +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFSCSLL*SGLISY
Trigger: GTAAGAAATGAGCCCACTCAACAGCAAAGAGCAGCT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp AATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATAGAGCTTCTGCTGAATaGCATTCACCAGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: NTKIIHSHICFEVRGHVYRASAE*HSPASS
Trigger: GGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCT...ATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTAGAGCTTCTGCTGAATaGCATTCACCAGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFRASAE*HSPASS
Trigger: GGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGATCAGAAGCCCAGATTaGTCTTGTTTCCCAACTGAA +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVIRSPD*SCFPTE
Trigger: TTCAGTTGGGAAACAAGACAAATCTGGGCTTCTGAT...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTAGATCAAGAGAGACCTaGGGTGTTTGCGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIRSRET*GVCEAS
Trigger: TGATGCTTCGCAAACACCCAAGGTCTCTCTTGATCT...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGGAAAGGAAAATAGGTaGGCTGGAAGGTTAATCTTC +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVGKENR*AGRLIF
Trigger: GAAGATTAACCTTCCAGCCAACCTATTTTCCTTTCC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTGCTTTTCCTCTCATTaGCTGATGTCGCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNCFSSH*LMSHPK
Trigger: TTTGGGATGCGACATCAGCAAATGAGAGGAAAAGCA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGCAGAGATAAGCATTTaGCCATCTGGAGAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVAEISI*PSGEKQ
Trigger: TTGCTTTTCTCCAGATGGCAAAATGCTTATCTCTGC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp ATAGGCCAGAAAGTTGTACCAATACATACAGTCTTCCTGATCTGGTaGAAGAGTATGCGGCTGGTGATATCTCTGAAACTGAGTGATTAT +
Preference number: 5 (lower is better)
Translates to: IGQKVVPIHTVFLIW*KSMRLVISLKLSDY
Trigger: ATAATCACTCAGTTTCAGAGATATCACCAGCCGCATACTCTTTCACCAGATCAGGAAGACTGTATGTATTGGTACAACTTTCTGGCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp GAGATCAAAACTCCAGATCTTTGCAGTCTTGTCAGCAGAGGTAGATaGAAACTTGGTAGCATCGTGAGAAATGTCACAAGAAAGTACTGT +
Preference number: 5 (lower is better)
Translates to: EIKTPDLCSLVSRGR*KLGSIVRNVTRKYC
Trigger: ACAGTACTTTCTTGTGACATTTCTCACGATGCTACCAAGTTTTCATCTACCTCTGCTGACAAGACTGCAAAGATCTGGAGTTTTGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000550527.5
ENST00000551964.6
ENST00000552929.1
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACATCAGAAGCCCAGATTaGTCTTGTTTCCCAACTGAA +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNIRSPD*SCFPTE
Trigger: TTCAGTTGGGAAACAAGACAAATCTGGGCTTCTGAT...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGAATCTGTAACACTCTaGTCTCTGGTTGTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVESVTL*SLVVRR
Trigger: TCTTCTTACAACCAGAGACAAGAGTGTTACAGATTC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTACAGTCACATATGTTTaGAAGTCAGGGGACACGTGT +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFTVTYV*KSGDTC
Trigger: ACACGTGTCCCCTGACTTCAAAACATATGTGACTGT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGGAAAGGAAAATAGGTaGGCTGGAAGGTTAATCTTC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNGKENR*AGRLIF
Trigger: GAAGATTAACCTTCCAGCCAACCTATTTTCCTTTCC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCTCCTGTTTCAGCTTaGAACACCTGTAAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSPVSA*NTCKVL
Trigger: TAAAACCTTACAGGTGTTCAAAGCTGAAACAGGAGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTTCAAATCCCAAAGTTaGAGGAAGCAGTCACTTGAC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNFKSQS*RKQSLD
Trigger: GTCAAGTGACTGCTTCCTCAAACTTTGGGATTTGAA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGTCTTCCATTAATGAGTaGCAGACGTCTTATATGGTC +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVSSINE*QTSYMV
Trigger: GACCATATAAGACGTCTGCAACTCATTAATGGAAGA...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGCAGAGATAAGCATTTaGCCATCTGGAGAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNAEISI*PSGEKQ
Trigger: TTGCTTTTCTCCAGATGGCAAAATGCTTATCTCTGC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTCAGAGCTTCTCTATGTaGAAGCAAACAATTTCGAGC +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFQSFSM*KQTISS
Trigger: GCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCTG...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp ATACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTATCAGAAGCCCAGATTaGTCTTGTTTCCCAACTGAA +
Preference number: 5 (lower is better)
Translates to: IPRLSTVTYVLKSGDTCIIRSPD*SCFPTE
Trigger: TTCAGTTGGGAAACAAGACAAATCTGGGCTTCTGAT...AATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTATCAGAAGCCCAGATTaGTCTTGTTTCCCAACTGAA +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFIRSPD*SCFPTE
Trigger: TTCAGTTGGGAAACAAGACAAATCTGGGCTTCTGAT...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACGAATCTGTAACACTCTaGTCTCTGGTTGTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNESVTL*SLVVRR
Trigger: TCTTCTTACAACCAGAGACAAGAGTGTTACAGATTC...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTGGAAAGGAAAATAGGTaGGCTGGAAGGTTAATCTTC +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFGKENR*AGRLIF
Trigger: GAAGATTAACCTTCCAGCCAACCTATTTTCCTTTCC...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333991.5
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCTCCTGTTTCAGCTTaGAACACCTGTAAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSPVSA*NTCKVL
Trigger: TAAAACCTTACAGGTGTTCAAAGCTGAAACAGGAGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACTCTTCCATTAATGAGTaGCAGACGTCTTATATGGTC +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNSSINE*QTSYMV
Trigger: GACCATATAAGACGTCTGCAACTCATTAATGGAAGA...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp TTCCAACATACAAGTTTTACTTCACAAAAAGAACTGCTGAAGGCCAGGCCAGTGGATACATTTGTCCAATaGCCAATTCCATACCTGAAT +
Preference number: 5 (lower is better)
Translates to: FQHTSFTSQKELLKARPVDTFVQ*PIPYLN
Trigger: ATTCAGGTATGGAATTGGCAATTGGACAAATGTATC...CACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACTTGTATGTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS-3UTR CAA 90 bp ACCAAGATTATCCACAGTCACATATGTTTTGAAGTCAGGGGACACGTGTATTTTGAATCTGTAACACTCTaGTCTCTGGTTGTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: TKIIHSHICFEVRGHVYFESVTL*SLVVRR
Trigger: TCTTCTTACAACCAGAGACAAGAGTGTTACAGATTC...AAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS-3UTR CAA 90 bp ATATGTAAGAAACAAGAGGGAGCAGGAATAGTGTCCAACTCAGATACTGACAACCGTAGAAAGATACATTaGTCCAATTGCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: ICKKQEGAGIVSNSDTDNRRKIH*SNCQFH
Trigger: ATGGAATTGGCAATTGGACAAATGTATCTTTCTACG...GTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000550527.5
ENST00000551964.6
CDS TCA 90 bp AGCAGTCTTGAATTTTTCAAGAGTCTAAAGTCTTTCACTGTTTCCTaGTGGCCTCGTAGAAAGATACATTTGTCCAATTGCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: SSLEFFKSLKSFTVS*WPRRKIHLSNCQFH
Trigger: ATGGAATTGGCAATTGGACAAATGTATCTTTCTACGAGGCCATCAGGAAACAGTGAAAGACTTTAGACTCTTGAAAAATTCAAGACTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS GCA 72 bp CTTCCCGGCCTGTGGCGCCCTTCCCCCGACGGCGGCTaGACCCCGGAGGGAGCCCGGCGCTACTCCGGATGC +
Preference number: 6 (lower is better)
Translates to: LPGLWRPSPDGG*TPEGARRYSGC
Trigger: GCATCCGGAGTAGCGCCGGGCTCCCTCCGGGGTGCAGCCGCCGTCGGGGGAAGGGCGCCACAGGCCGGGAAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS GCA 72 bp GGCTGCACCCCGGAGGGAGCCCGGCGCTACTCCGGATaGCGCTGCGGCACCTCAAGTCTTCGCGGGTCGCCG +
Preference number: 6 (lower is better)
Translates to: GCTPEGARRYSG*RCGTSSLRGSP
Trigger: CGGCGACCCGCGAAGACTTGAGGTGCCGCAGCGGCATCCGGAGTAGCGCCGGGCTCCCTCCGGGGTGCAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS GCA 72 bp ACCCCGGAGGGAGCCCGGCGCTACTCCGGATGCCGCTaGGGCACCTCAAGTCTTCGCGGGTCGCCGACTGCC +
Preference number: 6 (lower is better)
Translates to: TPEGARRYSGCR*GTSSLRGSPTA
Trigger: GGCAGTCGGCGACCCGCGAAGACTTGAGGTGCCGCAGCGGCATCCGGAGTAGCGCCGGGCTCCCTCCGGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS CCA 72 bp GCCGCGGTGAGGCCCGGCCCACGGGCCGCCCTCCGGTaGACCCCACTACTGGACACAAAGGGAGGAGGTCTT +
Preference number: 6 (lower is better)
Translates to: AAVRPGPRAALR*TPLLDTKGGGL
Trigger: AAGACCTCCTCCCTTTGTGTCCAGTAGTGGGGTCCACCGGAGGGCGGCCCGTGGGCCGGGCCTCACCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS GCA 72 bp CCGCTGCGGCACCTCAAGTCTTCGCGGGTCGCCGACTaGCCAGACTCCCCACCTCTGGTTCTATCCCTTTTG +
Preference number: 6 (lower is better)
Translates to: PLRHLKSSRVAD*PDSPPLVLSLL
Trigger: CAAAAGGGATAGAACCAGAGGTGGGGAGTCTGGGCAGTCGGCGACCCGCGAAGACTTGAGGTGCCGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000551964.6
CDS CAA 90 bp CGGGTCGCCGACTGCCCAGACTCCCCACCTCTGGTTCTATCCCTTTaGCCCGGGATAGAGCAGTCACGTCCACTCGCTACCTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RVADCPDSPPLVLSL*PGIEQSRPLATSSS
Trigger: AGAAGAAGAGGTAGCGAGTGGACGTGACTGCTCTATCCCGGGCAAAAGGGATAGAACCAGAGGTGGGGAGTCTGGGCAGTCGGCGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551964.6
CDS TCA 72 bp AGTCACCCAGCCTCCATGGGTAGCAGCTCCTTCTTCTaGAAGCGGAGCACACAAATGAAGAAGCTCACCGTT +
Preference number: 6 (lower is better)
Translates to: SHPASMGSSSFF*KRSTQMKKLTV
Trigger: AACGGTGAGCTTCTTCATTTGTGTGCTCCGCTTTCAGAAGAAGGAGCTGCTACCCATGGAGGCTGGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS CAA 90 bp CAACTCTACACAGTACTGGGACAAAGCAACCACTGCCAAATGGTTTaGTGGGGAGAAGTCACAGTACTGGATGGTGCTGTGATGGCCCGT +
Preference number: 6 (lower is better)
Translates to: QLYTVLGQSNHCQMV*WGEVTVLDGAVMAR
Trigger: ACGGGCCATCACAGCACCATCCAGTACTGTGACTTCTCCCCACAAAACCATTTGGCAGTGGTTGCTTTGTCCCAGTACTGTGTAGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp TTTTGTGGGGAGAAGTCACAGTACTGGATGGTGCTGTaGTGGCCCGTGTGGATTTCTCCCAATAGGCCACTA +
Preference number: 6 (lower is better)
Translates to: FCGEKSQYWMVL*WPVWISPNRPL
Trigger: TAGTGGCCTATTGGGAGAAATCCACACGGGCCATCACAGCACCATCCAGTACTGTGACTTCTCCCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS GCA 72 bp ATTCCATATCCTGATTTCTCCATTGTCATCTCCCGTTaGCAGCAGGGTACTGTCCACAGAGAAGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: IPYPDFSIVISR*QQGTVHREGRA
Trigger: TGCTCTGCCTTCTCTGTGGACAGTACCCTGCTGGCAACGGGAGATGACAATGGAGAAATCAGGATATGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000550527.5
ENST00000551964.6
ENST00000552929.1
CDS CCA 72 bp CCAAATGGTTTTGTGGGGAGAAGTCACAGTACTGGATaGTGCTGTGATGGCCCGTGTGGATTTCTCCCAATA +
Preference number: 6 (lower is better)
Translates to: PNGFVGRSHSTG*CCDGPCGFLPI
Trigger: TATTGGGAGAAATCCACACGGGCCATCACAGCACCATCCAGTACTGTGACTTCTCCCCACAAAACCATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS CCA 72 bp GTACTGGGACAAAGCAACCACTGCCAAATGGTTTTGTaGGGAGAAGTCACAGTACTGGATGGTGCTGTGATG +
Preference number: 6 (lower is better)
Translates to: VLGQSNHCQMVL*GEVTVLDGAVM
Trigger: CATCACAGCACCATCCAGTACTGTGACTTCTCCCCACAAAACCATTTGGCAGTGGTTGCTTTGTCCCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS CAA 72 bp ACAGTACTGGGACAAAGCAACCACTGCCAAATGGTTTaGTGGGGAGAAGTCACAGTACTGGATGGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: TVLGQSNHCQMV*WGEVTVLDGAV
Trigger: CACAGCACCATCCAGTACTGTGACTTCTCCCCACAAAACCATTTGGCAGTGGTTGCTTTGTCCCAGTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp ATACAGACTTCCCACAGCCTGCCATTCCATGTATGGTaGCCCATCCTGGTTCACCTTTCAATTTGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: IQTSHSLPFHVW*PILVHLSIWRA
Trigger: AGCTCTCCAAATTGAAAGGTGAACCAGGATGGGTCACCATACATGGAATGGCAGGCTGTGGGAAGTCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 72 bp CTGCTTGGCCTGCAGCTTAGCTTGCTGATAAACTTCTaGAGTTTCCGGCTCACAGAGACCCAGTTGTACAAT +
Preference number: 6 (lower is better)
Translates to: LLGLQLSLLINF*SFRLTETQLYN
Trigger: ATTGTACAACTGGGTCTCTGTGAGCCGGAAACTTCAGAAGTTTATCAGCAAGCTAAGCTGCAGGCCAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000555047.1
CDS GCA 72 bp CCACAACTCTACACAGTACTGGGACAAAGCAACCACTaGCAAATGGTTTTGTGGGGAGAAGTCACAGTACTG +
Preference number: 6 (lower is better)
Translates to: PQLYTVLGQSNH*QMVLWGEVTVL
Trigger: CAGTACTGTGACTTCTCCCCACAAAACCATTTGGCAGTGGTTGCTTTGTCCCAGTACTGTGTAGAGTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS CCA 72 bp CAGCTTCTTCCTTGTGACAAAAACAACTGGCCTCTGTaGTACTCCACCTTCACACAGGACTGTCCTTACACT +
Preference number: 6 (lower is better)
Translates to: QLLPCDKNNWPL*YSTFTQDCPYT
Trigger: AGTGTAAGGACAGTCCTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359972.6
ENST00000550527.5
CDS CAA 72 bp TCACCGTTTGAGACATTCCATATCCTGATTTCTCCATaGTCATCTCCCGTTGCCAGCAGGGTACTGTCCACA +
Preference number: 6 (lower is better)
Translates to: SPFETFHILISP*SSPVASRVLST
Trigger: TGTGGACAGTACCCTGCTGGCAACGGGAGATGACAATGGAGAAATCAGGATATGGAATGTCTCAAACGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000550527.5
ENST00000551964.6
CDS CAA 72 bp CCATCGTTTGAGACATTCCATATCCTGATTTCTCCATaGTCATCTCCCGTTGCCAGCAGGGTACTGTCCACA +
Preference number: 6 (lower is better)
Translates to: PSFETFHILISP*SSPVASRVLST
Trigger: TGTGGACAGTACCCTGCTGGCAACGGGAGATGACAATGGAGAAATCAGGATATGGAATGTCTCAAACGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552929.1
CDS CAA 90 bp TCCAACCGTGTGCAAAGATTCTGCAGTTTCATCAGAAGCCCAGATTaGTCTTGTTTCCCAACTGAAACCCAATGCACTCCCCCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: SNRVQRFCSFIRSPD*SCFPTETQCTPPGK
Trigger: TTTCCCAGGGGGAGTGCATTGGGTTTCAGTTGGGAAACAAGACAAATCTGGGCTTCTGATGAAACTGCAGAATCTTTGCACACGGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS CAA 90 bp AGCATTTTGCCATCGTTTGAGACATTCCATATCCTGATTTCTCCATaGTCATCTCCCGTTGCCAGCAGGGTACTGTCCACAGAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: SILPSFETFHILISP*SSPVASRVLSTEKA
Trigger: TGCCTTCTCTGTGGACAGTACCCTGCTGGCAACGGGAGATGACAATGGAGAAATCAGGATATGGAATGTCTCAAACGATGGCAAAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552929.1
CDS CAA 90 bp ACAACGTTCCACCACTTAATATATCCTCCAGCAGAGATAAGCATTTaGCCATCTGGAGAAAAGCAAAGGTCAGTCACCCAGCCTCCATGG +
Preference number: 6 (lower is better)
Translates to: TTFHHLIYPPAEISI*PSGEKQRSVTQPPW
Trigger: CCATGGAGGCTGGGTGACTGACCTTTGCTTTTCTCCAGATGGCAAAATGCTTATCTCTGCTGGAGGATATATTAAGTGGTGGAACGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp GCTTCTGCTGAATTGCATTCACCAGCTTCTTCCTTGTaGCAAAAACAACTGGCCTCTGTGGTACTCCACCTT +
Preference number: 6 (lower is better)
Translates to: ASAELHSPASSL*QKQLASVVLHL
Trigger: AAGGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 72 bp GTAGCAGCTCCTTCTTCTGAAAGCGGAGCACACAAATaGAGAAGCTCACCGTTTGAGACATTCCATATCCTG +
Preference number: 6 (lower is better)
Translates to: VAAPSSESGAHK*RSSPFETFHIL
Trigger: CAGGATATGGAATGTCTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGCTTTCAGAAGAAGGAGCTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000550527.5
ENST00000551964.6
CDS GCA 72 bp AGCCCAGATTTGTCTTGTTTCCCAACTGAAACCCAATaGACTCCCCCTGGGAAACAACCTTCTAAAAGGGAA +
Preference number: 6 (lower is better)
Translates to: SPDLSCFPTETQ*TPPGKQPSKRE
Trigger: TTCCCTTTTAGAAGGTTGTTTCCCAGGGGGAGTGCATTGGGTTTCAGTTGGGAAACAAGACAAATCTGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS GCA 72 bp GCCTCTGGGAAAAACTCTCATCCTGATCCAACCGTGTaGAAAGATTCTGCAGTTTCATCAGAAGCCCAGATT +
Preference number: 6 (lower is better)
Translates to: ASGKNSHPDPTV*KDSAVSSEAQI
Trigger: AATCTGGGCTTCTGATGAAACTGCAGAATCTTTGCACACGGTTGGATCAGGATGAGAGTTTTTCCCAGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS CCA 72 bp CAGCTTCTTCCTTGTGACAAAAACAACTGGCCTCTGTaGTACTCCACCTTCACACAGGACTGTCCTTACATA +
Preference number: 6 (lower is better)
Translates to: QLLPCDKNNWPL*YSTFTQDCPYI
Trigger: TATGTAAGGACAGTCCTGTGTGAAGGTGGAGTACCACAGAGGCCAGTTGTTTTTGTCACAAGGAAGAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000547045.5
ENST00000549007.1
ENST00000551964.6
ENST00000552268.5
CDS CAA 90 bp TCACACCATGAACCCAACTTAAATGTCCTCTGCAATCAGCCACCTTaGAACGTGAGTCTGTATTCCACAACTCTACACAGTACTGGGACA +
Preference number: 6 (lower is better)
Translates to: SHHEPNLNVLCNQPP*NVSLYSTTLHSTGT
Trigger: TGTCCCAGTACTGTGTAGAGTTGTGGAATACAGACTCACGTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTTGGGTTCATGGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp TGCACTCCCCCTGGGAAACAACCTTCTAAAAGGGAATaGTCTCTAACAGCTTCTGCAGCTAATACAGACTTC +
Preference number: 6 (lower is better)
Translates to: CTPPGKQPSKRE*SLTASAANTDF
Trigger: GAAGTCTGTATTAGCTGCAGAAGCTGTTAGAGATCATTCCCTTTTAGAAGGTTGTTTCCCAGGGGGAGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS CAA 72 bp GTGCAAAGATTCTGCAGTTTCATCAGAAGCCCAGATTaGTCTTGTTTCCCAACTGAAACCCAATGCACTCCC +
Preference number: 6 (lower is better)
Translates to: VQRFCSFIRSPD*SCFPTETQCTP
Trigger: GGGAGTGCATTGGGTTTCAGTTGGGAAACAAGACAAATCTGGGCTTCTGATGAAACTGCAGAATCTTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 72 bp GTAGCAGCTCCTTCTTCTGAAAGCGGAGCACACAAATaGAGAAGCTCACCGTTTGAGACATTCCATATCTTT +
Preference number: 6 (lower is better)
Translates to: VAAPSSESGAHK*RSSPFETFHIF
Trigger: AAAGATATGGAATGTCTCAAACGGTGAGCTTCTTCATTTGTGTGCTCCGCTTTCAGAAGAAGGAGCTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549007.1
CDS CAA 72 bp GAACCCAACTTAAATGTCCTCTGCAATCAGCCACCTTaGAACGTGAGTCTGTATTCCACAACTCTACACAGT +
Preference number: 6 (lower is better)
Translates to: EPNLNVLCNQPP*NVSLYSTTLHS
Trigger: ACTGTGTAGAGTTGTGGAATACAGACTCACGTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTTGGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546491.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp CATCCTGGTTCACCTTTCAATTTGGAGAGCTTCTGCTaGATTGCATTCACCAGCTTCTTCCTTGTGACAAAA +
Preference number: 6 (lower is better)
Translates to: HPGSPFNLESFC*IAFTSFFLVTK
Trigger: TTTTGTCACAAGGAAGAAGCTGGTGAATGCAATTCAGCAGAAGCTCTCCAAATTGAAAGGTGAACCAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 72 bp ATATTAAGTGGAAGCCTCTGGGAAAAACTCTCATCCTaGTCCAACCGTGTGCAAAGATTCTGCAGTTTCATC +
Preference number: 6 (lower is better)
Translates to: ILSGSLWEKLSS*SNRVQRFCSFI
Trigger: GATGAAACTGCAGAATCTTTGCACACGGTTGGATCAGGATGAGAGTTTTTCCCAGAGGCTTCCACTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 72 bp AAAGAGTATGCGGCTGGTGATATCTCTGAAACTGAGTaGTTATCTTCTTATGTAGATCCTGAAGCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: KEYAAGDISETE*LSSYVDPEAGC
Trigger: GCAGCCAGCTTCAGGATCTACATAAGAAGATAATCACTCAGTTTCAGAGATATCACCAGCCGCATACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp ACTCCAGATCTTTGCAGTCTTGTCAGCAGAGGTAGATaGAAACTTGGTAGCATCGTGAGAAATGTCACAAGA +
Preference number: 6 (lower is better)
Translates to: TPDLCSLVSRGR*KLGSIVRNVTR
Trigger: TCTTGTGACATTTCTCACGATGCTACCAAGTTTTCATCTACCTCTGCTGACAAGACTGCAAAGATCTGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000550527.5
ENST00000551964.6
ENST00000552929.1
CDS GCA 72 bp AAAACATCACACCATGAACCCAACTTAAATGTCCTCTaGAATCAGCCACCTTTGAACGTGAGTCTGTATTCC +
Preference number: 6 (lower is better)
Translates to: KTSHHEPNLNVL*NQPPLNVSLYS
Trigger: GGAATACAGACTCACGTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTTGGGTTCATGGTGTGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000546491.1
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS CCA 72 bp TTACCACTGGAAGAAGAGACAACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCTTTATATCCTTCATGT +
Preference number: 6 (lower is better)
Translates to: LPLEEETTGMPS*RRAARSLYPSC
Trigger: ACATGAAGGATATAAAGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGTTGTCTCTTCTTCCAGTGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000547045.5
ENST00000547743.1
ENST00000549007.1
ENST00000551964.6
ENST00000552268.5
CDS CCA 72 bp CTTACACTGGAAGAAGAGACAACAGGAATGCCATCATaGAGAAGGGCAGCAAGATCTTTATATCCTTCATGT +
Preference number: 6 (lower is better)
Translates to: LTLEEETTGMPS*RRAARSLYPSC
Trigger: ACATGAAGGATATAAAGATCTTGCTGCCCTTCTCCATGATGGCATTCCTGTTGTCTCTTCTTCCAGTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359972.6
ENST00000550527.5
CDS TCA 72 bp AAAGTTGTACCAATACATACAGTCTTCCTGATCTGGTaGAAGAGTATGCGGCTGGTGATATCTCTGAAACTG +
Preference number: 6 (lower is better)
Translates to: KVVPIHTVFLIW*KSMRLVISLKL
Trigger: CAGTTTCAGAGATATCACCAGCCGCATACTCTTTCACCAGATCAGGAAGACTGTATGTATTGGTACAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp AAAAATGATGATCCATCAGGAGAAAACATCACACCATaGACCCAACTTAAATGTCCTCTGCAATCAGCCACC +
Preference number: 6 (lower is better)
Translates to: KNDDPSGENITP*TQLKCPLQSAT
Trigger: GGTGGCTGATTGCAGAGGACATTTAAGTTGGGTTCATGGTGTGATGTTTTCTCCTGATGGATCATCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000546491.1
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS CAA 90 bp CATGATGTAGGATGTCTTGATGTCCTTTTCCAGAGCTTCTCTATGTaGAAGCAAACAATTTCGAGCTTTTGCATCCATCTTCCCTCAGAT +
Preference number: 6 (lower is better)
Translates to: HDVGCLDVLFQSFSM*KQTISSFCIHLPSD
Trigger: ATCTGAGGGAAGATGGATGCAAAAGCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCTGGAAAAGGACATCAAGACATCCTACATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547743.1
ENST00000551964.6
ENST00000552268.5
CDS CAA 90 bp ACAACGTTCCACCACTTAATATATCCTCCAGCAGAGATAAGCATTTaGCCATCGTTTGAGACATTCCATATCCTGATTTCTCCATTGTCA +
Preference number: 6 (lower is better)
Translates to: TTFHHLIYPPAEISI*PSFETFHILISPLS
Trigger: TGACAATGGAGAAATCAGGATATGGAATGTCTCAAACGATGGCAAAATGCTTATCTCTGCTGGAGGATATATTAAGTGGTGGAACGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552929.1
CDS TCA 72 bp GATGTCTTGATGTCCTTTTCCAGAGCTTCTCTATGTTaGAGCAAACAATTTCGAGCTTTTGCATCCATCTTC +
Preference number: 6 (lower is better)
Translates to: DVLMSFSRASLC*SKQFRAFASIF
Trigger: GAAGATGGATGCAAAAGCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCTGGAAAAGGACATCAAGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000547743.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 72 bp CAGGACTGTCCTTACATACGAAGTTATTCCACTAACTaGATCTTTACCACTGGAAGAAGAGACAACAGGAAT +
Preference number: 6 (lower is better)
Translates to: QDCPYIRSYSTN*IFTTGRRDNRN
Trigger: ATTCCTGTTGTCTCTTCTTCCAGTGGTAAAGATTCAGTTAGTGGAATAACTTCGTATGTAAGGACAGTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000547045.5
ENST00000549007.1
ENST00000551964.6
ENST00000552268.5
CDS TCA 72 bp CCAATTCCATACCTGAATTTCAGCATCATCAGAACTTaGAATAAGAGTCTTCTCATCGGCTGTGAACTGGAT +
Preference number: 6 (lower is better)
Translates to: PIPYLNFSIIRT*NKSLLIGCELD
Trigger: ATCCAGTTCACAGCCGATGAGAAGACTCTTATTTCAAGTTCTGATGATGCTGAAATTCAGGTATGGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp ATTCCATATCTTTGCAGTCTTGTCAGCAGAGGTAGATaGAAACTTGGTAGCATCGTGAGAAATGTCACAAGA +
Preference number: 6 (lower is better)
Translates to: IPYLCSLVSRGR*KLGSIVRNVTR
Trigger: TCTTGTGACATTTCTCACGATGCTACCAAGTTTTCATCTACCTCTGCTGACAAGACTGCAAAGATATGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549007.1
CDS CAA 72 bp GGATGTCTTGATGTCCTTTTCCAGAGCTTCTCTATGTaGAAGCAAACAATTTCGAGCTTTTGCATCCATCTT +
Preference number: 6 (lower is better)
Translates to: GCLDVLFQSFSM*KQTISSFCIHL
Trigger: AAGATGGATGCAAAAGCTCGAAATTGTTTGCTTCAACATAGAGAAGCTCTGGAAAAGGACATCAAGACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000333991.5
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000547743.1
ENST00000550527.5
ENST00000551964.6
ENST00000552268.5
CDS TCA 72 bp TTCCATTTGTGTAGAAGGTCTGTGAGGATTCCCCAGTaGCAACGTTCCACCACTTTACATTCTTTTATAATA +
Preference number: 6 (lower is better)
Translates to: FHLCRRSVRIPQ*QRSTTLHSFII
Trigger: TATTATAAAAGAATGTAAAGTGGTGGAACGTTGTCACTGGGGAATCCTCACAGACCTTCTACACAAATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5
CDS CAA 72 bp GAACCCAACTTAAATGTCCTCTGCAATCAGCCACCTTaGAACGTGAGTCTGTATTCCACAAAAAGATTTTAT +
Preference number: 6 (lower is better)
Translates to: EPNLNVLCNQPP*NVSLYSTKRFY
Trigger: ATAAAATCTTTTTGTGGAATACAGACTCACGTTCAAAGGTGGCTGATTGCAGAGGACATTTAAGTTGGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
CDS CAA 72 bp CACCACTTAATATATCCTCCAGCAGAGATAAGCATTTaGCCATCGTTTGAGACATTCCATATCCTGATTTCT +
Preference number: 6 (lower is better)
Translates to: HHLIYPPAEISI*PSFETFHILIS
Trigger: AGAAATCAGGATATGGAATGTCTCAAACGATGGCAAAATGCTTATCTCTGCTGGAGGATATATTAAGTGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552929.1
CDS TCA 72 bp CCAAAAGCTTATCATCTGGTGAAAATCTGCAGTGATTaGCTGAATTTGTATGACCAAACATGGTATTTCGAC +
Preference number: 6 (lower is better)
Translates to: PKAYHLVKICSD*LNLYDQTWYFD
Trigger: GTCGAAATACCATGTTTGGTCATACAAATTCAGTCAATCACTGCAGATTTTCACCAGATGATAAGCTTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357310.5
ENST00000359972.6
ENST00000547045.5
ENST00000549007.1
ENST00000550527.5
ENST00000551964.6
CDS TCA 72 bp CAACGTTCCACCACTTTACATTCTTTTATAATACTATaGGCTTGTTCTGGCAAATCTGCCTTCTTCATATTA +
Preference number: 6 (lower is better)
Translates to: QRSTTLHSFIIL*ACSGKSAFFIL
Trigger: TAATATGAAGAAGGCAGATTTGCCAGAACAAGCTCATAGTATTATAAAAGAATGTAAAGTGGTGGAACGTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333991.5
ENST00000552268.5