RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP4S1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100478

Ensembl transcript IDs: ENST00000216366.8, ENST00000313566.11, ENST00000334725.8, ENST00000542754.7, ENST00000554345.5, ENST00000554345.6, ENST00000554609.6, ENST00000555417.6, ENST00000616371.4, ENST00000622409.4, ENST00000672143.1, ENST00000673001.1, ENST00000673317.1

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAGAGACTCCAGCCTGCTCTTGCTTCTCTCCCCAGGCACGTAGGTaGGACATCCCAGCTACCACCCAGCCTTCTTATCATTCCTGCCCC +
Preference number: 1 (lower is better)
Translates to: VETPACSCFSPQARR*DIPATTQPSYHSCP
Trigger: GGGGCAGGAATGATAAGAAGGCTGGGTGGTAGCTGGGATGTCCCACCTACGTGCCTGGGGAGAGAAGCAAGAGCAGGCTGGAGTCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR GCA 90 bp ATCGAGGCCTGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTaGACACCATCATTCTCCAGGAAGCACCATGGCAGATGCTGGCGG +
Preference number: 1 (lower is better)
Translates to: IEACLQTMVVLITVA*TPSFSRKHHGRCWR
Trigger: CCGCCAGCATCTGCCATGGTGCTTCCTGGAGAATGATGGTGTGCAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACAGGCCTCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR TCA 90 bp CACCATGGCAGATGCTGGCGGAGTCACAGAGAGTGCACACAGCATTaGTGCCCTTCCTATGTCCCACCCTCAACTGCAATAGAAGGGACA +
Preference number: 1 (lower is better)
Translates to: HHGRCWRSHRECTQH*CPSYVPPSTAIEGT
Trigger: TGTCCCTTCTATTGCAGTTGAGGGTGGGACATAGGAAGGGCATCAATGCTGTGTGCACTCTCTGTGACTCCGCCAGCATCTGCCATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR CCA 90 bp GCTGATCACTGTTGCCTGCACACCATCATTCTCCAGGAAGCACCATaGCAGATGCTGGCGGAGTCACAGAGAGTGCACACAGCATTGATG +
Preference number: 1 (lower is better)
Translates to: ADHCCLHTIILQEAP*QMLAESQRVHTALM
Trigger: CATCAATGCTGTGTGCACTCTCTGTGACTCCGCCAGCATCTGCCATGGTGCTTCCTGGAGAATGATGGTGTGCAGGCAACAGTGATCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR GCA 90 bp ATTTGTGCCTCACAAGAATACAAAGTAGAGACTCCAGCCTGCTCTTaGTTCTCTCCCCAGGCACGTAGGTGGGACATCCCAGCTACCACC +
Preference number: 1 (lower is better)
Translates to: ICASQEYKVETPACS*FSPQARRWDIPATT
Trigger: GGTGGTAGCTGGGATGTCCCACCTACGTGCCTGGGGAGAGAAGCAAGAGCAGGCTGGAGTCTCTACTTTGTATTCTTGTGAGGCACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR CCA 90 bp GTACCTTCACGCGTAGAGCAGGTACGCACTGATTTGAAGAGTAGTTaGTGTGTCTCCCATACTGTGCTGTTCATTGGTGCCCTCCCCTGG +
Preference number: 1 (lower is better)
Translates to: VPSRVEQVRTDLKSS*CVSHTVLFIGALPW
Trigger: CCAGGGGAGGGCACCAATGAACAGCACAGTATGGGAGACACACCAACTACTCTTCAAATCAGTGCGTACCTGCTCTACGCGTGAAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR CCA 90 bp CAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTaGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAAC +
Preference number: 1 (lower is better)
Translates to: QAPQVEKEAAVLCVA*PVAATSAWVRPKRN
Trigger: GTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR GCA 90 bp TCCCATATTGTGGAGCTACTGTCTGACACGCTCCTATCTGCTTTCTaGTGGGTCTCACAAACTCCTGTCCCTTTCCAGGCTGGATTGATG +
Preference number: 1 (lower is better)
Translates to: SHIVELLSDTLLSAF*WVSQTPVPFQAGLM
Trigger: CATCAATCCAGCCTGGAAAGGGACAGGAGTTTGTGAGACCCAGCAGAAAGCAGATAGGAGCGTGTCAGACAGTAGCTCCACAATATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CCA 90 bp CATATTGTGGAGCTACTGTCTGACACGCTCCTATCTGCTTTCTGCTaGGTCTCACAAACTCCTGTCCCTTTCCAGGCTGGATTGATGTCA +
Preference number: 1 (lower is better)
Translates to: HIVELLSDTLLSAFC*VSQTPVPFQAGLMS
Trigger: TGACATCAATCCAGCCTGGAAAGGGACAGGAGTTTGTGAGACCCAGCAGAAAGCAGATAGGAGCGTGTCAGACAGTAGCTCCACAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR TCA 90 bp TTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTaGAAAACAACTGTCCAGACAAGACATCTGCTGCTGCAGGCTCCT +
Preference number: 1 (lower is better)
Translates to: FHPLFQAQRNHGAAW*KTTVQTRHLLLQAP
Trigger: AGGAGCCTGCAGCAGCAGATGTCTTGTCTGGACAGTTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR TCA 90 bp GACAGCACTGATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCTaGCACGCTCCTATCTGCTTTCTGCTGGGTCTCACAAACTCCTGT +
Preference number: 1 (lower is better)
Translates to: DSTDEKLIPYCGATV*HAPICFLLGLTNSC
Trigger: ACAGGAGTTTGTGAGACCCAGCAGAAAGCAGATAGGAGCGTGTCAGACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CCA 90 bp GCAGCTCCTTTGAATGATGAACTGTCTGGAGAAAAGCAAGTCTGCTaGGGCTCCAGGGCTGAGCATATTTTGGGAAGTTCATCAATTGGT +
Preference number: 1 (lower is better)
Translates to: AAPLNDELSGEKQVC*GSRAEHILGSSSIG
Trigger: ACCAATTGATGAACTTCCCAAAATATGCTCAGCCCTGGAGCCCCAGCAGACTTGCTTTTCTCCAGACAGTTCATCATTCAAAGGAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR CCA 90 bp ATGTCTTTAAATCAAGAAAACATTCCGGATTCTAGCCTATATTTGTaGGGCCTGGATTCTAGCCTATATTTGTGCCTCACAAGAATACAA +
Preference number: 1 (lower is better)
Translates to: MSLNQENIPDSSLYL*GLDSSLYLCLTRIQ
Trigger: TTGTATTCTTGTGAGGCACAAATATAGGCTAGAATCCAGGCCCCACAAATATAGGCTAGAATCCGGAATGTTTTCTTGATTTAAAGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR-3UTR GCA 90 bp GCCCCTGGCTGTCCAGGCCTGAAGGCAGTACTGCTGCATTCCAGTCTAGCCCAAGGGCTGGTGGGCATCTaGCCCATGATGGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: APGCPGLKAVLLHSSLAQGLVGI*PMMGKG
Trigger: CCCTTTCCCCATCATGGGGCAGATGCCCACCAGCCC...TTGGGCTAGACTGGAATGCAGCAGTACTGCCTTCAGGCCTGGACAGCCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR GCA 90 bp TGCCTGCACACCATCATTCTCCAGGAAGCACCATGGCAGATGCTGGCGGAGTCAGGGCTGGTGGGCATCTaGCCCATGATGGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: CLHTIILQEAPWQMLAESGLVGI*PMMGKG
Trigger: CCCTTTCCCCATCATGGGGCAGATGCCCACCAGCCC...TGACTCCGCCAGCATCTGCCATGGTGCTTCCTGGAGAATGATGGTGTGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR TCA 90 bp ATCGAGGCCTGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTGCACACCATGGGCATCTGCCCCATaGTGGGGAAAGGGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: IEACLQTMVVLITVACTPWASAP*WGKGAG
Trigger: GCCAGCACCCTTTCCCCATCATGGGGCAGATGCCCA...TGGTGTGCAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACAGGCCTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CCA 90 bp AGACTCCAGCCTGCTCTTGCTTCTCTCCCCAGGCACGTAGGTGGGACATCCCAGGGCTTGCAGAGGCCATaGTGGCAGGTTCTGGGATAT +
Preference number: 2 (lower is better)
Translates to: RLQPALASLPRHVGGTSQGLQRP*WQVLGY
Trigger: ATATCCCAGAACCTGCCACCATGGCCTCTGCAAGCC...CTGGGATGTCCCACCTACGTGCCTGGGGAGAGAAGCAAGAGCAGGCTGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR-3UTR CCA 90 bp GGGTGCTGGCGAAGCAGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAATTGGTGCCCTCCCCTaGCTATTCAGTAGATGGGGG +
Preference number: 2 (lower is better)
Translates to: GCWRSRHRMGLLEHRARGIGALP*LFSRWG
Trigger: CCCCCATCTACTGAATAGCCAGGGGAGGGCACCAAT...TCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCAGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR-3UTR TCA 90 bp CTTCTTATCATTCCTGCCCCTAGTCTTGGGGTGAAGGTGGAGGAGAGGCTTGCATGGGCATCTGCCCCATaGTGGGGAAAGGGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: LLIIPAPSLGVKVEERLAWASAP*WGKGAG
Trigger: GCCAGCACCCTTTCCCCATCATGGGGCAGATGCCCA...TGCAAGCCTCTCCTCCACCTTCACCCCAAGACTAGGGGCAGGAATGATAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR-3UTR GCA 90 bp GCCCCTGGCTGTCCAGGCCTGAAGGCAGTACTGCTGCATTCCAGTCTAGCCCAAGTGTCTCCCATACTGTaGTGTTCATTGGTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: APGCPGLKAVLLHSSLAQVSPIL*CSLVPS
Trigger: GGAGGGCACCAATGAACAGCACAGTATGGGAGACAC...TTGGGCTAGACTGGAATGCAGCAGTACTGCCTTCAGGCCTGGACAGCCAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR GCA 90 bp TGGCGAAGCAGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTGTGTCTCCCATACTGTaGTGTTCATTGGTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: WRSRHRMGLLEHRARGAPVSPIL*CSLVPS
Trigger: GGAGGGCACCAATGAACAGCACAGTATGGGAGACAC...AGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR TCA 90 bp GATGCTGGCGGAGTCACAGAGAGTGCACACAGCATTGATGCCCTTCCTATGTCCCTGGCTGTCCAGGCCTaGAGGCAGTACTGCTGCATT +
Preference number: 2 (lower is better)
Translates to: DAGGVTESAHSIDALPMSLAVQA*RQYCCI
Trigger: AATGCAGCAGTACTGCCTTCAGGCCTGGACAGCCAG...GGACATAGGAAGGGCATCAATGCTGTGTGCACTCTCTGTGACTCCGCCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR GCA 90 bp CACACCATCATTCTCCAGGAAGCACCATGGCAGATGCTGGCGGAGTCACAGAGAACAATCATGGCTCACTaGAGCCTCAGTCCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: HTIILQEAPWQMLAESQRTIMAH*SLSPPG
Trigger: GCCTGGGGGACTGAGGCTGCAGTGAGCCATGATTGT...TCTCTGTGACTCCGCCAGCATCTGCCATGGTGCTTCCTGGAGAATGATGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CCA 90 bp TTCTCTCCCCAGGCACGTAGGTGGGACATCCCAGCTACCACCCAGCCTTCTTATGGCTTGCAGAGGCCATaGTGGCAGGTTCTGGGATAT +
Preference number: 2 (lower is better)
Translates to: FSPQARRWDIPATTQPSYGLQRP*WQVLGY
Trigger: ATATCCCAGAACCTGCCACCATGGCCTCTGCAAGCC...ATAAGAAGGCTGGGTGGTAGCTGGGATGTCCCACCTACGTGCCTGGGGAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR-3UTR CCA 90 bp AGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTGGCTGTCCATACTGTGCTGTTCATTaGTGCCCTCCCCTGGCTATT +
Preference number: 2 (lower is better)
Translates to: RHRMGLLEHRARGAPGCPYCAVH*CPPLAI
Trigger: AATAGCCAGGGGAGGGCACCAATGAACAGCACAGTA...TGGACAGCCAGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR CAA 90 bp GCACCATGGCAGATGCTGGCGGAGTCACAGAGAGTGCACACAGCATaGATGCCCTTCCTATGTCCCACCCTCAACTGCAATAGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: APWQMLAESQRVHTA*MPFLCPTLNCNRRD
Trigger: GTCCCTTCTATTGCAGTTGAGGGTGGGACATAGGAAGGGCATCAATGCTGTGTGCACTCTCTGTGACTCCGCCAGCATCTGCCATGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCAGGGGTTACAGGTGTaGGGCACTGCACCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSQGLQV*GTAPAP
Trigger: TGGGGCTGGTGCAGTGCCTCACACCTGTAACCCCTG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR GCA 90 bp ACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGCGTAGAGCAGGTACGCACGGAGAAAAGCAAGTCTaGTGGGGCTCCAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: TEKAVEVFCTFTRRAGTHGEKQV*WGSRAE
Trigger: CTCAGCCCTGGAGCCCCAGCAGACTTGCTTTTCTCC...GTGCGTACCTGCTCTACGCGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR-3UTR CCA 90 bp GACAAGACATCTGCTGCTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTCAGCACCGGGTGTGGTaGCGGATCCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: DKTSAAAGSSSRKGSSSSQHRVW*RIPVVP
Trigger: TGGGACTACAGGGATCCGCCACCACACCCGGTGCTG...AGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAGCAGCAGATGTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR-3UTR TCA 90 bp TGGCGAAGCAGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTAGGTACGCACTGATTTaGAGAGTAGTTGGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: WRSRHRMGLLEHRARGAPRYALI*RVVGVS
Trigger: AGACACACCAACTACTCTTCAAATCAGTGCGTACCT...AGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR CCA 90 bp AAAGGGTGCTGGCGAAGCAGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAATGGGGAAAGGGTGCTaGCGAAGCAGACATAGAATG +
Preference number: 2 (lower is better)
Translates to: KGCWRSRHRMGLLEHRARMGKGC*RSRHRM
Trigger: CATTCTATGTCTGCTTCGCCAGCACCCTTTCCCCAT...TCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCAGCACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR CCA 90 bp GGCCTGATCGAGGCCTGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTGCGCTCTGTTGCCAGATTaGAGTGCAGTAGCACAATCA +
Preference number: 2 (lower is better)
Translates to: GLIEACLQTMVVLITVACALLPD*SAVAQS
Trigger: TGATTGTGCTACTGCACTCCAATCTGGCAACAGAGC...GCAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACAGGCCTCGATCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CCA 90 bp AAGGAAAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCAGCACCGGGTGTGGTaGCGGATCCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: KENLTSSLHQGTTLIQWHQHRVW*RIPVVP
Trigger: TGGGACTACAGGGATCCGCCACCACACCCGGTGCTG...ATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR-3UTR CCA 90 bp ACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGGCAGCGACATCAGCTTaGGTTCGACCAAAACGGAAC +
Preference number: 2 (lower is better)
Translates to: TSSLHQGTTLIQWHHPNLAATSA*VRPKRN
Trigger: GTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGC...CAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR TCA 90 bp GGGCCTGATCGAGGCCTGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTGAAAGGCACCAAATACTaGAAAGGCCGTGGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: GPDRGLSANHGGADHCCLKGTKY*KGRGGF
Trigger: AAAACCTCCACGGCCTTTTCAGTATTTGGTGCCTTT...CAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACAGGCCTCGATCAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR GCA 90 bp GGGCCTGATCGAGGCCTGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTGTGTCCCACCCTCAACTaGAATAGAAGGGACATGAAT +
Preference number: 2 (lower is better)
Translates to: GPDRGLSANHGGADHCCLCPTLN*NRRDMN
Trigger: ATTCATGTCCCTTCTATTGCAGTTGAGGGTGGGACA...CAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACAGGCCTCGATCAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCCCGGAAGTGGAGGTTaGAGTGAGCCGAGAATGTGC +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSPGSGG*SEPRMC
Trigger: GCACATTCTCGGCTCACTGCAACCTCCACTTCCGGG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CCA 90 bp AGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTGGCTGTCCAATACTGAAAAGGCCGTaGAGGTTTTCTGTACCTTCA +
Preference number: 2 (lower is better)
Translates to: RHRMGLLEHRARGAPGCPILKRP*RFSVPS
Trigger: TGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTAT...TGGACAGCCAGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTGGCAGGCAGATCACCTaGGGTCAGGAGTTTGAGACA +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSGRQIT*GQEFET
Trigger: TGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCC...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR GCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACCCCGGAAGTGGAGGTTaGAGTGAGCCGAGAATGTGC +
Preference number: 2 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNPGSGG*SEPRMC
Trigger: GCACATTCTCGGCTCACTGCAACCTCCACTTCCGGG...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCTCAGCCTCCCAAAGTaGAGGGGTTACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSLSLPK*RGYRCE
Trigger: CTCACACCTGTAACCCCTGCACTTTGGGAGGCTGAG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR GCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTAGGGTCATCTTCCAGTaGAAGCACCAGCACCGGGTG +
Preference number: 2 (lower is better)
Translates to: SSSDISLGSTKTERRSEIRVIFQ*KHQHRV
Trigger: CACCCGGTGCTGGTGCTTGCACTGGAAGATGACCCT...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR-3UTR CCA 90 bp TATTTGTGCCTCACAAGAATACAAAGTAGAGACTCCAGCCTGCTCTTGCTTCTCCCCCAGGCACGTAGGTaGGACATCCCAGCTACCACC +
Preference number: 2 (lower is better)
Translates to: YLCLTRIQSRDSSLLLLLPQARR*DIPATT
Trigger: GGTGGTAGCTGGGATGTCCCACCTACGTGCCTGGGG...GAGAAGCAAGAGCAGGCTGGAGTCTCTACTTTGTATTCTTGTGAGGCACAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR-3UTR TCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACGGCAGGCAGATCACCTaGGGTCAGGAGTTTGAGACA +
Preference number: 2 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNGRQIT*GQEFET
Trigger: TGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCC...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTTGCCCAGGCTGGTCTTaGACTAATGGGCTCAACCAA +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSCPGWS*TNGLNQ
Trigger: TTGGTTGAGCCCATTAGTTCAAGACCAGCCTGGGCA...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTACTGCCTCAGCCTCCTaGGTAGCTGAGATTAGAGGT +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSTASAS*VAEIRG
Trigger: ACCTCTAATCTCAGCTACTCAGGAGGCTGAGGCAGT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR TCA 90 bp CAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGACAAGCTTCTCAGGAGGCTaGGGCAGGAGAATCTCTTTA +
Preference number: 2 (lower is better)
Translates to: QVEKEAAVLCVAWPVAATSFSGG*GRRISL
Trigger: TAAAGAGATTCTCCTGCCTCAGCCTCCTGAGAAGCT...TGTCGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR-3UTR TCA 90 bp AGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATAGCTTCTCAGGAGGCTaGGGCAGGAGAATCTCTTTA +
Preference number: 2 (lower is better)
Translates to: SLHQGTTLIQWHHPNLFHSFSGG*GRRISL
Trigger: TAAAGAGATTCTCCTGCCTCAGCCTCCTGAGAAGCT...ATGAAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTACAGGTGTGAGGCACTaGACCAGCCCCACATTACAA +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSTGVRH*TSPTLQ
Trigger: TTGTAATGTGGGGCTGGTGCAGTGCCTCACACCTGT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CCA 90 bp AAAGGGTGCTGGCGAAGCAGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGATTTGAAGAGTAGTTaGTGTGTCTCCCATACTGTG +
Preference number: 2 (lower is better)
Translates to: KGCWRSRHRMGLLEHRARDLKSS*CVSHTV
Trigger: CACAGTATGGGAGACACACCAACTACTCTTCAAATC...TCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCAGCACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR CCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCACAGCTCAGTCTCCTaGGGACTACATGCCTGTAGT +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSHSSVS*GLHACS
Trigger: ACTACAGGCATGTAGTCCCCAGGAGACTGAGCTGTG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR CAA 90 bp TCTGGAGAAAAGCAAGTCTGCTGGGGCTCCAGGGCTGAGCATATTTaGGGAAGTTCATCAATTGGTTCCTGTAGTCCCAGCTACTTGGGA +
Preference number: 2 (lower is better)
Translates to: SGEKQVCWGSRAEHI*GSSSIGSCSPSYLG
Trigger: TCCCAAGTAGCTGGGACTACAGGAACCAATTGATGAACTTCCCAAAATATGCTCAGCCCTGGAGCCCCAGCAGACTTGCTTTTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR CAA 90 bp AGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGACATCAGCTaGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGTAATGGAA +
Preference number: 2 (lower is better)
Translates to: SSSSVCSVASSSDIS*GSTKTERRSEIVME
Trigger: TTCCATTACAATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCACGCTACACACAGAACTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CAA 90 bp CCTGTTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTaGGTGAAAAACAACTGTCCAGACAAGACATCTGCTGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: PVSSTVSGTTQSWSS*VKNNCPDKTSAAAG
Trigger: GCCTGCAGCAGCAGATGTCTTGTCTGGACAGTTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR TCA 90 bp ACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGCGTAGAGCAGGTACGCACAAAGGCACCAAATACTaGAAAGGCCGTGGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: TEKAVEVFCTFTRRAGTHKGTKY*KGRGGF
Trigger: AAAACCTCCACGGCCTTTTCAGTATTTGGTGCCTTT...GTGCGTACCTGCTCTACGCGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTAGACTCCCGAGTAGTTaGGACTACAGGTATGTGCCA +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSRLPSS*DYRYVP
Trigger: TGGCACATACCTGTAGTCTCAACTACTCGGGAGTCT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCTTGTGAAAAGCCACTaGAGTCCAGCCTGGACAACA +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSLVKSH*SPAWTT
Trigger: TGTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTGAGATTAGAGGTGCTTaGCACCATGCCTGGCTAACT +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSEIRGA*HHAWLT
Trigger: AGTTAGCCAGGCATGGTGGCAAGCACCTCTAATCTC...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR GCA 90 bp GAGCTGATGTCCATGAACCAATTGTTGTTCTTTCATCTGCTGAAAACGTCCCTCAGGGTCATCTTCCAGTaGAAGCACCAGCACCGGGTG +
Preference number: 2 (lower is better)
Translates to: ELMSMNQLLFFHLLKTSLRVIFQ*KHQHRV
Trigger: CACCCGGTGCTGGTGCTTGCACTGGAAGATGACCCT...GAGGGACGTTTTCAGCAGATGAAAGAACAACAATTGGTTCATGGACATCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR-3UTR CCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACCACAGCTCAGTCTCCTaGGGACTACATGCCTGTAGT +
Preference number: 2 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNHSSVS*GLHACS
Trigger: ACTACAGGCATGTAGTCCCCAGGAGACTGAGCTGTG...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTGCAGACTCGAACTCCTaGGCTCAAGAAATCTTCTGC +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSADSNS*AQEIFC
Trigger: GCAGAAGATTTCTTGAGCCCAGGAGTTCGAGTCTGC...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CCA 90 bp AGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATGGCACAACGCAATCATaGAGCAGCTTGGTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: SLHQGTTLIQWHHPNLFHGTTQS*SSLVKN
Trigger: GTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCC...ATGAAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR GCA 90 bp ATCGAGGCCTGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTGCACACCAGGCTCTAGAATCAACTaGTCAGTCTTTGAGATTTTG +
Preference number: 2 (lower is better)
Translates to: IEACLQTMVVLITVACTPGSRIN*SVFEIL
Trigger: CAAAATCTCAAAGACTGAGCAGTTGATTCTAGAGCC...TGGTGTGCAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACAGGCCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CCA 90 bp CTTCTTATCATTCCTGCCCCTAGTCTTGGGGTGAAGGTGGAGGAGAGGCTTGCAATACTGAAAAGGCCGTaGAGGTTTTCTGTACCTTCA +
Preference number: 2 (lower is better)
Translates to: LLIIPAPSLGVKVEERLAILKRP*RFSVPS
Trigger: TGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTAT...TGCAAGCCTCTCCTCCACCTTCACCCCAAGACTAGGGGCAGGAATGATAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR-3UTR CCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCTGGTCTTGAATTTCTaGCCTCAAGCGATCCTCCTT +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSLVLNF*PQAILL
Trigger: AAGGAGGATCGCTTGAGGCCAGAAATTCAAGACCAG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR CAA 90 bp TGGAGGTTTTCTGTACCTTCACGCGTAGAGCAGGTACGCACTGATTaGAAGAGTAGTTGGTGTGTCTCCCATACTGTGCTGTTCATTGGT +
Preference number: 2 (lower is better)
Translates to: WRFSVPSRVEQVRTD*KSSWCVSHTVLFIG
Trigger: ACCAATGAACAGCACAGTATGGGAGACACACCAACTACTCTTCAAATCAGTGCGTACCTGCTCTACGCGTGAAGGTACAGAAAACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR TCA 90 bp AAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCTGTTCTTTCATCTGCTaGAAACGTCCCTCAAACAGA +
Preference number: 2 (lower is better)
Translates to: KFDLKLAPGYDPDTVASPCSFIC*KRPSNR
Trigger: TCTGTTTGAGGGACGTTTTCAGCAGATGAAAGAACA...GGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR-3UTR GCA 90 bp TTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTGAAAAACAATCCAGACAAGACATCTaGTGCTGCAGGCTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: FIHCFRHNAIMEQLGEKQSRQDI*CCRLLK
Trigger: CTTGAGGAGCCTGCAGCAGCAGATGTCTTGTCTGGA...TTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTAAGGTTTTGCCATGTTaGCCAGGCTGGTTTCAAACT +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSKVLPC*PGWFQT
Trigger: AGTTTGAAACCAGCCTGGCCAACATGGCAAAACCTT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CCA 90 bp TCAGAAAAGGACAGCACTGATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCGCAGCGACATCAGCTTaGGTTCGACCAAAACGGAAC +
Preference number: 2 (lower is better)
Translates to: SEKDSTDEKLIPYCGATVAATSA*VRPKRN
Trigger: GTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGC...GACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTCCTTTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CAA 90 bp CCGGATTCTAGCCTATATTTGTGGGGCCTGGATTCTAGCCTATATTaGTGCCTCACAAGAATACAAAGTAGAGACTCCAGCCTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: PDSSLYLWGLDSSLY*CLTRIQSRDSSLLL
Trigger: CAAGAGCAGGCTGGAGTCTCTACTTTGTATTCTTGTGAGGCACAAATATAGGCTAGAATCCAGGCCCCACAAATATAGGCTAGAATCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR-3UTR TCA 90 bp AGGTTTTCTGTACCTTCACGCGTAGAGCAGGTACGCACTGATTTGAAGAGTAGTAAAGGCACCAAATACTaGAAAGGCCGTGGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: RFSVPSRVEQVRTDLKSSKGTKY*KGRGGF
Trigger: AAAACCTCCACGGCCTTTTCAGTATTTGGTGCCTTT...ACTACTCTTCAAATCAGTGCGTACCTGCTCTACGCGTGAAGGTACAGAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR CCA 90 bp CAGGCTGACATTATCTCCCACTTGGAGAAACCCTATTCTGGTTTCCGGATCTCTGATTTGAAGAGTAGTTaGTGTGTCTCCCATACTGTG +
Preference number: 2 (lower is better)
Translates to: QADIISHLEKPYSGFRISDLKSS*CVSHTV
Trigger: CACAGTATGGGAGACACACCAACTACTCTTCAAATC...AGAGATCCGGAAACCAGAATAGGGTTTCTCCAAGTGGGAGATAATGTCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CCA 90 bp TCAGAAAAGGACAGCACTGATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCGGCACAACGCAATCATaGAGCAGCTTGGTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: SEKDSTDEKLIPYCGATVGTTQS*SSLVKN
Trigger: GTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCC...GACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTCCTTTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTTCTTCCAGATTCTTCTaGGTTAACATGTTGAGATGT +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSSSRFF*VNMLRC
Trigger: ACATCTCAACATGTTAACCCAGAAGAATCTGGAAGA...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CCA 90 bp TATTTGTGCCTCACAAGAATACAAAGTAGAGACTCCAGCCTGCTCTTGCTTCTCATACTGAAAAGGCCGTaGAGGTTTTCTGTACCTTCA +
Preference number: 2 (lower is better)
Translates to: YLCLTRIQSRDSSLLLLLILKRP*RFSVPS
Trigger: TGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTAT...GAGAAGCAAGAGCAGGCTGGAGTCTCTACTTTGTATTCTTGTGAGGCACAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR-3UTR CCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACTCTTCCAGATTCTTCTaGGTTAACATGTTGAGATGT +
Preference number: 2 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNSSRFF*VNMLRC
Trigger: ACATCTCAACATGTTAACCCAGAAGAATCTGGAAGA...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTAATACAAAAATTAGCTaGGCTTTACATAAAACCGGG +
Preference number: 2 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSNTKIS*ALHKTG
Trigger: CCCGGTTTTATGTAAAGCCCAGCTAATTTTTGTATT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CCA 90 bp TCAGAAAAGGACAGCACTGATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCCAAACTCTTACCGTATaGGCGCAGAAGGAAAATTTG +
Preference number: 2 (lower is better)
Translates to: SEKDSTDEKLIPYCGATVQTLTV*AQKENL
Trigger: CAAATTTTCCTTCTGCGCCCATACGGTAAGAGTTTG...GACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTCCTTTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACAATACAAAAATTAGCTaGGCTTTACATAAAACCGGG +
Preference number: 2 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNNTKIS*ALHKTG
Trigger: CCCGGTTTTATGTAAAGCCCAGCTAATTTTTGTATT...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR TCA 90 bp TATAAGAGAACCAAGGAACCACTGAACTTTGAGAACACAACCGAAATGCTAACTTTAGTGGGCAGACCTTaGTTGACTATAGAAATTCAG +
Preference number: 2 (lower is better)
Translates to: YKRTKEPLNFENTTEMLTLVGRP*LTIEIQ
Trigger: CTGAATTTCTATAGTCAATCAAGGTCTGCCCACTAA...AGTTAGCATTTCGGTTGTGTTCTCAAAGTTCAGTGGTTCCTTGGTTCTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CAA 90 bp TATTTTTGCAATTTCTCATTAAATCAGGCTGACATTATCTCCCACTaGGAGAAACCCTATTCTGGTTTCCGGATCTCTAAAAGTATTTCA +
Preference number: 2 (lower is better)
Translates to: YFCNFSLNQADIISH*EKPYSGFRISKSIS
Trigger: TGAAATACTTTTAGAGATCCGGAAACCAGAATAGGGTTTCTCCAAGTGGGAGATAATGTCAGCCTGATTTAATGAGAAATTGCAAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CAA 90 bp CATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTGGCTGTCCAGGCATACTGTGCTGTTCATaGGTGCCCTCCCCTGGCTAT +
Preference number: 3 (lower is better)
Translates to: HRMGLLEHRARGAPGCPGILCCS*VPSPGY
Trigger: ATAGCCAGGGGAGGGCACCAATGAACAGCACAGTAT...GCCTGGACAGCCAGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR GCA 72 bp GGGCTGGTGGGCATCTGCCCCATGATGGGGAAAGGGTaGTGGCGAAGCAGACATAGAATGGGCCTTCTAGAG +
Preference number: 3 (lower is better)
Translates to: GLVGICPMMGKG*WRSRHRMGLLE
Trigger: CTCTAGAAGGCCCATTCTATGTCTGCTTCGCCAGCACCCTTTCCCCATCATGGGGCAGATGCCCACCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR CCA 72 bp CTGGTGGGCATCTGCCCCATGATGGGGAAAGGGTGCTaGCGAAGCAGACATAGAATGGGCCTTCTAGAGCAC +
Preference number: 3 (lower is better)
Translates to: LVGICPMMGKGC*RSRHRMGLLEH
Trigger: GTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCAGCACCCTTTCCCCATCATGGGGCAGATGCCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR CCA 72 bp CCAGCCTGCTCTTGCTTCTCTCCCCAGGCACGTAGGTaGGACATCCCAGCTACCACCCAGCCTTCTTATCAT +
Preference number: 3 (lower is better)
Translates to: PACSCFSPQARR*DIPATTQPSYH
Trigger: ATGATAAGAAGGCTGGGTGGTAGCTGGGATGTCCCACCTACGTGCCTGGGGAGAGAAGCAAGAGCAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR CCA 72 bp GTCTCCCATACTGTGCTGTTCATTGGTGCCCTCCCCTaGCTATTCAGTAGATGGGGGTGGTGGAGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: VSHTVLFIGALP*LFSRWGWWRQL
Trigger: GAGCTGCCTCCACCACCCCCATCTACTGAATAGCCAGGGGAGGGCACCAATGAACAGCACAGTATGGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR GCA 72 bp AAACGTCCCTCAAACAGAAGTAGGGTCATCTTCCAGTaGAAGCACCAGCACCGGGTGTGGTGGCGGATCCCT +
Preference number: 3 (lower is better)
Translates to: KRPSNRSRVIFQ*KHQHRVWWRIP
Trigger: AGGGATCCGCCACCACACCCGGTGCTGGTGCTTGCACTGGAAGATGACCCTACTTCTGTTTGAGGGACGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR-3UTR CAA 90 bp GCCCCTGGCTGTCCAGGCCTGAAGGCAGTACTGCTGCATTCCAGTCTAGCCCAACAGGTACGCACTGATTaGAAGAGTAGTTGGTGTGTC +
Preference number: 3 (lower is better)
Translates to: APGCPGLKAVLLHSSLAQQVRTD*KSSWCV
Trigger: GACACACCAACTACTCTTCAAATCAGTGCGTACCTG...TTGGGCTAGACTGGAATGCAGCAGTACTGCCTTCAGGCCTGGACAGCCAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR TCA 72 bp GGAGAATCGCTTGAACCCCGGAAGTGGAGGTTGCAGTaGGCCGAGAATGTGCCAGGTGACACAGCTAGACTA +
Preference number: 3 (lower is better)
Translates to: GESLEPRKWRLQ*AENVPGDTARL
Trigger: TAGTCTAGCTGTGTCACCTGGCACATTCTCGGCTCACTGCAACCTCCACTTCCGGGGTTCAAGCGATTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR CCA 72 bp TGTTGCCTGCACACCATCATTCTCCAGGAAGCACCATaGCAGATGCTGGCGGAGTCACAGAGAGTGCACACA +
Preference number: 3 (lower is better)
Translates to: CCLHTIILQEAP*QMLAESQRVHT
Trigger: TGTGTGCACTCTCTGTGACTCCGCCAGCATCTGCCATGGTGCTTCCTGGAGAATGATGGTGTGCAGGCAACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CAA 90 bp GGCCTGATCGAGGCCTGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTGCCAGGTACGCACTGATTaGAAGAGTAGTTGGTGTGTC +
Preference number: 3 (lower is better)
Translates to: GLIEACLQTMVVLITVACQVRTD*KSSWCV
Trigger: GACACACCAACTACTCTTCAAATCAGTGCGTACCTG...GCAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACAGGCCTCGATCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CAA 90 bp GATGCTGGCGGAGTCACAGAGAGTGCACACAGCATTGATGCCCTTCCTATGTCCCAAGGTCTCGCTCTGTaGCCAGATTGGAGTGCAGTA +
Preference number: 3 (lower is better)
Translates to: DAGGVTESAHSIDALPMSQGLAL*PDWSAV
Trigger: TACTGCACTCCAATCTGGCAACAGAGCGAGACCTTG...GGACATAGGAAGGGCATCAATGCTGTGTGCACTCTCTGTGACTCCGCCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR-3UTR CAA 90 bp CTGATCGAGGCCTGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTGCACAAGAGTGCACACAGCATaGATGCCCTTCCTATGTCCC +
Preference number: 3 (lower is better)
Translates to: LIEACLQTMVVLITVACTRVHTA*MPFLCP
Trigger: GGGACATAGGAAGGGCATCAATGCTGTGTGCACTCT...TGTGCAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACAGGCCTCGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR GCA 72 bp GTGGAGCTACTGTCTGACACGCTCCTATCTGCTTTCTaGTGGGTCTCACAAACTCCTGTCCCTTTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: VELLSDTLLSAF*WVSQTPVPFQA
Trigger: AGCCTGGAAAGGGACAGGAGTTTGTGAGACCCAGCAGAAAGCAGATAGGAGCGTGTCAGACAGTAGCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CCA 72 bp AACTCCTGTCCCTTTCCAGGCTGGATTGATGTCACCTaGGATGCTGGTGGCTCAAACTCTTACCGTATGGGC +
Preference number: 3 (lower is better)
Translates to: NSCPFPGWIDVT*DAGGSNSYRMG
Trigger: GCCCATACGGTAAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAGGGACAGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp TGGCGAAGCAGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTAGGGCTGAGCATATTTaGGGAAGTTCATCAATTGGT +
Preference number: 3 (lower is better)
Translates to: WRSRHRMGLLEHRARGAPRAEHI*GSSSIG
Trigger: ACCAATTGATGAACTTCCCAAAATATGCTCAGCCCT...AGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR-3UTR CAA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTAGGCAGGAGAATCGCTaGAACCCCGGAAGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSRQENR*NPGSGG
Trigger: ACCTCCACTTCCGGGGTTCAAGCGATTCTCCTGCCT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR TCA 72 bp AGATGCTGGCGGAGTCACAGAGAGTGCACACAGCATTaGTGCCCTTCCTATGTCCCACCCTCAACTGCAATA +
Preference number: 3 (lower is better)
Translates to: RCWRSHRECTQH*CPSYVPPSTAI
Trigger: TATTGCAGTTGAGGGTGGGACATAGGAAGGGCATCAATGCTGTGTGCACTCTCTGTGACTCCGCCAGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR GCA 72 bp TCACAAGAATACAAAGTAGAGACTCCAGCCTGCTCTTaGTTCTCTCCCCAGGCACGTAGGTGGGACATCCCA +
Preference number: 3 (lower is better)
Translates to: SQEYKVETPACS*FSPQARRWDIP
Trigger: TGGGATGTCCCACCTACGTGCCTGGGGAGAGAAGCAAGAGCAGGCTGGAGTCTCTACTTTGTATTCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR GCA 72 bp TGTCTGCAAACCATGGTGGTGCTGATCACTGTTGCCTaGACACCATCATTCTCCAGGAAGCACCATGGCAGA +
Preference number: 3 (lower is better)
Translates to: CLQTMVVLITVA*TPSFSRKHHGR
Trigger: TCTGCCATGGTGCTTCCTGGAGAATGATGGTGTGCAGGCAACAGTGATCAGCACCACCATGGTTTGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR CCA 72 bp CTGTGTGTAGCGTGGCCAGTAGCAGCGACATCAGCTTaGGTTCGACCAAAACGGAACGGAGATCAGAAATTG +
Preference number: 3 (lower is better)
Translates to: LCVAWPVAATSA*VRPKRNGDQKL
Trigger: CAATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCACGCTACACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTTTGCCCAGGCTGGTCTaGAATTTCTGGCCTCAAGCG +
Preference number: 3 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSLPRLV*NFWPQA
Trigger: CGCTTGAGGCCAGAAATTCAAGACCAGCCTGGGCAA...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CAA 90 bp AATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAGCAGCGACATCAGCTaGGGTTCGACCAAAACGGAA +
Preference number: 3 (lower is better)
Translates to: NLTSSLHQGTTLIQWHHPSSDIS*GSTKTE
Trigger: TTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCT...TGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp CCAAATACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGCGTAGAGCAGGTATACTGTGCTGTTCATaGGTGCCCTCCCCTGGCTAT +
Preference number: 3 (lower is better)
Translates to: PNTEKAVEVFCTFTRRAGILCCS*VPSPGY
Trigger: ATAGCCAGGGGAGGGCACCAATGAACAGCACAGTAT...ACCTGCTCTACGCGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR CAA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTGCTGAGGCAGGAGAATaGCTTAAACCCAGAGGTGGA +
Preference number: 3 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSAEAGE*LKPRGG
Trigger: TCCACCTCTGGGTTTAAGCAATTCTCCTGCCTCAGC...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR CCA 72 bp CGCGTAGAGCAGGTACGCACTGATTTGAAGAGTAGTTaGTGTGTCTCCCATACTGTGCTGTTCATTGGTGCC +
Preference number: 3 (lower is better)
Translates to: RVEQVRTDLKSS*CVSHTVLFIGA
Trigger: GGCACCAATGAACAGCACAGTATGGGAGACACACCAACTACTCTTCAAATCAGTGCGTACCTGCTCTACGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR CAA 90 bp GGGGTGGTGGAGGCAGCTCCTTTGAATGATGAACTGTCTGGAGAAAAGCAAGTCTGGGAAGTTCATCAATaGGTTCCTGTAGTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: GVVEAAPLNDELSGEKQVWEVHQ*VPVVPA
Trigger: AGCTGGGACTACAGGAACCAATTGATGAACTTCCCA...GACTTGCTTTTCTCCAGACAGTTCATCATTCAAAGGAGCTGCCTCCACCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR-3UTR CAA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACGCTGAGGCAGGAGAATaGCTTAAACCCAGAGGTGGA +
Preference number: 3 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNAEAGE*LKPRGG
Trigger: TCCACCTCTGGGTTTAAGCAATTCTCCTGCCTCAGC...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CAA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCAAGGTTTTGCCATGTaGGCCAGGCTGGTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSQGFAM*ARLVSN
Trigger: GTTTGAAACCAGCCTGGCCAACATGGCAAAACCTTG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
3UTR-3UTR CAA 90 bp GTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAATGTCCATGAACCAATaGTTGTTCTTTCATCTGCTG +
Preference number: 3 (lower is better)
Translates to: VASSSDISLGSTKTERRSMSMNQ*LFFHLL
Trigger: CAGCAGATGAAAGAACAACAATTGGTTCATGGACAT...TGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp AAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCCAATCATGGAGCAGCTaGGTGAAAAACAACTGTCCA +
Preference number: 3 (lower is better)
Translates to: KFDLKLAPGYDPDTVASPQSWSS*VKNNCP
Trigger: TGGACAGTTGTTTTTCACCAAGCTGCTCCATGATTG...GGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR TCA 72 bp GATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCTaGCACGCTCCTATCTGCTTTCTGCTGGGTCTCACA +
Preference number: 3 (lower is better)
Translates to: DEKLIPYCGATV*HAPICFLLGLT
Trigger: TGTGAGACCCAGCAGAAAGCAGATAGGAGCGTGTCAGACAGTAGCTCCACAATATGGGATCAGCTTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp TCTTTAAAGGCACCAAATACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGATACTGTGCTGTTCATaGGTGCCCTCCCCTGGCTAT +
Preference number: 3 (lower is better)
Translates to: SLKAPNTEKAVEVFCTFTILCCS*VPSPGY
Trigger: ATAGCCAGGGGAGGGCACCAATGAACAGCACAGTAT...CGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTATTTGGTGCCTTTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
3UTR-3UTR CAA 90 bp GTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCATCCATGAACCAATTGTaGTTCTTTCATCTGCTGAAA +
Preference number: 3 (lower is better)
Translates to: VASSSDISLGSTKTERRSSMNQL*FFHLLK
Trigger: TTTCAGCAGATGAAAGAACAACAATTGGTTCATGGA...TGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp GGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTACCGTATGGGCTCCATGAACCAATTGTaGTTCTTTCATCTGCTGAAA +
Preference number: 3 (lower is better)
Translates to: GWIDVTWDAGGSNSYRMGSMNQL*FFHLLK
Trigger: TTTCAGCAGATGAAAGAACAACAATTGGTTCATGGA...GCCCATACGGTAAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp GTCCCTTTCCAGGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTATGTCCATGAACCAATaGTTGTTCTTTCATCTGCTG +
Preference number: 3 (lower is better)
Translates to: VPFQAGLMSPGMLVAQTLMSMNQ*LFFHLL
Trigger: CAGCAGATGAAAGAACAACAATTGGTTCATGGACAT...AAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp GACAAGACATCTGCTGCTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTTCCATGAACCAATTGTaGTTCTTTCATCTGCTGAAA +
Preference number: 3 (lower is better)
Translates to: DKTSAAAGSSSRKGSSSSSMNQL*FFHLLK
Trigger: TTTCAGCAGATGAAAGAACAACAATTGGTTCATGGA...AGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAGCAGCAGATGTCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp AAGGAAAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATATGTCCATGAACCAATaGTTGTTCTTTCATCTGCTG +
Preference number: 3 (lower is better)
Translates to: KENLTSSLHQGTTLIQWHMSMNQ*LFFHLL
Trigger: CAGCAGATGAAAGAACAACAATTGGTTCATGGACAT...ATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR-3UTR CAA 90 bp TATAAGAGAACCAAGGAACCACTGAACTTTGAGAACACAACCGAAATGCTAACTAGCAGCGACATCAGCTaGGGTTCGACCAAAACGGAA +
Preference number: 3 (lower is better)
Translates to: YKRTKEPLNFENTTEMLTSSDIS*GSTKTE
Trigger: TTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCT...AGTTAGCATTTCGGTTGTGTTCTCAAAGTTCAGTGGTTCCTTGGTTCTCTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR TCA 72 bp ATAGAAATTCAGAAAAGGACAGCACTGATGAAAAGCTaGTCCCATATTGTGGAGCTACTGTCTGACACGCTC +
Preference number: 3 (lower is better)
Translates to: IEIQKRTALMKS*SHIVELLSDTL
Trigger: GAGCGTGTCAGACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTCCTTTTCTGAATTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CCA 72 bp AAAACATTCCGGATTCTAGCCTATATTTGTGGGGCCTaGATTCTAGCCTATATTTGTGCCTCACAAGAATAC +
Preference number: 3 (lower is better)
Translates to: KTFRILAYICGA*ILAYICASQEY
Trigger: GTATTCTTGTGAGGCACAAATATAGGCTAGAATCCAGGCCCCACAAATATAGGCTAGAATCCGGAATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR CCA 72 bp AATCAAGAAAACATTCCGGATTCTAGCCTATATTTGTaGGGCCTGGATTCTAGCCTATATTTGTGCCTCACA +
Preference number: 3 (lower is better)
Translates to: NQENIPDSSLYL*GLDSSLYLCLT
Trigger: TGTGAGGCACAAATATAGGCTAGAATCCAGGCCCCACAAATATAGGCTAGAATCCGGAATGTTTTCTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
CDS-3UTR TCA 90 bp CATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTGGCTGTCCAGGCTGGGCATCTGCCCCATaGTGGGGAAAGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HRMGLLEHRARGAPGCPGWASAP*WGKGAG
Trigger: GCCAGCACCCTTTCCCCATCATGGGGCAGATGCCCA...GCCTGGACAGCCAGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CCA 90 bp AGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTGGCTGTCCAAGGGATGGCTGTAACTaGAACCTGTGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RHRMGLLEHRARGAPGCPRDGCN*NLCCSG
Trigger: ACCTGAGCAGCACAGGTTCCAGTTACAGCCATCCCT...TGGACAGCCAGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTGGTGGGAGGAGCACCTaGGCCCAGGAGGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSGGRST*AQEVQA
Trigger: AGCCTGTACCTCCTGGGCTCAGGTGCTCCTCCCACC...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR GCA 90 bp ACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGAGGGTCATCTTCCAGTaGAAGCACCAGCACCGGGTG +
Preference number: 4 (lower is better)
Translates to: TSSLHQGTTLIQWHHPNLRVIFQ*KHQHRV
Trigger: CACCCGGTGCTGGTGCTTGCACTGGAAGATGACCCT...CAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
CDS-3UTR TCA 90 bp ACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGACCAGGGTACGACCCTaGTACAGTGGCATCACCCAA +
Preference number: 4 (lower is better)
Translates to: TSSLHQGTTLIQWHHPNLTRVRP*YSGITQ
Trigger: TTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGT...CAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR GCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACGCTGGGTGGAGGGGGTaGGCACCTGTGGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNAGWRG*APVVPV
Trigger: AACTGGGACCACAGGTGCGCACCCCCTCCACCCAGC...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CCA 90 bp ACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGCGTAGAGCAGGTACGCACATTGGTGCCCTCCCCTaGCTATTCAGTAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TEKAVEVFCTFTRRAGTHIGALP*LFSRWG
Trigger: CCCCCATCTACTGAATAGCCAGGGGAGGGCACCAAT...GTGCGTACCTGCTCTACGCGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CCA 90 bp AAAGGGTGCTGGCGAAGCAGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGATACTGTGCTGTTCATTaGTGCCCTCCCCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: KGCWRSRHRMGLLEHRARYCAVH*CPPLAI
Trigger: AATAGCCAGGGGAGGGCACCAATGAACAGCACAGTA...TCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCAGCACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CCA 90 bp GGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTACCGTATGGGCAGGGATGGCTGTAACTaGAACCTGTGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GWIDVTWDAGGSNSYRMGRDGCN*NLCCSG
Trigger: ACCTGAGCAGCACAGGTTCCAGTTACAGCCATCCCT...GCCCATACGGTAAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp ACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGAGGGATGGCTGTAACTaGAACCTGTGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TSSLHQGTTLIQWHHPNLRDGCN*NLCCSG
Trigger: ACCTGAGCAGCACAGGTTCCAGTTACAGCCATCCCT...CAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTCAGCACCGGGTGTGGTaGCGGATCCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SSSDISLGSTKTERRSEIQHRVW*RIPVVP
Trigger: TGGGACTACAGGGATCCGCCACCACACCCGGTGCTG...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
CDS-3UTR CCA 90 bp TGTGTAGCGTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGCAGCGACATCAGCTTaGGTTCGACCAAAACGGAAC +
Preference number: 4 (lower is better)
Translates to: CVAWPVAATSAWVRPKRNAATSA*VRPKRN
Trigger: GTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGC...GTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCACGCTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTACCGTATGGGCGTTCTGTGTGTAGCGTaGCCAGTAGCAGCGACATCA +
Preference number: 4 (lower is better)
Translates to: GWIDVTWDAGGSNSYRMGVLCVA*PVAATS
Trigger: TGATGTCGCTGCTACTGGCCACGCTACACACAGAAC...GCCCATACGGTAAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp AGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATACCAGGGTACGACCCTaGTACAGTGGCATCACCCAA +
Preference number: 4 (lower is better)
Translates to: SLHQGTTLIQWHHPNLFHTRVRP*YSGITQ
Trigger: TTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGT...ATGAAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp AGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATCTTTCCAGGCTGGATTaGTGTCACCTGGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SLHQGTTLIQWHHPNLFHLSRLD*CHLGCW
Trigger: CCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAG...ATGAAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp GTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCATGTGGAGCTACTGTCTaGCACGCTCCTATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VASSSDISLGSTKTERRSCGATV*HAPICF
Trigger: AAAGCAGATAGGAGCGTGTCAGACAGTAGCTCCACA...TGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR GCA 90 bp TTAAAGGCACCAAATACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGCGTGGGCTGGTGGGCATCTaGCCCATGATGGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LKAPNTEKAVEVFCTFTRGLVGI*PMMGKG
Trigger: CCCTTTCCCCATCATGGGGCAGATGCCCACCAGCCC...ACGCGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTATTTGGTGCCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR GCA 90 bp CTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCATCCAGACAAGACATCTaGTGCTGCAGGCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LQAPQVEKEAAVLCVAWPSRQDI*CCRLLK
Trigger: CTTGAGGAGCCTGCAGCAGCAGATGTCTTGTCTGGA...TGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GTCCCTTTCCAGGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTGCAGCGACATCAGCTTaGGTTCGACCAAAACGGAAC +
Preference number: 4 (lower is better)
Translates to: VPFQAGLMSPGMLVAQTLAATSA*VRPKRN
Trigger: GTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGC...AAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGCTGATCCCATATTGTaGAGCTACTGTCTGACACGC +
Preference number: 4 (lower is better)
Translates to: VASSSDISLGSTKTERRSADPIL*SYCLTR
Trigger: GCGTGTCAGACAGTAGCTCCACAATATGGGATCAGC...TGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp TGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGGCTGATCCCATATTGTaGAGCTACTGTCTGACACGC +
Preference number: 4 (lower is better)
Translates to: WPVAATSAWVRPKRNGDQADPIL*SYCLTR
Trigger: GCGTGTCAGACAGTAGCTCCACAATATGGGATCAGC...CTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CAA 72 bp AGAGTAGTTGGTGTGTCTCCCATACTGTGCTGTTCATaGGTGCCCTCCCCTGGCTATTCAGTAGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: RVVGVSPILCCS*VPSPGYSVDGG
Trigger: ACCCCCATCTACTGAATAGCCAGGGGAGGGCACCAATGAACAGCACAGTATGGGAGACACACCAACTACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR TCA 90 bp AAGCAAGTCTGCTGGGGCTCCAGGGCTGAGCATATTTTGGGAAGTTCATCAATTCTGGCTGTCCAGGCCTaGAGGCAGTACTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: KQVCWGSRAEHILGSSSILAVQA*RQYCCI
Trigger: AATGCAGCAGTACTGCCTTCAGGCCTGGACAGCCAG...AATTGATGAACTTCCCAAAATATGCTCAGCCCTGGAGCCCCAGCAGACTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTTGCCCAGGCTGGTCTTaGATTTCTGGCCTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSCPGWS*ISGLKR
Trigger: TCGCTTGAGGCCAGAAATTCAAGACCAGCCTGGGCA...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR TCA 90 bp CTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCACGCAGAAGGAAAATTTaGCCTCAAGCTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LQAPQVEKEAAVLCVAWPRRRKI*PQACTR
Trigger: CCTGGTGCAAGCTTGAGGTCAAATTTTCCTTCTGCG...TGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp GTCCCTTTCCAGGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTCGCAGAAGGAAAATTTaGCCTCAAGCTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: VPFQAGLMSPGMLVAQTLRRRKI*PQACTR
Trigger: CCTGGTGCAAGCTTGAGGTCAAATTTTCCTTCTGCG...AAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGCGCAGAAGGAAAATTTaGCCTCAAGCTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PQVEKEAAVLCVAWPVAARRRKI*PQACTR
Trigger: CCTGGTGCAAGCTTGAGGTCAAATTTTCCTTCTGCG...CGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGTGTGGAGCTACTGTCTaGCACGCTCCTATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PQVEKEAAVLCVAWPVAACGATV*HAPICF
Trigger: AAAGCAGATAGGAGCGTGTCAGACAGTAGCTCCACA...CGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp TGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGGAACCAAGGAACCACTaGACTTTGAGAACACAACCG +
Preference number: 4 (lower is better)
Translates to: WPVAATSAWVRPKRNGDQEPRNH*TLRTQP
Trigger: CGGTTGTGTTCTCAAAGTTCAGTGGTTCCTTGGTTC...CTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGGGATGGGTGTGTATGTaGTCTTGGGCCCCTTTTATG +
Preference number: 4 (lower is better)
Translates to: PQVEKEAAVLCVAWPVAAGWVCM*SWAPFM
Trigger: CATAAAAGGGGCCCAAGATCACATACACACCCATCC...CGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673317.1
CDS-3UTR GCA 90 bp AATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCATCCAGACAAGACATCTaGTGCTGCAGGCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: NLTSSLHQGTTLIQWHHPSRQDI*CCRLLK
Trigger: CTTGAGGAGCCTGCAGCAGCAGATGTCTTGTCTGGA...TGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR GCA 90 bp CAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGACATCCAGACAAGACATCTaGTGCTGCAGGCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QVEKEAAVLCVAWPVAATSRQDI*CCRLLK
Trigger: CTTGAGGAGCCTGCAGCAGCAGATGTCTTGTCTGGA...TGTCGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR GCA 90 bp TGTGTAGCGTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACCTCCTATCTGCTTTCTaGTGGGTCTCACAAACTCCT +
Preference number: 4 (lower is better)
Translates to: CVAWPVAATSAWVRPKRNLLSAF*WVSQTP
Trigger: AGGAGTTTGTGAGACCCAGCAGAAAGCAGATAGGAG...GTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCACGCTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp ACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGCGTAGAGCAGGTACGCACATGGGGAAAGGGTGCTaGCGAAGCAGACATAGAATG +
Preference number: 4 (lower is better)
Translates to: TEKAVEVFCTFTRRAGTHMGKGC*RSRHRM
Trigger: CATTCTATGTCTGCTTCGCCAGCACCCTTTCCCCAT...GTGCGTACCTGCTCTACGCGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CCA 90 bp AATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAGTTCTGTGTGTAGCGTaGCCAGTAGCAGCGACATCA +
Preference number: 4 (lower is better)
Translates to: NLTSSLHQGTTLIQWHHPVLCVA*PVAATS
Trigger: TGATGTCGCTGCTACTGGCCACGCTACACACAGAAC...TGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTGGCAGATGGATCATGTaGCTGCAGGAATTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSGRWIM*LQEFET
Trigger: GGTCTCGAATTCCTGCAGTCACATGATCCATCTGCC...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR TCA 90 bp AATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAGCTTCTCAGGAGGCTaGGGCAGGAGAATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: NLTSSLHQGTTLIQWHHPSFSGG*GRRISL
Trigger: TAAAGAGATTCTCCTGCCTCAGCCTCCTGAGAAGCT...TGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
CDS-3UTR TCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTCTTTCCAGGCTGGATTaGTGTCACCTGGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSDISLGSTKTERRSEILSRLD*CHLGCW
Trigger: CCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAG...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGACATGTGGAGCTACTGTCTaGCACGCTCCTATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QVEKEAAVLCVAWPVAATCGATV*HAPICF
Trigger: AAAGCAGATAGGAGCGTGTCAGACAGTAGCTCCACA...TGTCGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp AATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAGGATGGGTGTGTATGTaGTCTTGGGCCCCTTTTATG +
Preference number: 4 (lower is better)
Translates to: NLTSSLHQGTTLIQWHHPGWVCM*SWAPFM
Trigger: CATAAAAGGGGCCCAAGATCACATACACACCCATCC...TGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673317.1
CDS-3UTR GCA 90 bp ACTGATTTGAAGAGTAGTTGGTGTGTCTCCCATACTGTGCTGTTCATTGGTGCCGGAGAAAAGCAAGTCTaGTGGGGCTCCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TDLKSSWCVSHTVLFIGAGEKQV*WGSRAE
Trigger: CTCAGCCCTGGAGCCCCAGCAGACTTGCTTTTCTCC...GGCACCAATGAACAGCACAGTATGGGAGACACACCAACTACTCTTCAAATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR GCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACCTCAGCCTCCCAAAGTaGAGGGGTTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNLSLPK*RGYRCE
Trigger: CTCACACCTGTAACCCCTGCACTTTGGGAGGCTGAG...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR GCA 90 bp GTCCCTTTCCAGGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTCTCCTATCTGCTTTCTaGTGGGTCTCACAAACTCCT +
Preference number: 4 (lower is better)
Translates to: VPFQAGLMSPGMLVAQTLLLSAF*WVSQTP
Trigger: AGGAGTTTGTGAGACCCAGCAGAAAGCAGATAGGAG...AAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp AAGCAAGTCTGCTGGGGCTCCAGGGCTGAGCATATTTTGGGAAGTTCATCAATTGAAAAGCAAGTCTGCTaGGGCTCCAGGGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KQVCWGSRAEHILGSSSIEKQVC*GSRAEH
Trigger: ATGCTCAGCCCTGGAGCCCCAGCAGACTTGCTTTTC...AATTGATGAACTTCCCAAAATATGCTCAGCCCTGGAGCCCCAGCAGACTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CCA 90 bp CACCCAAACCTGTTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTGCAGCGACATCAGCTTaGGTTCGACCAAAACGGAAC +
Preference number: 4 (lower is better)
Translates to: HPNLFHPLFQAQRNHGAAAATSA*VRPKRN
Trigger: GTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGC...AGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAAACAGGTTTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GTCCCTTTCCAGGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTGGCACAACGCAATCATaGAGCAGCTTGGTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: VPFQAGLMSPGMLVAQTLGTTQS*SSLVKN
Trigger: GTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCC...AAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp CTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAACGACCCTGATACAGTaGCATCACCCAAACCTGTTT +
Preference number: 4 (lower is better)
Translates to: LQAPQVEKEAAVLCVAWPTTLIQ*HHPNLF
Trigger: AAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGT...TGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp AATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCACACCTGGGATGCTGGTaGCTCAAACTCTTACCGTAT +
Preference number: 4 (lower is better)
Translates to: NLTSSLHQGTTLIQWHHPHLGCW*LKLLPY
Trigger: ATACGGTAAGAGTTTGAGCCACCAGCATCCCAGGTG...TGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp CACCCAAACCTGTTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGTCACCTGGGATGCTaGTGGCTCAAACTCTTACCG +
Preference number: 4 (lower is better)
Translates to: HPNLFHPLFQAQRNHGAACHLGC*WLKLLP
Trigger: CGGTAAGAGTTTGAGCCACCAGCATCCCAGGTGACA...AGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAAACAGGTTTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp AGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATTGTCCCTTTCCAGGCTaGATTGATGTCACCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SLHQGTTLIQWHHPNLFHCPFPG*IDVTWD
Trigger: ATCCCAGGTGACATCAATCCAGCCTGGAAAGGGACA...ATGAAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
3UTR CAA 72 bp AAGCAAGTCTGCTGGGGCTCCAGGGCTGAGCATATTTaGGGAAGTTCATCAATTGGTTCCTGTAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KQVCWGSRAEHI*GSSSIGSCSPS
Trigger: GCTGGGACTACAGGAACCAATTGATGAACTTCCCAAAATATGCTCAGCCCTGGAGCCCCAGCAGACTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334725.8
3UTR CAA 72 bp TCTGTGTGTAGCGTGGCCAGTAGCAGCGACATCAGCTaGGGTTCGACCAAAACGGAACGGAGATCAGAAATT +
Preference number: 4 (lower is better)
Translates to: SVCSVASSSDIS*GSTKTERRSEI
Trigger: AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCACGCTACACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp ATGGGGGTGGTGGAGGCAGCTCCTTTGAATGATGAACTGTCTGGAGAAAAGCAATGGAGGCAGCTCCTTTaGATGATGAACTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: MGVVEAAPLNDELSGEKQWRQLL*MMNCLE
Trigger: CTCCAGACAGTTCATCATTCAAAGGAGCTGCCTCCA...TTGCTTTTCTCCAGACAGTTCATCATTCAAAGGAGCTGCCTCCACCACCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR TCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACACTGCCTCAGCCTCCTaGGTAGCTGAGATTAGAGGT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNTASAS*VAEIRG
Trigger: ACCTCTAATCTCAGCTACTCAGGAGGCTGAGGCAGT...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCCCATCTCAGCCTCTTaGGTAGTTAGGAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSPISAS*VVRSTG
Trigger: ACCTGTACTCCTAACTACTCAAGAGGCTGAGATGGG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR TCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACACTCCTGACCTCAAATaGTCTACCCACCTTGGCGTC +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNTPDLK*STHLGV
Trigger: GACGCCAAGGTGGGTAGATCATTTGAGGTCAGGAGT...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR TCA 90 bp GACAAGACATCTGCTGCTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTAGCTTCTCAGGAGGCTaGGGCAGGAGAATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: DKTSAAAGSSSRKGSSSSSFSGG*GRRISL
Trigger: TAAAGAGATTCTCCTGCCTCAGCCTCCTGAGAAGCT...AGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAGCAGCAGATGTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
CDS-3UTR TCA 90 bp GTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCATGTTCTTTCATCTGCTaGAAACGTCCCTCAAACAGA +
Preference number: 4 (lower is better)
Translates to: VASSSDISLGSTKTERRSCSFIC*KRPSNR
Trigger: TCTGTTTGAGGGACGTTTTCAGCAGATGAAAGAACA...TGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp ACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTGTTCTTTCATCTGCTaGAAACGTCCCTCAAACAGA +
Preference number: 4 (lower is better)
Translates to: TSSLHQGTTLIQWHHPNLCSFIC*KRPSNR
Trigger: TCTGTTTGAGGGACGTTTTCAGCAGATGAAAGAACA...CAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGCACTGATGAAAAGCTaGTCCCATATTGTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: LQAPQVEKEAAVLCVAWPALMKS*SHIVEL
Trigger: TAGCTCCACAATATGGGATCAGCTTTTCATCAGTGC...TGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGGCACTGATGAAAAGCTaGTCCCATATTGTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PQVEKEAAVLCVAWPVAAALMKS*SHIVEL
Trigger: TAGCTCCACAATATGGGATCAGCTTTTCATCAGTGC...CGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR GCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACACAGGTGTGAGGCACTaGACCAGCCCCACATTACAA +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNTGVRH*TSPTLQ
Trigger: TTGTAATGTGGGGCTGGTGCAGTGCCTCACACCTGT...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CCA 90 bp GGGCTGAGCATATTTTGGGAAGTTCATCAATTGGTTCCTGTAGTCCCAGCTACTTGGCTATTCAGTAGATaGGGGTGGTGGAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLSIFWEVHQLVPVVPATWLFSR*GWWRQL
Trigger: GAGCTGCCTCCACCACCCCCATCTACTGAATAGCCA...AGTAGCTGGGACTACAGGAACCAATTGATGAACTTCCCAAAATATGCTCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CCA 90 bp CCTGGCTGTCCAGGCCTGAAGGCAGTACTGCTGCATTCCAGTCTAGCCCAAATAGATTTGAAGAGTAGTTaGTGTGTCTCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: PGCPGLKAVLLHSSLAQIDLKSS*CVSHTV
Trigger: CACAGTATGGGAGACACACCAACTACTCTTCAAATC...TATTTGGGCTAGACTGGAATGCAGCAGTACTGCCTTCAGGCCTGGACAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACAGGGATGGCTGTAACTaGAACCTGTGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNRDGCN*NLCCSG
Trigger: ACCTGAGCAGCACAGGTTCCAGTTACAGCCATCCCT...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTAATACAAAAATTAGCTaGGTGGAGGGGGTGCGCACC +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSNTKIS*VEGVRT
Trigger: GGTGCGCACCCCCTCCACCCAGCTAATTTTTGTATT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACCAGGCTGGAGTGCAGTaGCACAATCTCGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNQAGVQ*HNLDLN
Trigger: GTTGAGATCGAGATTGTGCCACTGCACTCCAGCCTG...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGTTCTGTGTGTAGCGTaGCCAGTAGCAGCGACATCA +
Preference number: 4 (lower is better)
Translates to: SSSDISLGSTKTERRSEIVLCVA*PVAATS
Trigger: TGATGTCGCTGCTACTGGCCACGCTACACACAGAAC...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp CAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGACAGGCACAACGCAATCATaGAGCAGCTTGGTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: QVEKEAAVLCVAWPVAATGTTQS*SSLVKN
Trigger: GTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCC...TGTCGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp AGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATACGACCCTGATACAGTaGCATCACCCAAACCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLHQGTTLIQWHHPNLFHTTLIQ*HHPNLF
Trigger: AAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGT...ATGAAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTTGTCACCTGGGATGCTaGTGGCTCAAACTCTTACCG +
Preference number: 4 (lower is better)
Translates to: SSSDISLGSTKTERRSEICHLGC*WLKLLP
Trigger: CGGTAAGAGTTTGAGCCACCAGCATCCCAGGTGACA...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GACAAGACATCTGCTGCTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTTGTCCCTTTCCAGGCTaGATTGATGTCACCTGGGAT +
Preference number: 4 (lower is better)
Translates to: DKTSAAAGSSSRKGSSSSCPFPG*IDVTWD
Trigger: ATCCCAGGTGACATCAATCCAGCCTGGAAAGGGACA...AGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAGCAGCAGATGTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp CACCCAAACCTGTTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTGAGCATCTGGGTGTGTaGATGGGTGTGTATGTGATC +
Preference number: 4 (lower is better)
Translates to: HPNLFHPLFQAQRNHGAAEHLGV*MGVYVI
Trigger: GATCACATACACACCCATCCACACACCCAGATGCTC...AGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAAACAGGTTTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673317.1
3UTR CAA 72 bp TCTGTACCTTCACGCGTAGAGCAGGTACGCACTGATTaGAAGAGTAGTTGGTGTGTCTCCCATACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SVPSRVEQVRTD*KSSWCVSHTVL
Trigger: CAGCACAGTATGGGAGACACACCAACTACTCTTCAAATCAGTGCGTACCTGCTCTACGCGTGAAGGTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216366.8
ENST00000334725.8
ENST00000554345.5
CDS-3UTR TCA 90 bp GTTCTTTCATCTGCTGAAAACGTCCCTCAAACAGAAGTAGGGTCATCTTCCAGTACCAGGGTACGACCCTaGTACAGTGGCATCACCCAA +
Preference number: 4 (lower is better)
Translates to: VLSSAENVPQTEVGSSSSTRVRP*YSGITQ
Trigger: TTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGT...ACTGGAAGATGACCCTACTTCTGTTTGAGGGACGTTTTCAGCAGATGAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
CDS-3UTR TCA 90 bp GTGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCATTAGTGGGCAGACCTTaGTTGACTATAGAAATTCAG +
Preference number: 4 (lower is better)
Translates to: VASSSDISLGSTKTERRSLVGRP*LTIEIQ
Trigger: CTGAATTTCTATAGTCAATCAAGGTCTGCCCACTAA...TGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR GCA 90 bp AGGTTTTCTGTACCTTCACGCGTAGAGCAGGTACGCACTGATTTGAAGAGTAGTGTGTCTCCCATACTGTaGTGTTCATTGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RFSVPSRVEQVRTDLKSSVSPIL*CSLVPS
Trigger: GGAGGGCACCAATGAACAGCACAGTATGGGAGACAC...ACTACTCTTCAAATCAGTGCGTACCTGCTCTACGCGTGAAGGTACAGAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR GCA 90 bp ATGGGGGTGGTGGAGGCAGCTCCTTTGAATGATGAACTGTCTGGAGAAAAGCAATGTAACTGGAACCTGTaGTGCTCAGGTTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: MGVVEAAPLNDELSGEKQCNWNL*CSGCDG
Trigger: ACCATCACAACCTGAGCAGCACAGGTTCCAGTTACA...TTGCTTTTCTCCAGACAGTTCATCATTCAAAGGAGCTGCCTCCACCACCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTTGTAACTGGAACCTGTaGTGCTCAGGTTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSCNWNL*CSGCDG
Trigger: ACCATCACAACCTGAGCAGCACAGGTTCCAGTTACA...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR GCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACGAGATTAGAGGTGCTTaGCACCATGCCTGGCTAACT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNEIRGA*HHAWLT
Trigger: AGTTAGCCAGGCATGGTGGCAAGCACCTCTAATCTC...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTGTGATCATAGTTCACTaGAGCCTCAAACTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSVIIVH*SLKLLG
Trigger: GCCTAGGAGTTTGAGGCTGCAGTGAACTATGATCAC...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTGATGGATCATGTGACTaGAGGAATTCGAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSDGSCD*RNSRPV
Trigger: GACTGGTCTCGAATTCCTGCAGTCACATGATCCATC...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR GCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACAGGCGTAAGCCACCATaGCTGGCTGCATTCTACTTT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNRRKPP*LAAFYF
Trigger: AAAGTAGAATGCAGCCAGGCATGGTGGCTTACGCCT...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR GCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTAGGGTCATCTTCCAGTaGAAGCACCAGCACCTGATA +
Preference number: 4 (lower is better)
Translates to: SSSDISLGSTKTERRSEIRVIFQ*KHQHLI
Trigger: TATCAGGTGCTGGTGCTTGCACTGGAAGATGACCCT...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673317.1
CDS-3UTR CCA 90 bp CACCCAAACCTGTTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTGGCACAACGCAATCATaGAGCAGCTTGGTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: HPNLFHPLFQAQRNHGAAGTTQS*SSLVKN
Trigger: GTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCC...AGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAAACAGGTTTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GTCCCTTTCCAGGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTCAAACTCTTACCGTATaGGCGCAGAAGGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: VPFQAGLMSPGMLVAQTLQTLTV*AQKENL
Trigger: CAAATTTTCCTTCTGCGCCCATACGGTAAGAGTTTG...AAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp AAGGAAAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATTGGATTGATGTCACCTaGGATGCTGGTGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KENLTSSLHQGTTLIQWHWIDVT*DAGGSN
Trigger: GTTTGAGCCACCAGCATCCCAGGTGACATCAATCCA...ATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTTGTCCCTTTCCAGGCTaGATTGATGTCACCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSSDISLGSTKTERRSEICPFPG*IDVTWD
Trigger: ATCCCAGGTGACATCAATCCAGCCTGGAAAGGGACA...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAACAGTTCAAAAGTTATaGCAAGGGATGGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: LQAPQVEKEAAVLCVAWPTVQKL*QGMAVT
Trigger: AGTTACAGCCATCCCTTGTCATAACTTTTGAACTGT...TGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp TGCTGGGGCTCCAGGGCTGAGCATATTTTGGGAAGTTCATCAATTGGTTCCTGTAGGTACGCACTGATTTaGAGAGTAGTTGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CWGSRAEHILGSSSIGSCRYALI*RVVGVS
Trigger: AGACACACCAACTACTCTTCAAATCAGTGCGTACCT...ACAGGAACCAATTGATGAACTTCCCAAAATATGCTCAGCCCTGGAGCCCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR TCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTTTGTTTTTGTGTTTTTaGGGCAGGGCCTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSLFLCF*GRASLH
Trigger: ATGGAGTGAGGCCCTGCCTCAAAAACACAAAAACAA...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR TCA 90 bp CACCCAAACCTGTTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTGGAACCACTGAACTTTaGGAACACAACCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: HPNLFHPLFQAQRNHGAAGTTEL*EHNRNA
Trigger: AGCATTTCGGTTGTGTTCTCAAAGTTCAGTGGTTCC...AGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAAACAGGTTTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGAACCAAGGAACCACTaGACTTTGAGAACACAACCG +
Preference number: 4 (lower is better)
Translates to: SSSDISLGSTKTERRSEIEPRNH*TLRTQP
Trigger: CGGTTGTGTTCTCAAAGTTCAGTGGTTCCTTGGTTC...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp CATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGTAATGGAACAAGGGATGGCTGTAACTaGAACCTGTGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HQLGFDQNGTEIRNCNGTRDGCN*NLCCSG
Trigger: ACCTGAGCAGCACAGGTTCCAGTTACAGCCATCCCT...TGTTCCATTACAATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACCTGGTCTTGAATTTCTaGCCTCAAGCGATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNLVLNF*PQAILL
Trigger: AAGGAGGATCGCTTGAGGCCAGAAATTCAAGACCAG...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CCA 90 bp CATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGTAATGGAACATGTCACCTGGGATGCTaGTGGCTCAAACTCTTACCG +
Preference number: 4 (lower is better)
Translates to: HQLGFDQNGTEIRNCNGTCHLGC*WLKLLP
Trigger: CGGTAAGAGTTTGAGCCACCAGCATCCCAGGTGACA...TGTTCCATTACAATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp AAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCACAGTTCAAAAGTTATaGCAAGGGATGGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: KFDLKLAPGYDPDTVASPTVQKL*QGMAVT
Trigger: AGTTACAGCCATCCCTTGTCATAACTTTTGAACTGT...GGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGACATTAGTGGGCAGACCTTaGTTGACTATAGAAATTCAG +
Preference number: 4 (lower is better)
Translates to: QVEKEAAVLCVAWPVAATLVGRP*LTIEIQ
Trigger: CTGAATTTCTATAGTCAATCAAGGTCTGCCCACTAA...TGTCGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAATTCTGTTTACTTGCTaGAGTGGCAGTATTTTACCA +
Preference number: 4 (lower is better)
Translates to: LQAPQVEKEAAVLCVAWPILFTC*SGSILP
Trigger: TGGTAAAATACTGCCACTTCAGCAAGTAAACAGAAT...TGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACAAGGTTTTGCCATGTTaGCCAGGCTGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNKVLPC*PGWFQT
Trigger: AGTTTGAAACCAGCCTGGCCAACATGGCAAAACCTT...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACCAGAATGCGAAACAGTaGATAAGAGAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNQNAKQ*IREGLL
Trigger: CAGTAGTCCCTCTCTTATCCACTGTTTCGCATTCTG...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CCA 90 bp CATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGTAATGGAACATGGATTGATGTCACCTaGGATGCTGGTGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: HQLGFDQNGTEIRNCNGTWIDVT*DAGGSN
Trigger: GTTTGAGCCACCAGCATCCCAGGTGACATCAATCCA...TGTTCCATTACAATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp GAGCTGATGTCCATGAACCAATTGTTGTTCTTTCATCTGCTGAAAACGTCCCTCGCTGATCCCATATTGTaGAGCTACTGTCTGACACGC +
Preference number: 4 (lower is better)
Translates to: ELMSMNQLLFFHLLKTSLADPIL*SYCLTR
Trigger: GCGTGTCAGACAGTAGCTCCACAATATGGGATCAGC...GAGGGACGTTTTCAGCAGATGAAAGAACAACAATTGGTTCATGGACATCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
CDS-3UTR TCA 90 bp CCAAATACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGCGTAGAGCAGGTACAGTTCAAAAGTTATaGCAAGGGATGGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: PNTEKAVEVFCTFTRRAGTVQKL*QGMAVT
Trigger: AGTTACAGCCATCCCTTGTCATAACTTTTGAACTGT...ACCTGCTCTACGCGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR TCA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTTGTTCTTTCATCTGCTaGAAACGTCCCTCAAACAGA +
Preference number: 4 (lower is better)
Translates to: SSSDISLGSTKTERRSEICSFIC*KRPSNR
Trigger: TCTGTTTGAGGGACGTTTTCAGCAGATGAAAGAACA...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp ATGGAACACAGTATAGTTTCAGGAGCTGATGTCCATGAACCAATTGTTGTTCTTCTTTCCAGGCTGGATTaGTGTCACCTGGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: MEHSIVSGADVHEPIVVLLSRLD*CHLGCW
Trigger: CCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAG...AAGAACAACAATTGGTTCATGGACATCAGCTCCTGAAACTATACTGTGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp TCAGAAAAGGACAGCACTGATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCGAACCAAGGAACCACTaGACTTTGAGAACACAACCG +
Preference number: 4 (lower is better)
Translates to: SEKDSTDEKLIPYCGATVEPRNH*TLRTQP
Trigger: CGGTTGTGTTCTCAAAGTTCAGTGGTTCCTTGGTTC...GACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTCCTTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR GCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACGCCACCATGCCTGGCTaGATTCTACTTTTAAACTTT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNATMPG*ILLLNF
Trigger: AAAGTTTAAAAGTAGAATGCAGCCAGGCATGGTGGC...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR GCA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTACACAAACCACAGAATaGGAAACAGTGGATAAGAGA +
Preference number: 4 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSTQTTE*ETVDKR
Trigger: TCTCTTATCCACTGTTTCGCATTCTGTGGTTTGTGT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR TCA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACACAGTTCAAAAGTTATaGCAAGGGATGGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNTVQKL*QGMAVT
Trigger: AGTTACAGCCATCCCTTGTCATAACTTTTGAACTGT...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR TCA 90 bp GACAAGACATCTGCTGCTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTATTCTGTTTACTTGCTaGAGTGGCAGTATTTTACCA +
Preference number: 4 (lower is better)
Translates to: DKTSAAAGSSSRKGSSSSILFTC*SGSILP
Trigger: TGGTAAAATACTGCCACTTCAGCAAGTAAACAGAAT...AGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAGCAGCAGATGTCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp CATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGTAATGGAACAGGAACCACTGAACTTTaGGAACACAACCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: HQLGFDQNGTEIRNCNGTGTTEL*EHNRNA
Trigger: AGCATTTCGGTTGTGTTCTCAAAGTTCAGTGGTTCC...TGTTCCATTACAATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp TTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTGAAAAACAAGGAACCACTGAACTTTaGGAACACAACCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: FIHCFRHNAIMEQLGEKQGTTEL*EHNRNA
Trigger: AGCATTTCGGTTGTGTTCTCAAAGTTCAGTGGTTCC...TTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp TCTTTAAAGGCACCAAATACTGAAAAGGCCGTGGAGGTTTTCTGTACCTTCACGATACTGAAAAGGCCGTaGAGGTTTTCTGTACCTTCA +
Preference number: 4 (lower is better)
Translates to: SLKAPNTEKAVEVFCTFTILKRP*RFSVPS
Trigger: TGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTAT...CGTGAAGGTACAGAAAACCTCCACGGCCTTTTCAGTATTTGGTGCCTTTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CCA 90 bp TTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTGAAAAACAACAAACTCTTACCGTATaGGCGCAGAAGGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: FIHCFRHNAIMEQLGEKQQTLTV*AQKENL
Trigger: CAAATTTTCCTTCTGCGCCCATACGGTAAGAGTTTG...TTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CCA 90 bp ATGGAACACAGTATAGTTTCAGGAGCTGATGTCCATGAACCAATTGTTGTTCTTCACCTGGGATGCTGGTaGCTCAAACTCTTACCGTAT +
Preference number: 4 (lower is better)
Translates to: MEHSIVSGADVHEPIVVLHLGCW*LKLLPY
Trigger: ATACGGTAAGAGTTTGAGCCACCAGCATCCCAGGTG...AAGAACAACAATTGGTTCATGGACATCAGCTCCTGAAACTATACTGTGTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp TTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTGAAAAACAAACAGTTCAAAAGTTATaGCAAGGGATGGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: FIHCFRHNAIMEQLGEKQTVQKL*QGMAVT
Trigger: AGTTACAGCCATCCCTTGTCATAACTTTTGAACTGT...TTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR TCA 90 bp GTTCTTTCATCTGCTGAAAACGTCCCTCAAACAGAAGTAGGGTCATCTTCCAGTATTCTGTTTACTTGCTaGAGTGGCAGTATTTTACCA +
Preference number: 4 (lower is better)
Translates to: VLSSAENVPQTEVGSSSSILFTC*SGSILP
Trigger: TGGTAAAATACTGCCACTTCAGCAAGTAAACAGAAT...ACTGGAAGATGACCCTACTTCTGTTTGAGGGACGTTTTCAGCAGATGAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
3UTR CAA 72 bp TTAAATCAAGAAAACATTCCGGATTCTAGCCTATATTaGTGGGGCCTGGATTCTAGCCTATATTTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LNQENIPDSSLY*WGLDSSLYLCL
Trigger: GAGGCACAAATATAGGCTAGAATCCAGGCCCCACAAATATAGGCTAGAATCCGGAATGTTTTCTTGATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216366.8
ENST00000554345.5
3UTR CAA 72 bp AATTTCTCATTAAATCAGGCTGACATTATCTCCCACTaGGAGAAACCCTATTCTGGTTTCCGGATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: NFSLNQADIISH*EKPYSGFRISK
Trigger: TTTAGAGATCCGGAAACCAGAATAGGGTTTCTCCAAGTGGGAGATAATGTCAGCCTGATTTAATGAGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216366.8
3UTR CAA 72 bp TTCTGGAATTTTCTGTTTAATATTTTGGGACCTCAGTaGACCATGAGTAACACAAACCACAGAATGCGAAAC +
Preference number: 4 (lower is better)
Translates to: FWNFLFNILGPQ*TMSNTNHRMRN
Trigger: GTTTCGCATTCTGTGGTTTGTGTTACTCATGGTCAACTGAGGTCCCAAAATATTAAACAGAAAATTCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542754.7
ENST00000616371.4
ENST00000622409.4
CDS TCA 90 bp GCGACCAGCCAGGTTAACAACCAGCTCAGAAAGCCGGGACACGGGTaGGAGACCCCTGGGAAGGAAACAGCGCCCGGGGACGGCCTGCTA +
Preference number: 5 (lower is better)
Translates to: ATSQVNNQLRKPGHG*ETPGKETAPGDGLL
Trigger: TAGCAGGCCGTCCCCGGGCGCTGTTTCCTTCCCAGGGGTCTCTCACCCGTGTCCCGGCTTTCTGAGCTGGTTGTTAACCTGGCTGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS-3UTR CAA 90 bp CATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGCCCCTGGCTGTCCAGGCAGGACCAGAGTGCATTaGCCAAGTACTGTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: HRMGLLEHRARGAPGCPGRTRVH*PSTVEN
Trigger: GTTTTCCACAGTACTTGGCAAATGCACTCTGGTCCT...GCCTGGACAGCCAGGGGCTCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CAA 90 bp GGGTGCTGGCGAAGCAGACATAGAATGGGCCTTCTAGAGCACAGGGCCCGAGGAGTGGAGGCAGCTCCTTaGAATGATGAACTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: GCWRSRHRMGLLEHRARGVEAAP*NDELSG
Trigger: TCCAGACAGTTCATCATTCAAAGGAGCTGCCTCCAC...TCCTCGGGCCCTGTGCTCTAGAAGGCCCATTCTATGTCTGCTTCGCCAGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS TCA 90 bp GGGAAAGAGGGCCCACCCTTGGGACTGCCTGAAACACTCAAAGAATaGAAAAGAAACGTCAGGAATCCGAGACGGGATGCGGTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: GKEGPPLGLPETLKE*KRNVRNPRRDAVGQ
Trigger: CTGGCCGACCGCATCCCGTCTCGGATTCCTGACGTTTCTTTTTCATTCTTTGAGTGTTTCAGGCAGTCCCAAGGGTGGGCCCTCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS-3UTR CAA 90 bp ACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGAATTTGACCTCAAGCTaGCACCAGGGTACGACCCTG +
Preference number: 5 (lower is better)
Translates to: TSSLHQGTTLIQWHHPNLNLTSS*HQGTTL
Trigger: CAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT...CAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp CTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAAGCAGCGACATCAGCTaGGGTTCGACCAAAACGGAA +
Preference number: 5 (lower is better)
Translates to: LQAPQVEKEAAVLCVAWPSSDIS*GSTKTE
Trigger: TTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCT...TGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS TCA 90 bp GAGCGAGTGACAGGAAGGGAAAGAGGGCCCACCCTTGGGACTGCCTaGAACACTCAAAGAATGAAAAAGAAACGTCAGGAATCCGAGACG +
Preference number: 5 (lower is better)
Translates to: ERVTGRERGPTLGTA*NTQRMKKKRQESET
Trigger: CGTCTCGGATTCCTGACGTTTCTTTTTCATTCTTTGAGTGTTTCAGGCAGTCCCAAGGGTGGGCCCTCTTTCCCTTCCTGTCACTCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS-3UTR CAA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTAATGATCTACCCACCTaGGCGTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSNDLPT*ASQSAG
Trigger: CCCAGCACTTTGGGACGCCAAGGTGGGTAGATCATT...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CAA 90 bp CTGCAGCCTCAAACTCCTAGGCTTGATCAATTCTCCCATCTCAGCCTCTTGAGTCAGGGTCTCACCATGTaGGCCAAGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LQPQTPRLDQFSHLSLLSQGLTM*AKLVLN
Trigger: GTTCAAGACCAGCTTGGCCAACATGGTGAGACCCTG...ACTCAAGAGGCTGAGATGGGAGAATTGATCAAGCCTAGGAGTTTGAGGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CAA 90 bp AGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATAGCAGCGACATCAGCTaGGGTTCGACCAAAACGGAA +
Preference number: 5 (lower is better)
Translates to: SLHQGTTLIQWHHPNLFHSSDIS*GSTKTE
Trigger: TTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCT...ATGAAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS GCA 90 bp AACACTCAAAGAATGAAAAAGAAACGTCAGGAATCCGAGACGGGATaGGGTCGGCCAGAGCGACCAGCCAGGTTAACAACCAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: NTQRMKKKRQESETG*GRPERPARLTTSSE
Trigger: TTCTGAGCTGGTTGTTAACCTGGCTGGTCGCTCTGGCCGACCGCATCCCGTCTCGGATTCCTGACGTTTCTTTTTCATTCTTTGAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS-3UTR CAA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACTTGCCCAGGCTGGTCTaGAATTTCTGGCCTCAAGCG +
Preference number: 5 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNLPRLV*NFWPQA
Trigger: CGCTTGAGGCCAGAAATTCAAGACCAGCCTGGGCAA...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CAA 90 bp GACAAGACATCTGCTGCTGCAGGCTCCTCAAGTAGAAAAGGAAGCAGCAGTTCTAATTTGACCTCAAGCTaGCACCAGGGTACGACCCTG +
Preference number: 5 (lower is better)
Translates to: DKTSAAAGSSSRKGSSSSNLTSS*HQGTTL
Trigger: CAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT...AGAACTGCTGCTTCCTTTTCTACTTGAGGAGCCTGCAGCAGCAGATGTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS CCA 90 bp GCTCAAGACAGAGACGAGGAATCAGTAACCACAGCCGGAGGATCTTaGCTATTTGCCAGCAGAGAACTGACTGGTTCTAAGAAACCAGAG +
Preference number: 5 (lower is better)
Translates to: AQDRDEESVTTAGGS*LFASRELTGSKKPE
Trigger: CTCTGGTTTCTTAGAACCAGTCAGTTCTCTGCTGGCAAATAGCCAAGATCCTCCGGCTGTGGTTACTGATTCCTCGTCTCTGTCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS-3UTR CAA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTAGCAGCGACATCAGCTaGGGTTCGACCAAAACGGAA +
Preference number: 5 (lower is better)
Translates to: SSSDISLGSTKTERRSEISSDIS*GSTKTE
Trigger: TTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCT...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp GTCCCTTTCCAGGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTAAAGCTGATCCCATATaGTGGAGCTACTGTCTGACA +
Preference number: 5 (lower is better)
Translates to: VPFQAGLMSPGMLVAQTLKADPI*WSYCLT
Trigger: TGTCAGACAGTAGCTCCACAATATGGGATCAGCTTT...AAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCCTGGAAAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp GGGCTGAGCATATTTTGGGAAGTTCATCAATTGGTTCCTGTAGTCCCAGCTACTATACTGTGCTGTTCATaGGTGCCCTCCCCTGGCTAT +
Preference number: 5 (lower is better)
Translates to: GLSIFWEVHQLVPVVPATILCCS*VPSPGY
Trigger: ATAGCCAGGGGAGGGCACCAATGAACAGCACAGTAT...AGTAGCTGGGACTACAGGAACCAATTGATGAACTTCCCAAAATATGCTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CAA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACCAAGGTTTTGCCATGTaGGCCAGGCTGGTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNQGFAM*ARLVSN
Trigger: GTTTGAAACCAGCCTGGCCAACATGGCAAAACCTTG...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CAA 90 bp GGCTGGATTGATGTCACCTGGGATGCTGGTGGCTCAAACTCTTACCGTATGGGCATGTCCATGAACCAATaGTTGTTCTTTCATCTGCTG +
Preference number: 5 (lower is better)
Translates to: GWIDVTWDAGGSNSYRMGMSMNQ*LFFHLL
Trigger: CAGCAGATGAAAGAACAACAATTGGTTCATGGACAT...GCCCATACGGTAAGAGTTTGAGCCACCAGCATCCCAGGTGACATCAATCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp CAAGTAGAAAAGGAAGCAGCAGTTCTGTGTGTAGCGTGGCCAGTAGCAGCGACACAATCATGGAGCAGCTaGGTGAAAAACAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: QVEKEAAVLCVAWPVAATQSWSS*VKNNCP
Trigger: TGGACAGTTGTTTTTCACCAAGCTGCTCCATGATTG...TGTCGCTGCTACTGGCCACGCTACACACAGAACTGCTGCTTCCTTTTCTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp AAGCAAGTCTGCTGGGGCTCCAGGGCTGAGCATATTTTGGGAAGTTCATCAATTCAGGTACGCACTGATTaGAAGAGTAGTTGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: KQVCWGSRAEHILGSSSIQVRTD*KSSWCV
Trigger: GACACACCAACTACTCTTCAAATCAGTGCGTACCTG...AATTGATGAACTTCCCAAAATATGCTCAGCCCTGGAGCCCCAGCAGACTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CAA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTAGGACCAGAGTGCATTaGCCAAGTACTGTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: SSSDISLGSTKTERRSEIRTRVH*PSTVEN
Trigger: GTTTTCCACAGTACTTGGCAAATGCACTCTGGTCCT...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGTCCATGAACCAATTGTaGTTCTTTCATCTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: WPVAATSAWVRPKRNGDQSMNQL*FFHLLK
Trigger: TTTCAGCAGATGAAAGAACAACAATTGGTTCATGGA...CTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TCAGAAAAGGACAGCACTGATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCAATTTGACCTCAAGCTaGCACCAGGGTACGACCCTG +
Preference number: 5 (lower is better)
Translates to: SEKDSTDEKLIPYCGATVNLTSS*HQGTTL
Trigger: CAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATT...GACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTCCTTTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TGGCCAGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGTTTAGTGGGCAGACCTaGATTGACTATAGAAATTCA +
Preference number: 5 (lower is better)
Translates to: WPVAATSAWVRPKRNGDQFSGQT*IDYRNS
Trigger: TGAATTTCTATAGTCAATCAAGGTCTGCCCACTAAA...CTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTGGTGTGTATGTGATCTaGGGCCCCTTTTATGTATGG +
Preference number: 5 (lower is better)
Translates to: SSSDISLGSTKTERRSEIGVYVI*GPFYVW
Trigger: CCATACATAAAAGGGGCCCAAGATCACATACACACC...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673317.1
CDS-3UTR CAA 90 bp AAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCTTCAATGAAAGAGCATaGTTCATTGGATCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: KFDLKLAPGYDPDTVASPFNERA*FIGSRE
Trigger: CTCTCTCGATCCAATGAACAATGCTCTTTCATTGAA...GGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp GGGCTGAGCATATTTTGGGAAGTTCATCAATTGGTTCCTGTAGTCCCAGCTACTTGGGAAGTTCATCAATaGGTTCCTGTAGTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GLSIFWEVHQLVPVVPATWEVHQ*VPVVPA
Trigger: AGCTGGGACTACAGGAACCAATTGATGAACTTCCCA...AGTAGCTGGGACTACAGGAACCAATTGATGAACTTCCCAAAATATGCTCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CAA 90 bp ATGGGGGTGGTGGAGGCAGCTCCTTTGAATGATGAACTGTCTGGAGAAAAGCAAAGGGCTGAGCATATTTaGGGAAGTTCATCAATTGGT +
Preference number: 5 (lower is better)
Translates to: MGVVEAAPLNDELSGEKQRAEHI*GSSSIG
Trigger: ACCAATTGATGAACTTCCCAAAATATGCTCAGCCCT...TTGCTTTTCTCCAGACAGTTCATCATTCAAAGGAGCTGCCTCCACCACCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CAA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTCAATCATGGAGCAGCTaGGTGAAAAACAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: SSSDISLGSTKTERRSEIQSWSS*VKNNCP
Trigger: TGGACAGTTGTTTTTCACCAAGCTGCTCCATGATTG...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp AAGGAAAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATAAAGCTGATCCCATATaGTGGAGCTACTGTCTGACA +
Preference number: 5 (lower is better)
Translates to: KENLTSSLHQGTTLIQWHKADPI*WSYCLT
Trigger: TGTCAGACAGTAGCTCCACAATATGGGATCAGCTTT...ATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS TCA 90 bp GGCTGTCTTGTCATAGTTGTTGGTGATGAACACTCTGGACTCTGCTaGATAGTTTTCCTGCCTTGTGGTACTTACCTGATAAGGACCAGA +
Preference number: 5 (lower is better)
Translates to: GCLVIVVGDEHSGLC*IVFLPCGTYLIRTR
Trigger: TCTGGTCCTTATCAGGTAAGTACCACAAGGCAGGAAAACTATTCAGCAGAGTCCAGAGTGTTCATCACCAACAACTATGACAAGACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313566.11
CDS-3UTR CAA 90 bp ATGGGGGTGGTGGAGGCAGCTCCTTTGAATGATGAACTGTCTGGAGAAAAGCAATTCAATGAAAGAGCATaGTTCATTGGATCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: MGVVEAAPLNDELSGEKQFNERA*FIGSRE
Trigger: CTCTCTCGATCCAATGAACAATGCTCTTTCATTGAA...TTGCTTTTCTCCAGACAGTTCATCATTCAAAGGAGCTGCCTCCACCACCCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS-3UTR CAA 90 bp GTTCTTTCATCTGCTGAAAACGTCCCTCAAACAGAAGTAGGGTCATCTTCCAGTAGGACCAGAGTGCATTaGCCAAGTACTGTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: VLSSAENVPQTEVGSSSSRTRVH*PSTVEN
Trigger: GTTTTCCACAGTACTTGGCAAATGCACTCTGGTCCT...ACTGGAAGATGACCCTACTTCTGTTTGAGGGACGTTTTCAGCAGATGAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672143.1
CDS-3UTR CAA 90 bp AGCTTGCACCAGGGTACGACCCTGATACAGTGGCATCACCCAAACCTGTTTCATCTAGATTCTGTTTACTaGCTGAAGTGGCAGTATTTT +
Preference number: 5 (lower is better)
Translates to: SLHQGTTLIQWHHPNLFHLDSVY*LKWQYF
Trigger: AAAATACTGCCACTTCAGCAAGTAAACAGAATCTAG...ATGAAACAGGTTTGGGTGATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TCAGAAAAGGACAGCACTGATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCGGTGTGTATGTGATCTaGGGCCCCTTTTATGTATGG +
Preference number: 5 (lower is better)
Translates to: SEKDSTDEKLIPYCGATVGVYVI*GPFYVW
Trigger: CCATACATAAAAGGGGCCCAAGATCACATACACACC...GACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTCCTTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673317.1
CDS-3UTR CAA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACTTCAATGAAAGAGCATaGTTCATTGGATCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNFNERA*FIGSRE
Trigger: CTCTCTCGATCCAATGAACAATGCTCTTTCATTGAA...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CAA 90 bp CACCCAAACCTGTTTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTCCATGAACCAATTGTaGTTCTTTCATCTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: HPNLFHPLFQAQRNHGAASMNQL*FFHLLK
Trigger: TTTCAGCAGATGAAAGAACAACAATTGGTTCATGGA...AGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAAACAGGTTTGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp GTAGTACAACATGATCATGCTTGTGAAAAGCCACTGCAGTCCAGCCTGGACAACTTTCTGTTTAATATTTaGGGACCTCAGTTGACCATG +
Preference number: 5 (lower is better)
Translates to: VVQHDHACEKPLQSSLDNFLFNI*GPQLTM
Trigger: CATGGTCAACTGAGGTCCCAAAATATTAAACAGAAA...GTTGTCCAGGCTGGACTGCAGTGGCTTTTCACAAGCATGATCATGTTGTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542754.7
CDS-3UTR CAA 90 bp AAGGAAAATTTGACCTCAAGCTTGCACCAGGGTACGACCCTGATACAGTGGCATTTTAGTGGGCAGACCTaGATTGACTATAGAAATTCA +
Preference number: 5 (lower is better)
Translates to: KENLTSSLHQGTTLIQWHFSGQT*IDYRNS
Trigger: TGAATTTCTATAGTCAATCAAGGTCTGCCCACTAAA...ATGCCACTGTATCAGGGTCGTACCCTGGTGCAAGCTTGAGGTCAAATTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp AGTAGCAGCGACATCAGCTTGGGTTCGACCAAAACGGAACGGAGATCAGAAATTCTAGATTCTGTTTACTaGCTGAAGTGGCAGTATTTT +
Preference number: 5 (lower is better)
Translates to: SSSDISLGSTKTERRSEILDSVY*LKWQYF
Trigger: AAAATACTGCCACTTCAGCAAGTAAACAGAATCTAG...AATTTCTGATCTCCGTTCCGTTTTGGTCGAACCCAAGCTGATGTCGCTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TCAGAAAAGGACAGCACTGATGAAAAGCTGATCCCATATTGTGGAGCTACTGTCTTCAATGAAAGAGCATaGTTCATTGGATCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SEKDSTDEKLIPYCGATVFNERA*FIGSRE
Trigger: CTCTCTCGATCCAATGAACAATGCTCTTTCATTGAA...GACAGTAGCTCCACAATATGGGATCAGCTTTTCATCAGTGCTGTCCTTTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTGAAAAACAATTCAATGAAAGAGCATaGTTCATTGGATCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: FIHCFRHNAIMEQLGEKQFNERA*FIGSRE
Trigger: CTCTCTCGATCCAATGAACAATGCTCTTTCATTGAA...TTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTGAAAAACAAATGTCCATGAACCAATaGTTGTTCTTTCATCTGCTG +
Preference number: 5 (lower is better)
Translates to: FIHCFRHNAIMEQLGEKQMSMNQ*LFFHLL
Trigger: CAGCAGATGAAAGAACAACAATTGGTTCATGGACAT...TTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp GTTCTTTCATCTGCTGAAAACGTCCCTCAAACAGAAGTAGGGTCATCTTCCAGTATGTCCATGAACCAATaGTTGTTCTTTCATCTGCTG +
Preference number: 5 (lower is better)
Translates to: VLSSAENVPQTEVGSSSSMSMNQ*LFFHLL
Trigger: CAGCAGATGAAAGAACAACAATTGGTTCATGGACAT...ACTGGAAGATGACCCTACTTCTGTTTGAGGGACGTTTTCAGCAGATGAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672143.1
ENST00000673001.1
CDS-3UTR CAA 90 bp TTCATCCACTGTTTCAGGCACAACGCAATCATGGAGCAGCTTGGTGAAAAACAATCCATGAACCAATTGTaGTTCTTTCATCTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: FIHCFRHNAIMEQLGEKQSMNQL*FFHLLK
Trigger: TTTCAGCAGATGAAAGAACAACAATTGGTTCATGGA...TTGTTTTTCACCAAGCTGCTCCATGATTGCGTTGTGCCTGAAACAGTGGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TATAAGAGAACCAAGGAACCACTGAACTTTGAGAACACAACCGAAATGCTAACTAAAGCTGATCCCATATaGTGGAGCTACTGTCTGACA +
Preference number: 5 (lower is better)
Translates to: YKRTKEPLNFENTTEMLTKADPI*WSYCLT
Trigger: TGTCAGACAGTAGCTCCACAATATGGGATCAGCTTT...AGTTAGCATTTCGGTTGTGTTCTCAAAGTTCAGTGGTTCCTTGGTTCTCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS-3UTR CAA 90 bp TATAAGAGAACCAAGGAACCACTGAACTTTGAGAACACAACCGAAATGCTAACTCTAGATTCTGTTTACTaGCTGAAGTGGCAGTATTTT +
Preference number: 5 (lower is better)
Translates to: YKRTKEPLNFENTTEMLTLDSVY*LKWQYF
Trigger: AAAATACTGCCACTTCAGCAAGTAAACAGAATCTAG...AGTTAGCATTTCGGTTGTGTTCTCAAAGTTCAGTGGTTCCTTGGTTCTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672143.1
ENST00000673001.1
ENST00000673317.1
CDS CCA 72 bp CCAGCTCAGAAAGCCGGGACACGGGTGAGAGACCCCTaGGAAGGAAACAGCGCCCGGGGACGGCCTGCTAAA +
Preference number: 6 (lower is better)
Translates to: PAQKAGTRVRDP*EGNSARGRPAK
Trigger: TTTAGCAGGCCGTCCCCGGGCGCTGTTTCCTTCCCAGGGGTCTCTCACCCGTGTCCCGGCTTTCTGAGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS GCA 72 bp GCCTCCCAAACACTCGCACAAAGCCTGGAGGGCTCCTaGCAAAATCTGTGGGCCTGCAGTATTCTAAGCAAA +
Preference number: 6 (lower is better)
Translates to: ASQTLAQSLEGS*QNLWACSILSK
Trigger: TTTGCTTAGAATACTGCAGGCCCACAGATTTTGGCAGGAGCCCTCCAGGCTTTGTGCGAGTGTTTGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313566.11
CDS GCA 72 bp AGAATGAAAAAGAAACGTCAGGAATCCGAGACGGGATaGGGTCGGCCAGAGCGACCAGCCAGGTTAACAACC +
Preference number: 6 (lower is better)
Translates to: RMKKKRQESETG*GRPERPARLTT
Trigger: GGTTGTTAACCTGGCTGGTCGCTCTGGCCGACCGCATCCCGTCTCGGATTCCTGACGTTTCTTTTTCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS TCA 72 bp GGCCCACCCTTGGGACTGCCTGAAACACTCAAAGAATaGAAAAGAAACGTCAGGAATCCGAGACGGGATGCG +
Preference number: 6 (lower is better)
Translates to: GPPLGLPETLKE*KRNVRNPRRDA
Trigger: CGCATCCCGTCTCGGATTCCTGACGTTTCTTTTTCATTCTTTGAGTGTTTCAGGCAGTCCCAAGGGTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS CCA 72 bp CTCGCACAAAGCCTGGAGGGCTCCTGCCAAAATCTGTaGGCCTGCAGTATTCTAAGCAAATCGTGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: LAQSLEGSCQNL*ACSILSKSCLF
Trigger: AAACAAGCACGATTTGCTTAGAATACTGCAGGCCCACAGATTTTGGCAGGAGCCCTCCAGGCTTTGTGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313566.11
CDS GCA 72 bp AAACGTCCCTCAAACAGAAGTAGGGTCATCTTCCAGTaGAAGCACCAGCACCTGATAAGGACCAGAGTGCAT +
Preference number: 6 (lower is better)
Translates to: KRPSNRSRVIFQ*KHQHLIRTRVH
Trigger: ATGCACTCTGGTCCTTATCAGGTGCTGGTGCTTGCACTGGAAGATGACCCTACTTCTGTTTGAGGGACGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673317.1
CDS CCA 72 bp AGAGACGAGGAATCAGTAACCACAGCCGGAGGATCTTaGCTATTTGCCAGCAGAGAACTGACTGGTTCTAAG +
Preference number: 6 (lower is better)
Translates to: RDEESVTTAGGS*LFASRELTGSK
Trigger: CTTAGAACCAGTCAGTTCTCTGCTGGCAAATAGCCAAGATCCTCCGGCTGTGGTTACTGATTCCTCGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555417.6
CDS CAA 90 bp TCTGGAGAAAAGCAAGTCTGCTGGGGCTCCAGGGCTGAGCATATTTaGGGAAGTTCATCAATTGGTTCCACTCGGCTGAAATACTCATCT +
Preference number: 6 (lower is better)
Translates to: SGEKQVCWGSRAEHI*GSSSIGSTRLKYSS
Trigger: AGATGAGTATTTCAGCCGAGTGGAACCAATTGATGAACTTCCCAAAATATGCTCAGCCCTGGAGCCCCAGCAGACTTGCTTTTCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554609.6
CDS CCA 72 bp ACACTCTGGACTCTGCTGAATAGTTTTCCTGCCTTGTaGTACTTACCTGATAAGGACCAGAGTGCATTTGCC +
Preference number: 6 (lower is better)
Translates to: TLWTLLNSFPAL*YLPDKDQSAFA
Trigger: GGCAAATGCACTCTGGTCCTTATCAGGTAAGTACCACAAGGCAGGAAAACTATTCAGCAGAGTCCAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313566.11
CDS CAA 72 bp TGCAAGCACCAGCACCTGATAAGGACCAGAGTGCATTaGCCAAGTACTGTGGAAAACAGTATTGAAAAAGGA +
Preference number: 6 (lower is better)
Translates to: CKHQHLIRTRVH*PSTVENSIEKG
Trigger: TCCTTTTTCAATACTGTTTTCCACAGTACTTGGCAAATGCACTCTGGTCCTTATCAGGTGCTGGTGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673317.1
CDS TCA 72 bp GTCATAGTTGTTGGTGATGAACACTCTGGACTCTGCTaGATAGTTTTCCTGCCTTGTGGTACTTACCTGATA +
Preference number: 6 (lower is better)
Translates to: VIVVGDEHSGLC*IVFLPCGTYLI
Trigger: TATCAGGTAAGTACCACAAGGCAGGAAAACTATTCAGCAGAGTCCAGAGTGTTCATCACCAACAACTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313566.11
CDS CAA 72 bp CCTTGTGGTACTTACCTGATAAGGACCAGAGTGCATTaGCCAAGTACTGTGGAAAACAGTATTGAAAAAGGA +
Preference number: 6 (lower is better)
Translates to: PCGTYLIRTRVH*PSTVENSIEKG
Trigger: TCCTTTTTCAATACTGTTTTCCACAGTACTTGGCAAATGCACTCTGGTCCTTATCAGGTAAGTACCACAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313566.11
CDS CAA 72 bp AGAGCAAGACCTTGTCTGATAAGGACCAGAGTGCATTaGCCAAGTACTGTGGAAAACAGTATTGAAAAAGGA +
Preference number: 6 (lower is better)
Translates to: RARPCLIRTRVH*PSTVENSIEKG
Trigger: TCCTTTTTCAATACTGTTTTCCACAGTACTTGGCAAATGCACTCTGGTCCTTATCAGACAAGGTCTTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334725.8
CDS CAA 72 bp TTCATCAATTGGTTCCTGATAAGGACCAGAGTGCATTaGCCAAGTACTGTGGAAAACAGTATTGAAAAAGGA +
Preference number: 6 (lower is better)
Translates to: FINWFLIRTRVH*PSTVENSIEKG
Trigger: TCCTTTTTCAATACTGTTTTCCACAGTACTTGGCAAATGCACTCTGGTCCTTATCAGGAACCAATTGATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554345.6