RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP4M1 (Homo sapiens)

Ensembl gene IDs: ENSG00000221838

Ensembl transcript IDs: ENST00000359593.9, ENST00000394061.7, ENST00000416938.5, ENST00000421755.5, ENST00000422582.5, ENST00000429084.5, ENST00000438383.5, ENST00000439416.5, ENST00000445208.5, ENST00000445295.1, ENST00000446007.5, ENST00000450807.5, ENST00000463195.5, ENST00000478501.5, ENST00000489387.1, ENST00000495154.1

Found 808 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCAATGGCTCCCAGCCCAACTCCGGCTCCCCTCAGCCTGCTCCGTaGTGCTCCACCTGCCAGCCCCCGGATTCCCACACATGCAGACAT +
Preference number: 1 (lower is better)
Translates to: ANGSQPNSGSPQPAP*CSTCQPPDSHTCRH
Trigger: ATGTCTGCATGTGTGGGAATCCGGGGGCTGGCAGGTGGAGCATCACGGAGCAGGCTGAGGGGAGCCGGAGTTGGGCTGGGAGCCATTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CCA 90 bp CCCATCCACCCAGCAGGTATGCAGAGCTGTGGGACAGGGAGCATCTaGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAG +
Preference number: 1 (lower is better)
Translates to: PIHPAGMQSCGTGSI*RAWVTSEHPGEAQE
Trigger: CTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCCACAGCTCTGCATACCTGCTGGGTGGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR TCA 90 bp TACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: YHRKAGPIAPSWSWD*GLFLPRFRVRRPGG
Trigger: GCCTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR TCA 90 bp GCAGAAACACTGTGCTCCTGTTCTGGCAAAGCTGCGCCCACCGCCTaGCAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCC +
Preference number: 1 (lower is better)
Translates to: AETLCSCSGKAAPTA*QSGRLSGRIRVPWA
Trigger: GGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTGCCAGAACAGGAGCACAGTGTTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR TCA 90 bp CCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGG +
Preference number: 1 (lower is better)
Translates to: PPWPSCPRLGSLRSE*HRRRCGLGVAPTCG
Trigger: CCCACAAGTGGGTGCGACACCTAAGCCACAGCGACGCCTATGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR GCA 90 bp GCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCG +
Preference number: 1 (lower is better)
Translates to: ARRLEKKRLSSRGTN*HLGRRVLVWGASDP
Trigger: CGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR CCA 90 bp GAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGC +
Preference number: 1 (lower is better)
Translates to: ESEGQEAGKETTVLP*DKLPPWPSCPRLGS
Trigger: GCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR CCA 90 bp ACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTaGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCC +
Preference number: 1 (lower is better)
Translates to: TRRRPGRLVMAPSQA*LSWDTMLGLLAVVS
Trigger: GGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
3UTR GCA 90 bp CTGGGCCCATTGCCCCCTCCTGGTCTTGGGACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACG +
Preference number: 1 (lower is better)
Translates to: LGPLPPPGLGTEDSS*PDSESEGQEAGKET
Trigger: CGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCAATGGGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR CCA 90 bp GCACTTCATCCAGGAGTTCGTATACCAGAGCCACATTGCGGGAGATaGTCCCCTCGCCCAGGGAGCCACAGTAATCGCCCAGAAGGGTGG +
Preference number: 1 (lower is better)
Translates to: ALHPGVRIPEPHCGR*SPRPGSHSNRPEGW
Trigger: CCACCCTTCTGGGCGATTACTGTGGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGATGAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR GCA 90 bp CATAGTCCAGCACTTCATCCAGGAGTTCGTATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGCCCAGGGAGCCACAGTAATCGCCCA +
Preference number: 1 (lower is better)
Translates to: HSPALHPGVRIPEPH*GRWSPRPGSHSNRP
Trigger: TGGGCGATTACTGTGGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGATGAAGTGCTGGACTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR GCA 90 bp CTCCATCGCACTTCCTGTCCAGACACTGGTGTCTGCACGAGCGGCTaGCCCACCACAGCCTTCCCCTCCTCCAACCAAGTTTATTGTAAT +
Preference number: 1 (lower is better)
Translates to: LHRTSCPDTGVCTSG*PTTAFPSSNQVYCN
Trigger: ATTACAATAAACTTGGTTGGAGGAGGGGAAGGCTGTGGTGGGGCAGCCGCTCGTGCAGACACCAGTGTCTGGACAGGAAGTGCGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTGGTCTTGGGACTGAGGACTCTTCCT +
Preference number: 1 (lower is better)
Translates to: SDPLQSFLHQIPQKG*AHCPLLVLGLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR CCA 90 bp TTTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTaGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: FISFPLQSWVDEKTP*TTRYGSIAGLAELG
Trigger: TCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
3UTR GCA 90 bp ACTCTGTCACCCAAGCGGGAGTGCACTGATGCAACCTCTGCTCACTaGAGCCTCCACCACCTGGGTTCAAGCATTCTAGTACCTCAACCT +
Preference number: 1 (lower is better)
Translates to: TLSPKRECTDATSAH*SLHHLGSSILVPQP
Trigger: AGGTTGAGGTACTAGAATGCTTGAACCCAGGTGGTGGAGGCTGCAGTGAGCAGAGGTTGCATCAGTGCACTCCCGCTTGGGTGACAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR TCA 90 bp ACAGGCCTAAGATGCTGCACCTGGCCCCGTGCCCATCTTTTCTTATaGGAAAGCCCACAGTGTTCTGTACACACACTAATAGTTCAGCAT +
Preference number: 1 (lower is better)
Translates to: TGLRCCTWPRAHLFL*ESPQCSVHTLIVQH
Trigger: ATGCTGAACTATTAGTGTGTGTACAGAACACTGTGGGCTTTCTCATAAGAAAAGATGGGCACGGGGCCAGGTGCAGCATCTTAGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR TCA 90 bp CCCAGCCCCAGAGGAGAGGCCGAGGTGGAGAGCCCATGGCTGGGAGGTCCTGGGACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: PSPRGEAEVESPWLGGPGTVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...CCCAGGACCTCCCAGCCATGGGCTCTCCACCTCGGCCTCTCCTCTGGGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR GCA 90 bp CCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGCACGTCTGCACGAGCGGCTaGCCCACCACAGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: PSPACSPSSSWSPPPPPHVCTSG*PTTAFP
Trigger: GGGGAAGGCTGTGGTGGGGCAGCCGCTCGTGCAGAC...GTGCGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp CCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGCACCCAGACACTGGTGTCTaGACGAGCGGCTGCCCCACC +
Preference number: 2 (lower is better)
Translates to: PSPACSPSSSWSPPPPPHPDTGV*TSGCPT
Trigger: GGTGGGGCAGCCGCTCGTGCAGACACCAGTGTCTGG...GTGCGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp TCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACCACCGGGGAAGCAGGAGGCTaGGGACAGTCCCCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SIQVLSLSTSAPGSGSTTGEAGG*GQSPSS
Trigger: GCTGGAGGGGGACTGTCCCCAGCCTCCTGCTTCCCC...GGTGGTGGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CAA 90 bp CTGACCCTCTCGCAGGCCCCACAGCCTGGCCCTCGCACCCCTGGCTaGCTGAAGGTTCCTGGCTCCATCGCACTTCCTGTCCAGACACTG +
Preference number: 2 (lower is better)
Translates to: LTLSQAPQPGPRTPG*LKVPGSIALPVQTL
Trigger: CAGTGTCTGGACAGGAAGTGCGATGGAGCCAGGAACCTTCAGCAAGCCAGGGGTGCGAGGGCCAGGCTGTGGGGCCTGCGAGAGGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp GTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 2 (lower is better)
Translates to: VGIAAWPEGQPEESDLEAEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...GGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR GCA 90 bp GACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTGGCGGCTGGCTGCACTaGTGGGGGCCACTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: DHPSRQGEVQPDIEGLALGGWLH*WGPLCS
Trigger: AGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCC...AAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR CCA 90 bp GAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTATCCTCTGCTCCCAGGTaGTCAAGGCTCGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: EHLEGLGYLRAPWGGPGVSSAPR*SRLGPR
Trigger: CCTGGGCCCGAGCCTTGACCACCTGGGAGCAGAGGA...TACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CAA 90 bp GCGTCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: ASLWLRCRTHLWGLA*PHGLKASLRNRTWR
Trigger: CCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCACAGCGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR TCA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: ALPHGLKASLRNRTWRPETVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR GCA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: ALPHGLKASLRNRTWRPERGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CCA 90 bp CCACCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGTTCCTGTCCAGACACTaGTGTCTGCACGAGCGGCTG +
Preference number: 2 (lower is better)
Translates to: PPSPACSPSSSWSPPPPPFLSRH*CLHERL
Trigger: CAGCCGCTCGTGCAGACACCAGTGTCTGGACAGGAA...CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp CCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGCACTTCCTGTCCAGACACTaGTGTCTGCACGAGCGGCTG +
Preference number: 2 (lower is better)
Translates to: PSPACSPSSSWSPPPPPHFLSRH*CLHERL
Trigger: CAGCCGCTCGTGCAGACACCAGTGTCTGGACAGGAA...GTGCGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR TCA 90 bp ACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTGAGACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: TPRGRGRCSLTLRAWLFETVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
3UTR-3UTR TCA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGESLRSE*HRRRCG
Trigger: GCCACAGCGACGCCTATGTCATTCGGATCTGAGGCT...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR GCA 90 bp GGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: GLALPHGLKASLRNRTWRKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...CCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CCA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGAGCCCATCGTCAAGTTaGTCTCCACCGCCACCACCG +
Preference number: 2 (lower is better)
Translates to: ALPHGLKASLRNRTWRPESPSSS*SPPPPP
Trigger: CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCT...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR GCA 90 bp ACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATGACACGGCTCCCCTCAGCCTaGTCCGTGATGCTCCACCTG +
Preference number: 2 (lower is better)
Translates to: TATLAVVSSFGEPQIRMTRLPSA*SVMLHL
Trigger: CAGGTGGAGCATCACGGAGCAGGCTGAGGGGAGCCG...TGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR CCA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: ALPHGLKASLRNRTWRPEIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CCA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGGGGGAAGCAGGAGGCTaGGGACAGTCCCCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: PDSESEGQEAGKETTVLPGEAGG*GQSPSS
Trigger: GCTGGAGGGGGACTGTCCCCAGCCTCCTGCTTCCCC...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGAGGTATGCAGAGCTGTaGGACAGGGAGCATCTGGAG +
Preference number: 2 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGERYAEL*DREHLE
Trigger: CTCCAGATGCTCCCTGTCCCACAGCTCTGCATACCT...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp TTCCTTTCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCAGGTCCTGGGGGCCCTaGGACGTCCATCTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: FLSIQVLSLSTSAPGSGSRSWGP*DVHLEK
Trigger: CTTTTCCAGATGGACGTCCCAGGGCCCCCAGGACCT...GGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGAAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR CCA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAAT +
Preference number: 2 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGERRVLV*GASDPN
Trigger: ATTCGGATCTGAGGCTCCCCAAACGAGGACACGACG...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR CAA 90 bp GACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTaGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTC +
Preference number: 2 (lower is better)
Translates to: DEKTPWTTRYGSIAG*AELGHDVRPLGRRV
Trigger: GACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
3UTR-3UTR TCA 90 bp AGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 2 (lower is better)
Translates to: SCAHRLTIRTPIGQNSGPEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...GGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR GCA 90 bp CATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 2 (lower is better)
Translates to: HHSQLALRWLQAEDSMRLEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...GAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
3UTR-3UTR CCA 90 bp TTCCTTTCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 2 (lower is better)
Translates to: FLSIQVLSLSTSAPGSGSTTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...GGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGAAAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp AGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCAGGAGAACCCCTGTGTaGGACAGGCACTTGCACACA +
Preference number: 2 (lower is better)
Translates to: SCAHRLTIRTPIGQNSGPRRTPV*DRHLHT
Trigger: TGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT...GGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp GCTCTGACTTCCCCACACAAAACTCTTCCGTCAAGCCAATGCGCATCTCAGAGCACAGGACGGGGCGGCTaGCTGCACTGCTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: ALTSPHKTLPSSQCASQSTGRGG*LHCWGP
Trigger: TGGCCCCCAGCAGTGCAGCCAGCCGCCCCGTCCTGT...GCTCTGAGATGCGCATTGGCTTGACGGAAGAGTTTTGTGTGGGGAAGTCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR TCA 90 bp CTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTCAAGCGGGAGTGCACTaGTGCAACCTCTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LTIRTPIGQNSGPLGPSSQAGVH*CNLCSL
Trigger: CAGTGAGCAGAGGTTGCATCAGTGCACTCCCGCTTG...AGAGGAGGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR TCA 90 bp GGGACAGGGAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 2 (lower is better)
Translates to: GTGSIWRAWVTSEHPGEARFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...GGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR TCA 90 bp CACTTGTGGGGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 2 (lower is better)
Translates to: HLWGLALPHGLKASLRNRKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...CCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR GCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: GLGTEDSSCPDSESEGQEKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR GCA 90 bp GGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGGTGCACGTACACACATaGATGCTCGCTAAGCGGAAG +
Preference number: 2 (lower is better)
Translates to: GLALPHGLKASLRNRTWRVHVHT*MLAKRK
Trigger: CTTCCGCTTAGCGAGCATGCATGTGTGTACGTGCAC...CCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR GCA 90 bp GAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTACCGGATTCCCACACATaGAGACATGTACACACGTGC +
Preference number: 2 (lower is better)
Translates to: EHLEGLGYLRAPWGGPGVPDSHT*RHVHTC
Trigger: GCACGTGTGTACATGTCTGCATGTGTGGGAATCCGG...TACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp CATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: HHSQLALRWLQAEDSMRLRGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...GAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
3UTR-3UTR GCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCGCGAAGGGCTCCCTCTaGCAGCTCAGCCTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: STAVLPASDTTERLGPLPAKGSL*QLSLLL
Trigger: GAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGC...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CCA 90 bp GTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTAGCCCATCGTCAAGTTaGTCTCCACCGCCACCACCG +
Preference number: 2 (lower is better)
Translates to: VLPASDTTERLGPLPPPGSPSSS*SPPPPP
Trigger: CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCT...ACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp AAGCAGAGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCGAGCACAGTCCCCTCTaGGCCCCAAGTCAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: KQRRTPVWDRHLHTATCAEHSPL*APSQEL
Trigger: CAGCTCTTGACTTGGGGCCCAGAGGGGACTGTGCTC...GGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp GACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 2 (lower is better)
Translates to: DHPSRQGEVQPDIEGLALRSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...AAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
3UTR-3UTR GCA 90 bp CACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCACGTACACACATGCATaGTCGCTAAGCGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: HRLTIRTPIGQNSGPLGPTYTHA*SLSGRK
Trigger: CTTCCTTCCGCTTAGCGAGCATGCATGTGTGTACGT...GGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp GGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGGTACAGGGCAAGCGGCCTaGCTTTCCTTTCTATCCAGG +
Preference number: 2 (lower is better)
Translates to: GCSAGSAGQQDHSDHHAGTGQAA*LSFLSR
Trigger: CCTGGATAGAAAGGAAAGGCAGGCCGCTTGCCCTGT...ACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp AAGCAGAGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTGTTCTGGCAAAGCTaGGCCCACCGCCTGACAATC +
Preference number: 2 (lower is better)
Translates to: KQRRTPVWDRHLHTATCALFWQS*AHRLTI
Trigger: GATTGTCAGGCGGTGGGCGCAGCTTTGCCAGAACAG...GGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGCCTTCTGCTCTGGGCTaGTCAGCTCCTGAGACAGGC +
Preference number: 2 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLPSALG*SAPETG
Trigger: GCCTGTCTCAGGAGCTGAGCAGCCCAGAGCAGAAGG...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CCA 90 bp GGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGGTGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 2 (lower is better)
Translates to: GCSAGSAGQQDHSDHHAGDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...ACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp GTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 2 (lower is better)
Translates to: VLPASDTTERLGPLPPPGTTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...ACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR CCA 90 bp ACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 2 (lower is better)
Translates to: TTPRGRGRCSLTLRAWLFRSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...AAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
3UTR-3UTR CCA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCAGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPVGIAA*PEGQPE
Trigger: CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR CAA 90 bp AGGTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTaGTTCAGGCAGGGAGCGAGTGAAGCGTCCTCGCCAGGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RSPAIAVYRVNYRNN*FRQGASEASSPGLW
Trigger: CCAGAGGCCTGGCGAGGACGCTTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CAA 90 bp GGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATGACA +
Preference number: 2 (lower is better)
Translates to: GWKRNDCPPVGQTAT*AVVSSFGEPQIRMT
Trigger: TGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR TCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: STAVLPASDTTERLGPLPSWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR TCA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGSWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR TCA 90 bp GAGTTCGTATACCAGAGCCACATTGCGGGAGATGGTCCCCTCGCCCAGGGAGCCGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: EFVYQSHIAGDGPLAQGAAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...GGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR-3UTR TCA 90 bp GTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGCTCCTGAGACAGGCTaGCCACCCCTCGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: VSSHSCLQGELQEQLVQAAPETG*PPLEAG
Trigger: CCCTGCCTCGAGGGGTGGTCAGCCTGTCTCAGGAGC...TGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR TCA 90 bp CCTGGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 2 (lower is better)
Translates to: PGLGTEDSSCPDSESEGQKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...CTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR TCA 90 bp GGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTCCATCTGGAAAAGGCCTaGGAGTTGAGAGCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: GEPLCGTGTCTQPHVPSVHLEKA*ELRASL
Trigger: CAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATG...GACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR GCA 90 bp ACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAA +
Preference number: 2 (lower is better)
Translates to: TTPRGRGRCSLTLRAWLFTEDSS*PDSESE
Trigger: TTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGT...AAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR GCA 90 bp GGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGGTGTGCACGTACACACATaGATGCTCGCTAAGCGGAAG +
Preference number: 2 (lower is better)
Translates to: GCSAGSAGQQDHSDHHAGVHVHT*MLAKRK
Trigger: CTTCCGCTTAGCGAGCATGCATGTGTGTACGTGCAC...ACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGCAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 2 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLTTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR CCA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCAATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR CCA 90 bp GGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTCTGCTCCCTCTGGTCCTaGGAGTGTCCAGAAGTACAT +
Preference number: 2 (lower is better)
Translates to: GEPLCGTGTCTQPHVPSVCSLWS*ECPEVH
Trigger: ATGTACTTCTGGACACTCCCAGGACCAGAGGGAGCA...GACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp CAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTCTGAGGAATCGGACCTaGAGGCCAGAGCACGTGTGC +
Preference number: 2 (lower is better)
Translates to: QIQSPKARRLEKKRLSSRLRNRT*RPEHVC
Trigger: GCACACGTGCTCTGGCCTCCAGGTCCGATTCCTCAG...ACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR CAA 90 bp TCCGTCAAGCCAATGCGCATCTCAGAGCCGCTAGGAAGGAAGCTCTaGAGCCGAATCTCTCCCTGCACATCCACCTTCAGCAGGGATCCA +
Preference number: 2 (lower is better)
Translates to: SVKPMRISEPLGRKL*SRISPCTSTFSRDP
Trigger: TGGATCCCTGCTGAAGGTGGATGTGCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGAGATGCGCATTGGCTTGACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR GCA 90 bp AACCTCTGCTCACTGCAGCCTCCACCACCTGGGTTCAAGCATTCTAGTACCTCAAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: NLCSLQPPPPGFKHSSTSKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...TGAGGTACTAGAATGCTTGAACCCAGGTGGTGGAGGCTGCAGTGAGCAGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp CATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 2 (lower is better)
Translates to: HHSQLALRWLQAEDSMRLDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...GAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR CAA 90 bp GCCCCAAACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTCTGGATGAAATTCCTCAGCATCTCC +
Preference number: 2 (lower is better)
Translates to: APNKPTLLRSKRLKG*LTTASVWMKFLSIS
Trigger: GGAGATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR-3UTR GCA 90 bp AGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAATTCTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTC +
Preference number: 2 (lower is better)
Translates to: RSKRLKGLLTTASVWMKFSRGTN*HLGRRV
Trigger: GACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGA...GAATTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR GCA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAA +
Preference number: 2 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSTEDSS*PDSESE
Trigger: TTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGT...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR GCA 90 bp CTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAATGCTGGGGGCCACTTTaGTCTGTTGTGTCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: LRSKRLKGLLTTASVWMKCWGPL*SVVSQP
Trigger: GGGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCA...TTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR GCA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTC +
Preference number: 2 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWSRGTN*HLGRRV
Trigger: GACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGA...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR CCA 90 bp GCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTGAAATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: AVYRVNYRNNLFRQGASEIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...TTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp CATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: HSCLQGELQEQLVQAGSEIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...CTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp CAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTTGCTCCCTCTGGTCCTaGGAGTGTCCAGAAGTACAT +
Preference number: 2 (lower is better)
Translates to: QIQSPKARRLEKKRLSSRCSLWS*ECPEVH
Trigger: ATGTACTTCTGGACACTCCCAGGACCAGAGGGAGCA...ACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp TGTGACCACCAAATAGAGGCCGCTGTGTCTGATGTGAATGAAATGACGGCCATGCTCTGTCTCCCAGGCTaGAGTGCGGTGTCCGGATCT +
Preference number: 2 (lower is better)
Translates to: CDHQIEAAVSDVNEMTAMLCLPG*SAVSGS
Trigger: AGATCCGGACACCGCACTCCAGCCTGGGAGACAGAG...CATGGCCGTCATTTCATTCACATCAGACACAGCGGCCTCTATTTGGTGGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR-3UTR CCA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCTGACATTGAGGGCTTaGCTCTTTGAGAGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGLTLRA*LFESRS
Trigger: TGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAG...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR GCA 90 bp CATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGCAGAGCTGTGGGACAGGAAGGAAGTTGTAGATTaGTTCCTTCATGTCACTTTC +
Preference number: 2 (lower is better)
Translates to: HRPPAPHPPSRYAELWDRKEVVD*FLHVTF
Trigger: GAAAGTGACATGAAGGAAGCAATCTACAACTTCCTT...CCTGTCCCACAGCTCTGCATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp ACAGCTTCCGTCTGGATGAAATTCCTCAGCATCTCCGTGGATGTGGTCTGTACAATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGC +
Preference number: 2 (lower is better)
Translates to: TASVWMKFLSISVDVVCTIPEPH*GRWSPR
Trigger: GCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTAT...TGTACAGACCACATCCACGGAGATGCTGAGGAATTTCATCCAGACGGAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR-3UTR TCA 90 bp ACAAGGTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: TRSPAIAVYRVNYRNNLFSWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...GAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGACCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR TCA 90 bp AACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 2 (lower is better)
Translates to: NKPTLLRSKRLKGLLTTARFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...AGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR GCA 90 bp CAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGCCGGATTCCCACACATaGAGACATGTACACACGTGC +
Preference number: 2 (lower is better)
Translates to: QVYCNVIVLQRPIHPAGMPDSHT*RHVHTC
Trigger: GCACGTGTGTACATGTCTGCATGTGTGGGAATCCGG...CATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTACAATAAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp CTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAAGCTCACTGCAACCTCTaGCTCTTGGATTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: LRSKRLKGLLTTASVWMKAHCNL*LLDSSD
Trigger: ATCGCTTGAATCCAAGAGGCAGAGGTTGCAGTGAGC...TTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR-3UTR CCA 90 bp AGCCTGACATTGAGGGCTTGGCTCTTTGAGAGCAGGTCACATCGCAACTTTAGAGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 2 (lower is better)
Translates to: SLTLRAWLFESRSHRNFRDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...TCTAAAGTTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CCA 90 bp AACCTCTGCTCACTGCAGCCTCCACCACCTGGGTTCAAGCATTCTAGTACCTCATCCAGAAGTACATCGTaGTCTCACTTCCCCCAACAG +
Preference number: 2 (lower is better)
Translates to: NLCSLQPPPPGFKHSSTSSRSTS*SHFPQQ
Trigger: CTGTTGGGGGAAGTGAGACCACGATGTACTTCTGGA...TGAGGTACTAGAATGCTTGAACCCAGGTGGTGGAGGCTGCAGTGAGCAGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp GCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTGAAAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 2 (lower is better)
Translates to: AVYRVNYRNNLFRQGASERSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...TTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR TCA 90 bp AACCTCTGCTCACTGCAGCCTCCACCACCTGGGTTCAAGCATTCTAGTACCTCATTGGTTTGTAAGTTCTaGTCCACTGCAGTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: NLCSLQPPPPGFKHSSTSLVCKF*STAVLP
Trigger: AGGAAGGACTGCAGTGGATCAGAACTTACAAACCAA...TGAGGTACTAGAATGCTTGAACCCAGGTGGTGGAGGCTGCAGTGAGCAGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CCA 90 bp AACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTAAAACTTCATTCTTTTaGCTCTGGTCAGAGCGACTG +
Preference number: 2 (lower is better)
Translates to: NKPTLLRSKRLKGLLTTAKTSFF*LWSERL
Trigger: CAGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTT...AGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR TCA 90 bp AAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCATCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: KVWFVSSDPLQSFLHQIPSWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...TGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR GCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTC +
Preference number: 2 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQSRGTN*HLGRRV
Trigger: GACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGA...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR GCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATAAGGCCAGAGCACGTGTaGCGGGGAAGCTCGAAGGAG +
Preference number: 2 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQIRPEHV*RGSSKE
Trigger: CTCCTTCGAGCTTCCCCGGCACACGTGCTCTGGCCT...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CCA 90 bp ACAAGGTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCTCCAGAAGTACATCGTaGTCTCACTTCCCCCAACAG +
Preference number: 2 (lower is better)
Translates to: TRSPAIAVYRVNYRNNLFSRSTS*SHFPQQ
Trigger: CTGTTGGGGGAAGTGAGACCACGATGTACTTCTGGA...GAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGACCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR GCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATAAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQIKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR CCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 2 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR TCA 90 bp TCTGTACATAGCCATAGTCCAGCACTTCATCCAGGAGTTCGTATACCAGAGCCAGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 2 (lower is better)
Translates to: SVHSHSPALHPGVRIPEPGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...TGGCTCTGGTATACGAACTCCTGGATGAAGTGCTGGACTATGGCTATGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR-3UTR CCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATAGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 2 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQIDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR CAA 90 bp CCCAGCCCCAGAGGAGAGGCCGAGGTGGAGAGCCCATGGCTGGGAGGTCCTGGGAGGTGTCGCACCCACTaGTGGGGGTTGGCATTGCCG +
Preference number: 3 (lower is better)
Translates to: PSPRGEAEVESPWLGGPGRCRTH*WGLALP
Trigger: CGGCAATGCCAACCCCCACAAGTGGGTGCGACACCT...CCCAGGACCTCCCAGCCATGGGCTCTCCACCTCGGCCTCTCCTCTGGGGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CAA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGCCTCGCACCCCTGGCTaGCTGAAGGTTCCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGEPRTPG*LKVPGS
Trigger: GGAGCCAGGAACCTTCAGCAAGCCAGGGGTGCGAGG...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR GCA 72 bp CCACCACTTCGCCCGTCACCACCACCGTCCCCAGCGTaGAGCCCATCGTCAAGTTGGTCTCCACCGCCACCA +
Preference number: 3 (lower is better)
Translates to: PPLRPSPPPSPA*SPSSSWSPPPP
Trigger: TGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGGTGGTGGTGACGGGCGAAGTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp GGGACAGGGAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 3 (lower is better)
Translates to: GTGSIWRAWVTSEHPGEACPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...GGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp CATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGCAGAGCTGTGGGACAGGGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: HRPPAPHPPSRYAELWDRERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...CCTGTCCCACAGCTCTGCATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp GTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: VGIAAWPEGQPEESDLEAERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...GGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CAA 90 bp GGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTAGAGCACAGTCCCTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: GLGYLRAPWGGPGVEHSPLWGLA*PHGLKA
Trigger: GGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAA...GGGACTGTGCTCTACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR TCA 72 bp CTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTaGCCATCACGCAGGTCCGTGGCCGGGTGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LLCRLSRSTGPL*PSRRSVAGWGG
Trigger: TCCTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR GCA 72 bp TGGCTCCATCGCACTTCCTGTCCAGACACTGGTGTCTaGACGAGCGGCTGCCCCACCACAGCCTTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: WLHRTSCPDTGV*TSGCPTTAFPS
Trigger: GGAGGGGAAGGCTGTGGTGGGGCAGCCGCTCGTGCAGACACCAGTGTCTGGACAGGAAGTGCGATGGAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR GCA 72 bp CCTCTGCTCCCAGGTGGTCAAGGCTCGGGCCCAGGCTaGTCTGCAGGCTCAGCAGGTCAACAGGACCACTCT +
Preference number: 3 (lower is better)
Translates to: PLLPGGQGSGPG*SAGSAGQQDHS
Trigger: AGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGCAGCCTGGGCCCGAGCCTTGACCACCTGGGAGCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CCA 72 bp ATGCAGAGCTGTGGGACAGGGAGCATCTGGAGGGCCTaGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: MQSCGTGSIWRA*VTSEHPGEAQE
Trigger: CTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCCACAGCTCTGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp GGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTAGAGCACAGTCCCTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 3 (lower is better)
Translates to: GLGYLRAPWGGPGVEHSPCPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...GGGACTGTGCTCTACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp CACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCCAGCCCATCGTCAAGTaGGTCTCCACCGCCACCACC +
Preference number: 3 (lower is better)
Translates to: HRLTIRTPIGQNSGPLGPQPIVK*VSTATT
Trigger: GGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTG...GGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR TCA 72 bp GGCCCTGGGACGTCCATCTGGAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGAGGCAGGTCCCAGCGA +
Preference number: 3 (lower is better)
Translates to: GPGTSIWKRPES*EPPCTRGRSQR
Trigger: TCGCTGGGACCTGCCTCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATGGACGTCCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR CCA 72 bp CCAGCAGGTATGCAGAGCTGTGGGACAGGGAGCATCTaGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: PAGMQSCGTGSI*RAWVTSEHPGE
Trigger: CTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCCACAGCTCTGCATACCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CCA 72 bp GTGTCGCACCCACTTGTGGGGGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAG +
Preference number: 3 (lower is better)
Translates to: VSHPLVGVGIAA*PEGQPEESDLE
Trigger: CTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CAA 90 bp GTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 3 (lower is better)
Translates to: VGIAAWPEGQPEESDLEACPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...GGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CAA 90 bp CAAAGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCTCGCACCCCTGGCTaGCTGAAGGTTCCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: QSCAHRLTIRTPIGQNSGPRTPG*LKVPGS
Trigger: GGAGCCAGGAACCTTCAGCAAGCCAGGGGTGCGAGG...ACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp GACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTCTGCTGGGGGCCACTTaGCTCTGTTGTGTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: DHPSRQGEVQPDIEGLALLLGAT*LCCVSA
Trigger: GGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCAG...AAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR CAA 90 bp GTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: VLPASDTTERLGPLPPPGERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...ACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR CAA 90 bp TGGCAAAGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGCAGCCCATCGTCAAGTaGGTCTCCACCGCCACCACC +
Preference number: 3 (lower is better)
Translates to: WQSCAHRLTIRTPIGQNSQPIVK*VSTATT
Trigger: GGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTG...CGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CCA 72 bp AGGTTCCTGGCTCCATCGCACTTCCTGTCCAGACACTaGTGTCTGCACGAGCGGCTGCCCCACCACAGCCTT +
Preference number: 3 (lower is better)
Translates to: RFLAPSHFLSRH*CLHERLPHHSL
Trigger: AAGGCTGTGGTGGGGCAGCCGCTCGTGCAGACACCAGTGTCTGGACAGGAAGTGCGATGGAGCCAGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CCA 72 bp CGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTaGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: RPGRLVMAPSQA*LSWDTMLGLLA
Trigger: GGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
3UTR-3UTR CAA 90 bp AGGCGTCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGGGGTTGGCATTGCCGCCTAGGAAGGAAGCTCTaGAGCCGAATCTCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: RRRCGLGVAPTCGGWHCRLGRKL*SRISPC
Trigger: GCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAG...GCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCACAGCGACGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR TCA 72 bp CCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGCTTAGGTGTCGCACCC +
Preference number: 3 (lower is better)
Translates to: PSCPRLGSLRSE*HRRRCGLGVAP
Trigger: GGGTGCGACACCTAAGCCACAGCGACGCCTATGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR GCA 72 bp TTGCCCCCTCCTGGTCTTGGGACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: LPPPGLGTEDSS*PDSESEGQEAG
Trigger: TCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR GCA 72 bp CAAGTCAAGAGCTGGAAGAGGCGCCCACCAGGGTCCTaGAGGGCTGTAGCTGCCCTGCATGAACAAGGTCTC +
Preference number: 3 (lower is better)
Translates to: QVKSWKRRPPGS*RAVAALHEQGL
Trigger: GAGACCTTGTTCATGCAGGGCAGCTACAGCCCTGCAGGACCCTGGTGGGCGCCTCTTCCAGCTCTTGACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR GCA 72 bp CCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTaGCCTCAGTCAGTAGTCTCAGGGCAACCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: PCVGQALAHSHM*PQSVVSGQPGP
Trigger: AGGGCCTGGTTGCCCTGAGACTACTGACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CCA 72 bp GGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGT +
Preference number: 3 (lower is better)
Translates to: GQEAGKETTVLP*DKLPPWPSCPR
Trigger: ACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR CCA 72 bp GAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCC +
Preference number: 3 (lower is better)
Translates to: ETTVLPWDKLPP*PSCPRLGSLRS
Trigger: GGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR CCA 72 bp CGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTaGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCC +
Preference number: 3 (lower is better)
Translates to: RLVMAPSQAWLS*DTMLGLLAVVS
Trigger: GGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
3UTR-3UTR CAA 90 bp ACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATGACACTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATG +
Preference number: 3 (lower is better)
Translates to: TATLAVVSSFGEPQIRMTLALRW*QAEDSM
Trigger: CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAG...TGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR-3UTR CAA 90 bp CGTCCATCTGGAAAAGGCCTGAGAGTTGAGAGCCTCCTTGCACCCGAGGCAGGTCCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 3 (lower is better)
Translates to: RPSGKGLRVESLLAPEAGPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...ACCTGCCTCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR GCA 72 bp CTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCC +
Preference number: 3 (lower is better)
Translates to: LEKKRLSSRGTN*HLGRRVLVWGA
Trigger: GGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR GCA 72 bp GCACTTCATCCAGGAGTTCGTATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGCCCAGGGAGCCACAGT +
Preference number: 3 (lower is better)
Translates to: ALHPGVRIPEPH*GRWSPRPGSHS
Trigger: ACTGTGGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGATGAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR CCA 72 bp CTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTGGTCTTGGGACTGAGG +
Preference number: 3 (lower is better)
Translates to: LQSFLHQIPQKG*AHCPLLVLGLR
Trigger: CCTCAGTCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR CCA 72 bp GGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAATGACATAGGCGTCGCT +
Preference number: 3 (lower is better)
Translates to: GTNCHLGRRVLV*GASDPNDIGVA
Trigger: AGCGACGCCTATGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR CCA 72 bp TTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTaGACGACTCGTTATGGCTCCATCGCAGGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: FPLQSWVDEKTP*TTRYGSIAGLA
Trigger: AGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
3UTR-3UTR CAA 90 bp CTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: LTIRTPIGQNSGPLGPSSRCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...AGAGGAGGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR CAA 90 bp CAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTG +
Preference number: 3 (lower is better)
Translates to: QIQSPKARRLEKKRLSSRTHLWG*ALPHGL
Trigger: CAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGT...ACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
3UTR GCA 72 bp TTCTGCAGAAACACTGTGCTCCTGTTCTGGCAAAGCTaGGCCCACCGCCTGACAATCAGGACGCCTATCGGG +
Preference number: 3 (lower is better)
Translates to: FCRNTVLLFWQS*AHRLTIRTPIG
Trigger: CCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTGCCAGAACAGGAGCACAGTGTTTCTGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp CCTGGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGGCCACTTTGCTCTGTaGTGTCTCAGCCCCAAACAA +
Preference number: 3 (lower is better)
Translates to: PGLGTEDSSCPDSESEGQGHFAL*CLSPKQ
Trigger: TTGTTTGGGGCTGAGACACAACAGAGCAAAGTGGCC...CTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR CAA 90 bp CAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTG +
Preference number: 3 (lower is better)
Translates to: QVYCNVIVLQRPIHPAGMTHLWG*ALPHGL
Trigger: CAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGT...CATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTACAATAAACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR GCA 72 bp CCCAAGCGGGAGTGCACTGATGCAACCTCTGCTCACTaGAGCCTCCACCACCTGGGTTCAAGCATTCTAGTA +
Preference number: 3 (lower is better)
Translates to: PKRECTDATSAH*SLHHLGSSILV
Trigger: TACTAGAATGCTTGAACCCAGGTGGTGGAGGCTGCAGTGAGCAGAGGTTGCATCAGTGCACTCCCGCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTT +
Preference number: 3 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHGQTAT*AVVSSF
Trigger: AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCC...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
3UTR-3UTR CAA 90 bp AAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAATTCCTCAGCATCTCCGTGTATACCAGAGCCACATaGCGGGAGATGGTCCCCTCG +
Preference number: 3 (lower is better)
Translates to: KGLLTTASVWMKFLSISVYTRAT*REMVPS
Trigger: CGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA...CACGGAGATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR-3UTR CAA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGAACTACAGGAACAACTaGTTCAGGCAGGGAGCGAGT +
Preference number: 3 (lower is better)
Translates to: PDSESEGQEAGKETTVLPNYRNN*FRQGAS
Trigger: ACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTT...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CCA 72 bp AAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATCTCCGTGGATGTGGTC +
Preference number: 3 (lower is better)
Translates to: KRLKGLLTTASV*MKFLSISVDVV
Trigger: GACCACATCCACGGAGATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR-3UTR CAA 90 bp AGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTATAGTTCAGCATAATTaGGCCTTCAACAGGGGCACT +
Preference number: 3 (lower is better)
Translates to: RRTPVWDRHLHTATCALSIVQHN*AFNRGT
Trigger: AGTGCCCCTGTTGAAGGCCAAATTATGCTGAACTAT...ACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR-3UTR CAA 90 bp ACAAGGTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCCCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 3 (lower is better)
Translates to: TRSPAIAVYRVNYRNNLFPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...GAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGACCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
3UTR-3UTR CAA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCAAAAACTTCATTCTTTaGGCTCTGGTCAGAGCGACT +
Preference number: 3 (lower is better)
Translates to: STAVLPASDTTERLGPLPKNFIL*ALVRAT
Trigger: AGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTTT...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445208.5
3UTR-3UTR CAA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATATGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 3 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQICPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp CCACCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGACAGGACGGGGCGGCTaGCTGCACTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPSPACSPSSSWSPPPPPTGRGG*LHCWGP
Trigger: TGGCCCCCAGCAGTGCAGCCAGCCGCCCCGTCCTGT...CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGGGGGAAGCAGGAGGCTaGGGACAGTCCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGEGEAGG*GQSPSS
Trigger: GCTGGAGGGGGACTGTCCCCAGCCTCCTGCTTCCCC...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp GAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTAGCTCCTGAGACAGGCTaGCCACCCCTCGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EHLEGLGYLRAPWGGPGVAPETG*PPLEAG
Trigger: CCCTGCCTCGAGGGGTGGTCAGCCTGTCTCAGGAGC...TACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGCAGAGCTGTGGGACAGGGCTCCTGAGACAGGCTaGCCACCCCTCGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRPPAPHPPSRYAELWDRAPETG*PPLEAG
Trigger: CCCTGCCTCGAGGGGTGGTCAGCCTGTCTCAGGAGC...CCTGTCCCACAGCTCTGCATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp ACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATGACAAGCCCCGGCCCACGCTaGCCCTCTCGCAGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TATLAVVSSFGEPQIRMTSPGPR*PSRRPH
Trigger: GTGGGGCCTGCGAGAGGGTCAGCGTGGGCCGGGGCT...TGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR TCA 90 bp CACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCAGGGCAACCAGGCCCTaGGTGAGGATGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRLTIRTPIGQNSGPLGPRATRP*VRMPQP
Trigger: GGGCTGGGGCATCCTCACTCAGGGCCTGGTTGCCCT...GGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGEEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGCGGCTCCCCTCAGCCTaGTCCGTGATGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGERLPSA*SVMLHL
Trigger: CAGGTGGAGCATCACGGAGCAGGCTGAGGGGAGCCG...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp CCAGCTCCAGGGACTCCAAAAGCCAATGGCTCCCAGCCCAACTCCGGCTCCCCTCGCCCACCAGGGTCCTaGAGGGCTGTAGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PAPGTPKANGSQPNSGSPRPPGS*RAVAAL
Trigger: CAGGGCAGCTACAGCCCTGCAGGACCCTGGTGGGCG...AGGGGAGCCGGAGTTGGGCTGGGAGCCATTGGCTTTTGGAGTCCCTGGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp GGCTCCATCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCCGGAAGGGGAGCGGTaGGGGGAGGTCATCGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSIAGLAELGHDVRPLGRPEGER*GEVIGE
Trigger: CTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGG...ACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp GGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGCCGGAAGGGGAGCGGTaGGGGGAGGTCATCGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSGEGRSSESWYRITVSSPEGER*GEVIGE
Trigger: CTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGG...CGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp GGCTCCATCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTGCTCCTGAGACAGGCTaGCCACCCCTCGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSIAGLAELGHDVRPLGRAPETG*PPLEAG
Trigger: CCCTGCCTCGAGGGGTGGTCAGCCTGTCTCAGGAGC...ACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp AGGCGTCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGGGGTTGGCATTGCCGCGGGCTGCTCAGCTCCTaGGACAGGCTGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: RRRCGLGVAPTCGGWHCRGLLSS*DRLTTP
Trigger: AGGGGTGGTCAGCCTGTCTCAGGAGCTGAGCAGCCC...GCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCACAGCGACGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp AGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGCCCAGGGCAACCAGGCCCTaGGTGAGGATGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGEGRSSESWYRITVSSPRATRP*VRMPQP
Trigger: GGGCTGGGGCATCCTCACTCAGGGCCTGGTTGCCCT...GGGCGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR GCA 90 bp GGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLALPHGLKASLRNRTWREPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...CCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGCACAGGTCCTGGGGGCCCTaGGACGTCCATCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PSPACSPSSSWSPPPPPHRSWGP*DVHLEK
Trigger: CTTTTCCAGATGGACGTCCCAGGGCCCCCAGGACCT...GTGCGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp ACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGGAGGTGGAGAGCCCATaGCTGGGAGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TVLPWDKLPPWPSCPRLGEVESP*LGGPGG
Trigger: GCCCCCAGGACCTCCCAGCCATGGGCTCTCCACCTC...CCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACCACCCCCCAAGTCAAGAGCTaGAAGAGGCGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SIQVLSLSTSAPGSGSTTPQVKS*KRRPPG
Trigger: CCCTGGTGGGCGCCTCTTCCAGCTCTTGACTTGGGG...GGTGGTGGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGCACGGAAGTCTTTGTAGATaGGCGGGTCCCCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PSPACSPSSSWSPPPPPHGSLCR*AGPPWR
Trigger: CCTCCAAGGGGGACCCGCTCATCTACAAAGACTTCC...GTGCGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359593.9
CDS-3UTR TCA 90 bp CTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTCAGGCAGGGAGCGAGTaGAGCGTCCTCGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LTIRTPIGQNSGPLGPSSQAGSE*SVLARP
Trigger: AGGCCTGGCGAGGACGCTTCACTCGCTCCCTGCCTG...AGAGGAGGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTAGCCCCGGCCCACGCTaGCCCTCTCGCAGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPRFRVRRPGGWKRNDCPSPGPR*PSRRPH
Trigger: GTGGGGCCTGCGAGAGGGTCAGCGTGGGCCGGGGCT...AGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp AGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGCCCGGCGGCTGGCTGCACTaGTGGGGGCCACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGEGRSSESWYRITVSSPGGWLH*WGPLCS
Trigger: AGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCC...GGGCGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR GCA 90 bp CGGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCGGCGGCTGGCTGCACTaGTGGGGGCCACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RKGSGEGRSSESWYRITVGGWLH*WGPLCS
Trigger: AGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCC...GACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR GCA 90 bp GTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VLPWDKLPPWPSCPRLGSRGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...GCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp CACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCGCGAAGGGCTCCCTCTaGCAGCTCAGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HRLTIRTPIGQNSGPLGPAKGSL*QLSLLL
Trigger: GAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGC...GGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCGCGAAGGGCTCCCTCTaGCAGCTCAGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLPWDKLPPWPSCPRLGSAKGSL*QLSLLL
Trigger: GAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGC...GCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TGGCAAAGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGTCTGCACGAGCGGCTaGCCCACCACAGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: WQSCAHRLTIRTPIGQNSVCTSG*PTTAFP
Trigger: GGGGAAGGCTGTGGTGGGGCAGCCGCTCGTGCAGAC...CGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGGGACCCACATTGCGGGAGATaGTCCCCTCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRPGRLVMAPSQAWLSWDPHCGR*SPRPGS
Trigger: GCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGG...GTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGCCCTCCACATTGCGGGAGATaGTCCCCTCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AVRGGHRRVGTASQSARPPHCGR*SPRPGS
Trigger: GCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGG...AGGGCGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000446007.5
CDS-3UTR CCA 90 bp CCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGAACAGGACGGGGCGGCTaGCTGCACTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PHHSQLALRWLQAEDSMRTGRGG*LHCWGP
Trigger: TGGCCCCCAGCAGTGCAGCCAGCCGCCCCGTCCTGT...TCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp TCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACCACCCAGCTCGCCCTGAGGTaGTTGCAAGCGGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: SIQVLSLSTSAPGSGSTTQLALR*LQAEDS
Trigger: CGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTG...GGTGGTGGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGCCCCATCACGCAGGTCCGTaGCCGGGTGGGGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SGEGRSSESWYRITVSSPHHAGP*PGGEEE
Trigger: TTCCTCCTCCCCACCCGGCCACGGACCTGCGTGATG...GGGCGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp ACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGTCCTCTGCTCCCAGGTaGTCAAGGCTCGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TVLPWDKLPPWPSCPRLGSSAPR*SRLGPR
Trigger: CCTGGGCCCGAGCCTTGACCACCTGGGAGCAGAGGA...CCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CAA 72 bp TCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLWLRCRTHLWG*ALPHGLKASLR
Trigger: CCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCACAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp TCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SQAWLSWDTMLGLLAVVSTVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...GGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp AGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTCCGGAAGGGGAGCGGTaGGGGGAGGTCATCGGAGAG +
Preference number: 4 (lower is better)
Translates to: RRTPVWDRHLHTATCALSPEGER*GEVIGE
Trigger: CTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGG...ACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp GAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGGGGCTGCTCAGCTCCTaGGACAGGCTGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: EKTPWTTRYGSIAGLAELGLLSS*DRLTTP
Trigger: AGGGGTGGTCAGCCTGTCTCAGGAGCTGAGCAGCCC...CAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp TGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGGGCGGCTGGCTGCACTaGTGGGGGCCACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WTRRRPGRLVMAPSQAWLGGWLH*WGPLCS
Trigger: AGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCC...CAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp ACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TTPRGRGRCSLTLRAWLFRGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...AAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR GCA 90 bp TCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCGCGAAGGGCTCCCTCTaGCAGCTCAGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SQAWLSWDTMLGLLAVVSAKGSL*QLSLLL
Trigger: GAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGC...GGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp CAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCTCGAGGCCAGAGCACGTGTaGCGGGGAAGCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QAWLSWDTMLGLLAVVSSRPEHV*RGSSKE
Trigger: CTCCTTCGAGCTTCCCCGGCACACGTGCTCTGGCCT...CGAGGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp AGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTGTCTGCACGAGCGGCTaGCCCACCACAGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RRTPVWDRHLHTATCALSVCTSG*PTTAFP
Trigger: GGGGAAGGCTGTGGTGGGGCAGCCGCTCGTGCAGAC...ACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGGCTCGGGCCCAGGCTaGTCTGCAGGCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLGTEDSSCPDSESEGQEGSGPG*SAGSAG
Trigger: ACCTGCTGAGCCTGCAGAGCAGCCTGGGCCCGAGCC...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGCTGTTCTGGCAAAGCTaGGCCCACCGCCTGACAATC +
Preference number: 4 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGELFWQS*AHRLTI
Trigger: GATTGTCAGGCGGTGGGCGCAGCTTTGCCAGAACAG...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTACAGGCCTAAGATGCTaGACCTGGCCCCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: DHPSRQGEVQPDIEGLALTGLRC*TWPRAH
Trigger: ATGGGCACGGGGCCAGGTGCAGCATCTTAGGCCTGT...AAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp AGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RGAVRGGHRRVGTASQSARGLVS*QSRQLP
Trigger: CGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCG...AGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp ACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTACAGGACGGGGCGGCTaGCTGCACTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TAVLPASDTTERLGPLPPTGRGG*LHCWGP
Trigger: TGGCCCCCAGCAGTGCAGCCAGCCGCCCCGTCCTGT...AGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCACAGGACGGGGCGGCTaGCTGCACTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: HHSQLALRWLQAEDSMRLTGRGG*LHCWGP
Trigger: TGGCCCCCAGCAGTGCAGCCAGCCGCCCCGTCCTGT...GAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp ACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTCTGGTCAGAGCGACTaGACAGGACGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRRRPGRLVMAPSQAWLSSGQSD*TGRGGW
Trigger: CCAGCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGA...GCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTACAGCTCGCCCTGAGGTaGTTGCAAGCGGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: EHLEGLGYLRAPWGGPGVQLALR*LQAEDS
Trigger: CGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTG...TACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGATGGCTGGGAGGTCCTaGGGGCCCTGGGACGTCCAT +
Preference number: 4 (lower is better)
Translates to: RAGWTRRRPGRLVMAPSQMAGRS*GPWDVH
Trigger: ATGGACGTCCCAGGGCCCCCAGGACCTCCCAGCCAT...CTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTAGCCCATCGTCAAGTTaGTCTCCACCGCCACCACCG +
Preference number: 4 (lower is better)
Translates to: DHPSRQGEVQPDIEGLALSPSSS*SPPPPP
Trigger: CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCT...AAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp CACTTGTGGGGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGCCCCAAGTCAAGAGCTaGAAGAGGCGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: HLWGLALPHGLKASLRNRPQVKS*KRRPPG
Trigger: CCCTGGTGGGCGCCTCTTCCAGCTCTTGACTTGGGG...CCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp CAGCAGGTATGCAGAGCTGTGGGACAGGGAGCATCTGGAGGGCCTGGGTTACCTTCCTCTGCTCCCAGGTaGTCAAGGCTCGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QQVCRAVGQGASGGPGLPSSAPR*SRLGPR
Trigger: CCTGGGCCCGAGCCTTGACCACCTGGGAGCAGAGGA...AGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCCACAGCTCTGCATACCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TCCAGCTCCAGGGACTCCAAAAGCCAATGGCTCCCAGCCCAACTCCGGCTCCCCAGAATTCGGGTCCCTTaGGCCCCTCCTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSSRDSKSQWLPAQLRLPRIRVP*APPLLP
Trigger: TGGGAGCAGAGGAGGGGCCCAAGGGACCCGAATTCT...GGGGAGCCGGAGTTGGGCTGGGAGCCATTGGCTTTTGGAGTCCCTGGAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp AGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RGAVRGGHRRVGTASQSATVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...AGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGCCGGAAGGGGAGCGGTaGGGGGAGGTCATCGGAGAG +
Preference number: 4 (lower is better)
Translates to: PDSESEGQEAGKETTVLPPEGER*GEVIGE
Trigger: CTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGG...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCGGAAGGGGAGCGGTaGGGGGAGGTCATCGGAGAG +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLPEGER*GEVIGE
Trigger: CTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGG...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp TTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACCGGAAGGGGAGCGGTaGGGGGAGGTCATCGGAGAG +
Preference number: 4 (lower is better)
Translates to: FRVRRPGGWKRNDCPPVGPEGER*GEVIGE
Trigger: CTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGG...TCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp GTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VLPWDKLPPWPSCPRLGSSLRSE*HRRRCG
Trigger: GCCACAGCGACGCCTATGTCATTCGGATCTGAGGCT...GCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp GTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VLPWDKLPPWPSCPRLGSSWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...GCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp TCGCACCCACTTGTGGGGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SHPLVGVGIAAWPEGQPESWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR GCA 90 bp CACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTGCTGGGGGCCACTTTaGTCTGTTGTGTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRLTIRTPIGQNSGPLGPCWGPL*SVVSQP
Trigger: GGGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCA...GGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp TCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACGGCGGCTGGCTGCACTaGTGGGGGCCACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SESEGQEAGKETTVLPWDGGWLH*WGPLCS
Trigger: AGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCC...GTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp TCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SESEGQEAGKETTVLPWDEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...GTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp GTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VPHHSQLALRWLQAEDSMEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR GCA 90 bp AGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGGCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRRPGRLVMAPSQAWLSWRGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...CCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp AGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGGGACCCTTCTGCTCTGGGCTaGTCAGCTCCTGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RRPGRLVMAPSQAWLSWDPSALG*SAPETG
Trigger: GCCTGTCTCAGGAGCTGAGCAGCCCAGAGCAGAAGG...GTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp ACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTGAGTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTC +
Preference number: 4 (lower is better)
Translates to: TPRGRGRCSLTLRAWLFESRGTN*HLGRRV
Trigger: GACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGA...CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR GCA 90 bp GGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GSGEGRSSESWYRITVSSKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...CGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR GCA 90 bp GTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCCAGACACTGGTGTCTaGACGAGCGGCTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VLPASDTTERLGPLPPPGPDTGV*TSGCPT
Trigger: GGTGGGGCAGCCGCTCGTGCAGACACCAGTGTCTGG...ACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCAGGCTCGGGCCCAGGCTaGTCTGCAGGCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPGSGPG*SAGSAG
Trigger: ACCTGCTGAGCCTGCAGAGCAGCCTGGGCCCGAGCC...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp TCGCACCCACTTGTGGGGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGCTGTTCTGGCAAAGCTaGGCCCACCGCCTGACAATC +
Preference number: 4 (lower is better)
Translates to: SHPLVGVGIAAWPEGQPELFWQS*AHRLTI
Trigger: GATTGTCAGGCGGTGGGCGCAGCTTTGCCAGAACAG...CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR GCA 90 bp CCACCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGCTGCACCTGGCCCCGTaGCCATCTTTTCTTATGAGA +
Preference number: 4 (lower is better)
Translates to: PPSPACSPSSSWSPPPPPLHLAP*PSFLMR
Trigger: TCTCATAAGAAAAGATGGGCACGGGGCCAGGTGCAG...CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp CCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: PHHSQLALRWLQAEDSMRRGLVS*QSRQLP
Trigger: CGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCG...TCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp CCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCCCACATTGCGGGAGATaGTCCCCTCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PTLLRSKRLKGLLTTASVPHCGR*SPRPGS
Trigger: GCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGG...GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp TGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCACAGGACGGGGCGGCTaGCTGCACTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CPDSESEGQEAGKETTVLTGRGG*LHCWGP
Trigger: TGGCCCCCAGCAGTGCAGCCAGCCGCCCCGTCCTGT...GAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGTCTGGTCAGAGCGACTaGACAGGACGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPHHSQLALRWLQAEDSMSGQSD*TGRGGW
Trigger: CCAGCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGA...CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp ACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTGAGCAGCTCGCCCTGAGGTaGTTGCAAGCGGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: TPRGRGRCSLTLRAWLFEQLALR*LQAEDS
Trigger: CGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTG...CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp CGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCATGGCTGGGAGGTCCTaGGGGCCCTGGGACGTCCAT +
Preference number: 4 (lower is better)
Translates to: RRPGGWKRNDCPPVGQTAMAGRS*GPWDVH
Trigger: ATGGACGTCCCAGGGCCCCCAGGACCTCCCAGCCAT...GGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGGAGGTGGAGAGCCCATaGCTGGGAGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLEVESP*LGGPGG
Trigger: GCCCCCAGGACCTCCCAGCCATGGGCTCTCCACCTC...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GGCTCCATCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCTGAGGAATCGGACCTaGAGGCCAGAGCACGTGTGC +
Preference number: 4 (lower is better)
Translates to: GSIAGLAELGHDVRPLGRLRNRT*RPEHVC
Trigger: GCACACGTGCTCTGGCCTCCAGGTCCGATTCCTCAG...ACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTAATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EHLEGLGYLRAPWGGPGVIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...TACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTGGGGAAGCAGGAGGCTaGGGACAGTCCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRGEAGG*GQSPSS
Trigger: GCTGGAGGGGGACTGTCCCCAGCCTCCTGCTTCCCC...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTAGAGCACAGTCCCAGGTATGCAGAGCTGTaGGACAGGGAGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLGYLRAPWGGPGVEHSPRYAEL*DREHLE
Trigger: CTCCAGATGCTCCCTGTCCCACAGCTCTGCATACCT...GGGACTGTGCTCTACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp CCAGCTCCAGGGACTCCAAAAGCCAATGGCTCCCAGCCCAACTCCGGCTCCCCTTTCCTGTCCAGACACTaGTGTCTGCACGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PAPGTPKANGSQPNSGSPFLSRH*CLHERL
Trigger: CAGCCGCTCGTGCAGACACCAGTGTCTGGACAGGAA...AGGGGAGCCGGAGTTGGGCTGGGAGCCATTGGCTTTTGGAGTCCCTGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGGTAGGTCCGTGGCCGGGTaGGGAGGAGGAATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GCSAGSAGQQDHSDHHAGRSVAG*GGGIGG
Trigger: TCCTCCTATTCCTCCTCCCCACCCGGCCACGGACCT...ACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TTCCTTTCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACTGTGCTCCTGTTCTaGCAAAGCTGCGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: FLSIQVLSLSTSAPGSGSTVLLF*QSCAHR
Trigger: GCGGTGGGCGCAGCTTTGCCAGAACAGGAGCACAGT...GGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGAAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CAA 72 bp ACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAGAGCAGGTCACATCGC +
Preference number: 4 (lower is better)
Translates to: TTPRGRGRCSLT*RAWLFESRSHR
Trigger: GCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
3UTR CAA 72 bp TGGCTTAGGTGTCGCACCCACTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGG +
Preference number: 4 (lower is better)
Translates to: WLRCRTHLWGLA*PHGLKASLRNR
Trigger: CCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GGCTCCATCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTGGAAGTCTTTGTAGATaGGCGGGTCCCCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSIAGLAELGHDVRPLGRGSLCR*AGPPWR
Trigger: CCTCCAAGGGGGACCCGCTCATCTACAAAGACTTCC...ACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp CGGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCGGAAGTCTTTGTAGATaGGCGGGTCCCCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RKGSGEGRSSESWYRITVGSLCR*AGPPWR
Trigger: CCTCCAAGGGGGACCCGCTCATCTACAAAGACTTCC...GACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp GGTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GTASQSARPEVVASGGFDTVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...ATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp GTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: VPHHSQLALRWLQAEDSMTVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp TGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCGCTCCTGAGACAGGCTaGCCACCCCTCGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CPDSESEGQEAGKETTVLAPETG*PPLEAG
Trigger: CCCTGCCTCGAGGGGTGGTCAGCCTGTCTCAGGAGC...GAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCGCTCCTGAGACAGGCTaGCCACCCCTCGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIAAPETG*PPLEAG
Trigger: CCCTGCCTCGAGGGGTGGTCAGCCTGTCTCAGGAGC...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGGGCTGCTCAGCTCCTaGGACAGGCTGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLGLLSS*DRLTTP
Trigger: AGGGGTGGTCAGCCTGTCTCAGGAGCTGAGCAGCCC...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCGGGCTGCTCAGCTCCTaGGACAGGCTGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSGLLSS*DRLTTP
Trigger: AGGGGTGGTCAGCCTGTCTCAGGAGCTGAGCAGCCC...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp AAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTGGGCTGCTCAGCTCCTaGGACAGGCTGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: KETTVLPWDKLPPWPSCPGLLSS*DRLTTP
Trigger: AGGGGTGGTCAGCCTGTCTCAGGAGCTGAGCAGCCC...AGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp ACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TTPRGRGRCSLTLRAWLFSLRSE*HRRRCG
Trigger: GCCACAGCGACGCCTATGTCATTCGGATCTGAGGCT...AAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCGCTGCGCCCACCGCCTaGCAATCAGGACGCCTATCG +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPAAPTA*QSGRLS
Trigger: CGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGC...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGGCTGCGCCCACCGCCTaGCAATCAGGACGCCTATCG +
Preference number: 4 (lower is better)
Translates to: PDSESEGQEAGKETTVLPAAPTA*QSGRLS
Trigger: CGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGC...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGGCGGCTGGCTGCACTaGTGGGGGCCACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: DSESEGQEAGKETTVLPWGGWLH*WGPLCS
Trigger: AGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCC...CCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp GATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: DSESEGQEAGKETTVLPWEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...CCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp CGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRPGGWKRNDCPPVGQTARGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...GGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp CTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTCCTTCTGCTCTGGGCTaGTCAGCTCCTGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: LTIRTPIGQNSGPLGPSSPSALG*SAPETG
Trigger: GCCTGTCTCAGGAGCTGAGCAGCCCAGAGCAGAAGG...AGAGGAGGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCAGGCCAGAGCACGTGTaGCGGGGAAGCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GWKRNDCPPVGQTATLAVRPEHV*RGSSKE
Trigger: CTCCTTCGAGCTTCCCCGGCACACGTGCTCTGGCCT...GACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp TCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACCACCACTTGTGCACGTACACACATaGATGCTCGCTAAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SRSCPSAPRPPAQVPPPLVHVHT*MLAKRK
Trigger: CTTCCGCTTAGCGAGCATGCATGTGTGTACGTGCAC...AAGTGGTGGTGGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp TCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACCACCACTTCCGGATTCCCACACATaGAGACATGTACACACGTGC +
Preference number: 4 (lower is better)
Translates to: SRSCPSAPRPPAQVPPPLPDSHT*RHVHTC
Trigger: GCACGTGTGTACATGTCTGCATGTGTGGGAATCCGG...AAGTGGTGGTGGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCGGCTCCCCTCAGCCTaGTCCGTGATGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPRLPSA*SVMLHL
Trigger: CAGGTGGAGCATCACGGAGCAGGCTGAGGGGAGCCG...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCAGACACTGGTGTCTaGACGAGCGGCTGCCCCACC +
Preference number: 4 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPPDTGV*TSGCPT
Trigger: GGTGGGGCAGCCGCTCGTGCAGACACCAGTGTCTGG...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: AQIQSPKARRLEKKRLSSRGLVS*QSRQLP
Trigger: CGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCG...GGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GAGGCCGCTGTGTCTGATGTGAATGAAATGACGGCCATGGTGATGCCCGAGAGGCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: EAAVSDVNEMTAMVMPERRGLVS*QSRQLP
Trigger: CGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCG...CCTCTCGGGCATCACCATGGCCGTCATTTCATTCACATCAGACACAGCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSRGLVS*QSRQLP
Trigger: CGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCG...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCCCACATTGCGGGAGATaGTCCCCTCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPPHCGR*SPRPGS
Trigger: GCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGG...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CCA 90 bp CACTGCTCCCTCTGGTCCTGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCCACATTGCGGGAGATaGTCCCCTCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HCSLWSWECPEVHRGLTSPHCGR*SPRPGS
Trigger: GCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGG...GGAAGTGAGACCACGATGTACTTCTGGACACTCCCAGGACCAGAGGGAGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp ACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCACATTGCGGGAGATaGTCCCCTCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TAVLPASDTTERLGPLPPPHCGR*SPRPGS
Trigger: GCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGG...AGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CCA 90 bp AGTTTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGAACAGGACGGGGCGGCTaGCTGCACTGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLFPSPYRAGWTRRRPGRTGRGG*LHCWGP
Trigger: TGGCCCCCAGCAGTGCAGCCAGCCGCCCCGTCCTGT...TCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp TGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAATCTGGTCAGAGCGACTaGACAGGACGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WECPEVHRGLTSPNRGGQSGQSD*TGRGGW
Trigger: CCAGCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGA...TTGCCCTCCCCTGTTGGGGGAAGTGAGACCACGATGTACTTCTGGACACTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTTCTGGTCAGAGCGACTaGACAGGACGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRSGQSD*TGRGGW
Trigger: CCAGCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGA...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCTCTGGTCAGAGCGACTaGACAGGACGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQIQSPKARRLEKKRLSSSGQSD*TGRGGW
Trigger: CCAGCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGA...GGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGCAGCTCGCCCTGAGGTaGTTGCAAGCGGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: WVDEKTPWTTRYGSIAGLQLALR*LQAEDS
Trigger: CGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTG...CAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp CCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCAGGTCCTGGGGGCCCTaGGACGTCCATCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PLTELGGREDALDDSLWLRSWGP*DVHLEK
Trigger: CTTTTCCAGATGGACGTCCCAGGGCCCCCAGGACCT...GAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTATGGCTGGGAGGTCCTaGGGGCCCTGGGACGTCCAT +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLMAGRS*GPWDVH
Trigger: ATGGACGTCCCAGGGCCCCCAGGACCTCCCAGCCAT...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCATGGCTGGGAGGTCCTaGGGGCCCTGGGACGTCCAT +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSMAGRS*GPWDVH
Trigger: ATGGACGTCCCAGGGCCCCCAGGACCTCCCAGCCAT...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCACTGAGGAATCGGACCTaGAGGCCAGAGCACGTGTGC +
Preference number: 4 (lower is better)
Translates to: GRGAVRGGHRRVGTASQSLRNRT*RPEHVC
Trigger: GCACACGTGCTCTGGCCTCCAGGTCCGATTCCTCAG...TGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TCCAGCTCCAGGGACTCCAAAAGCCAATGGCTCCCAGCCCAACTCCGGCTCCCCCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAAT +
Preference number: 4 (lower is better)
Translates to: SSSRDSKSQWLPAQLRLPRRVLV*GASDPN
Trigger: ATTCGGATCTGAGGCTCCCCAAACGAGGACACGACG...GGGGAGCCGGAGTTGGGCTGGGAGCCATTGGCTTTTGGAGTCCCTGGAGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAAT +
Preference number: 4 (lower is better)
Translates to: VLPWDKLPPWPSCPRLGSRRVLV*GASDPN
Trigger: ATTCGGATCTGAGGCTCCCCAAACGAGGACACGACG...GCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGAGGTATGCAGAGCTGTaGGACAGGGAGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: ALPHGLKASLRNRTWRPERYAEL*DREHLE
Trigger: CTCCAGATGCTCCCTGTCCCACAGCTCTGCATACCT...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp GTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTTGGCCCTCGCACCCCTaGCTTGCTGAAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VLPASDTTERLGPLPPPGWPSHP*LAEGSW
Trigger: CCAGGAACCTTCAGCAAGCCAGGGGTGCGAGGGCCA...ACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTAGGTCCGTGGCCGGGTaGGGAGGAGGAATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RRTPVWDRHLHTATCALSRSVAG*GGGIGG
Trigger: TCCTCCTATTCCTCCTCCCCACCCGGCCACGGACCT...ACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCCATCACGCAGGTCCGTaGCCGGGTGGGGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPHHAGP*PGGEEE
Trigger: TTCCTCCTCCCCACCCGGCCACGGACCTGCGTGATG...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TGGCAAAGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGACTGTGCTCCTGTTCTaGCAAAGCTGCGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: WQSCAHRLTIRTPIGQNSTVLLF*QSCAHR
Trigger: GCGGTGGGCGCAGCTTTGCCAGAACAGGAGCACAGT...CGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp CCATCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGCAGGCTTGGCTGAGCTaGGACACGATGTTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSQAWLSWDTMLGLLAVVQAWLS*DTMLGL
Trigger: GAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTG...CACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp TCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCGACGAGAAGACGCCCTaGACGACTCGTTATGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQAWLSWDTMLGLLAVVSDEKTP*TTRYGS
Trigger: GGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTC...GGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp CCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGCACAAGCGGAGGATTCGATaGGACTCAAATTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PSPACSPSSSWSPPPPPHKRRIR*DSNSSR
Trigger: TCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTT...GTGCGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp GCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ARRLEKKRLSSRGTNCHLTVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...AAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp CGGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 4 (lower is better)
Translates to: RKGSGEGRSSESWYRITVEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...GACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp GCTCTGACTTCCCCACACAAAACTCTTCCGTCAAGCCAATGCGCATCTCAGAGCGCTCCTGAGACAGGCTaGCCACCCCTCGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALTSPHKTLPSSQCASQSAPETG*PPLEAG
Trigger: CCCTGCCTCGAGGGGTGGTCAGCCTGTCTCAGGAGC...GCTCTGAGATGCGCATTGGCTTGACGGAAGAGTTTTGTGTGGGGAAGTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR TCA 90 bp AACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTCGCCACTGGTTACCATaGCAACCGGGGACTCGTCTC +
Preference number: 4 (lower is better)
Translates to: NDCPPVGQTATLAVVSSFRHWLP*QPGTRL
Trigger: GAGACGAGTCCCCGGTTGTCATGGTAACCAGTGGCG...AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429084.5
CDS-3UTR GCA 90 bp GCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: ALQAQQVNRTTLTITQVRIPEPH*GRWSPR
Trigger: GCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTAT...ACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp CAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGCGGCTGGCTGCACTaGTGGGGGCCACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QIQSPKARRLEKKRLSSRGGWLH*WGPLCS
Trigger: AGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCC...ACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPRGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp GTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCCTTCTGCTCTGGGCTaGTCAGCTCCTGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: VLPASDTTERLGPLPPPGPSALG*SAPETG
Trigger: GCCTGTCTCAGGAGCTGAGCAGCCCAGAGCAGAAGG...ACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGGCGAAGGGCTCCCTCTaGCAGCTCAGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLAKGSL*QLSLLL
Trigger: GAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGC...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCGCGAAGGGCTCCCTCTaGCAGCTCAGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSAKGSL*QLSLLL
Trigger: GAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGC...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAAAGGCCAGAGCACGTGTaGCGGGGAAGCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: WECPEVHRGLTSPNRGGQRPEHV*RGSSKE
Trigger: CTCCTTCGAGCTTCCCCGGCACACGTGCTCTGGCCT...TTGCCCTCCCCTGTTGGGGGAAGTGAGACCACGATGTACTTCTGGACACTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCAGGCCAGAGCACGTGTaGCGGGGAAGCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPRPEHV*RGSSKE
Trigger: CTCCTTCGAGCTTCCCCGGCACACGTGCTCTGGCCT...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCAGGCCAGAGCACGTGTaGCGGGGAAGCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSRPEHV*RGSSKE
Trigger: CTCCTTCGAGCTTCCCCGGCACACGTGCTCTGGCCT...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp AACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTC +
Preference number: 4 (lower is better)
Translates to: NDCPPVGQTATLAVVSSFSRGTN*HLGRRV
Trigger: GACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGA...AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTCCACCGTCCCCAGCGTaGAGCCCATCGTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLPPSPA*SPSSSW
Trigger: CCAACTTGACGATGGGCTGCACGCTGGGGACGGTGG...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp CACTGCTCCCTCTGGTCCTGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCCACCGTCCCCAGCGTaGAGCCCATCGTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: HCSLWSWECPEVHRGLTSPPSPA*SPSSSW
Trigger: CCAACTTGACGATGGGCTGCACGCTGGGGACGGTGG...GGAAGTGAGACCACGATGTACTTCTGGACACTCCCAGGACCAGAGGGAGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: CPDSESEGQEAGKETTVLRGLVS*QSRQLP
Trigger: CGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCG...GAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp ACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCGAAGGGTGGCCAACCTaGAGAGCAGTTCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TELGGREDALDDSLWLHREGWPT*RAVLGG
Trigger: GCCTCCTAGAACTGCTCTCCAGGTTGGCCACCCTTC...GCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCACATTGCGGGAGATaGTCCCCTCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCPHCGR*SPRPGS
Trigger: GCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGG...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CCA 90 bp GGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCCAGCTCGCCCTGAGGTaGTTGCAAGCGGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: GWKRNDCPPVGQTATLAVQLALR*LQAEDS
Trigger: CGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTG...GACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCATGGCTGGGAGGTCCTaGGGGCCCTGGGACGTCCAT +
Preference number: 4 (lower is better)
Translates to: CPDSESEGQEAGKETTVLMAGRS*GPWDVH
Trigger: ATGGACGTCCCAGGGCCCCCAGGACCTCCCAGCCAT...GAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCATGGCTGGGAGGTCCTaGGGGCCCTGGGACGTCCAT +
Preference number: 4 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCMAGRS*GPWDVH
Trigger: ATGGACGTCCCAGGGCCCCCAGGACCTCCCAGCCAT...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AGTTTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGAGAGGTGGAGAGCCCATaGCTGGGAGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLFPSPYRAGWTRRRPGREVESP*LGGPGG
Trigger: GCCCCCAGGACCTCCCAGCCATGGGCTCTCCACCTC...TCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp AGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGAGGTGGAGAGCCCATaGCTGGGAGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SQLALRWLQAEDSMRLKFEVESP*LGGPGG
Trigger: GCCCCCAGGACCTCCCAGCCATGGGCTCTCCACCTC...GAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AAGCAGAGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTGAGGAATCGGACCTaGAGGCCAGAGCACGTGTGC +
Preference number: 4 (lower is better)
Translates to: KQRRTPVWDRHLHTATCALRNRT*RPEHVC
Trigger: GCACACGTGCTCTGGCCTCCAGGTCCGATTCCTCAG...GGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPLQSWVDEKTPWTTRYGVGIAA*PEGQPE
Trigger: CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC...GCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTTGTCGCACCCACTTGTaGGGGTTGGCATTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: VDEKTPWTTRYGSIAGLACRTHL*GLALPH
Trigger: ATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACA...AGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp TTCCTTTCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: FLSIQVLSLSTSAPGSGSDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...GGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGAAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp CACTTGTGGGGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: HLWGLALPHGLKASLRNRDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...CCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: GRGAVRGGHRRVGTASQSTTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...TGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTGAGCACAGTCCCCTCTaGGCCCCAAGTCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RRTPVWDRHLHTATCALSEHSPL*APSQEL
Trigger: CAGCTCTTGACTTGGGGCCCAGAGGGGACTGTGCTC...ACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGGGACAGGGAGCATCTaGAGGGCCTGGGTTACCTCA +
Preference number: 4 (lower is better)
Translates to: GLGTEDSSCPDSESEGQEGTGSI*RAWVTS
Trigger: TGAGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCC...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTCTTCCTGTCCAGACACTaGTGTCTGCACGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GEPLCGTGTCTQPHVPSVFLSRH*CLHERL
Trigger: CAGCCGCTCGTGCAGACACCAGTGTCTGGACAGGAA...GACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTTGGCCCTCGCACCCCTaGCTTGCTGAAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KETTVLPWDKLPPWPSCPWPSHP*LAEGSW
Trigger: CCAGGAACCTTCAGCAAGCCAGGGGTGCGAGGGCCA...AGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGAGAACGCGTGTGCGCTaGCCCTTTAAGAGCGATTCT +
Preference number: 4 (lower is better)
Translates to: ALPHGLKASLRNRTWRPERTRVR*PFKSDS
Trigger: AGAATCGCTCTTAAAGGGCCAGCGCACACGCGTTCT...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CCA 90 bp GCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCTCGTTTGCTCCATCGCAGGCTTaGCTGAGCTGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: AWLSWDTMLGLLAVVSSFAPSQA*LSWDTM
Trigger: CATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGC...AAACGAGGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp AGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGCTGGACGACTCGTTATaGCTCCATCGCAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RAGWTRRRPGRLVMAPSQLDDSL*LHRRLG
Trigger: GCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAG...CTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp TGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGCCTTACAGAGCTGGGTaGACGAGAAGACGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: WVDEKTPWTTRYGSIAGLPYRAG*TRRRPG
Trigger: TCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGG...CAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp CCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCTTCCCCTTACAGAGCTaGGTGGACGAGAAGACGCCC +
Preference number: 4 (lower is better)
Translates to: PLTELGGREDALDDSLWLFPLQS*VDEKTP
Trigger: GGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAA...GAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421755.5
3UTR CAA 72 bp AGCACTTCATCCAGGAGTTCGTATACCAGAGCCACATaGCGGGAGATGGTCCCCTCGCCCAGGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: STSSRSSYTRAT*REMVPSPREPQ
Trigger: CTGTGGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGATGAAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR CAA 72 bp AGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATC +
Preference number: 4 (lower is better)
Translates to: RNDCPPVGQTAT*AVVSSFGEPQI
Trigger: GATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIATVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp CATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGCCGGAAGGGGAGCGGTaGGGGGAGGTCATCGGAGAG +
Preference number: 4 (lower is better)
Translates to: HSCLQGELQEQLVQAGSEPEGER*GEVIGE
Trigger: CTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGG...CTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 4 (lower is better)
Translates to: LTIRTPIGQNSGPLGPSSEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...AGAGGAGGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp ACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: TRRRPGRLVMAPSQAWLSKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...GCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp GCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCTCGTTTAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AWLSWDTMLGLLAVVSSFSLRSE*HRRRCG
Trigger: GCCACAGCGACGCCTATGTCATTCGGATCTGAGGCT...AAACGAGGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSSWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp ATCCAGGAGTTCGTATACCAGAGCCACATTGCGGGAGATGGTCCCCTCGCCCAGATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: IQEFVYQSHIAGDGPLAQIPEPH*GRWSPR
Trigger: GCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTAT...CTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR GCA 90 bp CGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RRPGGWKRNDCPPVGQTAIPEPH*GRWSPR
Trigger: GCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTAT...GGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR GCA 90 bp TCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SPYRAGWTRRRPGRLVMAIPEPH*GRWSPR
Trigger: GCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTAT...AGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp TTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTGCTGGGGGCCACTTTaGTCTGTTGTGTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: FPLQSWVDEKTPWTTRYGCWGPL*SVVSQP
Trigger: GGGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCA...GCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp CGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCAGATGGCGGCTGGCTGCACTaGTGGGGGCCACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RPEVVASGGFDETQIRPDGGWLH*WGPLCS
Trigger: AGAGCAAAGTGGCCCCCAGCAGTGCAGCCAGCCGCC...ATCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR GCA 90 bp TTTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTGAGCCTCGGTCCCACTaGACAGAGGGGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: FISFPLQSWVDEKTPWTTEPRSH*TEGKSR
Trigger: CCGGCTCTTCCCCTCTGTGCAGTGGGACCGAGGCTC...AGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCRGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIARGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGCCTTCTGCTCTGGGCTaGTCAGCTCCTGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: PDSESEGQEAGKETTVLPPSALG*SAPETG
Trigger: GCCTGTCTCAGGAGCTGAGCAGCCCAGAGCAGAAGG...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCTTCTGCTCTGGGCTaGTCAGCTCCTGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLPSALG*SAPETG
Trigger: GCCTGTCTCAGGAGCTGAGCAGCCCAGAGCAGAAGG...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp GATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGCCTTCTGCTCTGGGCTaGTCAGCTCCTGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: DSESEGQEAGKETTVLPWPSALG*SAPETG
Trigger: GCCTGTCTCAGGAGCTGAGCAGCCCAGAGCAGAAGG...CCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTC +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPSRGTN*HLGRRV
Trigger: GACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGA...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp GGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGCCGGATTCCCACACATaGAGACATGTACACACGTGC +
Preference number: 4 (lower is better)
Translates to: GSGEGRSSESWYRITVSSPDSHT*RHVHTC
Trigger: GCACGTGTGTACATGTCTGCATGTGTGGGAATCCGG...CGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR GCA 90 bp GCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTACAGGGCAAGCGGCCTaGCTTTCCTTTCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: ALQAQQVNRTTLTITQVRTGQAA*LSFLSR
Trigger: CCTGGATAGAAAGGAAAGGCAGGCCGCTTGCCCTGT...ACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp CAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGCGCCCACCAGGGTCCTaGAGGGCTGTAGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QVYCNVIVLQRPIHPAGMRPPGS*RAVAAL
Trigger: CAGGGCAGCTACAGCCCTGCAGGACCCTGGTGGGCG...CATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTACAATAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AGTTTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SLFPSPYRAGWTRRRPGRRGLVS*QSRQLP
Trigger: CGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCG...TCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGAAGGGTGGCCAACCTaGAGAGCAGTTCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLGTEDSSCPDSESEGQEEGWPT*RAVLGG
Trigger: GCCTCCTAGAACTGCTCTCCAGGTTGGCCACCCTTC...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CCA 90 bp CGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCGAAGGGTGGCCAACCTaGAGAGCAGTTCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRPGGWKRNDCPPVGQTAEGWPT*RAVLGG
Trigger: GCCTCCTAGAACTGCTCTCCAGGTTGGCCACCCTTC...GGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTCTGGTCAGAGCGACTaGACAGGACGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHSGQSD*TGRGGW
Trigger: CCAGCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGA...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCTCTGGTCAGAGCGACTaGACAGGACGGGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQLALRWLQAEDSMRLKFSGQSD*TGRGGW
Trigger: CCAGCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGA...GAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp GCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AGWTRRRPGRLVMAPSQARSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...AGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GSGEGRSSESWYRITVSSRSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...CGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCAGGTCCTGGGGGCCCTaGGACGTCCATCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPRSWGP*DVHLEK
Trigger: CTTTTCCAGATGGACGTCCCAGGGCCCCCAGGACCT...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCAGGTCCTGGGGGCCCTaGGACGTCCATCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGRSWGP*DVHLEK
Trigger: CTTTTCCAGATGGACGTCCCAGGGCCCCCAGGACCT...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGGAGGTGGAGAGCCCATaGCTGGGAGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QVYCNVIVLQRPIHPAGMEVESP*LGGPGG
Trigger: GCCCCCAGGACCTCCCAGCCATGGGCTCTCCACCTC...CATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTACAATAAACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp CATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGGAGGTGGAGAGCCCATaGCTGGGAGGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HSCLQGELQEQLVQAGSEEVESP*LGGPGG
Trigger: GCCCCCAGGACCTCCCAGCCATGGGCTCTCCACCTC...CTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGCTGAGGAATCGGACCTaGAGGCCAGAGCACGTGTGC +
Preference number: 4 (lower is better)
Translates to: PDSESEGQEAGKETTVLPLRNRT*RPEHVC
Trigger: GCACACGTGCTCTGGCCTCCAGGTCCGATTCCTCAG...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCCTGAGGAATCGGACCTaGAGGCCAGAGCACGTGTGC +
Preference number: 4 (lower is better)
Translates to: HHSQLALRWLQAEDSMRLLRNRT*RPEHVC
Trigger: GCACACGTGCTCTGGCCTCCAGGTCCGATTCCTCAG...GAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CACTGCTCCCTCTGGTCCTGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HCSLWSWECPEVHRGLTSVGIAA*PEGQPE
Trigger: CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC...GGAAGTGAGACCACGATGTACTTCTGGACACTCCCAGGACCAGAGGGAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGAGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FRVRRPGGWKRNDCPPVGVGIAA*PEGQPE
Trigger: CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC...TCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLVGIAA*PEGQPE
Trigger: CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRVGIAA*PEGQPE
Trigger: CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGTCGCACCCACTTGTaGGGGTTGGCATTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSCRTHL*GLALPH
Trigger: ATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACA...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp AGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAAT +
Preference number: 4 (lower is better)
Translates to: RGAVRGGHRRVGTASQSARRVLV*GASDPN
Trigger: ATTCGGATCTGAGGCTCCCCAAACGAGGACACGACG...AGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: GLGTEDSSCPDSESEGQETTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GWKRNDCPPVGQTATLAVIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...GACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGAGCCCATCGTCAAGTTaGTCTCCACCGCCACCACCG +
Preference number: 4 (lower is better)
Translates to: DSESEGQEAGKETTVLPWSPSSS*SPPPPP
Trigger: CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCT...CCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCGAGCACAGTCCCCTCTaGGCCCCAAGTCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AQIQSPKARRLEKKRLSSEHSPL*APSQEL
Trigger: CAGCTCTTGACTTGGGGCCCAGAGGGGACTGTGCTC...GGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAGCATCTGGAGGGCCTaGGTTACCTCAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: SESEGQEAGKETTVLPWDSIWRA*VTSEHP
Trigger: AGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCT...GTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTGGGACAGGGAGCATCTaGAGGGCCTGGGTTACCTCA +
Preference number: 4 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRGTGSI*RAWVTS
Trigger: TGAGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCC...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp GCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGCCCTCGTTTTCTGAAGTTGTaGCCACCAAATAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: AVRGGHRRVGTASQSARPRFLKL*PPNRGR
Trigger: GCGGCCTCTATTTGGTGGTCACAACTTCAGAAAACG...AGGGCGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp TCCAGCTCCAGGGACTCCAAAAGCCAATGGCTCCCAGCCCAACTCCGGCTCCCCAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 4 (lower is better)
Translates to: SSSRDSKSQWLPAQLRLPRFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...GGGGAGCCGGAGTTGGGCTGGGAGCCATTGGCTTTTGGAGTCCCTGGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp AGGCGTCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGGGGTTGGCATTGCCGCAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 4 (lower is better)
Translates to: RRRCGLGVAPTCGGWHCRRFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...GCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCACAGCGACGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTAAAGCGGAGGATTCGATaGGACTCAAATTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: EHLEGLGYLRAPWGGPGVKRRIR*DSNSSR
Trigger: TCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTT...TACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATACAGTCAGCTCGCCCTaGGGTGGTTGCAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHTVSSP*GGCKRR
Trigger: CCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGT...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 4 (lower is better)
Translates to: GWKRNDCPPVGQTATLAVEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...GACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp TTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 4 (lower is better)
Translates to: FPLQSWVDEKTPWTTRYGEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...GCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp CGTCCATCTGGAAAAGGCCTGAGAGTTGAGAGCCTCCTTGCACCCGAGGCAGGTGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 4 (lower is better)
Translates to: RPSGKGLRVESLLAPEAGEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...ACCTGCCTCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp GGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCACATCTGGAAAAGGCCTaGGAGTTGAGAGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GRGAVRGGHRRVGTASQSHLEKA*ELRASL
Trigger: CAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATG...TGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLSLRSE*HRRRCG
Trigger: GCCACAGCGACGCCTATGTCATTCGGATCTGAGGCT...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp CATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HHSQLALRWLQAEDSMRLSWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...GAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCAGATTCACAGAGCCAGGCAGGGAGCGAGTaGAGCGTCCTCGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VVASGGFDETQIRPDSQSQAGSE*SVLARP
Trigger: AGGCCTGGCGAGGACGCTTCACTCGCTCCCTGCCTG...GCTCTGTGAATCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR TCA 90 bp GCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCAAGCGGGAGTGCACTaGTGCAACCTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AQIQSPKARRLEKKRLSSQAGVH*CNLCSL
Trigger: CAGTGAGCAGAGGTTGCATCAGTGCACTCCCGCTTG...GGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPIPEPH*GRWSPR
Trigger: GCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTAT...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR GCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGTGCTGGGGGCCACTTTaGTCTGTTGTGTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLCWGPL*SVVSQP
Trigger: GGGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCA...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp CATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCTGCTGGGGGCCACTTTaGTCTGTTGTGTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HHSQLALRWLQAEDSMRLCWGPL*SVVSQP
Trigger: GGGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCA...GAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR GCA 90 bp GGTCACATCGCAACTTTAGATAAACCTGGAGCCGGCCTGAGCCTCGGTCCCACTTGCTGGGGGCCACTTTaGTCTGTTGTGTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHIATLDKPGAGLSLGPTCWGPL*SVVSQP
Trigger: GGGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCA...AGTGGGACCGAGGCTCAGGCCGGCTCCAGGTTTATCTAAAGTTGCGATGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR GCA 90 bp AACCTCTGCTCACTGCAGCCTCCACCACCTGGGTTCAAGCATTCTAGTACCTCAGCGAAGGGCTCCCTCTaGCAGCTCAGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NLCSLQPPPPGFKHSSTSAKGSL*QLSLLL
Trigger: GAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGC...TGAGGTACTAGAATGCTTGAACCCAGGTGGTGGAGGCTGCAGTGAGCAGAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATGCGAAGGGCTCCCTCTaGCAGCTCAGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHAKGSL*QLSLLL
Trigger: GAGCAGAAGGCTGAGCTGGCAGAGGGAGCCCTTCGC...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATAGGCCAGAGCACGTGTaGCGGGGAAGCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHRPEHV*RGSSKE
Trigger: CTCCTTCGAGCTTCCCCGGCACACGTGCTCTGGCCT...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp CAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTTCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTC +
Preference number: 4 (lower is better)
Translates to: QIQSPKARRLEKKRLSSRSRGTN*HLGRRV
Trigger: GACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGA...ACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp AGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTGCACACAGCCACATGTaGCCTCAGTCAGTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RGAVRGGHRRVGTASQSAAHSHM*PQSVVS
Trigger: TGAGACTACTGACTGAGGGCACATGTGGCTGTGTGC...AGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCGAAGGGTGGCCAACCTaGAGAGCAGTTCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPEGWPT*RAVLGG
Trigger: GCCTCCTAGAACTGCTCTCCAGGTTGGCCACCCTTC...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CCA 90 bp GTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCGCATCTCCGTGGATGTaGTCTGTACATAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: VLPWDKLPPWPSCPRLGSASPWM*SVHSHS
Trigger: ACTATGGCTATGTACAGACCACATCCACGGAGATGC...GCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GAGTTCGTATACCAGAGCCACATTGCGGGAGATGGTCCCCTCGCCCAGGGAGCCTCCTCAGCATCTCCGTaGATGTGGTCTGTACATAGC +
Preference number: 4 (lower is better)
Translates to: EFVYQSHIAGDGPLAQGASSASP*MWSVHS
Trigger: GCTATGTACAGACCACATCCACGGAGATGCTGAGGA...GGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp GCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTCCTCAGCATCTCCGTaGATGTGGTCTGTACATAGC +
Preference number: 4 (lower is better)
Translates to: AGWTRRRPGRLVMAPSQASSASP*MWSVHS
Trigger: GCTATGTACAGACCACATCCACGGAGATGCTGAGGA...AGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTCATTCTTTTGGCTCTaGTCAGAGCGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: AGWTRRRPGRLVMAPSQASFFWL*SERLDR
Trigger: CCTGTCCAGTCGCTCTGACCAGAGCCAAAAGAATGA...AGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp AAACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCCAGCTCGCCCTGAGGTaGTTGCAAGCGGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: KQANAAEVKEAEGLADHSQLALR*LQAEDS
Trigger: CGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTG...GCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CCA 90 bp CAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QIQSPKARRLEKKRLSSRVGIAA*PEGQPE
Trigger: CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC...ACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCVGIAA*PEGQPE
Trigger: CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAAC...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTTGTCGCACCCACTTGTaGGGGTTGGCATTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLCRTHL*GLALPH
Trigger: ATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACA...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCTGTCGCACCCACTTGTaGGGGTTGGCATTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPCRTHL*GLALPH
Trigger: ATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACA...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCTCGTTTCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAAT +
Preference number: 4 (lower is better)
Translates to: AWLSWDTMLGLLAVVSSFRRVLV*GASDPN
Trigger: ATTCGGATCTGAGGCTCCCCAAACGAGGACACGACG...AAACGAGGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: DSESEGQEAGKETTVLPWTTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...CCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PDSESEGQEAGKETTVLPTTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp ACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TAVLPASDTTERLGPLPPIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...AGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp TTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGAATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FRVRRPGGWKRNDCPPVGIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...TCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGCAGAGCTGTGAGGAGAACCCCTGTGTaGGACAGGCACTTGCACACA +
Preference number: 4 (lower is better)
Translates to: VMSSSSSAPSTQQVCRAVRRTPV*DRHLHT
Trigger: TGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT...CACAGCTCTGCATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GGACGTCCATCTGGAAAAGGCCTGAGAGTTGAGAGCCTCCTTGCACCCGAGGCACAGCCTCCCAAGTGCTaGGATACAGGCCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: GRPSGKGLRVESLLAPEAQPPKC*DTGLRC
Trigger: GCATCTTAGGCCTGTATCCCAGCACTTGGGAGGCTG...TGCCTCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATGGACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR TCA 90 bp ACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCCGTTTTCTGAAGTTGTaGCCACCAAATAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: TELGGREDALDDSLWLHRRFLKL*PPNRGR
Trigger: GCGGCCTCTATTTGGTGGTCACAACTTCAGAAAACG...GCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp AGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RGAVRGGHRRVGTASQSAAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...AGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp GCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: ARRLEKKRLSSRGTNCHLKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...AAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp GCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: AQIQSPKARRLEKKRLSSKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...GGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp ACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATGACACATCTGGAAAAGGCCTaGGAGTTGAGAGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TATLAVVSSFGEPQIRMTHLEKA*ELRASL
Trigger: CAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATG...TGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp CTTCCCCACACAAAACTCTTCCGTCAAGCCAATGCGCATCTCAGAGCCGCTAGGAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPHTKLFRQANAHLRAARSLRSE*HRRRCG
Trigger: GCCACAGCGACGCCTATGTCATTCGGATCTGAGGCT...CCTAGCGGCTCTGAGATGCGCATTGGCTTGACGGAAGAGTTTTGTGTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR TCA 90 bp AGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCGCCCATCTTTTCTTATaGGAAAGCCCACAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SCAHRLTIRTPIGQNSGPAHLFL*ESPQCS
Trigger: AGAACACTGTGGGCTTTCTCATAAGAAAAGATGGGC...GGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp AACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTTTTTGGCCAGGCTCTTaGCCTCAAGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: NDCPPVGQTATLAVVSSFFWPGS*PQVIHP
Trigger: TGGGTGGATCACTTGAGGTCAAGAGCCTGGCCAAAA...AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCTTTTGGCCAGGCTCTTaGCCTCAAGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: RRPGGWKRNDCPPVGQTAFWPGS*PQVIHP
Trigger: TGGGTGGATCACTTGAGGTCAAGAGCCTGGCCAAAA...GGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp TTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGAGACCTGGAAAAGGCCTaGGAGTTGAGAGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FRVRRPGGWKRNDCPPVGDLEKA*ELRASL
Trigger: CAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGGTC...TCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445295.1
CDS-3UTR GCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCTGCTGGGGGCCACTTTaGTCTGTTGTGTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIACWGPL*SVVSQP
Trigger: GGGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCA...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp CGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCAGATAAAGGCTGGGCCCATTaGCCCCTCCTGGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RPEVVASGGFDETQIRPDKGWAH*PLLVLG
Trigger: TCCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTT...ATCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR GCA 90 bp AACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGCACACAGCCACATGTaGCCTCAGTCAGTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: NDCPPVGQTATLAVVSSFAHSHM*PQSVVS
Trigger: TGAGACTACTGACTGAGGGCACATGTGGCTGTGTGC...AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp ACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATGACACTGCACCTGGCCCCGTaGCCATCTTTTCTTATGAGA +
Preference number: 4 (lower is better)
Translates to: TATLAVVSSFGEPQIRMTLHLAP*PSFLMR
Trigger: TCTCATAAGAAAAGATGGGCACGGGGCCAGGTGCAG...TGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR GCA 90 bp TTCCTTTCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCAGGTGCGTGCCACCATaGCTGGCTAGTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: FLSIQVLSLSTSAPGSGSRCVPP*LASFCI
Trigger: AATACAAAAACTAGCCAGGCATGGTGGCACGCACCT...GGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGAAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp CAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCTCGGCATCTCCGTGGATGTaGTCTGTACATAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: QAWLSWDTMLGLLAVVSSASPWM*SVHSHS
Trigger: ACTATGGCTATGTACAGACCACATCCACGGAGATGC...CGAGGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp ACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGGCATCTCCGTGGATGTaGTCTGTACATAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: TVLPWDKLPPWPSCPRLGASPWM*SVHSHS
Trigger: ACTATGGCTATGTACAGACCACATCCACGGAGATGC...CCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp ACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTGAGGCATCTCCGTGGATGTaGTCTGTACATAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: TPRGRGRCSLTLRAWLFEASPWM*SVHSHS
Trigger: ACTATGGCTATGTACAGACCACATCCACGGAGATGC...CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp TCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SQAWLSWDTMLGLLAVVSTTASV*MKFLSI
Trigger: GATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGT...GGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp ACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TVLPWDKLPPWPSCPRLGTTASV*MKFLSI
Trigger: GATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGT...CCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp ACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTGAGACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TPRGRGRCSLTLRAWLFETTASV*MKFLSI
Trigger: GATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGT...CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp GGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GSGEGRSSESWYRITVSSTTASV*MKFLSI
Trigger: GATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGT...CGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp GGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCATCATTCTTTTGGCTCTaGTCAGAGCGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GRGAVRGGHRRVGTASQSSFFWL*SERLDR
Trigger: CCTGTCCAGTCGCTCTGACCAGAGCCAAAAGAATGA...TGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp TCTATCCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACCACCAAAACTTCATTCTTTTaGCTCTGGTCAGAGCGACTG +
Preference number: 4 (lower is better)
Translates to: SIQVLSLSTSAPGSGSTTKTSFF*LWSERL
Trigger: CAGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTT...GGTGGTGGAACCTGAGCCGGGGGCCGAGGTGCTGAGGGACAGGACCTGGATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATCAGCTCGCCCTGAGGTaGTTGCAAGCGGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHQLALR*LQAEDS
Trigger: CGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTG...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RRPGGWKRNDCPPVGQTARSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...GGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLGTEDSSCPDSESEGQERSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTCTGACATTGAGGGCTTaGCTCTTTGAGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VDEKTPWTTRYGSIAGLALTLRA*LFESRS
Trigger: TGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAG...AGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp CTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTTGTCGCACCCACTTGTaGGGGTTGGCATTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: LPRFRVRRPGGWKRNDCPCRTHL*GLALPH
Trigger: ATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACA...AGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAAT +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLRRVLV*GASDPN
Trigger: ATTCGGATCTGAGGCTCCCCAAACGAGGACACGACG...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAAT +
Preference number: 4 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLRRVLV*GASDPN
Trigger: ATTCGGATCTGAGGCTCCCCAAACGAGGACACGACG...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp CTCAGAGCCGCTAGGAAGGAAGCTCTTGAGCCGAATCTCTCCCTGCACATCCACCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAAT +
Preference number: 4 (lower is better)
Translates to: LRAARKEALEPNLSLHIHRRVLV*GASDPN
Trigger: ATTCGGATCTGAGGCTCCCCAAACGAGGACACGACG...GTGGATGTGCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CCA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIATTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp AAACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KQANAAEVKEAEGLADHSIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...GCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CCA 90 bp AGGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTCTTGCTGAAGGTTCCTaGCTCCATCGCACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RRTPVWDRHLHTATCALSLAEGS*LHRTSC
Trigger: ACAGGAAGTGCGATGGAGCCAGGAACCTTCAGCAAG...ACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGCTTGCTGAAGGTTCCTaGCTCCATCGCACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VPHHSQLALRWLQAEDSMLAEGS*LHRTSC
Trigger: ACAGGAAGTGCGATGGAGCCAGGAACCTTCAGCAAG...CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp GCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTCCTCTTCTTAGTAGATaGTGCCACTTCCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: ALQAQQVNRTTLTITQVRPLLSR*CHFPLS
Trigger: GGAAAGGGGGAAGTGGCACCATCTACTAAGAAGAGG...ACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
3UTR CAA 72 bp CCAATGCGCATCTCAGAGCCGCTAGGAAGGAAGCTCTaGAGCCGAATCTCTCCCTGCACATCCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PMRISEPLGRKL*SRISPCTSTFS
Trigger: GCTGAAGGTGGATGTGCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGAGATGCGCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR TCA 90 bp CCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGAGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PHHSQLALRWLQAEDSMRAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...TCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp AGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGAAGCGGAGGATTCGATaGGACTCAAATTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RAGWTRRRPGRLVMAPSQKRRIR*DSNSSR
Trigger: TCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTT...CTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp AGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTAAGCGGAGGATTCGATaGGACTCAAATTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RGAVRGGHRRVGTASQSAKRRIR*DSNSSR
Trigger: TCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTT...AGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACATCTGGAAAAGGCCTaGGAGTTGAGAGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPHLEKA*ELRASL
Trigger: CAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATG...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp AAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCATCTGGAAAAGGCCTaGGAGTTGAGAGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KETTVLPWDKLPPWPSCPHLEKA*ELRASL
Trigger: CAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATG...AGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp AGAGCCGGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCATTGGTTTGTAAGTTCTaGTCCACTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RAGRGAVRGGHRRVGTASLVCKF*STAVLP
Trigger: AGGAAGGACTGCAGTGGATCAGAACTTACAAACCAA...TGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR TCA 90 bp ACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGTTGGTTTGTAAGTTCTaGTCCACTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TVLPWDKLPPWPSCPRLGLVCKF*STAVLP
Trigger: AGGAAGGACTGCAGTGGATCAGAACTTACAAACCAA...CCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATCTGATTTCGAACTCCTaGCCTCAGGTGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHLISNS*PQVIRP
Trigger: CGGGCGGATCACCTGAGGTCAGGAGTTCGAAATCAG...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422582.5
CDS-3UTR GCA 90 bp CGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCAGATTGCTGGGGGCCACTTTaGTCTGTTGTGTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPEVVASGGFDETQIRPDCWGPL*SVVSQP
Trigger: GGGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCA...ATCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR GCA 90 bp GTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCACGAGGCAGGGGGAGGTaGAGCCTGACATTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSSHSCLQGELQEQLVQARGRGR*SLTLRA
Trigger: AGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG...TGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTGAATCCCGTGGGACAAACTaGCACCTTGGCCGTCGTGTC +
Preference number: 4 (lower is better)
Translates to: AVYRVNYRNNLFRQGASESRGTN*HLGRRV
Trigger: GACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGA...TTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GGTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: GTASQSARPEVVASGGFDTEDSS*PDSESE
Trigger: TTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGT...ATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR GCA 90 bp GTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTACGTACACACATGCATaGTCGCTAAGCGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLPASDTTERLGPLPPPGTYTHA*SLSGRK
Trigger: CTTCCTTCCGCTTAGCGAGCATGCATGTGTGTACGT...ACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTGTGCACGTACACACATaGATGCTCGCTAAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRVHVHT*MLAKRK
Trigger: CTTCCGCTTAGCGAGCATGCATGTGTGTACGTGCAC...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GCCGCTGTGTCTGATGTGAATGAAATGACGGCCATGGTGATGCCCGAGAGGGAGACAAAAGAACGCGTGTaGGCTGGCCCTTTAAGAGCG +
Preference number: 4 (lower is better)
Translates to: AAVSDVNEMTAMVMPERETKERV*AGPLRA
Trigger: CGCTCTTAAAGGGCCAGCGCACACGCGTTCTTTTGT...CTCCCTCTCGGGCATCACCATGGCCGTCATTTCATTCACATCAGACACAGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR GCA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCACAAAAGAACGCGTGTaGGCTGGCCCTTTAAGAGCG +
Preference number: 4 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGTKERV*AGPLRA
Trigger: CGCTCTTAAAGGGCCAGCGCACACGCGTTCTTTTGT...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp AGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCCTTCCGTCAAGCCAATaGGCATCTATTAGATGCTAT +
Preference number: 4 (lower is better)
Translates to: SCAHRLTIRTPIGQNSGPLPSSQ*ASIRCY
Trigger: ATAGCATCTAATAGATGCGCATTGGCTTGACGGAAG...GGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp CCATCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGAGAATTGGGAAATCATaGCCGTTCTGGAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: PSQAWLSWDTMLGLLAVVRIGKS*PFWRVD
Trigger: GTCTACTCTCCAGAACGGCCATGATTTCCCAATTCT...CACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp CGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCAGATGAAGGGTGGCCAACCTaGAGAGCAGTTCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPEVVASGGFDETQIRPDEGWPT*RAVLGG
Trigger: GCCTCCTAGAACTGCTCTCCAGGTTGGCCACCCTTC...ATCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000446007.5
CDS-3UTR CCA 90 bp CAGCAGGTATGCAGAGCTGTGGGACAGGGAGCATCTGGAGGGCCTGGGTTACCTACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: QQVCRAVGQGASGGPGLPTTASV*MKFLSI
Trigger: GATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGT...AGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCCACAGCTCTGCATACCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTCATTCTTTTGGCTCTaGTCAGAGCGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSSFFWL*SERLDR
Trigger: CCTGTCCAGTCGCTCTGACCAGAGCCAAAAGAATGA...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLRSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPRSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp CATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: HHSQLALRWLQAEDSMRLRSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...GAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp GCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGACATTGAGGGCTTaGCTCTTTGAGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ANAAEVKEAEGLADHSFRLTLRA*LFESRS
Trigger: TGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAG...ACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CCA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCGACAAACTGCCACCTTaGCCGTCGTGTCCTCGTTTG +
Preference number: 4 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCDKLPP*PSCPRL
Trigger: CAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTC...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp CGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCTCCAGAAGTACATCGTaGTCTCACTTCCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: RRPGGWKRNDCPPVGQTASRSTS*SHFPQQ
Trigger: CTGTTGGGGGAAGTGAGACCACGATGTACTTCTGGA...GGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCAGCCTCCCAAGTGCTaGGATACAGGCCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIAQPPKC*DTGLRC
Trigger: GCATCTTAGGCCTGTATCCCAGCACTTGGGAGGCTG...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTAGAACGCGTGTGCGCTaGCCCTTTAAGAGCGATTCT +
Preference number: 4 (lower is better)
Translates to: ARRLEKKRLSSRGTNCHLRTRVR*PFKSDS
Trigger: AGAATCGCTCTTAAAGGGCCAGCGCACACGCGTTCT...AAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429084.5
ENST00000445208.5
3UTR CAA 72 bp GCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTaGTTCAGGCAGGGAGCGAGTGAAGCGTCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: AIAVYRVNYRNN*FRQGASEASSP
Trigger: TGGCGAGGACGCTTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp GTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAATTCCTGGAAGTCTTTGTAGATaGGCGGGTCCCCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VKEAEGLADHSFRLDEIPGSLCR*AGPPWR
Trigger: CCTCCAAGGGGGACCCGCTCATCTACAAAGACTTCC...AGGAATTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR TCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCGTTTTCTGAAGTTGTaGCCACCAAATAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPRFLKL*PPNRGR
Trigger: GCGGCCTCTATTTGGTGGTCACAACTTCAGAAAACG...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGCGTTTTCTGAAGTTGTaGCCACCAAATAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: PDSESEGQEAGKETTVLPRFLKL*PPNRGR
Trigger: GCGGCCTCTATTTGGTGGTCACAACTTCAGAAAACG...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCGTTTTCTGAAGTTGTaGCCACCAAATAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLRFLKL*PPNRGR
Trigger: GCGGCCTCTATTTGGTGGTCACAACTTCAGAAAACG...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp AAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTTCTGAAGTTGTaGCCACCAAATAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: KETTVLPWDKLPPWPSCPRFLKL*PPNRGR
Trigger: GCGGCCTCTATTTGGTGGTCACAACTTCAGAAAACG...AGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp CGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RYGSIAGLAELGHDVRPLAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...AAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp AAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KETTVLPWDKLPPWPSCPAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...AGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AQIQSPKARRLEKKRLSSAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...GGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 4 (lower is better)
Translates to: GWKRNDCPPVGQTATLAVRFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...GACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GGTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 4 (lower is better)
Translates to: GTASQSARPEVVASGGFDRFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...ATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp AACCTCTGCTCACTGCAGCCTCCACCACCTGGGTTCAAGCATTCTAGTACCTCAAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: NLCSLQPPPPGFKHSSTSKRPES*EPPCTR
Trigger: TCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTT...TGAGGTACTAGAATGCTTGAACCCAGGTGGTGGAGGCTGCAGTGAGCAGAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp TTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCCATCTGGAAAAGGCCTaGGAGTTGAGAGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LFPSPYRAGWTRRRPGRLHLEKA*ELRASL
Trigger: CAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATG...GAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCATCTGGAAAAGGCCTaGGAGTTGAGAGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIAHLEKA*ELRASL
Trigger: CAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATG...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTGAAAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AVYRVNYRNNLFRQGASESLRSE*HRRRCG
Trigger: GCCACAGCGACGCCTATGTCATTCGGATCTGAGGCT...TTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HSCLQGELQEQLVQAGSESWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...CTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp GCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTGAACAAGCGGGAGTGCACTaGTGCAACCTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AVYRVNYRNNLFRQGASEQAGVH*CNLCSL
Trigger: CAGTGAGCAGAGGTTGCATCAGTGCACTCCCGCTTG...TTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSTEDSS*PDSESE
Trigger: TTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGT...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLTEDSS*PDSESE
Trigger: TTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGT...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRTEDSS*PDSESE
Trigger: TTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGT...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCAACTGAGGACTCTTCCTaGCCAGATTCAGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPTEDSS*PDSESE
Trigger: TTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGT...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp GTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGCAGAGCTGTGTCTGCAGAAACACTGTaGTCCTGTTCTGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: VMSSSSSAPSTQQVCRAVSAETL*SCSGKA
Trigger: AGCTTTGCCAGAACAGGAGCACAGTGTTTCTGCAGA...CACAGCTCTGCATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp ACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTGCTCACTGCAACCTCTaGCTCTTGGATTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: TAVLPASDTTERLGPLPPAHCNL*LLDSSD
Trigger: ATCGCTTGAATCCAAGAGGCAGAGGTTGCAGTGAGC...AGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422582.5
CDS-3UTR CCA 90 bp ACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAAATCATGGCCGTTCTaGAGAGTAGACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: TELGGREDALDDSLWLHRKSWPF*RVDKKT
Trigger: CGTCTTCTTGTCTACTCTCCAGAACGGCCATGATTT...GCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp ACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGGACAGAATGAAGAATTaGGAAATCATGGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: TVLPWDKLPPWPSCPRLGDRMKN*EIMAVL
Trigger: CAGAACGGCCATGATTTCCCAATTCTTCATTCTGTC...CCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp ACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTGAGGACAGAATGAAGAATTaGGAAATCATGGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: TPRGRGRCSLTLRAWLFEDRMKN*EIMAVL
Trigger: CAGAACGGCCATGATTTCCCAATTCTTCATTCTGTC...CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp GATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGTCCTCAGCATCTCCGTaGATGTGGTCTGTACATAGC +
Preference number: 4 (lower is better)
Translates to: DSESEGQEAGKETTVLPWSSASP*MWSVHS
Trigger: GCTATGTACAGACCACATCCACGGAGATGCTGAGGA...CCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCTCCTCAGCATCTCCGTaGATGTGGTCTGTACATAGC +
Preference number: 4 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPSSASP*MWSVHS
Trigger: GCTATGTACAGACCACATCCACGGAGATGCTGAGGA...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCCTCAGCATCTCCGTaGATGTGGTCTGTACATAGC +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSSSASP*MWSVHS
Trigger: GCTATGTACAGACCACATCCACGGAGATGCTGAGGA...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CTCAGAGCCGCTAGGAAGGAAGCTCTTGAGCCGAATCTCTCCCTGCACATCCACTCCTCAGCATCTCCGTaGATGTGGTCTGTACATAGC +
Preference number: 4 (lower is better)
Translates to: LRAARKEALEPNLSLHIHSSASP*MWSVHS
Trigger: GCTATGTACAGACCACATCCACGGAGATGCTGAGGA...GTGGATGTGCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CCA 90 bp GGTCACATCGCAACTTTAGATAAACCTGGAGCCGGCCTGAGCCTCGGTCCCACTTCCTCAGCATCTCCGTaGATGTGGTCTGTACATAGC +
Preference number: 4 (lower is better)
Translates to: GHIATLDKPGAGLSLGPTSSASP*MWSVHS
Trigger: GCTATGTACAGACCACATCCACGGAGATGCTGAGGA...AGTGGGACCGAGGCTCAGGCCGGCTCCAGGTTTATCTAAAGTTGCGATGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GLGTEDSSCPDSESEGQETTASV*MKFLSI
Trigger: GATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGT...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTTCATTCTTTTGGCTCTaGTCAGAGCGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: KETTVLPWDKLPPWPSCPSFFWL*SERLDR
Trigger: CCTGTCCAGTCGCTCTGACCAGAGCCAAAAGAATGA...AGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTTCATTCTTTTGGCTCTaGTCAGAGCGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRSFFWL*SERLDR
Trigger: CCTGTCCAGTCGCTCTGACCAGAGCCAAAAGAATGA...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACTGACATTGAGGGCTTaGCTCTTTGAGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FRVRRPGGWKRNDCPPVGLTLRA*LFESRS
Trigger: TGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAG...TCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCCTGACATTGAGGGCTTaGCTCTTTGAGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSLTLRA*LFESRS
Trigger: TGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAG...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCAGATTCACAGAGCAGAATTCGGGTCCCTTaGGCCCCTCCTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VVASGGFDETQIRPDSQSRIRVP*APPLLP
Trigger: TGGGAGCAGAGGAGGGGCCCAAGGGACCCGAATTCT...GCTCTGTGAATCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp TCCTCAGCATCTCCGTGGATGTGGTCTGTACATAGCCATAGTCCAGCACTTCATCTCTGTCTCCCAGGCTaGAGTGCGGTGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: SSASPWMWSVHSHSPALHLCLPG*SAVSGS
Trigger: AGATCCGGACACCGCACTCCAGCCTGGGAGACAGAG...ATGAAGTGCTGGACTATGGCTATGTACAGACCACATCCACGGAGATGCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR CAA 72 bp AAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTCTGGATGAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: KPTLLRSKRLKG*LTTASVWMKFL
Trigger: GAGGAATTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
3UTR CAA 72 bp TTGGTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATGAGACTCAAATTCGTC +
Preference number: 4 (lower is better)
Translates to: LVPHHSQLALRW*QAEDSMRLKFV
Trigger: GACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp ACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 4 (lower is better)
Translates to: TELGGREDALDDSLWLHRGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...GCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIAAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGTCCTGGTCTTGGGACTaGGGACTCTTCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWSWSWD*GLFLPR
Trigger: TCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGGA...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTTGGTTTGTAAGTTCTaGTCCACTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSLVCKF*STAVLP
Trigger: AGGAAGGACTGCAGTGGATCAGAACTTACAAACCAA...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp TCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACTTGGTTTGTAAGTTCTaGTCCACTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SESEGQEAGKETTVLPWDLVCKF*STAVLP
Trigger: AGGAAGGACTGCAGTGGATCAGAACTTACAAACCAA...GTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp GGTCACATCGCAACTTTAGATAAACCTGGAGCCGGCCTGAGCCTCGGTCCCACTCTTCAACAGGGGCACTaGGATGATAAGGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: GHIATLDKPGAGLSLGPTLQQGH*DDKECP
Trigger: AGGACATTCCTTATCATCTCAGTGCCCCTGTTGAAG...AGTGGGACCGAGGCTCAGGCCGGCTCCAGGTTTATCTAAAGTTGCGATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR GCA 90 bp CCAGCTCCAGGGACTCCAAAAGCCAATGGCTCCCAGCCCAACTCCGGCTCCCCTAAGGAAGTTGTAGATTaGTTCCTTCATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: PAPGTPKANGSQPNSGSPKEVVD*FLHVTF
Trigger: GAAAGTGACATGAAGGAAGCAATCTACAACTTCCTT...AGGGGAGCCGGAGTTGGGCTGGGAGCCATTGGCTTTTGGAGTCCCTGGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp GCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTGAAACAGGGCAAGCGGCCTaGCTTTCCTTTCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: AVYRVNYRNNLFRQGASETGQAA*LSFLSR
Trigger: CCTGGATAGAAAGGAAAGGCAGGCCGCTTGCCCTGT...TTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp ACAAGGTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCACAGGCCTAAGATGCTaGACCTGGCCCCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TRSPAIAVYRVNYRNNLFTGLRC*TWPRAH
Trigger: ATGGGCACGGGGCCAGGTGCAGCATCTTAGGCCTGT...GAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGACCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGAGGTGCGTGCCACCATaGCTGGCTAGTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLRCVPP*LASFCI
Trigger: AATACAAAAACTAGCCAGGCATGGTGGCACGCACCT...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp ATCCAGGAGTTCGTATACCAGAGCCACATTGCGGGAGATGGTCCCCTCGCCCAGAGAATTGGGAAATCATaGCCGTTCTGGAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: IQEFVYQSHIAGDGPLAQRIGKS*PFWRVD
Trigger: GTCTACTCTCCAGAACGGCCATGATTTCCCAATTCT...CTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp CCTGGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGAGAATTGGGAAATCATaGCCGTTCTGGAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: PGLGTEDSSCPDSESEGQRIGKS*PFWRVD
Trigger: GTCTACTCTCCAGAACGGCCATGATTTCCCAATTCT...CTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCGCATCTCCGTGGATGTaGTCTGTACATAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGASPWM*SVHSHS
Trigger: ACTATGGCTATGTACAGACCACATCCACGGAGATGC...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGGCATCTCCGTGGATGTaGTCTGTACATAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLASPWM*SVHSHS
Trigger: ACTATGGCTATGTACAGACCACATCCACGGAGATGC...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCTCCTCAGCATCTCCGTaGATGTGGTCTGTACATAGC +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIASSASP*MWSVHS
Trigger: GCTATGTACAGACCACATCCACGGAGATGCTGAGGA...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CCAAACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACATCATTCTTTTGGCTCTaGTCAGAGCGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PNKPTLLRSKRLKGLLTTSFFWL*SERLDR
Trigger: CCTGTCCAGTCGCTCTGACCAGAGCCAAAAGAATGA...TGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CCA 90 bp AGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGGAAAACTTCATTCTTTTaGCTCTGGTCAGAGCGACTG +
Preference number: 4 (lower is better)
Translates to: RRRPGRLVMAPSQAWLSWKTSFF*LWSERL
Trigger: CAGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTT...CCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCTGACATTGAGGGCTTaGCTCTTTGAGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIALTLRA*LFESRS
Trigger: TGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAG...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCTGACATTGAGGGCTTaGCTCTTTGAGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCLTLRA*LFESRS
Trigger: TGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAG...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp TGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCTCTTCTTAGTAGATaGTGCCACTTCCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CPDSESEGQEAGKETTVLPLLSR*CHFPLS
Trigger: GGAAAGGGGGAAGTGGCACCATCTACTAAGAAGAGG...GAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GGTCACATCGCAACTTTAGATAAACCTGGAGCCGGCCTGAGCCTCGGTCCCACTATCGACCCGGATTCCTaGCCCATAACATTAGATGCT +
Preference number: 4 (lower is better)
Translates to: GHIATLDKPGAGLSLGPTIDPDS*PITLDA
Trigger: AGCATCTAATGTTATGGGCCAGGAATCCGGGTCGAT...AGTGGGACCGAGGCTCAGGCCGGCTCCAGGTTTATCTAAAGTTGCGATGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446007.5
CDS-3UTR TCA 90 bp CTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAACGTTTTCTGAAGTTGTaGCCACCAAATAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LRSKRLKGLLTTASVWMKRFLKL*PPNRGR
Trigger: GCGGCCTCTATTTGGTGGTCACAACTTCAGAAAACG...TTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394061.7
ENST00000445208.5
CDS-3UTR TCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIARFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp AAACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 4 (lower is better)
Translates to: KQANAAEVKEAEGLADHSRFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...GCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR TCA 90 bp CTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTAAGCGGAGGATTCGATaGGACTCAAATTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LPRFRVRRPGGWKRNDCPKRRIR*DSNSSR
Trigger: TCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTT...AGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGCCGGAAGGGGAGCGGTaGGGGGAGGTCATCGGAGAG +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQPEGER*GEVIGE
Trigger: CTCTCCGATGACCTCCCCTCACCGCTCCCCTTCCGG...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 4 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCTTCAACAGGGGCACTaGGATGATAAGGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIALQQGH*DDKECP
Trigger: AGGACATTCCTTATCATCTCAGTGCCCCTGTTGAAG...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGCCCATCTTTTCTTATaGGAAAGCCCACAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLAHLFL*ESPQCS
Trigger: AGAACACTGTGGGCTTTCTCATAAGAAAAGATGGGC...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR GCA 90 bp CACTTGTGGGGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGTGCGCATCTATTAGATaGTATCAGTACAGACAATCT +
Preference number: 4 (lower is better)
Translates to: HLWGLALPHGLKASLRNRCASIR*YQYRQS
Trigger: AGATTGTCTGTACTGATAGCATCTAATAGATGCGCA...CCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTAAATCATGGCCGTTCTaGAGAGTAGACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLKSWPF*RVDKKT
Trigger: CGTCTTCTTGTCTACTCTCCAGAACGGCCATGATTT...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGAAATCATGGCCGTTCTaGAGAGTAGACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLKSWPF*RVDKKT
Trigger: CGTCTTCTTGTCTACTCTCCAGAACGGCCATGATTT...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGAAGAATTGGGAAATCATaGCCGTTCTGGAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: FRVRRPGGWKRNDCPPVGRIGKS*PFWRVD
Trigger: GTCTACTCTCCAGAACGGCCATGATTTCCCAATTCT...TCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GGTCACATCGCAACTTTAGATAAACCTGGAGCCGGCCTGAGCCTCGGTCCCACTAGAATTGGGAAATCATaGCCGTTCTGGAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: GHIATLDKPGAGLSLGPTRIGKS*PFWRVD
Trigger: GTCTACTCTCCAGAACGGCCATGATTTCCCAATTCT...AGTGGGACCGAGGCTCAGGCCGGCTCCAGGTTTATCTAAAGTTGCGATGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp GGGAGCCACAGTAATCGCCCAGAAGGGTGGCCAACCTGGAGAGCAGTTCTAGGAGACAGAATGAAGAATTaGGAAATCATGGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: GSHSNRPEGWPTWRAVLGDRMKN*EIMAVL
Trigger: CAGAACGGCCATGATTTCCCAATTCTTCATTCTGTC...TCCTAGAACTGCTCTCCAGGTTGGCCACCCTTCTGGGCGATTACTGTGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp TCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTGACAGAATGAAGAATTaGGAAATCATGGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: SPYRAGWTRRRPGRLVMADRMKN*EIMAVL
Trigger: CAGAACGGCCATGATTTCCCAATTCTTCATTCTGTC...AGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGACAGAATGAAGAATTaGGAAATCATGGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: GLGTEDSSCPDSESEGQEDRMKN*EIMAVL
Trigger: CAGAACGGCCATGATTTCCCAATTCTTCATTCTGTC...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AGCTTCCGTCTGGATGAAATTCCTCAGCATCTCCGTGGATGTGGTCTGTACATAGAAGGGTGGCCAACCTaGAGAGCAGTTCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SFRLDEIPQHLRGCGLYIEGWPT*RAVLGG
Trigger: GCCTCCTAGAACTGCTCTCCAGGTTGGCCACCCTTC...TATGTACAGACCACATCCACGGAGATGCTGAGGAATTTCATCCAGACGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTCATTCTTTTGGCTCTaGTCAGAGCGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHSFFWL*SERLDR
Trigger: CCTGTCCAGTCGCTCTGACCAGAGCCAAAAGAATGA...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GGACGTCCATCTGGAAAAGGCCTGAGAGTTGAGAGCCTCCTTGCACCCGAGGCAAAAACTTCATTCTTTTaGCTCTGGTCAGAGCGACTG +
Preference number: 4 (lower is better)
Translates to: GRPSGKGLRVESLLAPEAKTSFF*LWSERL
Trigger: CAGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTT...TGCCTCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATGGACGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGAAAAACTTCATTCTTTTaGCTCTGGTCAGAGCGACTG +
Preference number: 4 (lower is better)
Translates to: PHHSQLALRWLQAEDSMRKTSFF*LWSERL
Trigger: CAGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTT...TCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp AGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCCTGACATTGAGGGCTTaGCTCTTTGAGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SQLALRWLQAEDSMRLKFLTLRA*LFESRS
Trigger: TGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAG...GAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CCA 90 bp CATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTGCTCCCTCTGGTCCTaGGAGTGTCCAGAAGTACAT +
Preference number: 4 (lower is better)
Translates to: HSCLQGELQEQLVQAGSECSLWS*ECPEVH
Trigger: ATGTACTTCTGGACACTCCCAGGACCAGAGGGAGCA...CTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp ACAAGGTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGCATCTGGAGGGCCTaGGTTACCTCAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: TRSPAIAVYRVNYRNNLFSIWRA*VTSEHP
Trigger: AGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCT...GAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGACCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp GTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAATTCCTAGAACGCGTGTGCGCTaGCCCTTTAAGAGCGATTCT +
Preference number: 4 (lower is better)
Translates to: VKEAEGLADHSFRLDEIPRTRVR*PFKSDS
Trigger: AGAATCGCTCTTAAAGGGCCAGCGCACACGCGTTCT...AGGAATTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR TCA 90 bp CAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGCGTTTTCTGAAGTTGTaGCCACCAAATAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QVYCNVIVLQRPIHPAGMRFLKL*PPNRGR
Trigger: GCGGCCTCTATTTGGTGGTCACAACTTCAGAAAACG...CATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTACAATAAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 4 (lower is better)
Translates to: STAVLPASDTTERLGPLPGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 4 (lower is better)
Translates to: DSESEGQEAGKETTVLPWGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...CCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCAGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 4 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp CTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 4 (lower is better)
Translates to: LPASDTTERLGPLPPPGLGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...AAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp TTTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTAGATTCACAGAGCTGTaGAACGAGACTTCATCGACC +
Preference number: 4 (lower is better)
Translates to: FISFPLQSWVDEKTPWTTRFTEL*NETSST
Trigger: GGTCGATGAAGTCTCGTTTCACAGCTCTGTGAATCT...AGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR TCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGGGGCTGCTCAGCTCCTaGGACAGGCTGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQGLLSS*DRLTTP
Trigger: AGGGGTGGTCAGCCTGTCTCAGGAGCTGAGCAGCCC...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp CTTCCCCACACAAAACTCTTCCGTCAAGCCAATGCGCATCTCAGAGCCGCTAGGTTGGTTTGTAAGTTCTaGTCCACTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPHTKLFRQANAHLRAARLVCKF*STAVLP
Trigger: AGGAAGGACTGCAGTGGATCAGAACTTACAAACCAA...CCTAGCGGCTCTGAGATGCGCATTGGCTTGACGGAAGAGTTTTGTGTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR GCA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGCAGGGATCCATTAGATaGTATCAGTACAGACAATCT +
Preference number: 4 (lower is better)
Translates to: GLGTEDSSCPDSESEGQEQGSIR*YQYRQS
Trigger: AGATTGTCTGTACTGATAGCATCTAATGGATCCCTG...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp TCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACCAGGGATCCATTAGATaGTATCAGTACAGACAATCT +
Preference number: 4 (lower is better)
Translates to: SESEGQEAGKETTVLPWDQGSIR*YQYRQS
Trigger: AGATTGTCTGTACTGATAGCATCTAATGGATCCCTG...GTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCGACAGAATGAAGAATTaGGAAATCATGGCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSDRMKN*EIMAVL
Trigger: CAGAACGGCCATGATTTCCCAATTCTTCATTCTGTC...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAATTCCTCAGCATCTCCGTGGCATCTCCGTGGATGTaGTCTGTACATAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: KGLLTTASVWMKFLSISVASPWM*SVHSHS
Trigger: ACTATGGCTATGTACAGACCACATCCACGGAGATGC...CACGGAGATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATGCATCTCCGTGGATGTaGTCTGTACATAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHASPWM*SVHSHS
Trigger: ACTATGGCTATGTACAGACCACATCCACGGAGATGC...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp CTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAAACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LRSKRLKGLLTTASVWMKTTASV*MKFLSI
Trigger: GATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGT...TTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394061.7
ENST00000445208.5
CDS-3UTR CCA 90 bp ACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTAAAACTTCATTCTTTTaGCTCTGGTCAGAGCGACTG +
Preference number: 4 (lower is better)
Translates to: TAVLPASDTTERLGPLPPKTSFF*LWSERL
Trigger: CAGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTT...AGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp TCCTCAGCATCTCCGTGGATGTGGTCTGTACATAGCCATAGTCCAGCACTTCATGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSASPWMWSVHSHSPALHAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...ATGAAGTGCTGGACTATGGCTATGTACAGACCACATCCACGGAGATGCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR TCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATAGGGCTGCTCAGCTCCTaGGACAGGCTGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQIGLLSS*DRLTTP
Trigger: AGGGGTGGTCAGCCTGTCTCAGGAGCTGAGCAGCCC...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp CACTGCTCCCTCTGGTCCTGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCAGGGATCCATTAGATaGTATCAGTACAGACAATCT +
Preference number: 4 (lower is better)
Translates to: HCSLWSWECPEVHRGLTSQGSIR*YQYRQS
Trigger: AGATTGTCTGTACTGATAGCATCTAATGGATCCCTG...GGAAGTGAGACCACGATGTACTTCTGGACACTCCCAGGACCAGAGGGAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359593.9
CDS-3UTR GCA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCCAGGGATCCATTAGATaGTATCAGTACAGACAATCT +
Preference number: 4 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSQGSIR*YQYRQS
Trigger: AGATTGTCTGTACTGATAGCATCTAATGGATCCCTG...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp ACAGCTTCCGTCTGGATGAAATTCCTCAGCATCTCCGTGGATGTGGTCTGTACAGCTCACTGCAACCTCTaGCTCTTGGATTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: TASVWMKFLSISVDVVCTAHCNL*LLDSSD
Trigger: ATCGCTTGAATCCAAGAGGCAGAGGTTGCAGTGAGC...TGTACAGACCACATCCACGGAGATGCTGAGGAATTTCATCCAGACGGAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCAAAACTTCATTCTTTTaGCTCTGGTCAGAGCGACTG +
Preference number: 4 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCKTSFF*LWSERL
Trigger: CAGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTT...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCAAGGTCCTGGGGGCCCTaGGACGTCCATCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: KVWFVSSDPLQSFLHQIPRSWGP*DVHLEK
Trigger: CTTTTCCAGATGGACGTCCCAGGGCCCCCAGGACCT...TGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGTCCAGAAGTACATCGTaGTCTCACTTCCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWSRSTS*SHFPQQ
Trigger: CTGTTGGGGGAAGTGAGACCACGATGTACTTCTGGA...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp ACAAGGTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCTGCTCCCTCTGGTCCTaGGAGTGTCCAGAAGTACAT +
Preference number: 4 (lower is better)
Translates to: TRSPAIAVYRVNYRNNLFCSLWS*ECPEVH
Trigger: ATGTACTTCTGGACACTCCCAGGACCAGAGGGAGCA...GAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp CTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTCTGGATGAAAGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 4 (lower is better)
Translates to: LRSKRLKGLLTTASVWMKGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...TTTCATCCAGACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394061.7
ENST00000445208.5
CDS-3UTR TCA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGAAGCGGAGGATTCGATaGGACTCAAATTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWKRRIR*DSNSSR
Trigger: TCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTT...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp AAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCAAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KVWFVSSDPLQSFLHQIPSLRSE*HRRRCG
Trigger: GCCACAGCGACGCCTATGTCATTCGGATCTGAGGCT...TGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCCAGGGATCCATTAGATaGTATCAGTACAGACAATCT +
Preference number: 4 (lower is better)
Translates to: LFPSPYRAGWTRRRPGRLQGSIR*YQYRQS
Trigger: AGATTGTCTGTACTGATAGCATCTAATGGATCCCTG...GAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR GCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGCCTTCTGCTCTGGGCTaGTCAGCTCCTGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQPSALG*SAPETG
Trigger: GCCTGTCTCAGGAGCTGAGCAGCCCAGAGCAGAAGG...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp GCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTAAGGAAGTTGTAGATTaGTTCCTTCATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: ARRLEKKRLSSRGTNCHLKEVVD*FLHVTF
Trigger: GAAAGTGACATGAAGGAAGCAATCTACAACTTCCTT...AAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000429084.5
CDS-3UTR CCA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGACCACAGCTTCCGTCTaGATGAAATTCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWTTASV*MKFLSI
Trigger: GATGCTGAGGAATTTCATCCAGACGGAAGCTGTGGT...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATAAAACTTCATTCTTTTaGCTCTGGTCAGAGCGACTG +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHKTSFF*LWSERL
Trigger: CAGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTT...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGCTGAGGAATCGGACCTaGAGGCCAGAGCACGTGTGC +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQLRNRT*RPEHVC
Trigger: GCACACGTGCTCTGGCCTCCAGGTCCGATTCCTCAG...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGGGAAGTCTTTGTAGATaGGCGGGTCCCCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQGSLCR*AGPPWR
Trigger: CCTCCAAGGGGGACCCGCTCATCTACAAAGACTTCC...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp TCCTCAGCATCTCCGTGGATGTGGTCTGTACATAGCCATAGTCCAGCACTTCATAAATCATGGCCGTTCTaGAGAGTAGACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: SSASPWMWSVHSHSPALHKSWPF*RVDKKT
Trigger: CGTCTTCTTGTCTACTCTCCAGAACGGCCATGATTT...ATGAAGTGCTGGACTATGGCTATGTACAGACCACATCCACGGAGATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGACGACTGTCCTCCCGTaGGACAAACTGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQTTVLP*DKLPPW
Trigger: CCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGT...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp AAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCAAGGAGAACCCCTGTGTaGGACAGGCACTTGCACACA +
Preference number: 4 (lower is better)
Translates to: KVWFVSSDPLQSFLHQIPRRTPV*DRHLHT
Trigger: TGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCCT...TGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACTCTGTCTCCCAGGCTaGAGTGCGGTGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQILCLPG*SAVSGS
Trigger: AGATCCGGACACCGCACTCCAGCCTGGGAGACAGAG...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422582.5
CDS-3UTR TCA 90 bp AGCCTGACATTGAGGGCTTGGCTCTTTGAGAGCAGGTCACATCGCAACTTTAGAGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 4 (lower is better)
Translates to: SLTLRAWLFESRSHRNFRGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...TCTAAAGTTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR TCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGGAGGGCTTGGCTCTTTaGGAGCAGGTCACATCGCAA +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQEGLAL*EQVTSQ
Trigger: TTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTC...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR GCA 90 bp TCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATAAGGAAGTTGTAGATTaGTTCCTTCATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: SDPLQSFLHQIPQKGWAHKEVVD*FLHVTF
Trigger: GAAAGTGACATGAAGGAAGCAATCTACAACTTCCTT...ATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000429084.5
CDS-3UTR CCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATATGTCGCACCCACTTGTaGGGGTTGGCATTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQICRTHL*GLALPH
Trigger: ATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACA...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATAATACCACAGAAAGGCTaGGCCCATTGCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQIIPQKG*AHCPLL
Trigger: CAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTAT...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR TCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGGCAGTTCTAGGAGGCTaGAGGGAGAAACGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQAVLGG*REKRFL
Trigger: CAGAAAACGTTTCTCCCTTCAGCCTCCTAGAACTGC...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATAAGGTCATCGGAGAGTTaGTACCGCATCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQIRSSES*YRITVS
Trigger: GCTGACTGTGATGCGGTACCAACTCTCCGATGACCT...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp AAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCAAGAATTGGGAAATCATaGCCGTTCTGGAGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: KVWFVSSDPLQSFLHQIPRIGKS*PFWRVD
Trigger: GTCTACTCTCCAGAACGGCCATGATTTCCCAATTCT...TGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR GCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATATCTGCAGAAACACTGTaGTCCTGTTCTGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQISAETL*SCSGKA
Trigger: AGCTTTGCCAGAACAGGAGCACAGTGTTTCTGCAGA...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR TCA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGGGGAGAAACGTTTTCTaGAGTTGTGACCACCAAATA +
Preference number: 4 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQGRNVF*SCDHQI
Trigger: TATTTGGTGGTCACAACTTCAGAAAACGTTTCTCCC...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR TCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATATTGGTTTGTAAGTTCTaGTCCACTGCAGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQILVCKF*STAVLP
Trigger: AGGAAGGACTGCAGTGGATCAGAACTTACAAACCAA...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CCA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATAAAATCATGGCCGTTCTaGAGAGTAGACAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQIKSWPF*RVDKKT
Trigger: CGTCTTCTTGTCTACTCTCCAGAACGGCCATGATTT...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS TCA 90 bp CCCGGCCGCCACTGTCCCCGCGGACTGGCGGGTGGAAGGACTCAGTaGAGGATCCTGCGACACAGGCTGGCCCTGGGCGCCCCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: PGRHCPRGLAGGRTQ*RILRHRLALGAPPA
Trigger: GGCGGGAGGGGCGCCCAGGGCCAGCCTGTGTCGCAGGATCCTTCACTGAGTCCTTCCACCCGCCAGTCCGCGGGGACAGTGGCGGCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463195.5
CDS TCA 90 bp CCGACGGGACCCCGCTCCTCACCCGCCTCCCGCCACTGGTTACCATaGCAACCGGGGACTCGTCTCCTGGCAGTCCCGTCAGCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: PTGPRSSPASRHWLP*QPGTRLLAVPSASG
Trigger: ACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGGTAACCAGTGGCGGGAGGCGGGTGAGGAGCGGGGTCCCGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478501.5
CDS CCA 90 bp GGCGCCCGCCACCACGCCCAGCATGACAACCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCGGCCACATCCCG +
Preference number: 5 (lower is better)
Translates to: GARHHAQHDNRGLVS*QSRQLPVEELGHIP
Trigger: CGGGATGTGGCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGCTGGGCGTGGTGGCGGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CAA 90 bp GGGACAGGGAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: GTGSIWRAWVTSEHPGEATHLWG*ALPHGL
Trigger: CAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGT...GGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTCCCTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS CCA 90 bp CCGCCTCCCGCCACTGGTTACCATGACAACCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCGGCCACATCCCG +
Preference number: 5 (lower is better)
Translates to: PPPATGYHDNRGLVS*QSRQLPVEELGHIP
Trigger: CGGGATGTGGCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGGTAACCAGTGGCGGGAGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429084.5
ENST00000463195.5
ENST00000478501.5
CDS GCA 90 bp ATGGCCGTTCTGGAGAGTAGACAAGAAGACGGCGAAAGTCGGGCCTaGCCCGCCCTGCGGCCCCGGAACAAAAGAACGCGTGTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: MAVLESRQEDGESRA*PALRPRNKRTRVRW
Trigger: CCAGCGCACACGCGTTCTTTTGTTCCGGGGCCGCAGGGCGGGGCAGGCCCGACTTTCGCCGTCTTCTTGTCTACTCTCCAGAACGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394061.7
ENST00000429084.5
ENST00000438383.5
ENST00000439416.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGGAGTTGAGAGCCTCCTaGCACCCGAGGCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: ALPHGLKASLRNRTWRPEELRAS*HPRQVP
Trigger: TGGGACCTGCCTCGGGTGCAAGGAGGCTCTCAACTC...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGAGGTGTCGCACCCACTaGTGGGGGTTGGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: ALPHGLKASLRNRTWRPERCRTH*WGLALP
Trigger: CGGCAATGCCAACCCCCACAAGTGGGTGCGACACCT...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp CCACCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: PPSPACSPSSSWSPPPPPGQTAT*AVVSSF
Trigger: AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCC...CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp GGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GSGEGRSSESWYRITVSSERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...CGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGCTGCTGGGGGCCACTTaGCTCTGTTGTGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ALPHGLKASLRNRTWRPELLGAT*LCCVSA
Trigger: GGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCAG...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp CACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCCTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATG +
Preference number: 5 (lower is better)
Translates to: HRLTIRTPIGQNSGPLGPLALRW*QAEDSM
Trigger: CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAG...GGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp GCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: AGWTRRRPGRLVMAPSQALWGLA*PHGLKA
Trigger: GGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAA...AGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GAGCATCTGGAGGGCCTGGGTTACCTCAGAGCACCCTGGGGAGGCCCAGGAGTACCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 5 (lower is better)
Translates to: EHLEGLGYLRAPWGGPGVPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...TACTCCTGGGCCTCCCCAGGGTGCTCTGAGGTAACCCAGGCCCTCCAGATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp GTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 5 (lower is better)
Translates to: VLPWDKLPPWPSCPRLGSPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...GCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GCAGGTCAACAGGACCACTCTGACCATCACGCAGGTCCGTGGCCGGGTGGGGAGGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: AGQQDHSDHHAGPWPGGEGQTAT*AVVSSF
Trigger: AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCC...CTCCCCACCCGGCCACGGACCTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp CAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGCCTCGCACCCCTGGCTaGCTGAAGGTTCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: QAALQAQQVNRTTLTITQPRTPG*LKVPGS
Trigger: GGAGCCAGGAACCTTCAGCAAGCCAGGGGTGCGAGG...CTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp CTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTCAGAATTCGGGTCCCTaGGGCCCCTCCTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: LTIRTPIGQNSGPLGPSSQNSGP*GPSSAP
Trigger: GGGAGCAGAGGAGGGGCCCAAGGGACCCGAATTCTG...AGAGGAGGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp CCACCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGGGCCACTTTGCTCTGTaGTGTCTCAGCCCCAAACAA +
Preference number: 5 (lower is better)
Translates to: PPSPACSPSSSWSPPPPPGHFAL*CLSPKQ
Trigger: TTGTTTGGGGCTGAGACACAACAGAGCAAAGTGGCC...CGGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTGCACGCTGGGGACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp GCTCCATCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCCTGCTGGGGGCCACTTaGCTCTGTTGTGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: APSQAWLSWDTMLGLLAVLLGAT*LCCVSA
Trigger: GGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCAG...GACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp ACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCGAGTTGAGAGCCTCCTaGCACCCGAGGCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: TRRRPGRLVMAPSQAWLSELRAS*HPRQVP
Trigger: TGGGACCTGCCTCGGGTGCAAGGAGGCTCTCAACTC...GCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS TCA 90 bp GCCTCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATaGCATAGGCGTCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGG +
Preference number: 5 (lower is better)
Translates to: ASWPSCPRLGSLRSE*HRRRCGLGVAPTCG
Trigger: CCCACAAGTGGGTGCGACACCTAAGCCACAGCGACGCCTATGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS CCA 90 bp GAAATGACGGCCATGGTGATGCATGACAACCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCGGCCACATCCCG +
Preference number: 5 (lower is better)
Translates to: EMTAMVMHDNRGLVS*QSRQLPVEELGHIP
Trigger: CGGGATGTGGCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGCATCACCATGGCCGTCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000421755.5
ENST00000439416.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp ACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTTTATACCAGAGCCACATaGCGGGAGATGGTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: TTPRGRGRCSLTLRAWLFYTRAT*REMVPS
Trigger: CGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA...AAAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000446007.5
CDS-3UTR CAA 90 bp TCGCAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: SQAWLSWDTMLGLLAVVSKRLKG*LTTASV
Trigger: GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...GGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAGCTCGCCCTAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: AVRGGHRRVGTASQSARPKRLKG*LTTASV
Trigger: GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...AGGGCGAGCTGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp TGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGCTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATG +
Preference number: 5 (lower is better)
Translates to: WTRRRPGRLVMAPSQAWLLALRW*QAEDSM
Trigger: CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAG...CAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTGGCTCTTGAGGTCATCGGAGAGTaGGTACCGCATCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: DHPSRQGEVQPDIEGLALEVIGE*VPHHSQ
Trigger: CTGACTGTGATGCGGTACCAACTCTCCGATGACCTC...AAGAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp TCGCACCCACTTGTGGGGGTTGGCATTGCCGCATGGCCTGAAGGCCAGCCTGAGAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: SHPLVGVGIAAWPEGQPERCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...CTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GCATTGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAGGCCAGAGAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: ALPHGLKASLRNRTWRPERCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...CTCTGGCCTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GLGTEDSSCPDSESEGQELWGLA*PHGLKA
Trigger: GGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAA...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: VLPASDTTERLGPLPPPGLWGLA*PHGLKA
Trigger: GGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAA...ACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSTHLWG*ALPHGL
Trigger: CAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGT...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: SPYRAGWTRRRPGRLVMATHLWG*ALPHGL
Trigger: CAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGT...AGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: GLGTEDSSCPDSESEGQETHLWG*ALPHGL
Trigger: CAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGT...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp ACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATGACAACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: TATLAVVSSFGEPQIRMTTHLWG*ALPHGL
Trigger: CAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGT...TGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GGACGTCCATCTGGAAAAGGCCTGAGAGTTGAGAGCCTCCTTGCACCCGAGGCAAGGTGTCGCACCCACTaGTGGGGGTTGGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: GRPSGKGLRVESLLAPEARCRTH*WGLALP
Trigger: CGGCAATGCCAACCCCCACAAGTGGGTGCGACACCT...TGCCTCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGATGGACGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp CCTGGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGAGGTGTCGCACCCACTaGTGGGGGTTGGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: PGLGTEDSSCPDSESEGQRCRTH*WGLALP
Trigger: CGGCAATGCCAACCCCCACAAGTGGGTGCGACACCT...CTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TGGCAAAGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: WQSCAHRLTIRTPIGQNSCPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...CGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp ACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: TAVLPASDTTERLGPLPPERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...AGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: PDSESEGQEAGKETTVLPERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGGTCTTGCCTCGCACCCCTGGCTaGCTGAAGGTTCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: FLHQIPQKGWAHCPLLVLPRTPG*LKVPGS
Trigger: GGAGCCAGGAACCTTCAGCAAGCCAGGGGTGCGAGG...CAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS CCA 90 bp GGTCTGTACATAGCCATAGTCCATGACAACCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCGGCCACATCCCG +
Preference number: 5 (lower is better)
Translates to: GLYIAIVHDNRGLVS*QSRQLPVEELGHIP
Trigger: CGGGATGTGGCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGGACTATGGCTATGTACAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438383.5
CDS-3UTR CAA 90 bp AGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGGTATACCAGAGCCACATaGCGGGAGATGGTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: RRRPGRLVMAPSQAWLSWYTRAT*REMVPS
Trigger: CGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA...CCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTCAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: GEPLCGTGTCTQPHVPSVKRLKG*LTTASV
Trigger: GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...GACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCCTGCTGGGGGCCACTTaGCTCTGTTGTGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSLLGAT*LCCVSA
Trigger: GGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCAG...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp CAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCTCGGAGGTCATCGGAGAGTaGGTACCGCATCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: QAWLSWDTMLGLLAVVSSEVIGE*VPHHSQ
Trigger: CTGACTGTGATGCGGTACCAACTCTCCGATGACCTC...CGAGGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp ACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGGAGGTCATCGGAGAGTaGGTACCGCATCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: TVLPWDKLPPWPSCPRLGEVIGE*VPHHSQ
Trigger: CTGACTGTGATGCGGTACCAACTCTCCGATGACCTC...CCCCAAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp AGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTGAGTTGAGAGCCTCCTaGCACCCGAGGCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: RLEKKRLSSRGTNCHLGRELRAS*HPRQVP
Trigger: TGGGACCTGCCTCGGGTGCAAGGAGGCTCTCAACTC...ACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: AQIQSPKARRLEKKRLSSLWGLA*PHGLKA
Trigger: GGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAA...GGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: STAVLPASDTTERLGPLPLWGLA*PHGLKA
Trigger: GGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAA...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCAGGTGTCGCACCCACTaGTGGGGGTTGGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: AQIQSPKARRLEKKRLSSRCRTH*WGLALP
Trigger: CGGCAATGCCAACCCCCACAAGTGGGTGCGACACCT...GGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 5 (lower is better)
Translates to: SPYRAGWTRRRPGRLVMAPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...AGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGCCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 5 (lower is better)
Translates to: GLGTEDSSCPDSESEGQEPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSCPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACAGCCCATCGTCAAGTaGGTCTCCACCGCCACCACC +
Preference number: 5 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPQPIVK*VSTATT
Trigger: GGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTG...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS GCA 90 bp CCCAGGCTGGAGTGCGGTGTCCGGATCTCGGCTCACTGCAACCTCTaGCTCTTGGATTCAAGCGATTCTCAAGCCTCAGCTTCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: PRLECGVRISAHCNL*LLDSSDSQASASRV
Trigger: TACTCGGGAAGCTGAGGCTTGAGAATCGCTTGAATCCAAGAGGCAGAGGTTGCAGTGAGCCGAGATCCGGACACCGCACTCCAGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394061.7
ENST00000422582.5
ENST00000478501.5
ENST00000495154.1
CDS CCA 90 bp ACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTaGCTGAGCTGGGACACGATGTTAGGCCTCTGGAAAAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: TRRRPGRLVMAPSQA*LSWDTMLGLWKRPE
Trigger: CTCAGGCCTTTTCCAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450807.5
CDS-3UTR CAA 90 bp GAGTTCGTATACCAGAGCCACATTGCGGGAGATGGTCCCCTCGCCCAGGGAGCCATGAGCGGGTCCCCCTaGGAGGACAGAATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: EFVYQSHIAGDGPLAQGAMSGSP*EDRMKN
Trigger: ATTCTTCATTCTGTCCTCCAAGGGGGACCCGCTCAT...GGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CAA 90 bp GCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCCGTAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: ANAAEVKEAEGLADHSFRKRLKG*LTTASV
Trigger: GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...ACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394061.7
ENST00000445208.5
CDS-3UTR CAA 90 bp CGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: RRPGGWKRNDCPPVGQTAKRLKG*LTTASV
Trigger: GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...GGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: GWKRNDCPPVGQTATLAVKRLKG*LTTASV
Trigger: GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...GACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCTGCTGGGGGCCACTTaGCTCTGTTGTGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: STAVLPASDTTERLGPLPLLGAT*LCCVSA
Trigger: GGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCAG...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GGTCACATCGCAACTTTAGATAAACCTGGAGCCGGCCTGAGCCTCGGTCCCACTCTGCTGGGGGCCACTTaGCTCTGTTGTGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GHIATLDKPGAGLSLGPTLLGAT*LCCVSA
Trigger: GGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCAG...AGTGGGACCGAGGCTCAGGCCGGCTCCAGGTTTATCTAAAGTTGCGATGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp TGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGCTAGGAAGGAAGCTCTaGAGCCGAATCTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: WVDEKTPWTTRYGSIAGLLGRKL*SRISPC
Trigger: GCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAG...CAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp TGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAACTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATG +
Preference number: 5 (lower is better)
Translates to: WECPEVHRGLTSPNRGGQLALRW*QAEDSM
Trigger: CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAG...TTGCCCTCCCCTGTTGGGGGAAGTGAGACCACGATGTACTTCTGGACACTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCCTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATG +
Preference number: 5 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSLALRW*QAEDSM
Trigger: CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAG...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp CTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTGAGGTCATCGGAGAGTaGGTACCGCATCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: LTIRTPIGQNSGPLGPSSEVIGE*VPHHSQ
Trigger: CTGACTGTGATGCGGTACCAACTCTCCGATGACCTC...AGAGGAGGGGCCCAAGGGACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp CAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACGCAGGAGGTCATCGGAGAGTaGGTACCGCATCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: QAALQAQQVNRTTLTITQEVIGE*VPHHSQ
Trigger: CTGACTGTGATGCGGTACCAACTCTCCGATGACCTC...CTGCGTGATGGTCAGAGTGGTCCTGTTGACCTGCTGAGCCTGCAGAGCAGCCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp ATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCGAGTTGAGAGCCTCCTaGCACCCGAGGCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: IHCSPSCIRYHRKAGPIAELRAS*HPRQVP
Trigger: TGGGACCTGCCTCGGGTGCAAGGAGGCTCTCAACTC...GGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCGAGTTGAGAGCCTCCTaGCACCCGAGGCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: CPDSESEGQEAGKETTVLELRAS*HPRQVP
Trigger: TGGGACCTGCCTCGGGTGCAAGGAGGCTCTCAACTC...GAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp CCAAACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGAGTTGAGAGCCTCCTaGCACCCGAGGCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: PNKPTLLRSKRLKGLLTTELRAS*HPRQVP
Trigger: TGGGACCTGCCTCGGGTGCAAGGAGGCTCTCAACTC...TGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CAA 90 bp TGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCAGGTGTCGCACCCACTaGTGGGGGTTGGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: CPDSESEGQEAGKETTVLRCRTH*WGLALP
Trigger: CGGCAATGCCAACCCCCACAAGTGGGTGCGACACCT...GAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCCCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 5 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 5 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCGTCGTGTCCTCGTTaGGGGAGCCTCAGATCCGAA +
Preference number: 5 (lower is better)
Translates to: STAVLPASDTTERLGPLPPSCPR*GSLRSE
Trigger: TTCGGATCTGAGGCTCCCCAAACGAGGACACGACGG...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp ACTGCCACCTTGGCCGTCGTGTCCTCGTTTGGGGAGCCTCAGATCCGAATGACAGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: TATLAVVSSFGEPQIRMTGQTAT*AVVSSF
Trigger: AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCC...TGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGGTGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416938.5
ENST00000445208.5
CDS-3UTR CAA 90 bp CCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PDSESEGQEAGKETTVLPCPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...CGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp AAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: KETTVLPWDKLPPWPSCPCPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...AGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp ACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: TAVLPASDTTERLGPLPPCPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...AGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp CGTCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGGGGTTGGCATTGCCGCATGATTTTGGCCAGGCTCTaGACCTCAAGTGATCCACCC +
Preference number: 5 (lower is better)
Translates to: RRCGLGVAPTCGGWHCRMILARL*TSSDPP
Trigger: GGGTGGATCACTTGAGGTCAAGAGCCTGGCCAAAAT...CATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCACAGCGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416938.5
CDS-3UTR CAA 90 bp CCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCACGATGTTAGGCCTCTaGGCCGTCGTGTCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: PLTELGGREDALDDSLWLTMLGL*AVVSSF
Trigger: AAACGAGGACACGACGGCCAAGAGGCCTAACATCGT...GAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS GCA 90 bp CTAGTCTCAGCACTTCATCCAGGAGTTCGTATACCAGAGCCACATTaGGGGAGATGGTCCCCTCGCCCAGGGAGCCACAGTAATCGCCCA +
Preference number: 5 (lower is better)
Translates to: LVSALHPGVRIPEPH*GRWSPRPGSHSNRP
Trigger: TGGGCGATTACTGTGGCTCCCTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGATGAAGTGCTGAGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495154.1
CDS-3UTR CAA 90 bp CAAAGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTATGAGCGGGTCCCCCTaGGAGGACAGAATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: QSCAHRLTIRTPIGQNSGMSGSP*EDRMKN
Trigger: ATTCTTCATTCTGTCCTCCAAGGGGGACCCGCTCAT...ACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359593.9
CDS-3UTR CAA 90 bp CTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTATGAGCGGGTCCCCCTaGGAGGACAGAATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LGGREDALDDSLWLHRRLMSGSP*EDRMKN
Trigger: ATTCTTCATTCTGTCCTCCAAGGGGGACCCGCTCAT...AAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp TGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAATATACCAGAGCCACATaGCGGGAGATGGTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: WECPEVHRGLTSPNRGGQYTRAT*REMVPS
Trigger: CGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA...TTGCCCTCCCCTGTTGGGGGAAGTGAGACCACGATGTACTTCTGGACACTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCTATACCAGAGCCACATaGCGGGAGATGGTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: STAVLPASDTTERLGPLPYTRAT*REMVPS
Trigger: CGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CAA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGTATACCAGAGCCACATaGCGGGAGATGGTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLYTRAT*REMVPS
Trigger: CGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CAA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGKRLKG*LTTASV
Trigger: GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GGAGAACCCCTGTGTGGGACAGGCACTTGCACACAGCCACATGTGCCCTCAGTCGGCCACTTTGCTCTGTaGTGTCTCAGCCCCAAACAA +
Preference number: 5 (lower is better)
Translates to: GEPLCGTGTCTQPHVPSVGHFAL*CLSPKQ
Trigger: TTGTTTGGGGCTGAGACACAACAGAGCAAAGTGGCC...GACTGAGGGCACATGTGGCTGTGTGCAAGTGCCTGTCCCACACAGGGGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp TGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGGGCCACTTTGCTCTGTaGTGTCTCAGCCCCAAACAA +
Preference number: 5 (lower is better)
Translates to: WTRRRPGRLVMAPSQAWLGHFAL*CLSPKQ
Trigger: TTGTTTGGGGCTGAGACACAACAGAGCAAAGTGGCC...CAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp CCTGGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGCTAGGAAGGAAGCTCTaGAGCCGAATCTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: PGLGTEDSSCPDSESEGQLGRKL*SRISPC
Trigger: GCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAG...CTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp TGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATG +
Preference number: 5 (lower is better)
Translates to: CPDSESEGQEAGKETTVLLALRW*QAEDSM
Trigger: CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAG...GAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCACTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATG +
Preference number: 5 (lower is better)
Translates to: ARPEVVASGGFDETQIRPLALRW*QAEDSM
Trigger: CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAG...TGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp TCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: SPYRAGWTRRRPGRLVMARCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...AGCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: GWKRNDCPPVGQTATLAVRCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...GACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp CCTGGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: PGLGTEDSSCPDSESEGQRCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...CTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: VPHHSQLALRWLQAEDSMRCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp TTTATTTCCTTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTAGGTGTCGCACCCACTaGTGGGGGTTGGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: FISFPLQSWVDEKTPWTTRCRTH*WGLALP
Trigger: CGGCAATGCCAACCCCCACAAGTGGGTGCGACACCT...AGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAAGGAAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp AGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: RRLEKKRLSSRGTNCHLGGQTAT*AVVSSF
Trigger: AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCC...GCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGTGAACAGAATTCGGGTCCCTaGGGCCCCTCCTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: AVYRVNYRNNLFRQGASEQNSGP*GPSSAP
Trigger: GGGAGCAGAGGAGGGGCCCAAGGGACCCGAATTCTG...TTCACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp CAAAGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTATTTTGGCCAGGCTCTaGACCTCAAGTGATCCACCC +
Preference number: 5 (lower is better)
Translates to: QSCAHRLTIRTPIGQNSGILARL*TSSDPP
Trigger: GGGTGGATCACTTGAGGTCAAGAGCCTGGCCAAAAT...ACCCGAATTCTGCCCGATAGGCGTCCTGATTGTCAGGCGGTGGGCGCAGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp CCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGAATGAGCGGGTCCCCCTaGGAGGACAGAATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PHHSQLALRWLQAEDSMRMSGSP*EDRMKN
Trigger: ATTCTTCATTCTGTCCTCCAAGGGGGACCCGCTCAT...TCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp CCAGCACTTCATCCAGGAGTTCGTATACCAGAGCCACATTGCGGGAGATGGTCCTATACCAGAGCCACATaGCGGGAGATGGTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: PALHPGVRIPEPHCGRWSYTRAT*REMVPS
Trigger: CGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA...GGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGATGAAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CAA 90 bp TGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTCCGGCCACTTTGCTCTGTaGTGTCTCAGCCCCAAACAA +
Preference number: 5 (lower is better)
Translates to: CSPSCIRYHRKAGPIAPSGHFAL*CLSPKQ
Trigger: TTGTTTGGGGCTGAGACACAACAGAGCAAAGTGGCC...GGAGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GGTACCGCATCACAGTCAGCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGGCCACTTTGCTCTGTaGTGTCTCAGCCCCAAACAA +
Preference number: 5 (lower is better)
Translates to: GTASQSARPEVVASGGFDGHFAL*CLSPKQ
Trigger: TTGTTTGGGGCTGAGACACAACAGAGCAAAGTGGCC...ATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGCTGACTGTGATGCGGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCCTAGGAAGGAAGCTCTaGAGCCGAATCTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPLGRKL*SRISPC
Trigger: GCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAG...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GCTCTGACTTCCCCACACAAAACTCTTCCGTCAAGCCAATGCGCATCTCAGAGCCTCGCCCTGAGGTGGTaGCAAGCGGAGGATTCGATG +
Preference number: 5 (lower is better)
Translates to: ALTSPHKTLPSSQCASQSLALRW*QAEDSM
Trigger: CATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAG...GCTCTGAGATGCGCATTGGCTTGACGGAAGAGTTTTGTGTGGGGAAGTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CAA 90 bp AAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCTGAGGTCATCGGAGAGTaGGTACCGCATCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: KETTVLPWDKLPPWPSCPEVIGE*VPHHSQ
Trigger: CTGACTGTGATGCGGTACCAACTCTCCGATGACCTC...AGGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp CCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGAGGTCATCGGAGAGTaGGTACCGCATCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: PRFRVRRPGGWKRNDCPPEVIGE*VPHHSQ
Trigger: CTGACTGTGATGCGGTACCAACTCTCCGATGACCTC...GGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp CAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGAGGTGTCGCACCCACTaGTGGGGGTTGGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: QVYCNVIVLQRPIHPAGMRCRTH*WGLALP
Trigger: CGGCAATGCCAACCCCCACAAGTGGGTGCGACACCT...CATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTACAATAAACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp CATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCAGGCAGGGAGCGAGCAGCCCATCGTCAAGTaGGTCTCCACCGCCACCACC +
Preference number: 5 (lower is better)
Translates to: HSCLQGELQEQLVQAGSEQPIVK*VSTATT
Trigger: GGTGGTGGCGGTGGAGACCAACTTGACGATGGGCTG...CTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCGGCCACTTTGCTCTGTaGTGTCTCAGCCCCAAACAA +
Preference number: 5 (lower is better)
Translates to: STAVLPASDTTERLGPLPGHFAL*CLSPKQ
Trigger: TTGTTTGGGGCTGAGACACAACAGAGCAAAGTGGCC...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GCTCGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCACTAGGAAGGAAGCTCTaGAGCCGAATCTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: ARPEVVASGGFDETQIRPLGRKL*SRISPC
Trigger: GCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAG...TGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CAA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCRCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGACCCACTTGTGGGGGTaGGCATTGCCGCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWTHLWG*ALPHGL
Trigger: CAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGT...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCATGAGCGGGTCCCCCTaGGAGGACAGAATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCMSGSP*EDRMKN
Trigger: ATTCTTCATTCTGTCCTCCAAGGGGGACCCGCTCAT...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp AACAAGCCAACGCTGCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTGGCCACTTTGCTCTGTaGTGTCTCAGCCCCAAACAA +
Preference number: 5 (lower is better)
Translates to: NKPTLLRSKRLKGLLTTAGHFAL*CLSPKQ
Trigger: TTGTTTGGGGCTGAGACACAACAGAGCAAAGTGGCC...AGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGCGTTGGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394061.7
ENST00000445208.5
CDS-3UTR CAA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGCTGCTGGGGGCCACTTaGCTCTGTTGTGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWLLGAT*LCCVSA
Trigger: GGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCAG...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp AGCCTGACATTGAGGGCTTGGCTCTTTGAGAGCAGGTCACATCGCAACTTTAGACTGCTGGGGGCCACTTaGCTCTGTTGTGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SLTLRAWLFESRSHRNFRLLGAT*LCCVSA
Trigger: GGCTGAGACACAACAGAGCAAAGTGGCCCCCAGCAG...TCTAAAGTTGCGATGTGACCTGCTCTCAAAGAGCCAAGCCCTCAATGTCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp CTGCCCAGATTCAGAGTCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCGGAGTTTCACCATGTaGGCCAGGCTGATTTCGAAC +
Preference number: 5 (lower is better)
Translates to: LPRFRVRRPGGWKRNDCPRSFTM*ARLISN
Trigger: GTTCGAAATCAGCCTGGCCAACATGGTGAAACTCCG...AGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGACTCTGAATCTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422582.5
CDS-3UTR CAA 90 bp ATCCAGGAGTTCGTATACCAGAGCCACATTGCGGGAGATGGTCCCCTCGCCCAGGGACAGAATGAAGAATaGGGAAATCATGGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: IQEFVYQSHIAGDGPLAQGQNEE*GNHGRS
Trigger: AGAACGGCCATGATTTCCCAATTCTTCATTCTGTCC...CTGGGCGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATACGAACTCCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS-3UTR CAA 90 bp GCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTTGGCCGTCGTGTCCTCGTTTGGACAGAATGAAGAATaGGGAAATCATGGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: AWLSWDTMLGLLAVVSSFGQNEE*GNHGRS
Trigger: AGAACGGCCATGATTTCCCAATTCTTCATTCTGTCC...AAACGAGGACACGACGGCCAAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWKRLKG*LTTASV
Trigger: GACGGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GGAAGGGGAGCGGTGAGGGGAGGTCATCGGAGAGTTGGTACCGCATCACAGTCAAAAAACTTCATTCTTTaGGCTCTGGTCAGAGCGACT +
Preference number: 5 (lower is better)
Translates to: GRGAVRGGHRRVGTASQSKNFIL*ALVRAT
Trigger: AGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTTT...TGACTGTGATGCGGTACCAACTCTCCGATGACCTCCCCTCACCGCTCCCCTTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp GTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: VSSDPLQSFLHQIPQKGWGQTAT*AVVSSF
Trigger: AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCC...CCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp ACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCCCTGGACAGAATGAAGAATaGGGAAATCATGGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: TAVLPASDTTERLGPLPPGQNEE*GNHGRS
Trigger: AGAACGGCCATGATTTCCCAATTCTTCATTCTGTCC...AGGGGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp TCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCCCGGACAGAATGAAGAATaGGGAAATCATGGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: STAVLPASDTTERLGPLPGQNEE*GNHGRS
Trigger: AGAACGGCCATGATTTCCCAATTCTTCATTCTGTCC...GGGCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359593.9
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GGTCACATCGCAACTTTAGATAAACCTGGAGCCGGCCTGAGCCTCGGTCCCACTGGACAGAATGAAGAATaGGGAAATCATGGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: GHIATLDKPGAGLSLGPTGQNEE*GNHGRS
Trigger: AGAACGGCCATGATTTCCCAATTCTTCATTCTGTCC...AGTGGGACCGAGGCTCAGGCCGGCTCCAGGTTTATCTAAAGTTGCGATGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp TTCCCCTTACAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCAAAAACTTCATTCTTTaGGCTCTGGTCAGAGCGACT +
Preference number: 5 (lower is better)
Translates to: FPLQSWVDEKTPWTTRYGKNFIL*ALVRAT
Trigger: AGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTTT...GCCATAACGAGTCGTCCAGGGCGTCTTCTCGTCCACCCAGCTCTGTAAGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS-3UTR CAA 90 bp GGTCTTGGGACTGAGGACTCTTCCTGCCCAGATTCAGAGTCCGAAGGCCAGGAGAAAAACTTCATTCTTTaGGCTCTGGTCAGAGCGACT +
Preference number: 5 (lower is better)
Translates to: GLGTEDSSCPDSESEGQEKNFIL*ALVRAT
Trigger: AGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTTT...CTCCTGGCCTTCGGACTCTGAATCTGGGCAGGAAGAGTCCTCAGTCCCAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp AAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCAGAAAGGCTGGGCCCATaGCCCCCTCCTGGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: KVWFVSSDPLQSFLHQIPERLGP*PPPGLG
Trigger: CCCAAGACCAGGAGGGGGCAATGGGCCCAGCCTTTC...TGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp TCCGAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGATAGTTCAGCATAATTaGGCCTTCAACAGGGGCACT +
Preference number: 5 (lower is better)
Translates to: SEGQEAGKETTVLPWDKLIVQHN*AFNRGT
Trigger: AGTGCCCCTGTTGAAGGCCAAATTATGCTGAACTAT...CAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp CATAACCTCTCAGCTCTGACTTCCCCACACAAAACTCTTCCGTCAAGCCAATGCATGAGCGGGTCCCCCTaGGAGGACAGAATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: HNLSALTSPHKTLPSSQCMSGSP*EDRMKN
Trigger: ATTCTTCATTCTGTCCTCCAAGGGGGACCCGCTCAT...GCATTGGCTTGACGGAAGAGTTTTGTGTGGGGAAGTCAGAGCTGAGAGGTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445208.5
CDS-3UTR CAA 90 bp AAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCACCTTGGCCGTCGTGTCCAAAAACTTCATTCTTTaGGCTCTGGTCAGAGCGACT +
Preference number: 5 (lower is better)
Translates to: KRNDCPPVGQTATLAVVSKNFIL*ALVRAT
Trigger: AGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTTT...GGACACGACGGCCAAGGTGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp GAAGGCCAGGAGGCTGGAAAAGAAACGACTGTCCTCCCGTGGGACAAACTGCCAAAAAACTTCATTCTTTaGGCTCTGGTCAGAGCGACT +
Preference number: 5 (lower is better)
Translates to: EGQEAGKETTVLPWDKLPKNFIL*ALVRAT
Trigger: AGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTTT...TGGCAGTTTGTCCCACGGGAGGACAGTCGTTTCTTTTCCAGCCTCCTGGCCTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
CDS-3UTR CAA 90 bp ACAAGGTCTCCAGCCATAGCTGTCTACAGGGTGAACTACAGGAACAACTTGTTCCTAGGAAGGAAGCTCTaGAGCCGAATCTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: TRSPAIAVYRVNYRNNLFLGRKL*SRISPC
Trigger: GCAGGGAGAGATTCGGCTCAAGAGCTTCCTTCCTAG...GAACAAGTTGTTCCTGTAGTTCACCCTGTAGACAGCTATGGCTGGAGACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359593.9
CDS-3UTR CAA 90 bp CAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGAACTACAGGAACAACTaGTTCAGGCAGGGAGCGAGT +
Preference number: 5 (lower is better)
Translates to: QVYCNVIVLQRPIHPAGMNYRNN*FRQGAS
Trigger: ACTCGCTCCCTGCCTGAACAAGTTGTTCCTGTAGTT...CATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTACAATAAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp GATCCACTGCAGTCCTTCCTGCATCAGATACCACAGAAAGGCTGGGCCCATTGCATAGTTCAGCATAATTaGGCCTTCAACAGGGGCACT +
Preference number: 5 (lower is better)
Translates to: DPLQSFLHQIPQKGWAHCIVQHN*AFNRGT
Trigger: AGTGCCCCTGTTGAAGGCCAAATTATGCTGAACTAT...GCAATGGGCCCAGCCTTTCTGTGGTATCTGATGCAGGAAGGACTGCAGTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp AAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATACCATATACCAGAGCCACATaGCGGGAGATGGTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: KVWFVSSDPLQSFLHQIPYTRAT*REMVPS
Trigger: CGAGGGGACCATCTCCCGCAATGTGGCTCTGGTATA...TGGTATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
CDS-3UTR CAA 90 bp CGCCCTGAGGTGGTTGCAAGCGGAGGATTCGATGAGACTCAAATTCGTCCAGATAAAAACTTCATTCTTTaGGCTCTGGTCAGAGCGACT +
Preference number: 5 (lower is better)
Translates to: RPEVVASGGFDETQIRPDKNFIL*ALVRAT
Trigger: AGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTTT...ATCTGGACGAATTTGAGTCTCATCGAATCCTCCGCTTGCAACCACCTCAGGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416938.5
ENST00000445208.5
ENST00000446007.5
CDS-3UTR CAA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGTGCCCCCTCCTGGTCTaGGGACTGAGGACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQCPLLV*GLRTLP
Trigger: AGGAAGAGTCCTCAGTCCCAAGACCAGGAGGGGGCA...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp CAAGTTTATTGTAATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTATGAAAAACTTCATTCTTTaGGCTCTGGTCAGAGCGACT +
Preference number: 5 (lower is better)
Translates to: QVYCNVIVLQRPIHPAGMKNFIL*ALVRAT
Trigger: AGTCGCTCTGACCAGAGCCAAAAGAATGAAGTTTTT...CATACCTGCTGGGTGGATGGGGCGCTGGAGGACGATGACATTACAATAAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359593.9
ENST00000416938.5
CDS-3UTR CAA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGGGACAAACTGCCACCTaGGCCGTCGTGTCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQGQTAT*AVVSSF
Trigger: AAACGAGGACACGACGGCCAAGGTGGCAGTTTGTCC...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp AGAATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGAGGTGCAGCCTGACATaGAGGGCTTGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: RIKVWFVSSDPLQSFLHQRCSLT*RAWLFE
Trigger: CTCAAAGAGCCAAGCCCTCAATGTCAGGCTGCACCT...CTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS-3UTR CAA 90 bp ATAAAAGTTTGGTTTGTAAGTTCTGATCCACTGCAGTCCTTCCTGCATCAGATAGAGGTCATCGGAGAGTaGGTACCGCATCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: IKVWFVSSDPLQSFLHQIEVIGE*VPHHSQ
Trigger: CTGACTGTGATGCGGTACCAACTCTCCGATGACCTC...TATCTGATGCAGGAAGGACTGCAGTGGATCAGAACTTACAAACCAAACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000422582.5
ENST00000429084.5
ENST00000445208.5
ENST00000445295.1
CDS TCA 72 bp CACTGTCCCCGCGGACTGGCGGGTGGAAGGACTCAGTaGAGGATCCTGCGACACAGGCTGGCCCTGGGCGCC +
Preference number: 6 (lower is better)
Translates to: HCPRGLAGGRTQ*RILRHRLALGA
Trigger: GGCGCCCAGGGCCAGCCTGTGTCGCAGGATCCTTCACTGAGTCCTTCCACCCGCCAGTCCGCGGGGACAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463195.5
CDS TCA 72 bp CCCCGCTCCTCACCCGCCTCCCGCCACTGGTTACCATaGCAACCGGGGACTCGTCTCCTGGCAGTCCCGTCA +
Preference number: 6 (lower is better)
Translates to: PRSSPASRHWLP*QPGTRLLAVPS
Trigger: TGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGGTAACCAGTGGCGGGAGGCGGGTGAGGAGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478501.5
CDS CCA 72 bp GTGGAATCTACCAATGAACCAGTCCTGGGAGGGAGCTaGCGCCCACCCGGCCCGACGGGACCCCGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: VESTNEPVLGGS*RPPGPTGPRSS
Trigger: TGAGGAGCGGGGTCCCGTCGGGCCGGGTGGGCGCCAGCTCCCTCCCAGGACTGGTTCATTGGTAGATTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478501.5
CDS CCA 72 bp GCCCTGCGGCCCCGGAACAAAAGAACGCGTGTGCGCTaGCCCTTTAAGAGCGATTCTCCTCCGCCCGCGCCA +
Preference number: 6 (lower is better)
Translates to: ALRPRNKRTRVR*PFKSDSPPPAP
Trigger: TGGCGCGGGCGGAGGAGAATCGCTCTTAAAGGGCCAGCGCACACGCGTTCTTTTGTTCCGGGGCCGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394061.7
ENST00000429084.5
ENST00000438383.5
ENST00000439416.5
ENST00000445208.5
CDS CCA 72 bp ACATCCCGGCCGCCACTGTCCCCGCGGACTGGCGGGTaGAAGGACTCAGTGAAGGATCCTGCGACACAGGCT +
Preference number: 6 (lower is better)
Translates to: TSRPPLSPRTGG*KDSVKDPATQA
Trigger: AGCCTGTGTCGCAGGATCCTTCACTGAGTCCTTCCACCCGCCAGTCCGCGGGGACAGTGGCGGCCGGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463195.5
CDS TCA 72 bp GGCCATGGTGATGCCGCCTCCCGCCACTGGTTACCATaGCAACCGGGGACTCGTCTCCTGGCAGTCCCGTCA +
Preference number: 6 (lower is better)
Translates to: GHGDAASRHWLP*QPGTRLLAVPS
Trigger: TGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGGTAACCAGTGGCGGGAGGCGGCATCACCATGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429084.5
ENST00000463195.5
CDS CCA 72 bp CACCACGCCCAGCATGACAACCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCGGC +
Preference number: 6 (lower is better)
Translates to: HHAQHDNRGLVS*QSRQLPVEELG
Trigger: GCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGCTGGGCGTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394061.7
CDS CAA 90 bp GCGTCGCTGTGGCTTAGGTGTCGCACCCACTTGTGGGGGTTGGCATaGCCGCATGGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAAA +
Preference number: 6 (lower is better)
Translates to: ASLWLRCRTHLWGLA*PHGLKASLRNRTWK
Trigger: TTTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCACAGCGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445295.1
CDS CCA 72 bp GCCATGGTGATGCATGACAACCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCGGC +
Preference number: 6 (lower is better)
Translates to: AMVMHDNRGLVS*QSRQLPVEELG
Trigger: GCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGCATCACCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359593.9
ENST00000416938.5
ENST00000421755.5
ENST00000439416.5
ENST00000445208.5
ENST00000446007.5
CDS CCA 72 bp GCCACTGGTTACCATGACAACCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCGGC +
Preference number: 6 (lower is better)
Translates to: ATGYHDNRGLVS*QSRQLPVEELG
Trigger: GCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGGTAACCAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429084.5
ENST00000463195.5
ENST00000478501.5
CDS CCA 72 bp GTGTCGCACCCACTTGTGGGGGTTGGCATTGCCGCATaGCCTGAAGGCCAGCCTGAGGAATCGGACCTGGAA +
Preference number: 6 (lower is better)
Translates to: VSHPLVGVGIAA*PEGQPEESDLE
Trigger: TTCCAGGTCCGATTCCTCAGGCTGGCCTTCAGGCCATGCGGCAATGCCAACCCCCACAAGTGGGTGCGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445295.1
CDS CCA 72 bp CGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTTaGCTACAGAGGAGACGGGAACAAAGTCAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: RGRGRCSLTLRA*LQRRREQSQPQ
Trigger: CTGGGGCTGACTTTGTTCCCGTCTCCTCTGTAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489387.1
CDS TCA 72 bp AGCCTGAGGAATCGGACCTGGAAAAGGCCTGAGAGTTaGGAGCCTCCTTGCACCCGAGGCAGGTCCCAGCGA +
Preference number: 6 (lower is better)
Translates to: SLRNRTWKRPES*EPPCTRGRSQR
Trigger: TCGCTGGGACCTGCCTCGGGTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGGTCCGATTCCTCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445295.1
CDS GCA 72 bp AGGCTGGCAGCTGCATCTGAAGGGAGAAGCAGCAGGTaGCCTGGCCCTGTCTTCCGTCCCATAGAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: RLAAASEGRSSR*PGPVFRPIELN
Trigger: GTTCAGCTCTATGGGACGGAAGACAGGGCCAGGGCACCTGCTGCTTCTCCCTTCAGATGCAGCTGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489387.1
CDS CAA 72 bp TCGAGGCAGGGGGAGGTGCAGCCTGACATTGAGGGCTaGGCTACAGAGGAGACGGGAACAAAGTCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: SRQGEVQPDIEG*ATEETGTKSAP
Trigger: TGGGGCTGACTTTGTTCCCGTCTCCTCTGTAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489387.1
CDS CAA 72 bp ACCACCCCTCGAGGCAGGGGGAGGTGCAGCCTGACATaGAGGGCTTGGCTACAGAGGAGACGGGAACAAAGT +
Preference number: 6 (lower is better)
Translates to: TTPRGRGRCSLT*RAWLQRRREQS
Trigger: ACTTTGTTCCCGTCTCCTCTGTAGCCAAGCCCTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489387.1
CDS CCA 72 bp ATAGCCATAGTCCATGACAACCGGGGACTCGTCTCCTaGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCGGC +
Preference number: 6 (lower is better)
Translates to: IAIVHDNRGLVS*QSRQLPVEELG
Trigger: GCCGAGCTCTTCTACCGGAAGCTGACGGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGGACTATGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438383.5
CDS CCA 72 bp CGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTaGCTGAGCTGGGACACGATGTTAGGCCTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: RPGRLVMAPSQA*LSWDTMLGLWK
Trigger: TTTCCAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCGTCCAGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450807.5
CDS CCA 72 bp CACGATGTTAGGCCTCTTGGCCGTCGTGTCCTCGTTTaGGGAGCCTCAGATCCGAATGACATAGGCGTCGCT +
Preference number: 6 (lower is better)
Translates to: HDVRPLGRRVLV*GASDPNDIGVA
Trigger: AGCGACGCCTATGTCATTCGGATCTGAGGCTCCCCAAACGAGGACACGACGGCCAAGAGGCCTAACATCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421755.5
CDS CCA 72 bp CGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTaGGACACGATGTTAGGCCTCTGGAAAAGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: RLVMAPSQAWLS*DTMLGLWKRPE
Trigger: CTCAGGCCTTTTCCAGAGGCCTAACATCGTGTCCCAGCTCAGCCAAGCCTGCGATGGAGCCATAACGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450807.5
CDS GCA 72 bp GAGTGCGGTGTCCGGATCTCGGCTCACTGCAACCTCTaGCTCTTGGATTCAAGCGATTCTCAAGCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: ECGVRISAHCNL*LLDSSDSQASA
Trigger: AGCTGAGGCTTGAGAATCGCTTGAATCCAAGAGGCAGAGGTTGCAGTGAGCCGAGATCCGGACACCGCACTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394061.7
ENST00000422582.5
ENST00000478501.5
ENST00000495154.1
CDS TCA 72 bp TTCCCAAATTCTACAGCCTCTACCTTAACTGGCTTCTaGGGCTGGCAGCTGCATCTGAAGGGAGAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: FPNSTASTLTGF*GWQLHLKGEAA
Trigger: TGCTGCTTCTCCCTTCAGATGCAGCTGCCAGCCTCAGAAGCCAGTTAAGGTAGAGGCTGTAGAATTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489387.1