RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP4E1 (Homo sapiens)

Ensembl gene IDs: ENSG00000081014

Ensembl transcript IDs: ENST00000261842.10, ENST00000558439.5, ENST00000560508.1, ENST00000561393.5, ENST00000561441.5

Found 463 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTATGCCAAGCATGTCTCTCACGACAACTGCAGCTACCACTCATaGATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTC +
Preference number: 1 (lower is better)
Translates to: LYAKHVSHDNCSYHS*IHPVTKQQISLVAV
Trigger: GACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAGCTGCAGTTGTCGTGAGAGACATGCTTGGCATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR GCA 90 bp GGTATACTTGGCACATTAGCAGTTGGTAACTGCTCAGCTTCCATCTaGAGTTTCTCTAGCAGGACCCTTACTCAGGCCCACTTTCAAACC +
Preference number: 1 (lower is better)
Translates to: GILGTLAVGNCSASI*SFSSRTLTQAHFQT
Trigger: GGTTTGAAAGTGGGCCTGAGTAAGGGTCCTGCTAGAGAAACTGCAGATGGAAGCTGAGCAGTTACCAACTGCTAATGTGCCAAGTATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR TCA 90 bp ATTTGTCTCTTTCAGTCCTGTCTCAGCACTATTCCCAGATACATCTaGACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCC +
Preference number: 1 (lower is better)
Translates to: ICLFQSCLSTIPRYI*TKRNASRRLSSSEA
Trigger: GGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATCTGGGAATAGTGCTGAGACAGGACTGAAAGAGACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR GCA 90 bp ACACATGCTGTGCTTGGTATACTTGGCACATTAGCAGTTGGTAACTaGTCAGCTTCCATCTGCAGTTTCTCTAGCAGGACCCTTACTCAG +
Preference number: 1 (lower is better)
Translates to: THAVLGILGTLAVGN*SASICSFSSRTLTQ
Trigger: CTGAGTAAGGGTCCTGCTAGAGAAACTGCAGATGGAAGCTGAGCAGTTACCAACTGCTAATGTGCCAAGTATACCAAGCACAGCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR GCA 90 bp CTAAATCTACCATTACATGTCTCCCACCCATTAGACAGCTCTGTATaGCAAGCATGTCTCTCACGACAACTGCAGCTACCACTCATGAAT +
Preference number: 1 (lower is better)
Translates to: LNLPLHVSHPLDSSV*QACLSRQLQLPLMN
Trigger: ATTCATGAGTGGTAGCTGCAGTTGTCGTGAGAGACATGCTTGGCATACAGAGCTGTCTAATGGGTGGGAGACATGTAATGGTAGATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR GCA 90 bp TACTCTCTTGAGGAACAGGCAGAGCTCCACTTTCATCACCAGTTTTaGTTTCCTTCTTGGGAAGATAGCCTTCTTTCCCCCACAATTTCT +
Preference number: 1 (lower is better)
Translates to: YSLEEQAELHFHHQF*FPSWEDSLLSPTIS
Trigger: AGAAATTGTGGGGGAAAGAAGGCTATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAGTGGAGCTCTGCCTGTTCCTCAAGAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR GCA 90 bp GAGCCTGGGGATGAATCTGATCTATTCAAAAGGAGGAACCTATTATaGAAGAAATTCCAGTCACTTATGACTCTTGTAGCAAGGCTTCAC +
Preference number: 1 (lower is better)
Translates to: EPGDESDLFKRRNLL*KKFQSLMTLVARLH
Trigger: GTGAAGCCTTGCTACAAGAGTCATAAGTGACTGGAATTTCTTGCATAATAGGTTCCTCCTTTTGAATAGATCAGATTCATCCCCAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR GCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTaGTTCCATTACAGGCAAACAGCATCCAGGTTGCTCAGTCACCTT +
Preference number: 1 (lower is better)
Translates to: RFFYLHTILKAFGAF*FHYRQTASRLLSHL
Trigger: AAGGTGACTGAGCAACCTGGATGCTGTTTGCCTGTAATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR CCA 90 bp CTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTaGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAG +
Preference number: 1 (lower is better)
Translates to: LFHHQNLPLVVSESY*EYQDALHLLLLKTQ
Trigger: CTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
3UTR TCA 90 bp GTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCTaGGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTT +
Preference number: 1 (lower is better)
Translates to: VNSWINLSTVLEECA*DVNLVTAAINQAFV
Trigger: AACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR TCA 90 bp GAAGAAATCTCTGTGGATAGAACACATTTTCCATATCCAGTAAAGTaGGATAAGACTGAACTGCATAGAGTCTTAATTGCTGATCTTCTG +
Preference number: 1 (lower is better)
Translates to: EEISVDRTHFPYPVK*DKTELHRVLIADLL
Trigger: CAGAAGATCAGCAATTAAGACTCTATGCAGTTCAGTCTTATCTCACTTTACTGGATATGGAAAATGTGTTCTATCCACAGAGATTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR TCA 90 bp TCCATAGCTCTTACCCCAGATGTTGTCCCTTCACTGACTAAATTATaGCTATTAGGTAAAGAGAATGAATCTACCCACAAAAATAATTTG +
Preference number: 1 (lower is better)
Translates to: SIALTPDVVPSLTKL*LLGKENESTHKNNL
Trigger: CAAATTATTTTTGTGGGTAGATTCATTCTCTTTACCTAATAGTCATAATTTAGTCAGTGAAGGGACAACATCTGGGGTAAGAGCTATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR TCA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATATTGTCATCTGGTGTTaGAGAGCCAGAGTAGGATCC +
Preference number: 2 (lower is better)
Translates to: NAVSRGWMGAADRPIALHIVIWC*RARVGS
Trigger: GGATCCTACTCTGGCTCTTCAACACCAGATGACAAT...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGCTTTCCTTGGCAACTaGGGCTGCAGTAGATTGAGG +
Preference number: 2 (lower is better)
Translates to: LDGVKFSRASARIPPSPFAFLGN*GCSRLR
Trigger: CCTCAATCTACTGCAGCCTCAGTTGCCAAGGAAAGC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATGAAGGAAGTGCAGCTTaGGATTCTGACATTTTTACA +
Preference number: 2 (lower is better)
Translates to: NAVSRGWMGAADRPIALHEGSAA*DSDIFT
Trigger: TGTAAAAATGTCAGAATCTCAAGCTGCACTTCCTTC...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATATCTGCACACTATATTaGAAGCTTTTGGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: NAVSRGWMGAADRPIALHICTLY*KLLVLS
Trigger: AGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGAT...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp GATCTACATTCTCCATTATACTCTCTTGAGGAACAGGCAGAGCTCCACTTTCATGAGACTGTCGTCCAGTaGAGCCAGATGAAGAAAAGG +
Preference number: 2 (lower is better)
Translates to: DLHSPLYSLEEQAELHFHETVVQ*SQMKKR
Trigger: CCTTTTCTTCATCTGGCTTCACTGGACGACAGTCTC...ATGAAAGTGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTTTAGAAGAGTGCGCCTaGGATGTCAATTTGGTCACA +
Preference number: 2 (lower is better)
Translates to: LDGVKFSRASARIPPSPFLEECA*DVNLVT
Trigger: TGTGACCAAATTGACATCTCAGGCGCACTCTTCTAA...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGCGCTGCACCCTGACTaGGTCCTTCAGCCACAAAAC +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKALHPD*VLQPQN
Trigger: GTTTTGTGGCTGAAGGACTCAGTCAGGGTGCAGCGC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGCTAATACATCTGCATaGACTCGGCAATGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: LDGVKFSRASARIPPSPFANTSA*TRQCSK
Trigger: CTTACTGCATTGCCGAGTTCATGCAGATGTATTAGC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCAGGTTTGTAAGGCGCTaGACCCTGACTGAGTCCTTC +
Preference number: 2 (lower is better)
Translates to: LNILYNPELKVRDTVLGIRFVRR*TLTESF
Trigger: GAAGGACTCAGTCAGGGTGCAGCGCCTTACAAACCT...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAACTGAACCAAGAGAAATaGCAGCAGGAGACTGTCGTC +
Preference number: 2 (lower is better)
Translates to: RLQYENFSTKGSSVSDSELNQEK*QQETVV
Trigger: GACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAG...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAATCCATTATACTCTCTTaGGGAACAGGCAGAGCTCCA +
Preference number: 2 (lower is better)
Translates to: RLQYENFSTKGSSVSDSESIILS*GTGRAP
Trigger: TGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGA...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGGAGCACCTCCTTTGTaGCATGCTGCATTCCTTTGC +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKGAPPL*HAAFLC
Trigger: GCAAAGGAATGCAGCATGTCACAAAGGAGGTGCTCC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR TCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCATTGTCATCTGGTGTTaGAGAGCCAGAGTAGGATCC +
Preference number: 2 (lower is better)
Translates to: LNILYNPELKVRDTVLGIIVIWC*RARVGS
Trigger: GGATCCTACTCTGGCTCTTCAACACCAGATGACAAT...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAATCCAGTGAAGCCAGATaGAGAAAAGGAGAGTCCATA +
Preference number: 2 (lower is better)
Translates to: RLQYENFSTKGSSVSDSESSEAR*RKGESI
Trigger: TATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGA...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACTCAGAATTCCTGACCTaGGTGATTAACAGTACCAAT +
Preference number: 2 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDSEFLT*VINSTN
Trigger: ATTGGTACTGTTAATCACCCAGGTCAGGAATTCTGA...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR TCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCATTCCCAGATACATCTaGACCAAGAGAAATGCCAGC +
Preference number: 2 (lower is better)
Translates to: LNILYNPELKVRDTVLGIIPRYI*TKRNAS
Trigger: GCTGGCATTTCTCTTGGTTCAGATGTATCTGGGAAT...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTATTCCCAGATACATCTaGACCAAGAGAAATGCCAGC +
Preference number: 2 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGIPRYI*TKRNAS
Trigger: GCTGGCATTTCTCTTGGTTCAGATGTATCTGGGAAT...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTGTGAGAGACAGTATCTaGTTTTCCCAGCAGGTTGAT +
Preference number: 2 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGVRDSI*FSQQVD
Trigger: ATCAACCTGCTGGGAAAAGCAGATACTGTCTCTCAC...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAATTAGGGATACAGTTTTaGGGATCTTTCTTGACCAGG +
Preference number: 2 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKLGIQF*GSFLTR
Trigger: CCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAA...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CCA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCTTAGGGATACAGTTTTaGGGATCTTTCTTGACCAGG +
Preference number: 2 (lower is better)
Translates to: GISGCITSPPTENTAFIVLGIQF*GSFLTR
Trigger: CCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAA...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CCA 90 bp AGTGCGCCTGAGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTTTATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT +
Preference number: 2 (lower is better)
Translates to: SAPEMSIWSQQQLTRLLFIFQCT*QPSQVI
Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...AAACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAAGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA +
Preference number: 2 (lower is better)
Translates to: RLQYENFSTKGSSVSDSEEQIFQ*TWQPSQ
Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGACACCATGTTCCTTTaGGCAGACCCAAAATCATGC +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKDTMFL*ADPKSC
Trigger: GCATGATTTTGGGTCTGCCCAAAGGAACATGGTGTC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACCCTCAATATCCAGCATaGTCATGGATCTCCTACAAC +
Preference number: 2 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNPQYPA*SWISYN
Trigger: GTTGTAGGAGATCCATGAGCATGCTGGATATTGAGG...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAATTAGACAGCTCTGTATaGCAAGCATGTCTCTCACGA +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKLDSSV*QACLSR
Trigger: TCGTGAGAGACATGCTTGGCATACAGAGCTGTCTAA...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTCACATCTCCTGCAATaGAAAAATAAAGGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: LNILYNPELKVRDTVLGISHLLQ*KNKGWW
Trigger: CCACCAACCTTTATTTTTGCATTGCAGGAGATGTGA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR GCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA +
Preference number: 2 (lower is better)
Translates to: LKVRDTVLGIFLDQESQREQIFQ*TWQPSQ
Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATTTAGGGATACAGTTTTaGGGATCTTTCTTGACCAGG +
Preference number: 2 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHLGIQF*GSFLTR
Trigger: CCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAA...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATCCTGAGATGTCAATTTaGTCACAGCAGCAATTAACC +
Preference number: 2 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHPEMSI*SQQQLT
Trigger: GGTTAATTGCTGCTGTGACCAAATTGACATCTCAGG...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATCCATATCCAGTAAAGTaGGATAAGACTGAACTGCAT +
Preference number: 2 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHPYPVK*DKTELH
Trigger: ATGCAGTTCAGTCTTATCTCACTTTACTGGATATGG...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATTTCCTTCTGAACTTGTaGGAGACAGTATCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHFLLNL*ETVSAF
Trigger: AAAAGCAGATACTGTCTCTCACAAGTTCAGAAGGAA...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCGTTATTAGCAAACAATaGAGGTGTAGACAGACTACA +
Preference number: 2 (lower is better)
Translates to: LNILYNPELKVRDTVLGIVISKQ*RCRQTT
Trigger: TGTAGTCTGTCTACACCTTCATTGTTTGCTAATAAC...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTGACTTCCATAGCATTTaGGTGTATGTATTCAGTAGT +
Preference number: 2 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGDFHSI*VYVFSS
Trigger: ACTACTGAATACATACACTCAAATGCTATGGAAGTC...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTATCTGCACACTATATTaGAAGCTTTTGGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGICTLY*KLLVLS
Trigger: AGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGAT...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTTTTCATCACCAGTTTTaGTTTCCTTCTTGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGFHHQF*FPSWED
Trigger: ATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAA...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAATGTCTGAATAAACCATaGATTATCAGGAGCATATGT +
Preference number: 2 (lower is better)
Translates to: RLQYENFSTKGSSVSDSECLNKP*IIRSIC
Trigger: ACATATGCTCCTGATAATGCATGGTTTATTCAGACA...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558439.5
3UTR CAA 90 bp TTTAGATTGGGTAAGAACTTGAGATTGATCCTTTTTAGTTATAGCTaGATCTACATTCTCCATTATACTCTCTTGAGGAACAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: FRLGKNLRLILFSYS*IYILHYTLLRNRQS
Trigger: GCTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAGATCAAGCTATAACTAAAAAGGATCAATCTCAAGTTCTTACCCAATCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGTTGCTCAGTCACCTTaGAATTTTCTGCAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKVAQSP*NFLQEK
Trigger: TTTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAAC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCTTGGGAATATCAGGATaGATTACATCTCCTCCTACT +
Preference number: 2 (lower is better)
Translates to: KDMVNSWINLSTVLEECALGISG*ITSPPT
Trigger: AGTAGGAGGAGATGTAATGCATCCTGATATTCCCAA...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAAAACAGCATCCAGGTTaGTCAGTCACCTTGAAATTT +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKKQHPG*SVTLKF
Trigger: AAATTTCAAGGTGACTGAGCAACCTGGATGCTGTTT...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR CAA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTaGGGGATCTTTCTTGACCAGGAATCACAAAGAAAACATATAAAC +
Preference number: 2 (lower is better)
Translates to: LNILYNPELKVRDTV*GIFLDQESQRKHIN
Trigger: GTTTATATGTTTTCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
3UTR-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGTTATTAGCAAACAATaGAGGTGTAGACAGACTACA +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKVISKQ*RCRQTT
Trigger: TGTAGTCTGTCTACACCTTCATTGTTTGCTAATAAC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CCA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT +
Preference number: 2 (lower is better)
Translates to: KDMVNSWINLSTVLEECAIFQCT*QPSQVI
Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAATACAGTCACATCTCCTaGAATGCAAAAATAAAGGTT +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKYSHIS*NAKIKV
Trigger: AACCTTTATTTTTGCATTGCAGGAGATGTGACTGTA...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAATGCAAAAATAAAGGTTaGTGGACACCTGATTTACAA +
Preference number: 2 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKCKNKG*WTPDLQ
Trigger: TTGTAAATCAGGTGTCCACCAACCTTTATTTTTGCA...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR GCA 72 bp TTCCTCCTGGCGTTGATGGGGAGGTTTGTAAGGCGCTaGACCCTGACTGAGTCCTTCAGCCACAAAACCATC +
Preference number: 3 (lower is better)
Translates to: FLLALMGRFVRR*TLTESFSHKTI
Trigger: GATGGTTTTGTGGCTGAAGGACTCAGTCAGGGTGCAGCGCCTTACAAACCTCCCCATCAACGCCAGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR CCA 72 bp CATCTGCATGAACTCGGCAATGCAGTAAGCAGGGGATaGATGGGAGCAGCTGACAGGCCAATAGCCCTTCAT +
Preference number: 3 (lower is better)
Translates to: HLHELGNAVSRG*MGAADRPIALH
Trigger: ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATTGCCGAGTTCATGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR TCA 72 bp CAGGAGGATCTGAACCACAGGGCTAATACATCTGCATaGACTCGGCAATGCAGTAAGCAGGGGATGGATGGG +
Preference number: 3 (lower is better)
Translates to: QEDLNHRANTSA*TRQCSKQGMDG
Trigger: CCCATCCATCCCCTGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAGCCCTGTGGTTCAGATCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATGCTTTTCCCAGCAGGTaGATTGTACTTTCTGATCCT +
Preference number: 3 (lower is better)
Translates to: NAVSRGWMGAADRPIALHAFPSR*IVLSDP
Trigger: AGGATCAGAAAGTACAATCAACCTGCTGGGAAAAGC...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp CTAATACATCTGCATGAACTCGGCAATGCAGTAAGCAGGGGATGGATGGGAGCAGCTAAAGAGCTTTCCTaGGCAACTGAGGCTGCAGTA +
Preference number: 3 (lower is better)
Translates to: LIHLHELGNAVSRGWMGAAKELS*ATEAAV
Trigger: TACTGCAGCCTCAGTTGCCAAGGAAAGCTCTTTAGC...TGCTCCCATCCATCCCCTGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR GCA 72 bp CCATTACATGTCTCCCACCCATTAGACAGCTCTGTATaGCAAGCATGTCTCTCACGACAACTGCAGCTACCA +
Preference number: 3 (lower is better)
Translates to: PLHVSHPLDSSV*QACLSRQLQLP
Trigger: TGGTAGCTGCAGTTGTCGTGAGAGACATGCTTGGCATACAGAGCTGTCTAATGGGTGGGAGACATGTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR GCA 72 bp GAGGAACAGGCAGAGCTCCACTTTCATCACCAGTTTTaGTTTCCTTCTTGGGAAGATAGCCTTCTTTCCCCC +
Preference number: 3 (lower is better)
Translates to: EEQAELHFHHQF*FPSWEDSLLSP
Trigger: GGGGGAAAGAAGGCTATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAGTGGAGCTCTGCCTGTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATCTTTCATCACCAGTTTaGCTTTCCTTCTTGGGAAGA +
Preference number: 3 (lower is better)
Translates to: NAVSRGWMGAADRPIALHLSSPV*LSFLGR
Trigger: TCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAG...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR TCA 72 bp AAGCATGTCTCTCACGACAACTGCAGCTACCACTCATaGATACACCCTGTAACCAAGCAACAGATCTCCCTG +
Preference number: 3 (lower is better)
Translates to: KHVSHDNCSYHS*IHPVTKQQISL
Trigger: CAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAGCTGCAGTTGTCGTGAGAGACATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR GCA 72 bp GTAGCTGTCCATGTGCTCTCAGCATCTTACACCTATTaGTTCACACTCGACCTAGCCTCAGTAACTAGGCAA +
Preference number: 3 (lower is better)
Translates to: VAVHVLSASYTY*FTLDLASVTRQ
Trigger: TTGCCTAGTTACTGAGGCTAGGTCGAGTGTGAAGCAATAGGTGTAAGATGCTGAGAGCACATGGACAGCTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR GCA 72 bp GTGCTTGGTATACTTGGCACATTAGCAGTTGGTAACTaGTCAGCTTCCATCTGCAGTTTCTCTAGCAGGACC +
Preference number: 3 (lower is better)
Translates to: VLGILGTLAVGN*SASICSFSSRT
Trigger: GGTCCTGCTAGAGAAACTGCAGATGGAAGCTGAGCAGTTACCAACTGCTAATGTGCCAAGTATACCAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTG +
Preference number: 3 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTASLGHF*RDLNIL
Trigger: CAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCT...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp CTAATACATCTGCATGAACTCGGCAATGCAGTAAGCAGGGGATGGATGGGAGCAAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTG +
Preference number: 3 (lower is better)
Translates to: LIHLHELGNAVSRGWMGASLGHF*RDLNIL
Trigger: CAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCT...TGCTCCCATCCATCCCCTGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp GATCTACATTCTCCATTATACTCTCTTGAGGAACAGGCAGAGCTCCACTTTCATCTTTTCCTCCTGGCGTaGATGGGGAGGTTTGTAAGG +
Preference number: 3 (lower is better)
Translates to: DLHSPLYSLEEQAELHFHLFLLA*MGRFVR
Trigger: CCTTACAAACCTCCCCATCAACGCCAGGAGGAAAAG...ATGAAAGTGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATTTTCTCCTCTTTAGATaGGGTAAGAACTTGAGATTG +
Preference number: 3 (lower is better)
Translates to: NAVSRGWMGAADRPIALHFLLFR*GKNLRL
Trigger: CAATCTCAAGTTCTTACCCAATCTAAAGAGGAGAAA...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR TCA 72 bp AACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTaGAGCCAGATGAAGAAAAGGAGAGTCCATATGGTT +
Preference number: 3 (lower is better)
Translates to: NQEKCQQETVVQ*SQMKKRRVHMV
Trigger: AACCATATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR GCA 72 bp CTGTCTTCCCTTATATTCCCCCAGATTCACACTTGCTaGCATCTCCATTTTCAGCAAAGATGCCTGGCACAA +
Preference number: 3 (lower is better)
Translates to: LSSLIFPQIHTC*HLHFQQRCLAQ
Trigger: TTGTGCCAGGCATCTTTGCTGAAAATGGAGATGGCAGCAAGTGTGAATCTGGGGGAATATAAGGGAAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACAGCATCTTACACCTATaGCTTCACACTCGACCTAGC +
Preference number: 3 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDSILHL*LHTRPS
Trigger: GCTAGGTCGAGTGTGAAGCAATAGGTGTAAGATGCT...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp CTAATACATCTGCATGAACTCGGCAATGCAGTAAGCAGGGGATGGATGGGAGCAATTTTGCCGACCAAATaGACGATGACATACTCTTCT +
Preference number: 3 (lower is better)
Translates to: LIHLHELGNAVSRGWMGAILPTK*TMTYSS
Trigger: AGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAAT...TGCTCCCATCCATCCCCTGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp CTAATACATCTGCATGAACTCGGCAATGCAGTAAGCAGGGGATGGATGGGAGCAAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT +
Preference number: 3 (lower is better)
Translates to: LIHLHELGNAVSRGWMGANFPMH*AAFSSN
Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...TGCTCCCATCCATCCCCTGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR TCA 72 bp AATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCAGATaGAGAAAAGGAGAGTCCATATGGTTCAAAATTGAG +
Preference number: 3 (lower is better)
Translates to: NASRRLSSSEAR*RKGESIWFKIE
Trigger: CTCAATTTTGAACCATATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGACGACAGTCTCCTGCTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR GCA 72 bp TTTCTGTCTTCCCTTATATTCCCCCAGATTCACACTTaGTGCCATCTCCATTTTCAGCAAAGATGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: FLSSLIFPQIHT*CHLHFQQRCLA
Trigger: TGCCAGGCATCTTTGCTGAAAATGGAGATGGCAGCAAGTGTGAATCTGGGGGAATATAAGGGAAGACAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTACCCCCAGATTCACACTaGCTGCCATCTCCATTTTCA +
Preference number: 3 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLPPDSH*LPSPFS
Trigger: TGAAAATGGAGATGGCAGCAAGTGTGAATCTGGGGG...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTG +
Preference number: 3 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDSLGHF*RDLNIL
Trigger: CAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCT...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp AGTGCGCCTGAGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTTTAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTG +
Preference number: 3 (lower is better)
Translates to: SAPEMSIWSQQQLTRLLFSLGHF*RDLNIL
Trigger: CAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCT...AAACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCGCCAGCTCTGCTATTTaGCCGACCAAATTGACGATG +
Preference number: 3 (lower is better)
Translates to: LNILYNPELKVRDTVLGIASSAI*PTKLTM
Trigger: CATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGC...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAAGCCAGCTCTGCTATTTaGCCGACCAAATTGACGATG +
Preference number: 3 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEASSAI*PTKLTM
Trigger: CATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGC...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
3UTR-3UTR CAA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT +
Preference number: 3 (lower is better)
Translates to: SQLCYFADQIDDDILFFANFPMH*AAFSSN
Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAACAGAGTAGGATCCTGTaGGATAACATAGGTAAGAGC +
Preference number: 3 (lower is better)
Translates to: RLQYENFSTKGSSVSDSEQSRIL*DNIGKS
Trigger: GCTCTTACCTATGTTATCCAACAGGATCCTACTCTG...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCTATTGTCATCTGGTGTaGAAGAGCCAGAGTAGGATC +
Preference number: 3 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSYCHLV*KSQSRI
Trigger: GATCCTACTCTGGCTCTTCAACACCAGATGACAATA...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACCCCCAGATTCACACTaGCTGCCATCTCCATTTTCA +
Preference number: 3 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKPPDSH*LPSPFS
Trigger: TGAAAATGGAGATGGCAGCAAGTGTGAATCTGGGGG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp AGTGCGCCTGAGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTTTTACCCAACTCATAACTaGAAGAAATCTCTGTGGATA +
Preference number: 3 (lower is better)
Translates to: SAPEMSIWSQQQLTRLLFYPTHN*KKSLWI
Trigger: TATCCACAGAGATTTCTTCAAGTTATGAGTTGGGTA...AAACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGCCAATAGCCCTTCATaGCCTATAATCTCAATAATA +
Preference number: 3 (lower is better)
Translates to: LDGVKFSRASARIPPSPFANSPS*PIISII
Trigger: TATTATTGAGATTATAGGCAATGAAGGGCTATTGGC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTATTTTGGGGATCTTTCTaGACCAGGAATCACAAAGAA +
Preference number: 3 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLFWGSF*TRNHKE
Trigger: TTCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAA...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp GATCTACATTCTCCATTATACTCTCTTGAGGAACAGGCAGAGCTCCACTTTCATTACCCAACTCATAACTaGAAGAAATCTCTGTGGATA +
Preference number: 3 (lower is better)
Translates to: DLHSPLYSLEEQAELHFHYPTHN*KKSLWI
Trigger: TATCCACAGAGATTTCTTCAAGTTATGAGTTGGGTA...ATGAAAGTGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCCAATTAACCAGGCTTTaGTTTCTGAAGACACAGAGT +
Preference number: 3 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSQLTRL*FLKTQS
Trigger: ACTCTGTGTCTTCAGAAACAAAAGCCTGGTTAATTG...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTTTTGGGGATCTTTCTaGACCAGGAATCACAAAGAA +
Preference number: 3 (lower is better)
Translates to: LNILYNPELKVRDTVLGIFWGSF*TRNHKE
Trigger: TTCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
3UTR-3UTR CAA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCGTTAGGGATACAGTTTaGGGGATCTTTCTTGACCAG +
Preference number: 3 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGVRDTV*GIFLDQ
Trigger: CTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAAC...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
3UTR-3UTR CAA 90 bp AGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCAGATTTTGCCGACCAAATaGACGATGACATACTCTTCT +
Preference number: 3 (lower is better)
Translates to: SIHCLNKPCIIRSIFLSQILPTK*TMTYSS
Trigger: AGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAAT...CTGGCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
3UTR-3UTR CAA 90 bp CACAGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCATTTTGCCGACCAAATaGACGATGACATACTCTTCT +
Preference number: 3 (lower is better)
Translates to: HSIHCLNKPCIIRSIFLSILPTK*TMTYSS
Trigger: AGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAAT...GCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
3UTR-3UTR CAA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACAGAGTAGGATCCTGTaGGATAACATAGGTAAGAGC +
Preference number: 3 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKQSRIL*DNIGKS
Trigger: GCTCTTACCTATGTTATCCAACAGGATCCTACTCTG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCTTTTGGGGATCTTTCTaGACCAGGAATCACAAAGAA +
Preference number: 3 (lower is better)
Translates to: KDMVNSWINLSTVLEECAFWGSF*TRNHKE
Trigger: TTCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAA...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
3UTR-3UTR CAA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAATTTTGGGGATCTTTCTaGACCAGGAATCACAAAGAA +
Preference number: 3 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKFWGSF*TRNHKE
Trigger: TTCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAA...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
3UTR-3UTR CAA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGCCAATAGCCCTTCATaGCCTATAATCTCAATAATA +
Preference number: 3 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKANSPS*PIISII
Trigger: TATTATTGAGATTATAGGCAATGAAGGGCTATTGGC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATGCGCTGCACCCTGACTaGGTCCTTCAGCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: NAVSRGWMGAADRPIALHALHPD*VLQPQN
Trigger: GTTTTGTGGCTGAAGGACTCAGTCAGGGTGCAGCGC...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACAGGAGAAGGACGCCTTaGCGGCCGCGGGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDRRRTP*RPRAHH
Trigger: GTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCT...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTGCAAGGAGGCAGCCATaGCCCCAACATCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAARRQP*PQHLCH
Trigger: GTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGC...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTGCGCTGCACCCTGACTaGGTCCTTCAGCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAALHPD*VLQPQN
Trigger: GTTTTGTGGCTGAAGGACTCAGTCAGGGTGCAGCGC...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTGCAGTAAGCAGGGGATaGATGGGAGCAGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAAVSRG*MGAADR
Trigger: CCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGC...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp AGTGCGCCTGAGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTTTTGCCGCGGACAAGGCTaGCCAGCCTCGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SAPEMSIWSQQQLTRLLFCRGQG*PASRRR
Trigger: CCTTCTCCTCGAGGCTGGGCAGCCTTGTCCGCGGCA...AAACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTTCAAACCCTGAGCTCTaGTCTGCCTGCCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCSNPEL*SACLHR
Trigger: CCTGTGGAGGCAGGCAGATCAGAGCTCAGGGTTTGA...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTCCACCGGGCTGGTTCTaGAGAAAGAGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFAPPGWF*RKSPGS
Trigger: GCTGCCGGGACTCTTTCTGCAGAACCAGCCCGGTGG...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACGGCCCACCACCGGGCTaGTTCTGCAGAAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDGPPPG*FCRKSP
Trigger: GGGACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCC...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCAAGGAGAAGGACGCCTTaGCGGCCGCGGGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSRRRTP*RPRAHH
Trigger: GTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCT...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp AGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCAGAGGAGAAGGACGCCTTaGCGGCCGCGGGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: SIHCLNKPCIIRSIFLSQRRRTP*RPRAHH
Trigger: GTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCT...CTGGCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATCCAAGGGCAGTTCTGTaGGTGACTCAGAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: NAVSRGWMGAADRPIALHPRAVL*VTQNPK
Trigger: TTTTGGATTCTGAGTCACTCACAGAACTGCCCTTGG...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCAGCTTTCCTTGGCAACTaGGGCTGCAGTAGATTGAGG +
Preference number: 4 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPAFLGN*GCSRLR
Trigger: CCTCAATCTACTGCAGCCTCAGTTGCCAAGGAAAGC...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATAGGAGAAGGACGCCTTaGCGGCCGCGGGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHRRRTP*RPRAHH
Trigger: GTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCT...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACGCAAGGAGGCAGCCATaGCCCCAACATCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDARRQP*PQHLCH
Trigger: GTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGC...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATGCACACTGTGGTAATTaGATTCTACTGGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: NAVSRGWMGAADRPIALHAHCGN*ILLGAF
Trigger: GAAAGCTCCCAGTAGAATTCAATTACCACAGTGTGC...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTATTGTCATCTGGTGTTaGAGAGCCAGAGTAGGATCC +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAIVIWC*RARVGS
Trigger: GGATCCTACTCTGGCTCTTCAACACCAGATGACAAT...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AGTGCGCCTGAGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTTTGCGCTGCACCCTGACTaGGTCCTTCAGCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: SAPEMSIWSQQQLTRLLFALHPD*VLQPQN
Trigger: GTTTTGTGGCTGAAGGACTCAGTCAGGGTGCAGCGC...AAACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTCCAAGGGCAGTTCTGTaGGTGACTCAGAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAPRAVL*VTQNPK
Trigger: TTTTGGATTCTGAGTCACTCACAGAACTGCCCTTGG...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTTGCAGCTACCACTCATaGATACACCCTGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTACSYHS*IHPVTK
Trigger: CTTGGTTACAGGGTGTATTCATGAGTGGTAGCTGCA...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAACCACCGGGCTGGTTCTaGAGAAAGAGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKPPGWF*RKSPGS
Trigger: GCTGCCGGGACTCTTTCTGCAGAACCAGCCCGGTGG...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATGCCGCGGACAAGGCTaGCCAGCCTCGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSCRGQG*PASRRR
Trigger: CCTTCTCCTCGAGGCTGGGCAGCCTTGTCCGCGGCA...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCGGCCCACCACCGGGCTaGTTCTGCAGAAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSGPPPG*FCRKSP
Trigger: GGGACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCC...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAGGCCCACCACCGGGCTaGTTCTGCAGAAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKGPPPG*FCRKSP
Trigger: GGGACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCC...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTCCACAGGGACTATTCTaGTACCCTTCTTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCPQGLF*YPSSSV
Trigger: GACGGAGGAAGAAGGGTACCAGAATAGTCCCTGTGG...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTTCAGTGCACTCTCAGTaGCTCACAATCATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTASVHSQ*LTIMRQ
Trigger: TTGCCTCATGATTGTGAGCCACTGAGAGTGCACTGA...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTGCACACTGTGGTAATTaGATTCTACTGGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAAHCGN*ILLGAF
Trigger: GAAAGCTCCCAGTAGAATTCAATTACCACAGTGTGC...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTTCCAGTGAAGCCAGATaGAGAAAAGGAGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTASSEAR*RKGESI
Trigger: TATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGA...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATCTTTTCCCAGCAGGTTaGTTGTACTTTCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: NAVSRGWMGAADRPIALHLFPAG*LYFLIL
Trigger: TAGGATCAGAAAGTACAATCAACCTGCTGGGAAAAG...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTATGGATGGGAGCAGCTaGCAGGCCAATAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFAMDGSS*QANSPS
Trigger: TGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCAT...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAACCACCGGGCTGGTTCTaGAGAAAGAGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEPPGWF*RKSPGS
Trigger: GCTGCCGGGACTCTTTCTGCAGAACCAGCCCGGTGG...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTTGCTCAGCTTCCATCTaGAGTTTCTCTAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCCSASI*SFSSRT
Trigger: GGTCCTGCTAGAGAAACTGCAGATGGAAGCTGAGCA...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTTCGCAGGGGAAAATCTaGCTAACAACAGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCSQGKI*LTTVSA
Trigger: GGCACTGACTGTTGTTAGCCAGATTTTCCCCTGCGA...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCATTAGAAGAGTGCGCCTaGGATGTCAATTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPLEECA*DVNLVT
Trigger: TGTGACCAAATTGACATCTCAGGCGCACTCTTCTAA...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAGCGCTGCACCCTGACTaGGTCCTTCAGCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLALHPD*VLQPQN
Trigger: GTTTTGTGGCTGAAGGACTCAGTCAGGGTGCAGCGC...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCATCCAGTGAAGCCAGATaGAGAAAAGGAGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPSSEAR*RKGESI
Trigger: TATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGA...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTCTTTTCCCAGCAGGTTaGTTGTACTTTCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTALFPAG*LYFLIL
Trigger: TAGGATCAGAAAGTACAATCAACCTGCTGGGAAAAG...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACGCTTTCCTTGGCAACTaGGGCTGCAGTAGATTGAGG +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDAFLGN*GCSRLR
Trigger: CCTCAATCTACTGCAGCCTCAGTTGCCAAGGAAAGC...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTTGCAGCTACCACTCATaGATACACCCTGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCCSYHS*IHPVTK
Trigger: CTTGGTTACAGGGTGTATTCATGAGTGGTAGCTGCA...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAATCAAACCCTGAGCTCTaGTCTGCCTGCCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKSNPEL*SACLHR
Trigger: CCTGTGGAGGCAGGCAGATCAGAGCTCAGGGTTTGA...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTGCCGCGGACAAGGCTaGCCAGCCTCGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNCRGQG*PASRRR
Trigger: CCTTCTCCTCGAGGCTGGGCAGCCTTGTCCGCGGCA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAATGCCGCGGACAAGGCTaGCCAGCCTCGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKCRGQG*PASRRR
Trigger: CCTTCTCCTCGAGGCTGGGCAGCCTTGTCCGCGGCA...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCTGCCGCGGACAAGGCTaGCCAGCCTCGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KDMVNSWINLSTVLEECACRGQG*PASRRR
Trigger: CCTTCTCCTCGAGGCTGGGCAGCCTTGTCCGCGGCA...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATATTCTAAGATATATATaGAAGGAGGCAGCCATGACC +
Preference number: 4 (lower is better)
Translates to: NAVSRGWMGAADRPIALHILRYI*KEAAMT
Trigger: GGTCATGGCTGCCTCCTTGCATATATATCTTAGAAT...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACAGGTTTGTAAGGCGCTaGACCCTGACTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDRFVRR*TLTESF
Trigger: GAAGGACTCAGTCAGGGTGCAGCGCCTTACAAACCT...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTGCATCTTACACCTATTaGTTCACACTCGACCTAGCC +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCASYTY*FTLDLA
Trigger: GGCTAGGTCGAGTGTGAAGCAATAGGTGTAAGATGC...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATGGCCCACCACCGGGCTaGTTCTGCAGAAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHGPPPG*FCRKSP
Trigger: GGGACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCC...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAGGCCCACCACCGGGCTaGTTCTGCAGAAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LIADLLFHHQNLPLVVSEGPPPG*FCRKSP
Trigger: GGGACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCC...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp TTCAATTATTGTCATCTGGTGTTGAAGAGCCAGAGTAGGATCCTGTTGGATAACGCAGTAAGCAGGGGATaGATGGGAGCAGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: FNYCHLVLKSQSRILLDNAVSRG*MGAADR
Trigger: CCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGC...GTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTCTTGTTGGGCTAACTTaGTTGCATGAATATAGCCAA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTALVGLT*LHEYSQ
Trigger: TTGGCTATATTCATGCAATCAAGTTAGCCCAACAAG...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCAGCAAGGAGGCAGCCATaGCCCCAACATCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSARRQP*PQHLCH
Trigger: GTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGC...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp AGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCAGGCAAGGAGGCAGCCATaGCCCCAACATCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SIHCLNKPCIIRSIFLSQARRQP*PQHLCH
Trigger: GTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGC...CTGGCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTGTTGCTCAGTCACCTTaGAATTTTCTGCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAVAQSP*NFLQEK
Trigger: TTTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAAC...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAATGGATGGGAGCAGCTaGCAGGCCAATAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKMDGSS*QANSPS
Trigger: TGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCAT...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCATGGATGGGAGCAGCTaGCAGGCCAATAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSMDGSS*QANSPS
Trigger: TGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCAT...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTCATCTTAAAGACATGTaGATAGGTTCAGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAHLKDM*IGSVHS
Trigger: AGAGTGCACTGAACCTATTCACATGTCTTTAAGATG...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACCCACCGGGCTGGTTCTaGAGAAAGAGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNPPGWF*RKSPGS
Trigger: GCTGCCGGGACTCTTTCTGCAGAACCAGCCCGGTGG...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACCACCGGGCTGGTTCTaGAGAAAGAGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKPPGWF*RKSPGS
Trigger: GCTGCCGGGACTCTTTCTGCAGAACCAGCCCGGTGG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTACTAGGTTAGTGCTCTaGAGATCCTTTACAACTGTA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTATRLVL*RSFTTV
Trigger: TACAGTTGTAAAGGATCTGCAGAGCACTAACCTAGT...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTATTCTAAGATATATATaGAAGGAGGCAGCCATGACC +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAILRYI*KEAAMT
Trigger: GGTCATGGCTGCCTCCTTGCATATATATCTTAGAAT...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTTCGCAGGGGAAAATCTaGCTAACAACAGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFASQGKI*LTTVSA
Trigger: GGCACTGACTGTTGTTAGCCAGATTTTCCCCTGCGA...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCGCAGTAAGCAGGGGATaGATGGGAGCAGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIAVSRG*MGAADR
Trigger: CCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGC...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp AGTGCGCCTGAGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTTTATTGTCATCTGGTGTTaGAGAGCCAGAGTAGGATCC +
Preference number: 4 (lower is better)
Translates to: SAPEMSIWSQQQLTRLLFIVIWC*RARVGS
Trigger: GGATCCTACTCTGGCTCTTCAACACCAGATGACAAT...AAACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTATTGTCATCTGGTGTTaGAGAGCCAGAGTAGGATCC +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFAIVIWC*RARVGS
Trigger: GGATCCTACTCTGGCTCTTCAACACCAGATGACAAT...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTTCCATTATACTCTCTTaGGGAACAGGCAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LDGVKFSRASARIPPSPFSIILS*GTGRAP
Trigger: TGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGA...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTACATTCTCCATTATACTCTCTTGAGGAACAGGCAGAGCTCCACTTTCATCACTCCATTATACTCTCTTaGGGAACAGGCAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LHSPLYSLEEQAELHFHHSIILS*GTGRAP
Trigger: TGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGA...GTGATGAAAGTGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCGCTTTCCTTGGCAACTaGGGCTGCAGTAGATTGAGG +
Preference number: 4 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSAFLGN*GCSRLR
Trigger: CCTCAATCTACTGCAGCCTCAGTTGCCAAGGAAAGC...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCAGTTGCTCAGTCACCTTaGAATTTTCTGCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPVAQSP*NFLQEK
Trigger: TTTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAAC...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAGGAGCACCTCCTTTGTaGCATGCTGCATTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLGAPPL*HAAFLC
Trigger: GCAAAGGAATGCAGCATGTCACAAAGGAGGTGCTCC...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCAGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPEQIFQ*TWQPSQ
Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTAGGAGGAACCTATTATaGAAGAAATTCCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTARRNLL*KKFQSL
Trigger: AAGTGACTGGAATTTCTTGCATAATAGGTTCCTCCT...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACCCCCAGATTCACACTTaGTGCCATCTCCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDPQIHT*CHLHFQ
Trigger: CTGAAAATGGAGATGGCAGCAAGTGTGAATCTGGGG...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACCCTCTACAGGACACATaGTGTGCTTGGTATACTTGG +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDPLQDT*CAWYTW
Trigger: CCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGG...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTTTAGGGATACAGTTTTaGGGATCTTTCTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCLGIQF*GSFLTR
Trigger: CCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAA...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGCAAGGAGGCAGCCATaGCCCCAACATCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKARRQP*PQHLCH
Trigger: GTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTATTCCCAGATACATCTaGACCAAGAGAAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: LDGVKFSRASARIPPSPFIPRYI*TKRNAS
Trigger: GCTGGCATTTCTCTTGGTTCAGATGTATCTGGGAAT...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCGCTTTCCTTGGCAACTaGGGCTGCAGTAGATTGAGG +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIAFLGN*GCSRLR
Trigger: CCTCAATCTACTGCAGCCTCAGTTGCCAAGGAAAGC...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp CTAATACATCTGCATGAACTCGGCAATGCAGTAAGCAGGGGATGGATGGGAGCAATCTGCACACTATATTaGAAGCTTTTGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LIHLHELGNAVSRGWMGAICTLY*KLLVLS
Trigger: AGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGAT...TGCTCCCATCCATCCCCTGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAGGAGCACCTCCTTTGTaGCATGCTGCATTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRGAPPL*HAAFLC
Trigger: GCAAAGGAATGCAGCATGTCACAAAGGAGGTGCTCC...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTACATTCTCCATTATACTCTCTTGAGGAACAGGCAGAGCTCCACTTTCATCACAATTTTTCTTCTTCGTaGTTGGAGGTGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LHSPLYSLEEQAELHFHHNFSSS*LEVRAV
Trigger: CACAGCCCTCACCTCCAAGCACGAAGAAGAAAAATT...GTGATGAAAGTGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTACTAGGTTAGTGCTCTaGAGATCCTTTACAACTGTA +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCTRLVL*RSFTTV
Trigger: TACAGTTGTAAAGGATCTGCAGAGCACTAACCTAGT...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTATTCTAAGATATATATaGAAGGAGGCAGCCATGACC +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCILRYI*KEAAMT
Trigger: GGTCATGGCTGCCTCCTTGCATATATATCTTAGAAT...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTAGGTTTGTAAGGCGCTaGACCCTGACTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGRFVRR*TLTESF
Trigger: GAAGGACTCAGTCAGGGTGCAGCGCCTTACAAACCT...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp TTCAATTATTGTCATCTGGTGTTGAAGAGCCAGAGTAGGATCCTGTTGGATAACCTGAACCAAGAGAAATaGCAGCAGGAGACTGTCGTC +
Preference number: 4 (lower is better)
Translates to: FNYCHLVLKSQSRILLDNLNQEK*QQETVV
Trigger: GACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAG...GTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACTTAGACAGCTCTGTATaGCAAGCATGTCTCTCACGA +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDLDSSV*QACLSR
Trigger: TCGTGAGAGACATGCTTGGCATACAGAGCTGTCTAA...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTTACAGTCACATCTCCTaGAATGCAAAAATAAAGGTT +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAYSHIS*NAKIKV
Trigger: AACCTTTATTTTTGCATTGCAGGAGATGTGACTGTA...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAATCGCAGGGGAAAATCTaGCTAACAACAGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKSQGKI*LTTVSA
Trigger: GGCACTGACTGTTGTTAGCCAGATTTTCCCCTGCGA...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTTTAGGAGCAATGAGATaGAATTTGTATAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTALGAMR*NLYNAR
Trigger: TCTGGCATTATACAAATTCCATCTCATTGCTCCTAA...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTTGCAAAAATAAAGGTTaGTGGACACCTGATTTACAA +
Preference number: 4 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTACKNKG*WTPDLQ
Trigger: TTGTAAATCAGGTGTCCACCAACCTTTATTTTTGCA...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACCTTTTCCCAGCAGGTTaGTTGTACTTTCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDLFPAG*LYFLIL
Trigger: TAGGATCAGAAAGTACAATCAACCTGCTGGGAAAAG...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAACCAAGGGCAGTTCTGTaGGTGACTCAGAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKPRAVL*VTQNPK
Trigger: TTTTGGATTCTGAGTCACTCACAGAACTGCCCTTGG...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTGACTTCCATAGCATTTaGGTGTATGTATTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCDFHSI*VYVFSS
Trigger: ACTACTGAATACATACACTCAAATGCTATGGAAGTC...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAATGGATGGGAGCAGCTaGCAGGCCAATAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKMDGSS*QANSPS
Trigger: TGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCAT...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTACATTCCTTTGCAAAGTaGGAAGGCACTTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLHSFAK*EGTSSL
Trigger: CAGAGAGGAAGTGCCTTCTCACTTTGCAAAGGAATG...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCAAGACTACTCAGTTCCTaGTGGATTAATTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPRLLSS*WINFSS
Trigger: AGAAGAAAAATTAATCCAGCAGGAACTGAGTAGTCT...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCCTGAACCAAGAGAAATaGCAGCAGGAGACTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGILNQEK*QQETVV
Trigger: GACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAG...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTTTTCATCACCAGTTTTaGTTTCCTTCTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCFHHQF*FPSWED
Trigger: ATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAA...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGCTTTTGGTGCTTTCTaGTTCCATTACAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: LDGVKFSRASARIPPSPFAFGAF*FHYRQT
Trigger: TGTTTGCCTGTAATGGAAGCAGAAAGCACCAAAAGC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTGCTCAGCTTCCATCTaGAGTTTCTCTAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGICSASI*SFSSRT
Trigger: GGTCCTGCTAGAGAAACTGCAGATGGAAGCTGAGCA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAACCTCTACAGGACACATaGTGTGCTTGGTATACTTGG +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKPLQDT*CAWYTW
Trigger: CCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGG...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp AGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCAGTCGCAGGGGAAAATCTaGCTAACAACAGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SIHCLNKPCIIRSIFLSQSQGKI*LTTVSA
Trigger: GGCACTGACTGTTGTTAGCCAGATTTTCCCCTGCGA...CTGGCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
3UTR CAA 72 bp ATCAGGAGCATATGTTTCTCAGCCAGCTCTGCTATTTaGCCGACCAAATTGACGATGACATACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: IRSICFSASSAI*PTKLTMTYSSL
Trigger: CAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCTGAGAAACATATGCTCCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558439.5
CDS-3UTR TCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACCTTGTTGGGCTAACTTaGTTGCATGAATATAGCCAA +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDLVGLT*LHEYSQ
Trigger: TTGGCTATATTCATGCAATCAAGTTAGCCCAACAAG...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAGCACACTGTGGTAATTaGATTCTACTGGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKAHCGN*ILLGAF
Trigger: GAAAGCTCCCAGTAGAATTCAATTACCACAGTGTGC...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTAGTATTCTCAAGAGCTaGATTTGTAACCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFASILKS*ICNHGA
Trigger: AGCACCATGGTTACAAATTCAGCTCTTGAGAATACT...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAATTGTCATCTGGTGTTaGAGAGCCAGAGTAGGATCC +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRIVIWC*RARVGS
Trigger: GGATCCTACTCTGGCTCTTCAACACCAGATGACAAT...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCAATTGTCATCTGGTGTTaGAGAGCCAGAGTAGGATCC +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSIVIWC*RARVGS
Trigger: GGATCCTACTCTGGCTCTTCAACACCAGATGACAAT...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAATTAGAAGAGTGCGCCTaGGATGTCAATTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKLEECA*DVNLVT
Trigger: TGTGACCAAATTGACATCTCAGGCGCACTCTTCTAA...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAATCCAGTGAAGCCAGATaGAGAAAAGGAGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKSSEAR*RKGESI
Trigger: TATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGA...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCTCCAGTGAAGCCAGATaGAGAAAAGGAGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSSSEAR*RKGESI
Trigger: TATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGA...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCATTCCCAGATACATCTaGACCAAGAGAAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSIPRYI*TKRNAS
Trigger: GCTGGCATTTCTCTTGGTTCAGATGTATCTGGGAAT...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGATCCATTATACTCTCTTaGGGAACAGGCAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRSIILS*GTGRAP
Trigger: TGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGA...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCACCAAGGGCAGTTCTGTaGGTGACTCAGAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSPRAVL*VTQNPK
Trigger: TTTTGGATTCTGAGTCACTCACAGAACTGCCCTTGG...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGTTGCTCAGTCACCTTaGAATTTTCTGCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LDGVKFSRASARIPPSPFVAQSP*NFLQEK
Trigger: TTTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAAC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAGCTAATACATCTGCATaGACTCGGCAATGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLANTSA*TRQCSK
Trigger: CTTACTGCATTGCCGAGTTCATGCAGATGTATTAGC...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAGCTAATACATCTGCATaGACTCGGCAATGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKANTSA*TRQCSK
Trigger: CTTACTGCATTGCCGAGTTCATGCAGATGTATTAGC...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGACATTCCTTTGCAAAGTaGGAAGGCACTTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRHSFAK*EGTSSL
Trigger: CAGAGAGGAAGTGCCTTCTCACTTTGCAAAGGAATG...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAAAATTTTTCTTCTTCGTaGTTGGAGGTGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RLQYENFSTKGSSVSDSENFSSS*LEVRAV
Trigger: CACAGCCCTCACCTCCAAGCACGAAGAAGAAAAATT...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp AGTGCGCCTGAGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTTTACTAGGTTAGTGCTCTaGAGATCCTTTACAACTGTA +
Preference number: 4 (lower is better)
Translates to: SAPEMSIWSQQQLTRLLFTRLVL*RSFTTV
Trigger: TACAGTTGTAAAGGATCTGCAGAGCACTAACCTAGT...AAACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTATTCTAAGATATATATaGAAGGAGGCAGCCATGACC +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFAILRYI*KEAAMT
Trigger: GGTCATGGCTGCCTCCTTGCATATATATCTTAGAAT...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFAEQIFQ*TWQPSQ
Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACTTGGGAATATCAGGATaGATTACATCTCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDLGISG*ITSPPT
Trigger: AGTAGGAGGAGATGTAATGCATCCTGATATTCCCAA...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTTTGGGAATATCAGGATaGATTACATCTCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFALGISG*ITSPPT
Trigger: AGTAGGAGGAGATGTAATGCATCCTGATATTCCCAA...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAAGGTTTGTAAGGCGCTaGACCCTGACTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKRFVRR*TLTESF
Trigger: GAAGGACTCAGTCAGGGTGCAGCGCCTTACAAACCT...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCAGGTTTGTAAGGCGCTaGACCCTGACTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGRFVRR*TLTESF
Trigger: GAAGGACTCAGTCAGGGTGCAGCGCCTTACAAACCT...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCGTGAGAGACAGTATCTaGTTTTCCCAGCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSVRDSI*FSQQVD
Trigger: ATCAACCTGCTGGGAAAAGCAGATACTGTCTCTCAC...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAGTGAGAGACAGTATCTaGTTTTCCCAGCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLVRDSI*FSQQVD
Trigger: ATCAACCTGCTGGGAAAAGCAGATACTGTCTCTCAC...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCGTGAGAGACAGTATCTaGTTTTCCCAGCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GISGCITSPPTENTAFIVVRDSI*FSQQVD
Trigger: ATCAACCTGCTGGGAAAAGCAGATACTGTCTCTCAC...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTTACAGTCACATCTCCTaGAATGCAAAAATAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCYSHIS*NAKIKV
Trigger: AACCTTTATTTTTGCATTGCAGGAGATGTGACTGTA...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAATTAGCAGTTGGTAACTaGTCAGCTTCCATCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKLAVGN*SASICS
Trigger: ACTGCAGATGGAAGCTGAGCAGTTACCAACTGCTAA...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATTCGCAGGGGAAAATCTaGCTAACAACAGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHSQGKI*LTTVSA
Trigger: GGCACTGACTGTTGTTAGCCAGATTTTCCCCTGCGA...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACGTAATTGAATTCTACTaGGAGCTTTCCTCCAACTAC +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDVIEFY*ELSSNY
Trigger: GTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTAC...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTTTTTGCTTTCCTTCTTaGGAAGATAGCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQLCYFADQIDDDILFFAFCFPS*EDSLLS
Trigger: GGAAAGAAGGCTATCTTCCCAAGAAGGAAAGCAAAA...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp GATCTACATTCTCCATTATACTCTCTTGAGGAACAGGCAGAGCTCCACTTTCATTTAGGGATACAGTTTTaGGGATCTTTCTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: DLHSPLYSLEEQAELHFHLGIQF*GSFLTR
Trigger: CCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAA...ATGAAAGTGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCGACACCATGTTCCTTTaGGCAGACCCAAAATCATGC +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIDTMFL*ADPKSC
Trigger: GCATGATTTTGGGTCTGCCCAAAGGAACATGGTGTC...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCCCACAGGGACTATTCTaGTACCCTTCTTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGPQGLF*YPSSSV
Trigger: GACGGAGGAAGAAGGGTACCAGAATAGTCCCTGTGG...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAGACACATGCTGTGCTTaGTATACTTGGCACATTAGC +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKDTCCA*YTWHIS
Trigger: GCTAATGTGCCAAGTATACCAAGCACAGCATGTGTC...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTCAGTGCACTCTCAGTaGCTCACAATCATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGISVHSQ*LTIMRQ
Trigger: TTGCCTCATGATTGTGAGCCACTGAGAGTGCACTGA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCGAGACTGTCGTCCAGTaGAGCCAGATGAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGETVVQ*SQMKKR
Trigger: CCTTTTCTTCATCTGGCTTCACTGGACGACAGTCTC...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCGAGACTGTCGTCCAGTaGAGCCAGATGAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: KDMVNSWINLSTVLEECAETVVQ*SQMKKR
Trigger: CCTTTTCTTCATCTGGCTTCACTGGACGACAGTCTC...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGAGACTGTCGTCCAGTaGAGCCAGATGAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKETVVQ*SQMKKR
Trigger: CCTTTTCTTCATCTGGCTTCACTGGACGACAGTCTC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACCTTTTGATTTCCTTCTaGACTTGTGAGAGACAGTAT +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDLLISF*TCERQY
Trigger: ATACTGTCTCTCACAAGTTCAGAAGGAAATCAAAAG...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AGTGCGCCTGAGATGTCAATTTGGTCACAGCAGCAATTAACCAGGCTTTTGTTTCTTTTGATTTCCTTCTaGACTTGTGAGAGACAGTAT +
Preference number: 4 (lower is better)
Translates to: SAPEMSIWSQQQLTRLLFLLISF*TCERQY
Trigger: ATACTGTCTCTCACAAGTTCAGAAGGAAATCAAAAG...AAACAAAAGCCTGGTTAATTGCTGCTGTGACCAAATTGACATCTCAGGCGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGTTATTAGCAAACAATaGAGGTGTAGACAGACTACA +
Preference number: 4 (lower is better)
Translates to: LDGVKFSRASARIPPSPFVISKQ*RCRQTT
Trigger: TGTAGTCTGTCTACACCTTCATTGTTTGCTAATAAC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTGCTAATACATCTGCATaGACTCGGCAATGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGANTSA*TRQCSK
Trigger: CTTACTGCATTGCCGAGTTCATGCAGATGTATTAGC...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCAATTTTTCTTCTTCGTaGTTGGAGGTGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGINFSSS*LEVRAV
Trigger: CACAGCCCTCACCTCCAAGCACGAAGAAGAAAAATT...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAAATTTTTCTTCTTCGTaGTTGGAGGTGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRNFSSS*LEVRAV
Trigger: CACAGCCCTCACCTCCAAGCACGAAGAAGAAAAATT...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp CACAGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCAATTTTTCTTCTTCGTaGTTGGAGGTGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSIHCLNKPCIIRSIFLSNFSSS*LEVRAV
Trigger: CACAGCCCTCACCTCCAAGCACGAAGAAGAAAAATT...GCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCCTGAACCAAGAGAAATaGCAGCAGGAGACTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGLNQEK*QQETVV
Trigger: GACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAG...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCGTGAGAGACAGTATCTaGTTTTCCCAGCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIVRDSI*FSQQVD
Trigger: ATCAACCTGCTGGGAAAAGCAGATACTGTCTCTCAC...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAGCTTTTGGTGCTTTCTaGTTCCATTACAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKAFGAF*FHYRQT
Trigger: TGTTTGCCTGTAATGGAAGCAGAAAGCACCAAAAGC...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGACCTCAATATCCAGCATaGTCATGGATCTCCTACAAC +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRPQYPA*SWISYN
Trigger: GTTGTAGGAGATCCATGAGCATGCTGGATATTGAGG...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGACATGCTGCATTCCTTTaGAAAGTGAGAAGGCACTTC +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRHAAFL*KVRRHF
Trigger: GAAGTGCCTTCTCACTTTGCAAAGGAATGCAGCATG...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTTAGACAGCTCTGTATaGCAAGCATGTCTCTCACGA +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGILDSSV*QACLSR
Trigger: TCGTGAGAGACATGCTTGGCATACAGAGCTGTCTAA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTACAGATTCACACTTGCTaGCATCTCCATTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLQIHTC*HLHFQQ
Trigger: TTGCTGAAAATGGAGATGGCAGCAAGTGTGAATCTG...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: LDGVKFSRASARIPPSPFIFQCT*QPSQVI
Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAGACACATGCTGTGCTTaGTATACTTGGCACATTAGC +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRDTCCA*YTWHIS
Trigger: GCTAATGTGCCAAGTATACCAAGCACAGCATGTGTC...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAGCACACTGTGGTAATTaGATTCTACTGGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LIADLLFHHQNLPLVVSEAHCGN*ILLGAF
Trigger: GAAAGCTCCCAGTAGAATTCAATTACCACAGTGTGC...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAAGTATTCTCAAGAGCTaGATTTGTAACCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLSILKS*ICNHGA
Trigger: AGCACCATGGTTACAAATTCAGCTCTTGAGAATACT...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTACCATATCCAGTAAAGTaGGATAAGACTGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLPYPVK*DKTELH
Trigger: ATGCAGTTCAGTCTTATCTCACTTTACTGGATATGG...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAATCCATTATACTCTCTTaGGGAACAGGCAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKSIILS*GTGRAP
Trigger: TGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGA...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAGCTAATACATCTGCATaGACTCGGCAATGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LIADLLFHHQNLPLVVSEANTSA*TRQCSK
Trigger: CTTACTGCATTGCCGAGTTCATGCAGATGTATTAGC...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACAGACTACTCAGTTCCTaGTGGATTAATTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDRLLSS*WINFSS
Trigger: AGAAGAAAAATTAATCCAGCAGGAACTGAGTAGTCT...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCACTAGGTTAGTGCTCTaGAGATCCTTTACAACTGTA +
Preference number: 4 (lower is better)
Translates to: GISGCITSPPTENTAFIVTRLVL*RSFTTV
Trigger: TACAGTTGTAAAGGATCTGCAGAGCACTAACCTAGT...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp TTCAATTATTGTCATCTGGTGTTGAAGAGCCAGAGTAGGATCCTGTTGGATAACATTCTAAGATATATATaGAAGGAGGCAGCCATGACC +
Preference number: 4 (lower is better)
Translates to: FNYCHLVLKSQSRILLDNILRYI*KEAAMT
Trigger: GGTCATGGCTGCCTCCTTGCATATATATCTTAGAAT...GTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp TTCAATTATTGTCATCTGGTGTTGAAGAGCCAGAGTAGGATCCTGTTGGATAACAAACAGCATCCAGGTTaGTCAGTCACCTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: FNYCHLVLKSQSRILLDNKQHPG*SVTLKF
Trigger: AAATTTCAAGGTGACTGAGCAACCTGGATGCTGTTT...GTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAAAACAGCATCCAGGTTaGTCAGTCACCTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLKQHPG*SVTLKF
Trigger: AAATTTCAAGGTGACTGAGCAACCTGGATGCTGTTT...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCGCTTTTGGTGCTTTCTaGTTCCATTACAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIAFGAF*FHYRQT
Trigger: TGTTTGCCTGTAATGGAAGCAGAAAGCACCAAAAGC...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGCATCTTACACCTATTaGTTCACACTCGACCTAGCC +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKASYTY*FTLDLA
Trigger: GGCTAGGTCGAGTGTGAAGCAATAGGTGTAAGATGC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACCCCAGATTCACACTTaGTGCCATCTCCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKPQIHT*CHLHFQ
Trigger: CTGAAAATGGAGATGGCAGCAAGTGTGAATCTGGGG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCCCTGAGATGTCAATTTaGTCACAGCAGCAATTAACC +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIPEMSI*SQQQLT
Trigger: GGTTAATTGCTGCTGTGACCAAATTGACATCTCAGG...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCACCTGAGATGTCAATTTaGTCACAGCAGCAATTAACC +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSPEMSI*SQQQLT
Trigger: GGTTAATTGCTGCTGTGACCAAATTGACATCTCAGG...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp CACAGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCCTGAGATGTCAATTTaGTCACAGCAGCAATTAACC +
Preference number: 4 (lower is better)
Translates to: HSIHCLNKPCIIRSIFLSPEMSI*SQQQLT
Trigger: GGTTAATTGCTGCTGTGACCAAATTGACATCTCAGG...GCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561393.5
CDS-3UTR CCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTATTTTGCTTTCCTTCTTaGGAAGATAGCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLFCFPS*EDSLLS
Trigger: GGAAAGAAGGCTATCTTCCCAAGAAGGAAAGCAAAA...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAATTAGGGATACAGTTTTaGGGATCTTTCTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWELGIQF*GSFLTR
Trigger: CCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAA...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAATCAGAATTCCTGACCTaGGTGATTAACAGTACCAAT +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKSEFLT*VINSTN
Trigger: ATTGGTACTGTTAATCACCCAGGTCAGGAATTCTGA...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACTGCAAAAATAAAGGTTaGTGGACACCTGATTTACAA +
Preference number: 4 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDCKNKG*WTPDLQ
Trigger: TTGTAAATCAGGTGTCCACCAACCTTTATTTTTGCA...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCAGCTTGTTGGGCTAACTTaGTTGCATGAATATAGCCAA +
Preference number: 4 (lower is better)
Translates to: SIHCLNKPCIIRSIFLSQLVGLT*LHEYSQ
Trigger: TTGGCTATATTCATGCAATCAAGTTAGCCCAACAAG...CTGGCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCACTTGTTGGGCTAACTTaGTTGCATGAATATAGCCAA +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSLVGLT*LHEYSQ
Trigger: TTGGCTATATTCATGCAATCAAGTTAGCCCAACAAG...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCGCACACTGTGGTAATTaGATTCTACTGGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KDMVNSWINLSTVLEECAAHCGN*ILLGAF
Trigger: GAAAGCTCCCAGTAGAATTCAATTACCACAGTGTGC...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAAAGTATTCTCAAGAGCTaGATTTGTAACCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWESILKS*ICNHGA
Trigger: AGCACCATGGTTACAAATTCAGCTCTTGAGAATACT...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCCCATATCCAGTAAAGTaGGATAAGACTGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIPYPVK*DKTELH
Trigger: ATGCAGTTCAGTCTTATCTCACTTTACTGGATATGG...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAACCATATCCAGTAAAGTaGGATAAGACTGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEPYPVK*DKTELH
Trigger: ATGCAGTTCAGTCTTATCTCACTTTACTGGATATGG...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCACCATATCCAGTAAAGTaGGATAAGACTGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSPYPVK*DKTELH
Trigger: ATGCAGTTCAGTCTTATCTCACTTTACTGGATATGG...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTTAGAAGAGTGCGCCTaGGATGTCAATTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNLEECA*DVNLVT
Trigger: TGTGACCAAATTGACATCTCAGGCGCACTCTTCTAA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAATTAGAAGAGTGCGCCTaGGATGTCAATTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKLEECA*DVNLVT
Trigger: TGTGACCAAATTGACATCTCAGGCGCACTCTTCTAA...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCATTCCCAGATACATCTaGACCAAGAGAAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGIPRYI*TKRNAS
Trigger: GCTGGCATTTCTCTTGGTTCAGATGTATCTGGGAAT...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATCTTTTCCCAGCAGGTTaGTTGTACTTTCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHLFPAG*LYFLIL
Trigger: TAGGATCAGAAAGTACAATCAACCTGCTGGGAAAAG...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTTCCTTCTGAACTTGTaGGAGACAGTATCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIFLLNL*ETVSAF
Trigger: AAAAGCAGATACTGTCTCTCACAAGTTCAGAAGGAA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGATTCCTTCTGAACTTGTaGGAGACAGTATCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRFLLNL*ETVSAF
Trigger: AAAAGCAGATACTGTCTCTCACAAGTTCAGAAGGAA...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAATTCCTTCTGAACTTGTaGGAGACAGTATCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEFLLNL*ETVSAF
Trigger: AAAAGCAGATACTGTCTCTCACAAGTTCAGAAGGAA...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCGTTATTAGCAAACAATaGAGGTGTAGACAGACTACA +
Preference number: 4 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSVISKQ*RCRQTT
Trigger: TGTAGTCTGTCTACACCTTCATTGTTTGCTAATAAC...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAGACTTCCATAGCATTTaGGTGTATGTATTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLDFHSI*VYVFSS
Trigger: ACTACTGAATACATACACTCAAATGCTATGGAAGTC...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCGACTTCCATAGCATTTaGGTGTATGTATTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: GISGCITSPPTENTAFIVDFHSI*VYVFSS
Trigger: ACTACTGAATACATACACTCAAATGCTATGGAAGTC...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAATCTGCACACTATATTaGAAGCTTTTGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLICTLY*KLLVLS
Trigger: AGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGAT...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCGAAGGAAGTGCAGCTTaGGATTCTGACATTTTTACA +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIEGSAA*DSDIFT
Trigger: TGTAAAAATGTCAGAATCTCAAGCTGCACTTCCTTC...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCAGAAGGAAGTGCAGCTTaGGATTCTGACATTTTTACA +
Preference number: 4 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSEGSAA*DSDIFT
Trigger: TGTAAAAATGTCAGAATCTCAAGCTGCACTTCCTTC...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGACATCTTAAAGACATGTaGATAGGTTCAGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRHLKDM*IGSVHS
Trigger: AGAGTGCACTGAACCTATTCACATGTCTTTAAGATG...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAAACTAGGTTAGTGCTCTaGAGATCCTTTACAACTGTA +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWETRLVL*RSFTTV
Trigger: TACAGTTGTAAAGGATCTGCAGAGCACTAACCTAGT...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCTTTCATCACCAGTTTTaGTTTCCTTCTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GISGCITSPPTENTAFIVFHHQF*FPSWED
Trigger: ATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAA...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACCTCAATATCCAGCATaGTCATGGATCTCCTACAAC +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKPQYPA*SWISYN
Trigger: GTTGTAGGAGATCCATGAGCATGCTGGATATTGAGG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACATGCTGCATTCCTTTaGAAAGTGAGAAGGCACTTC +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKHAAFL*KVRRHF
Trigger: GAAGTGCCTTCTCACTTTGCAAAGGAATGCAGCATG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTTAGCAGTTGGTAACTaGTCAGCTTCCATCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNLAVGN*SASICS
Trigger: ACTGCAGATGGAAGCTGAGCAGTTACCAACTGCTAA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAGTAATTGAATTCTACTaGGAGCTTTCCTCCAACTAC +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRVIEFY*ELSSNY
Trigger: GTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTAC...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CCA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTGTAATTGAATTCTACTaGGAGCTTTCCTCCAACTAC +
Preference number: 4 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGVIEFY*ELSSNY
Trigger: GTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTAC...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAAGTAATTGAATTCTACTaGGAGCTTTCCTCCAACTAC +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEVIEFY*ELSSNY
Trigger: GTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTAC...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp AGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCAGGTAATTGAATTCTACTaGGAGCTTTCCTCCAACTAC +
Preference number: 4 (lower is better)
Translates to: SIHCLNKPCIIRSIFLSQVIEFY*ELSSNY
Trigger: GTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTAC...CTGGCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTTTTGCTTTCCTTCTTaGGAAGATAGCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIFCFPS*EDSLLS
Trigger: GGAAAGAAGGCTATCTTCCCAAGAAGGAAAGCAAAA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
3UTR CAA 72 bp CTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTaGGGGATCTTTCTTGACCAGGAATCACAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LYNPELKVRDTV*GIFLDQESQRK
Trigger: TTTTCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCCTTTTGATTTCCTTCTaGACTTGTGAGAGACAGTAT +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGILLISF*TCERQY
Trigger: ATACTGTCTCTCACAAGTTCAGAAGGAAATCAAAAG...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAAGACTTCCATAGCATTTaGGTGTATGTATTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEDFHSI*VYVFSS
Trigger: ACTACTGAATACATACACTCAAATGCTATGGAAGTC...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAATCTCTGTCACAAAGTaGTTTCCGAAACTTAATATG +
Preference number: 4 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKISVTK*FPKLNM
Trigger: CATATTAAGTTTCGGAAAGCACTTTGTGACAGAGAT...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCATCTCTGTCACAAAGTaGTTTCCGAAACTTAATATG +
Preference number: 4 (lower is better)
Translates to: GISGCITSPPTENTAFIVISVTK*FPKLNM
Trigger: CATATTAAGTTTCGGAAAGCACTTTGTGACAGAGAT...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LIADLLFHHQNLPLVVSEEQIFQ*TWQPSQ
Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAATTGGGAATATCAGGATaGATTACATCTCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: LIADLLFHHQNLPLVVSELGISG*ITSPPT
Trigger: AGTAGGAGGAGATGTAATGCATCCTGATATTCCCAA...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAATTTCATCACCAGTTTTaGTTTCCTTCTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEFHHQF*FPSWED
Trigger: ATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAA...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGCTTTTGGTGCTTTCTaGTTCCATTACAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKAFGAF*FHYRQT
Trigger: TGTTTGCCTGTAATGGAAGCAGAAAGCACCAAAAGC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACACCTCCTTTGTGACATaGTGCATTCCTTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNTSFVT*CIPLQS
Trigger: ACTTTGCAAAGGAATGCAGCATGTCACAAAGGAGGT...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCACCTCCTTTGTGACATaGTGCATTCCTTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGTSFVT*CIPLQS
Trigger: ACTTTGCAAAGGAATGCAGCATGTCACAAAGGAGGT...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACCAGATTCACACTTGCTaGCATCTCCATTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNQIHTC*HLHFQQ
Trigger: TTGCTGAAAATGGAGATGGCAGCAAGTGTGAATCTG...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAAATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEIFQCT*QPSQVI
Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIIFQCT*QPSQVI
Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACCTGAGATGTCAATTTaGTCACAGCAGCAATTAACC +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKPEMSI*SQQQLT
Trigger: GGTTAATTGCTGCTGTGACCAAATTGACATCTCAGG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATTTTTGCTTTCCTTCTTaGGAAGATAGCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHFCFPS*EDSLLS
Trigger: GGAAAGAAGGCTATCTTCCCAAGAAGGAAAGCAAAA...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACTTGTTGGGCTAACTTaGTTGCATGAATATAGCCAA +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKLVGLT*LHEYSQ
Trigger: TTGGCTATATTCATGCAATCAAGTTAGCCCAACAAG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAAGTATTCTCAAGAGCTaGATTTGTAACCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKSILKS*ICNHGA
Trigger: AGCACCATGGTTACAAATTCAGCTCTTGAGAATACT...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR TCA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCAGTATTCTCAAGAGCTaGATTTGTAACCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: KDMVNSWINLSTVLEECASILKS*ICNHGA
Trigger: AGCACCATGGTTACAAATTCAGCTCTTGAGAATACT...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCCCATATCCAGTAAAGTaGGATAAGACTGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGPYPVK*DKTELH
Trigger: ATGCAGTTCAGTCTTATCTCACTTTACTGGATATGG...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATCTTTTGATTTCCTTCTaGACTTGTGAGAGACAGTAT +
Preference number: 4 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHLLISF*TCERQY
Trigger: ATACTGTCTCTCACAAGTTCAGAAGGAAATCAAAAG...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR TCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCGAAGGAAGTGCAGCTTaGGATTCTGACATTTTTACA +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGEGSAA*DSDIFT
Trigger: TGTAAAAATGTCAGAATCTCAAGCTGCACTTCCTTC...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGAAGGAAGTGCAGCTTaGGATTCTGACATTTTTACA +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKEGSAA*DSDIFT
Trigger: TGTAAAAATGTCAGAATCTCAAGCTGCACTTCCTTC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAAGACTACTCAGTTCCTaGTGGATTAATTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRRLLSS*WINFSS
Trigger: AGAAGAAAAATTAATCCAGCAGGAACTGAGTAGTCT...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCATCTCTGTCACAAAGTaGTTTCCGAAACTTAATATG +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGIISVTK*FPKLNM
Trigger: CATATTAAGTTTCGGAAAGCACTTTGTGACAGAGAT...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAATCTCTGTCACAAAGTaGTTTCCGAAACTTAATATG +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRISVTK*FPKLNM
Trigger: CATATTAAGTTTCGGAAAGCACTTTGTGACAGAGAT...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp CACAGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCATCTCTGTCACAAAGTaGTTTCCGAAACTTAATATG +
Preference number: 4 (lower is better)
Translates to: HSIHCLNKPCIIRSIFLSISVTK*FPKLNM
Trigger: CATATTAAGTTTCGGAAAGCACTTTGTGACAGAGAT...GCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGEQIFQ*TWQPSQ
Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTTGGGAATATCAGGATaGATTACATCTCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNLGISG*ITSPPT
Trigger: AGTAGGAGGAGATGTAATGCATCCTGATATTCCCAA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCAAACAGCATCCAGGTTaGTCAGTCACCTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: KDMVNSWINLSTVLEECAKQHPG*SVTLKF
Trigger: AAATTTCAAGGTGACTGAGCAACCTGGATGCTGTTT...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTCACATCTCCTGCAATaGAAAAATAAAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNSHLLQ*KNKGWW
Trigger: CCACCAACCTTTATTTTTGCATTGCAGGAGATGTGA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTGTCTGAATAAACCATaGATTATCAGGAGCATATGT +
Preference number: 4 (lower is better)
Translates to: LNILYNPELKVRDTVLGICLNKP*IIRSIC
Trigger: ACATATGCTCCTGATAATGCATGGTTTATTCAGACA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558439.5
CDS-3UTR CCA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAATTAGGAGCAATGAGATaGAATTTGTATAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLFHHQNLPLVVSESYWELGAMR*NLYNAR
Trigger: TCTGGCATTATACAAATTCCATCTCATTGCTCCTAA...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGATTAGGAGCAATGAGATaGAATTTGTATAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRLGAMR*NLYNAR
Trigger: TCTGGCATTATACAAATTCCATCTCATTGCTCCTAA...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CCA 90 bp AGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCAGTTAGGAGCAATGAGATaGAATTTGTATAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: SIHCLNKPCIIRSIFLSQLGAMR*NLYNAR
Trigger: TCTGGCATTATACAAATTCCATCTCATTGCTCCTAA...CTGGCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CCA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: LIADLLFHHQNLPLVVSEIFQCT*QPSQVI
Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR TCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCGTTATTAGCAAACAATaGAGGTGTAGACAGACTACA +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGVISKQ*RCRQTT
Trigger: TGTAGTCTGTCTACACCTTCATTGTTTGCTAATAAC...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCATCTGCACACTATATTaGAAGCTTTTGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGICTLY*KLLVLS
Trigger: AGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGAT...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR TCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAATCTGCACACTATATTaGAAGCTTTTGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKICTLY*KLLVLS
Trigger: AGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGAT...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR GCA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATAGACTACTCAGTTCCTaGTGGATTAATTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHRLLSS*WINFSS
Trigger: AGAAGAAAAATTAATCCAGCAGGAACTGAGTAGTCT...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR GCA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGACTACTCAGTTCCTaGTGGATTAATTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LIADLLFHHQNLPLVVSERLLSS*WINFSS
Trigger: AGAAGAAAAATTAATCCAGCAGGAACTGAGTAGTCT...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR GCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTTTCATCACCAGTTTTaGTTTCCTTCTTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNFHHQF*FPSWED
Trigger: ATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR GCA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCAGGAGGAACCTATTATaGAAGAAATTCCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGRRNLL*KKFQSL
Trigger: AAGTGACTGGAATTTCTTGCATAATAGGTTCCTCCT...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CCA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKIFQCT*QPSQVI
Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
3UTR CAA 72 bp TCATTAGCAGTTTATAACATTAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTGTACAATCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: SLAVYNISLGHF*RDLNILYNPEL
Trigger: TAACTCAGGATTGTACAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCTAATGTTATAAACTGCTAATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
3UTR CAA 72 bp CTGCTTTTCTTTCTCCTCTTTAGATTGGGTAAGAACTaGAGATTGATCCTTTTTAGTTATAGCTTGATCTAC +
Preference number: 4 (lower is better)
Translates to: LLFFLLFRLGKN*RLILFSYSLIY
Trigger: GTAGATCAAGCTATAACTAAAAAGGATCAATCTCAAGTTCTTACCCAATCTAAAGAGGAGAAAGAAAAGCAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CCA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTTAGGAGCAATGAGATaGAATTTGTATAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNLGAMR*NLYNAR
Trigger: TCTGGCATTATACAAATTCCATCTCATTGCTCCTAA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS GCA 90 bp CCGCGATGCCGCCGCCGCCCGCGATCCCGTAGCCGCCCGGCTTCATaGCCGGCCGCCGCTGCCGGCCCGGCCTCCGTAGGCACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: PRCRRRPRSRSRPAS*PAAAAGPASVGTSC
Trigger: ACAGGAAGTGCCTACGGAGGCCGGGCCGGCAGCGGCGGCCGGGCATGAAGCCGGGCGGCTACGGGATCGCGGGCGGCGGCGGCATCGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS GCA 90 bp CAGCGTCTTCTCCACTATGTCGCTCATCGCCGCCGCCGCCCGCGATaGCGCCGCCGCCCGCGATCCCGTAGCCGCCCGGCTTCATGCCCG +
Preference number: 5 (lower is better)
Translates to: QRLLHYVAHRRRRPR*RRRPRSRSRPASCP
Trigger: CGGGCATGAAGCCGGGCGGCTACGGGATCGCGGGCGGCGGCGGCATCGCGGGCGGCGGCGGCGATGAGCGACATAGTGGAGAAGACGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS CCA 90 bp CTCGAGGAGAAGGACGCCTTGGCGGCCGCGGGCCCACCACCGGGCTaGTTCTGCAGAAAGAGTCCCGGCAGCGCCGTCAGCGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LEEKDALAAAGPPPG*FCRKSPGSAVSVFS
Trigger: GGAGAAGACGCTGACGGCGCTGCCGGGACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCAGAGGAGAAGGACGCCTaGGCGGCCGCGGGCCCACCA +
Preference number: 5 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPEEKDA*AAAGPP
Trigger: TGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTC...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTGAGGAGAAGGACGCCTaGGCGGCCGCGGGCCCACCA +
Preference number: 5 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCEEKDA*AAAGPP
Trigger: TGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTC...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAGAGGAGAAGGACGCCTaGGCGGCCGCGGGCCCACCA +
Preference number: 5 (lower is better)
Translates to: LIADLLFHHQNLPLVVSEEEKDA*AAAGPP
Trigger: TGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTC...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp AATGCAGTAAGCAGGGGATGGATGGGAGCAGCTGACAGGCCAATAGCCCTTCATGCCAGCTCTGCTATTTaGCCGACCAAATTGACGATG +
Preference number: 5 (lower is better)
Translates to: NAVSRGWMGAADRPIALHASSAI*PTKLTM
Trigger: CATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGC...ATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCCTGCTTACTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACGAGGAGAAGGACGCCTaGGCGGCCGCGGGCCCACCA +
Preference number: 5 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNEEKDA*AAAGPP
Trigger: TGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTC...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTTATTGTCATCTGGTGTaGAAGAGCCAGAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAYCHLV*KSQSRI
Trigger: GATCCTACTCTGGCTCTTCAACACCAGATGACAATA...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTCCCCCAGATTCACACTaGCTGCCATCTCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCPPDSH*LPSPFS
Trigger: TGAAAATGGAGATGGCAGCAAGTGTGAATCTGGGGG...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTGCAATGAGATGGAATTaGTATAATGCCAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTAAMRWN*YNARTA
Trigger: AGCTGTTCTGGCATTATACAAATTCCATCTCATTGC...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGCCAGCTCTGCTATTTaGCCGACCAAATTGACGATG +
Preference number: 5 (lower is better)
Translates to: LDGVKFSRASARIPPSPFASSAI*PTKLTM
Trigger: CATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCACTTTCATCACCAGTTTaGCTTTCCTTCTTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPLSSPV*LSFLGR
Trigger: TCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAG...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGCTAAAGAGCTTTCCTaGGCAACTGAGGCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: LDGVKFSRASARIPPSPFAKELS*ATEAAV
Trigger: TACTGCAGCCTCAGTTGCCAAGGAAAGCTCTTTAGC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCAGGTTGCTCAGTCACCTaGAAATTTTCTGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPGCSVT*KFSAGK
Trigger: TTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAACC...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp CCAGTGTCCACCACACCCCTGAAGTCAGCACACTCATTTCATCATGACACTGCTCTTTCCTCCAACTACTaGCTTCAAAATGGTTACAAA +
Preference number: 5 (lower is better)
Translates to: PVSTTPLKSAHSFHHDTALSSNY*LQNGYK
Trigger: TTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAG...AGCAGTGTCATGATGAAATGAGTGTGCTGACTTCAGGGGTGTGGTGGACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp GATACATCTGAACCAAGAGAAATGCCAGCAGGAGACTGTCGTCCAGTGAAGCCAATTTTGCCGACCAAATaGACGATGACATACTCTTCT +
Preference number: 5 (lower is better)
Translates to: DTSEPREMPAGDCRPVKPILPTK*TMTYSS
Trigger: AGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAAT...TGGCTTCACTGGACGACAGTCTCCTGCTGGCATTTCTCTTGGTTCAGATGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTCTTTCATCACCAGTTTaGCTTTCCTTCTTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCLSSPV*LSFLGR
Trigger: TCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAG...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTAATACATCTGCATGAACTCGGCAATGCAGTAAGCAGGGGATGGATGGGAGCATTTTGGGGATCTTTCTaGACCAGGAATCACAAAGAA +
Preference number: 5 (lower is better)
Translates to: LIHLHELGNAVSRGWMGAFWGSF*TRNHKE
Trigger: TTCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAA...TGCTCCCATCCATCCCCTGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACCAGAGTAGGATCCTGTaGGATAACATAGGTAAGAGC +
Preference number: 5 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDQSRIL*DNIGKS
Trigger: GCTCTTACCTATGTTATCCAACAGGATCCTACTCTG...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTTATTGTCATCTGGTGTaGAAGAGCCAGAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: SQLCYFADQIDDDILFFAYCHLV*KSQSRI
Trigger: GATCCTACTCTGGCTCTTCAACACCAGATGACAATA...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTATTTTGCCGACCAAATaGACGATGACATACTCTTCT +
Preference number: 5 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCILPTK*TMTYSS
Trigger: AGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAAT...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAGCCAGCTCTGCTATTTaGCCGACCAAATTGACGATG +
Preference number: 5 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLASSAI*PTKLTM
Trigger: CATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGC...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTCAATTAACCAGGCTTTaGTTTCTGAAGACACAGAGT +
Preference number: 5 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCQLTRL*FLKTQS
Trigger: ACTCTGTGTCTTCAGAAACAAAAGCCTGGTTAATTG...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCACTTTTCCTCCTGGCGTaGATGGGGAGGTTTGTAAGG +
Preference number: 5 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSLFLLA*MGRFVR
Trigger: CCTTACAAACCTCCCCATCAACGCCAGGAGGAAAAG...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACGCTTTTCCCAGCAGGTaGATTGTACTTTCTGATCCT +
Preference number: 5 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDAFPSR*IVLSDP
Trigger: AGGATCAGAAAGTACAATCAACCTGCTGGGAAAAGC...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTACATTCTCCATTATACTCTCTTGAGGAACAGGCAGAGCTCCACTTTCATCACGCTTTTCCCAGCAGGTaGATTGTACTTTCTGATCCT +
Preference number: 5 (lower is better)
Translates to: LHSPLYSLEEQAELHFHHAFPSR*IVLSDP
Trigger: AGGATCAGAAAGTACAATCAACCTGCTGGGAAAAGC...GTGATGAAAGTGGAGCTCTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTCAAACAGCATCCAGGTaGCTCAGTCACCTTGAAATT +
Preference number: 5 (lower is better)
Translates to: LDGVKFSRASARIPPSPFQTASR*LSHLEI
Trigger: AATTTCAAGGTGACTGAGCAACCTGGATGCTGTTTG...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACGTTAGGGATACAGTTTaGGGGATCTTTCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDVRDTV*GIFLDQ
Trigger: CTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAAC...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCAGCCAGCTCTGCTATTTaGCCGACCAAATTGACGATG +
Preference number: 5 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSASSAI*PTKLTM
Trigger: CATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGC...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAGCTAAAGAGCTTTCCTaGGCAACTGAGGCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRAKELS*ATEAAV
Trigger: TACTGCAGCCTCAGTTGCCAAGGAAAGCTCTTTAGC...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACGGTTGCTCAGTCACCTaGAAATTTTCTGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDGCSVT*KFSAGK
Trigger: TTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAACC...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTACCACTCATGAATACACCCTGTAACCAAGCAACAGATCTCCCTGGTAGCTGTGCCAATAGCCCTTCATaGCCTATAATCTCAATAATA +
Preference number: 5 (lower is better)
Translates to: LPLMNTPCNQATDLPGSCANSPS*PIISII
Trigger: TATTATTGAGATTATAGGCAATGAAGGGCTATTGGC...ACAGCTACCAGGGAGATCTGTTGCTTGGTTACAGGGTGTATTCATGAGTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS CCA 90 bp TCTATTAATGGAAGAACAGCTGGAATCATTTCGCAGGGGAAAATCTaGCTAACAACAGTCAGTGCCATACACACTTCTACTAGGTTAGTG +
Preference number: 5 (lower is better)
Translates to: SINGRTAGIISQGKI*LTTVSAIHTSTRLV
Trigger: CACTAACCTAGTAGAAGTGTGTATGGCACTGACTGTTGTTAGCCAGATTTTCCCCTGCGAAATGATTCCAGCTGTTCTTCCATTAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTGCAATGAGATGGAATTaGTATAATGCCAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: LDGVKFSRASARIPPSPFAMRWN*YNARTA
Trigger: AGCTGTTCTGGCATTATACAAATTCCATCTCATTGC...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAATATTGTCATCTGGTGTaGAAGAGCCAGAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: RLQYENFSTKGSSVSDSEYCHLV*KSQSRI
Trigger: GATCCTACTCTGGCTCTTCAACACCAGATGACAATA...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTCAATTAACCAGGCTTTaGTTTCTGAAGACACAGAGT +
Preference number: 5 (lower is better)
Translates to: SQLCYFADQIDDDILFFAQLTRL*FLKTQS
Trigger: ACTCTGTGTCTTCAGAAACAAAAGCCTGGTTAATTG...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACTTTTCCTCCTGGCGTaGATGGGGAGGTTTGTAAGG +
Preference number: 5 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKLFLLA*MGRFVR
Trigger: CCTTACAAACCTCCCCATCAACGCCAGGAGGAAAAG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp TTCAATTATTGTCATCTGGTGTTGAAGAGCCAGAGTAGGATCCTGTTGGATAACGCTTTTCCCAGCAGGTaGATTGTACTTTCTGATCCT +
Preference number: 5 (lower is better)
Translates to: FNYCHLVLKSQSRILLDNAFPSR*IVLSDP
Trigger: AGGATCAGAAAGTACAATCAACCTGCTGGGAAAAGC...GTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTACAAACAGCATCCAGGTaGCTCAGTCACCTTGAAATT +
Preference number: 5 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLQTASR*LSHLEI
Trigger: AATTTCAAGGTGACTGAGCAACCTGGATGCTGTTTG...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCGTTAGGGATACAGTTTaGGGGATCTTTCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSVRDTV*GIFLDQ
Trigger: CTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAAC...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCGTTAGGGATACAGTTTaGGGGATCTTTCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: GISGCITSPPTENTAFIVVRDTV*GIFLDQ
Trigger: CTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAAC...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAAGCATCTTACACCTATaGCTTCACACTCGACCTAGC +
Preference number: 5 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRSILHL*LHTRPS
Trigger: GCTAGGTCGAGTGTGAAGCAATAGGTGTAAGATGCT...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS GCA 90 bp TATATGCAAGGAGGCAGCCATGACCCCAACATCTCTGTCACAAAGTaGTTTCCGAAACTTAATATGAATATGTTGTACTTGATTAGGAGC +
Preference number: 5 (lower is better)
Translates to: YMQGGSHDPNISVTK*FPKLNMNMLYLIRS
Trigger: GCTCCTAATCAAGTACAACATATTCATATTAAGTTTCGGAAAGCACTTTGTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTTTTCTTCTTCGTGCTaGGAGGTGAGGGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNFSSSC*EVRAVM
Trigger: CATCACAGCCCTCACCTCCAAGCACGAAGAAGAAAA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TTTGCGAAGGATAACCAGAGTTTCCCAAAGTCGTCACTTGAGATTTTTAATGGTCAGAGTAGGATCCTGTaGGATAACATAGGTAAGAGC +
Preference number: 5 (lower is better)
Translates to: FAKDNQSFPKSSLEIFNGQSRIL*DNIGKS
Trigger: GCTCTTACCTATGTTATCCAACAGGATCCTACTCTG...ACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCACAGAGTAGGATCCTGTaGGATAACATAGGTAAGAGC +
Preference number: 5 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSQSRIL*DNIGKS
Trigger: GCTCTTACCTATGTTATCCAACAGGATCCTACTCTG...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAATATTGTCATCTGGTGTaGAAGAGCCAGAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEYCHLV*KSQSRI
Trigger: GATCCTACTCTGGCTCTTCAACACCAGATGACAATA...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACGCCAGCTCTGCTATTTaGCCGACCAAATTGACGATG +
Preference number: 5 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNASSAI*PTKLTM
Trigger: CATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGC...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTTACCCAACTCATAACTaGAAGAAATCTCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: SQLCYFADQIDDDILFFAYPTHN*KKSLWI
Trigger: TATCCACAGAGATTTCTTCAAGTTATGAGTTGGGTA...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AGCCAGCTCTGCTATTTTGCCGACCAAATTGACGATGACATACTCTTCTTTGCTTTTCTCCTCTTTAGATaGGGTAAGAACTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: SQLCYFADQIDDDILFFAFLLFR*GKNLRL
Trigger: CAATCTCAAGTTCTTACCCAATCTAAAGAGGAGAAA...AGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGAGCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAAGCTAAAGAGCTTTCCTaGGCAACTGAGGCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKAKELS*ATEAAV
Trigger: TACTGCAGCCTCAGTTGCCAAGGAAAGCTCTTTAGC...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCGCTAAAGAGCTTTCCTaGGCAACTGAGGCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGAKELS*ATEAAV
Trigger: TACTGCAGCCTCAGTTGCCAAGGAAAGCTCTTTAGC...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAGGTTGCTCAGTCACCTaGAAATTTTCTGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLGCSVT*KFSAGK
Trigger: TTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAACC...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TTCAATTATTGTCATCTGGTGTTGAAGAGCCAGAGTAGGATCCTGTTGGATAACGGTTGCTCAGTCACCTaGAAATTTTCTGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: FNYCHLVLKSQSRILLDNGCSVT*KFSAGK
Trigger: TTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAACC...GTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGACAAACAGCATCCAGGTaGCTCAGTCACCTTGAAATT +
Preference number: 5 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRQTASR*LSHLEI
Trigger: AATTTCAAGGTGACTGAGCAACCTGGATGCTGTTTG...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp AAAATCATGCTCCCAGCCCTAAATCTACCATTACATGTCTCCCACCCATTAGACTATCTGCACACTATATaGAAAGCTTTTGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: KIMLPALNLPLHVSHPLDYLHTI*KAFGAF
Trigger: GAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATA...GTCTAATGGGTGGGAGACATGTAATGGTAGATTTAGGGCTGGGAGCATGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTTGATGGAGTAAAATTTAGCAGGGCTTCTGCTAGGATCCCTCCATCACCTTTTTATCTGCACACTATATaGAAAGCTTTTGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LDGVKFSRASARIPPSPFYLHTI*KAFGAF
Trigger: GAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATA...AAAAGGTGATGGAGGGATCCTAGCAGAAGCCCTGCTAAATTTTACTCCATCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAGTTAGGGATACAGTTTaGGGGATCTTTCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRVRDTV*GIFLDQ
Trigger: CTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAAC...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp AGACTACAATATGAGAATTTCTCAACCAAGGGCAGTTCTGTGAGTGACTCAGAAAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTG +
Preference number: 5 (lower is better)
Translates to: RLQYENFSTKGSSVSDSESLGHF*RDLNIL
Trigger: CAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCT...TTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCGCAATGAGATGGAATTaGTATAATGCCAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: GISGCITSPPTENTAFIVAMRWN*YNARTA
Trigger: AGCTGTTCTGGCATTATACAAATTCCATCTCATTGC...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKNFPMH*AAFSSN
Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTAATTTTGCCGACCAAATaGACGATGACATACTCTTCT +
Preference number: 5 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLILPTK*TMTYSS
Trigger: AGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAAT...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp GGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCATTGTCCAATTAACCAGGCTTTaGTTTCTGAAGACACAGAGT +
Preference number: 5 (lower is better)
Translates to: GISGCITSPPTENTAFIVQLTRL*FLKTQS
Trigger: ACTCTGTGTCTTCAGAAACAAAAGCCTGGTTAATTG...GACAATGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTG +
Preference number: 5 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRSLGHF*RDLNIL
Trigger: CAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCT...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACAGCATCTTACACCTATaGCTTCACACTCGACCTAGC +
Preference number: 5 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNSILHL*LHTRPS
Trigger: GCTAGGTCGAGTGTGAAGCAATAGGTGTAAGATGCT...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGAGCAATGAGATGGAATTaGTATAATGCCAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRAMRWN*YNARTA
Trigger: AGCTGTTCTGGCATTATACAAATTCCATCTCATTGC...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAAAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: LLFHHQNLPLVVSESYWENFPMH*AAFSSN
Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTATTGTCATCTGGTGTaGAAGAGCCAGAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGYCHLV*KSQSRI
Trigger: GATCCTACTCTGGCTCTTCAACACCAGATGACAATA...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAGTTATTGGGAAATTTTGCCGACCAAATaGACGATGACATACTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLFHHQNLPLVVSESYWEILPTK*TMTYSS
Trigger: AGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAAT...TTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATCTTTCATCACCAGTTTaGCTTTCCTTCTTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHLSSPV*LSFLGR
Trigger: TCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAG...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTATTTCTCCTCTTTAGATaGGGTAAGAACTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLFLLFR*GKNLRL
Trigger: CAATCTCAAGTTCTTACCCAATCTAAAGAGGAGAAA...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CAAAACCATCCAGAAAAGATAAAGAAGCATCTACCACCAAGTCTTCACAACTCCTTTCTCCTCTTTAGATaGGGTAAGAACTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: QNHPEKIKKHLPPSLHNSFLLFR*GKNLRL
Trigger: CAATCTCAAGTTCTTACCCAATCTAAAGAGGAGAAA...GGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCGCTTTTCCCAGCAGGTaGATTGTACTTTCTGATCCT +
Preference number: 5 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGAFPSR*IVLSDP
Trigger: AGGATCAGAAAGTACAATCAACCTGCTGGGAAAAGC...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAACAAACAGCATCCAGGTaGCTCAGTCACCTTGAAATT +
Preference number: 5 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKQTASR*LSHLEI
Trigger: AATTTCAAGGTGACTGAGCAACCTGGATGCTGTTTG...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp TTCAATTATTGTCATCTGGTGTTGAAGAGCCAGAGTAGGATCCTGTTGGATAACTTTGTTTCACATCATTaGCGAAGGATAACCAGAGTT +
Preference number: 5 (lower is better)
Translates to: FNYCHLVLKSQSRILLDNFVSHH*RRITRV
Trigger: AACTCTGGTTATCCTTCGCAAATGATGTGAAACAAA...GTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AAAATAATGCTCCTCTACAGGACACATGCTGTGCTTGGTATACTTGGCACATTATTTGTTTCACATCATTaGCGAAGGATAACCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KIMLLYRTHAVLGILGTLFVSHH*RRITRV
Trigger: AACTCTGGTTATCCTTCGCAAATGATGTGAAACAAA...TAATGTGCCAAGTATACCAAGCACAGCATGTGTCCTGTAGAGGAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TCATTTCATCATGACACTGCTGAGAGCCTGGGGATGAATCTGATCTATTCAAAAGCCAATAGCCCTTCATaGCCTATAATCTCAATAATA +
Preference number: 5 (lower is better)
Translates to: SFHHDTAESLGMNLIYSKANSPS*PIISII
Trigger: TATTATTGAGATTATAGGCAATGAAGGGCTATTGGC...TTTTGAATAGATCAGATTCATCCCCAGGCTCTCAGCAGTGTCATGATGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTG +
Preference number: 5 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHSLGHF*RDLNIL
Trigger: CAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCT...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATGCAATGAGATGGAATTaGTATAATGCCAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHAMRWN*YNARTA
Trigger: AGCTGTTCTGGCATTATACAAATTCCATCTCATTGC...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGACTTTCCTCCAACTACTaGCTTCAAAATGGTTACAAA +
Preference number: 5 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRLSSNY*LQNGYK
Trigger: TTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAG...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp CACAGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCCTTTCCTCCAACTACTaGCTTCAAAATGGTTACAAA +
Preference number: 5 (lower is better)
Translates to: HSIHCLNKPCIIRSIFLSLSSNY*LQNGYK
Trigger: TTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAG...GCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAAAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: LIADLLFHHQNLPLVVSENFPMH*AAFSSN
Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTACCCAACTCATAACTaGAAGAAATCTCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: LNILYNPELKVRDTVLGIYPTHN*KKSLWI
Trigger: TATCCACAGAGATTTCTTCAAGTTATGAGTTGGGTA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCCTTTCATCACCAGTTTaGCTTTCCTTCTTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGLSSPV*LSFLGR
Trigger: TCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAG...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTATCTGCACACTATATaGAAAGCTTTTGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LNILYNPELKVRDTVLGIYLHTI*KAFGAF
Trigger: GAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp TTAAAGGTTAGGGATACAGTTTTGGGGATCTTTCTTGACCAGGAATCACAAAGATATCTGCACACTATATaGAAAGCTTTTGGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LKVRDTVLGIFLDQESQRYLHTI*KAFGAF
Trigger: GAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATA...TCTTTGTGATTCCTGGTCAAGAAAGATCCCCAAAACTGTATCCCTAACCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp CTAAACATACTGTACAATCCTGAGTTAAAGGTTAGGGATACAGTTTTGGGGATCTTTGTTTCACATCATTaGCGAAGGATAACCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LNILYNPELKVRDTVLGIFVSHH*RRITRV
Trigger: AACTCTGGTTATCCTTCGCAAATGATGTGAAACAAA...GATCCCCAAAACTGTATCCCTAACCTTTAACTCAGGATTGTACAGTATGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp TATTGGGAATATCAGGATGCATTACATCTCCTCCTACTGAAAACACAGCATTCAGCCAATAGCCCTTCATaGCCTATAATCTCAATAATA +
Preference number: 5 (lower is better)
Translates to: YWEYQDALHLLLLKTQHSANSPS*PIISII
Trigger: TATTATTGAGATTATAGGCAATGAAGGGCTATTGGC...TGAATGCTGTGTTTTCAGTAGGAGGAGATGTAATGCATCCTGATATTCCCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp CACAGCATTCATTGTCTGAATAAACCATGCATTATCAGGAGCATATTTCTCAGCGCCAATAGCCCTTCATaGCCTATAATCTCAATAATA +
Preference number: 5 (lower is better)
Translates to: HSIHCLNKPCIIRSIFLSANSPS*PIISII
Trigger: TATTATTGAGATTATAGGCAATGAAGGGCTATTGGC...GCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561393.5
CDS-3UTR CAA 90 bp CTATTTCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCAGCTTAGGTCACTTTTaGAGGGACCTAAACATACTG +
Preference number: 5 (lower is better)
Translates to: LFQLMYNLKVLVHHSYIGSLGHF*RDLNIL
Trigger: CAGTATGTTTAGGTCCCTCAAAAAGTGACCTAAGCT...GCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp TTAATTGCTGATCTTCTGTTTCATCATCAAAACCTTCCGCTAGTAGTCTCAGAACTTTCCTCCAACTACTaGCTTCAAAATGGTTACAAA +
Preference number: 5 (lower is better)
Translates to: LIADLLFHHQNLPLVVSELSSNY*LQNGYK
Trigger: TTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAG...TTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGATCAGCAATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000558439.5
ENST00000561393.5
ENST00000561441.5
CDS-3UTR CAA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNNFPMH*AAFSSN
Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp AAAGATATGGTAAATTCATGGATTAATCTCTCAACTGTATTAGAAGAGTGCGCCAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: KDMVNSWINLSTVLEECANFPMH*AAFSSN
Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...GGCGCACTCTTCTAATACAGTTGAGAGATTAATCCATGAATTTACCATATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACCAATTAACCAGGCTTTaGTTTCTGAAGACACAGAGT +
Preference number: 5 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNQLTRL*FLKTQS
Trigger: ACTCTGTGTCTTCAGAAACAAAAGCCTGGTTAATTG...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS-3UTR CAA 90 bp AGGTTTTTCTATCTGCACACTATATTGAAAGCTTTTGGTGCTTTCTGCTTCCATTTTGTTTCACATCATTaGCGAAGGATAACCAGAGTT +
Preference number: 5 (lower is better)
Translates to: RFFYLHTILKAFGAFCFHFVSHH*RRITRV
Trigger: AACTCTGGTTATCCTTCGCAAATGATGTGAAACAAA...ATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558439.5
ENST00000561393.5
CDS-3UTR CAA 90 bp TTCATGTCTCCCTTCCATTTAATGCAGAAAACTGAGACTTGGCTTTATTACAAATACCCAACTCATAACTaGAAGAAATCTCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: FMSPFHLMQKTETWLYYKYPTHN*KKSLWI
Trigger: TATCCACAGAGATTTCTTCAAGTTATGAGTTGGGTA...TTTGTAATAAAGCCAAGTCTCAGTTTTCTGCATTAAATGGAAGGGAGACATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
CDS-3UTR CAA 90 bp TCAGTTAATGTACAACCTCAAGGTTTTGGTCCATCATTCATATATAGGCTTAACTTTCTCCTCTTTAGATaGGGTAAGAACTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: SVNVQPQGFGPSFIYRLNFLLFR*GKNLRL
Trigger: CAATCTCAAGTTCTTACCCAATCTAAAGAGGAGAAA...GTTAAGCCTATATATGAATGATGGACCAAAACCTTGAGGTTGTACATTAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261842.10
ENST00000560508.1
CDS CAA 72 bp CGGACAAGGCTGCCCAGCCTCGAGGAGAAGGACGCCTaGGCGGCCGCGGGCCCACCACCGGGCTGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: RTRLPSLEEKDA*AAAGPPPGWFC
Trigger: GCAGAACCAGCCCGGTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTCGAGGCTGGGCAGCCTTGTCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS CCA 72 bp AAGGACGCCTTGGCGGCCGCGGGCCCACCACCGGGCTaGTTCTGCAGAAAGAGTCCCGGCAGCGCCGTCAGC +
Preference number: 6 (lower is better)
Translates to: KDALAAAGPPPG*FCRKSPGSAVS
Trigger: GCTGACGGCGCTGCCGGGACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCCCGCGGCCGCCAAGGCGTCCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS CCA 72 bp GGACAAGGCTGCCCAGCCTCGAGGAGAAGGACGCCTTaGCGGCCGCGGGCCCACCACCGGGCTGGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: GQGCPASRRRTP*RPRAHHRAGSA
Trigger: TGCAGAACCAGCCCGGTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTCGAGGCTGGGCAGCCTTGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS CAA 90 bp GTGATGCCGCGGACAAGGCTGCCCAGCCTCGAGGAGAAGGACGCCTaGGCGGCCGCGGGCCCACCACCGGGCTGGTTCTGCAGAAAGAGT +
Preference number: 6 (lower is better)
Translates to: VMPRTRLPSLEEKDA*AAAGPPPGWFCRKS
Trigger: ACTCTTTCTGCAGAACCAGCCCGGTGGTGGGCCCGCGGCCGCCAAGGCGTCCTTCTCCTCGAGGCTGGGCAGCCTTGTCCGCGGCATCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS CCA 72 bp GGAAGAACAGCTGGAATCATTTCGCAGGGGAAAATCTaGCTAACAACAGTCAGTGCCATACACACTTCTACT +
Preference number: 6 (lower is better)
Translates to: GRTAGIISQGKI*LTTVSAIHTST
Trigger: AGTAGAAGTGTGTATGGCACTGACTGTTGTTAGCCAGATTTTCCCCTGCGAAATGATTCCAGCTGTTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS CCA 72 bp CCATGGTGCTGGCACACTGTGGTAATTGAATTCTACTaGGAGCTTTCCTCCAACTACTTGCTTCAAAATGGT +
Preference number: 6 (lower is better)
Translates to: PWCWHTVVIEFY*ELSSNYLLQNG
Trigger: ACCATTTTGAAGCAAGTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTACCACAGTGTGCCAGCACCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS TCA 72 bp GAATTTGTAACCATGGTGCTGGCACACTGTGGTAATTaGATTCTACTGGGAGCTTTCCTCCAACTACTTGCT +
Preference number: 6 (lower is better)
Translates to: EFVTMVLAHCGN*ILLGAFLQLLA
Trigger: AGCAAGTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTACCACAGTGTGCCAGCACCATGGTTACAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS CAA 90 bp CACACTGTGGTAATTGAATTCTACTGGGAGCTTTCCTCCAACTACTaGCTTCAAAATGGTTACAAAACTCCCAGTCAAGTCTTTATATCC +
Preference number: 6 (lower is better)
Translates to: HTVVIEFYWELSSNY*LQNGYKTPSQVFIS
Trigger: GGATATAAAGACTTGACTGGGAGTTTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTACCACAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5
CDS CAA 72 bp GTAATTGAATTCTACTGGGAGCTTTCCTCCAACTACTaGCTTCAAAATGGTTACAAAACTCCCAGTCAAGTC +
Preference number: 6 (lower is better)
Translates to: VIEFYWELSSNY*LQNGYKTPSQV
Trigger: GACTTGACTGGGAGTTTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAGCTCCCAGTAGAATTCAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261842.10
ENST00000558439.5
ENST00000560508.1
ENST00000561393.5
ENST00000561441.5