RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP4B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134262

Ensembl transcript IDs: ENST00000256658.8, ENST00000369564.5, ENST00000369567.5, ENST00000369569.6, ENST00000369571.2, ENST00000432415.5, ENST00000460653.1, ENST00000462591.1, ENST00000472122.1, ENST00000479285.5, ENST00000479801.1, ENST00000484201.5, ENST00000489092.5, ENST00000489499.5

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGACAAGCAACAAGAAAACAATTACAATACTACTGCTAGAGGTATaGTCTGGCTACTTTGATAGCTTGAGGGAGGCCCCTAATGAAGGC +
Preference number: 1 (lower is better)
Translates to: RTSNKKTITILLLEV*SGYFDSLREAPNEG
Trigger: GCCTTCATTAGGGGCCTCCCTCAAGCTATCAAAGTAGCCAGAGCATACCTCTAGCAGTAGTATTGTAATTGTTTTCTTGTTGCTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR TCA 90 bp GTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTaGCACCAAAGAGGTACTTTAGATGACATTAAGGACTTTGGAATC +
Preference number: 1 (lower is better)
Translates to: VCFCQKRSHFGSGKT*HQRGTLDDIKDFGI
Trigger: GATTCCAAAGTCCTTAATGTCATCTAAAGTACCTCTTTGGTGTCAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR CCA 90 bp CATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATaGGGTCAATTGCCAATAGGAATGAAAGGAATGAATCAATGTTCT +
Preference number: 1 (lower is better)
Translates to: HLLTNINLYNIITEK*GQLPIGMKGMNQCS
Trigger: AGAACATTGATTCATTCCTTTCATTCCTATTGGCAATTGACCCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
3UTR-3UTR TCA 90 bp GAGGACAAGCAACAAGAAAACAATTACAATACTACTGCTAGAGGTATGCTCTGGCCAGGGAAGAAAAGATaGCCCCCACAAATGATGACC +
Preference number: 2 (lower is better)
Translates to: EDKQQENNYNTTARGMLWPGKKR*PPQMMT
Trigger: GGTCATCATTTGTGGGGGTCATCTTTTCTTCCCTGG...CCAGAGCATACCTCTAGCAGTAGTATTGTAATTGTTTTCTTGTTGCTTGTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR-3UTR TCA 90 bp AAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGCTACAACATCATCACTaGAAAATGGGGTCAATTGCC +
Preference number: 2 (lower is better)
Translates to: KGNCNANGLLLPEKKSFWLQHHH*KMGSIA
Trigger: GGCAATTGACCCCATTTTTCAGTGATGATGTTGTAG...CCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR-3UTR TCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAACTCTCCTTTGTATCTaGTATTATCTGGACTTACTG +
Preference number: 2 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSTLLCI*YYLDLL
Trigger: CAGTAAGTCCAGATAATATCAGATACAAAGGAGAGT...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
3UTR-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATaGGGTCAATTGCCAATAGGA +
Preference number: 2 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNIITEK*GQLPIG
Trigger: TCCTATTGGCAATTGACCCCATTTTTCAGTGATGAT...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
3UTR-3UTR TCA 90 bp AATTCAAGAAGATATGAGGGTGAGAAAATGTTCCAGGCAATAAATAAAAGCAGGACTCTCCTTTGTATCTaGTATTATCTGGACTTACTG +
Preference number: 2 (lower is better)
Translates to: NSRRYEGEKMFQAINKSRTLLCI*YYLDLL
Trigger: CAGTAAGTCCAGATAATATCAGATACAAAGGAGAGT...CCTGCTTTTATTTATTGCCTGGAACATTTTCTCACCCTCATATCTTCTTGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR-3UTR TCA 90 bp AATTCAAGAAGATATGAGGGTGAGAAAATGTTCCAGGCAATAAATAAAAGCAGGAAGTTAACACAGAGGTaGAAGAAGCAGGTGTATAAA +
Preference number: 2 (lower is better)
Translates to: NSRRYEGEKMFQAINKSRKLTQR*KKQVYK
Trigger: TTTATACACCTGCTTCTTTCACCTCTGTGTTAACTT...CCTGCTTTTATTTATTGCCTGGAACATTTTCTCACCCTCATATCTTCTTGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR GCA 72 bp AGCAGGTGTATAAAGGGAACTGCAATGCAAATGGTTTaGTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGC +
Preference number: 3 (lower is better)
Translates to: SRCIKGTAMQMV*FCQKRSHFGSG
Trigger: GCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTATACACCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR GCA 72 bp AACAAGAAAACAATTACAATACTACTGCTAGAGGTATaGTCTGGCTACTTTGATAGCTTGAGGGAGGCCCCT +
Preference number: 3 (lower is better)
Translates to: NKKTITILLLEV*SGYFDSLREAP
Trigger: AGGGGCCTCCCTCAAGCTATCAAAGTAGCCAGAGCATACCTCTAGCAGTAGTATTGTAATTGTTTTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR CCA 72 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTaGGAGTGGCAAGACTTGACACCAAAGAGGTACTTT +
Preference number: 3 (lower is better)
Translates to: ANGLLLPEKKSF*EWQDLTPKRYF
Trigger: AAAGTACCTCTTTGGTGTCAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR-3UTR CAA 90 bp CTAATGAAGGCAGTGAGGGTTAAAGGAAACTTCCTGAAGGAGCTTATGAGTGAGGAAAAATGGGGTCAATaGCCAATAGGAATGAAAGGA +
Preference number: 3 (lower is better)
Translates to: LMKAVRVKGNFLKELMSEEKWGQ*PIGMKG
Trigger: TCCTTTCATTCCTATTGGCAATTGACCCCATTTTTC...CTCACTCATAAGCTCCTTCAGGAAGTTTCCTTTAACCCTCACTGCCTTCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR TCA 72 bp TGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTaGCACCAAAGAGGTACTTTAGATGACATTAAGGAC +
Preference number: 3 (lower is better)
Translates to: CQKRSHFGSGKT*HQRGTLDDIKD
Trigger: GTCCTTAATGTCATCTAAAGTACCTCTTTGGTGTCAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR CCA 72 bp ACCAACATTAACCTCTACAACATCATCACTGAAAAATaGGGTCAATTGCCAATAGGAATGAAAGGAATGAAT +
Preference number: 3 (lower is better)
Translates to: TNINLYNIITEK*GQLPIGMKGMN
Trigger: ATTCATTCCTTTCATTCCTATTGGCAATTGACCCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGAGCGCCGCGTCCGACTaGCCGCAGACCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGSAASD*PQTPPS
Trigger: AGAGGGAGGGGTCTGCGGTCAGTCGGACGCGGCGCT...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256658.8
CDS-3UTR TCA 90 bp GAGGTATGCTCTGGCTACTTTGATAGCTTGAGGGAGGCCCCTAATGAAGGCAGTCTGGCACCAGTGTGTTaGAGTCTGAGGCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: EVCSGYFDSLREAPNEGSLAPVC*SLRPSY
Trigger: ATAGCTGGGCCTCAGACTTCAACACACTGGTGCCAG...ACTGCCTTCATTAGGGGCCTCCCTCAAGCTATCAAAGTAGCCAGAGCATACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGGGCTCCTTCTCGTCCTaGTGTGGGAGCCGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRGSFSS*CGSRRP
Trigger: CGGCCGACGGCTCCCACATCAGGACGAGAAGGAGCC...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256658.8
CDS-3UTR TCA 90 bp GAAAGAAGCAGGTGTATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGCAGCCGGGCAGGGCCTaGCATACAGCTTCAGTACAC +
Preference number: 4 (lower is better)
Translates to: ERSRCIKGTAMQMVCFCQQPGRA*HTASVH
Trigger: GTGTACTGAAGCTGTATGTCAGGCCCTGCCCGGCTG...CTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTATACACCTGCTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp GAGGTATGCTCTGGCTACTTTGATAGCTTGAGGGAGGCCCCTAATGAAGGCAGTGCTACTTTGATAGCTTaGGGGAGGCCCCTAATGAAG +
Preference number: 4 (lower is better)
Translates to: EVCSGYFDSLREAPNEGSATLIA*GRPLMK
Trigger: CTTCATTAGGGGCCTCCCTCAAGCTATCAAAGTAGC...ACTGCCTTCATTAGGGGCCTCCCTCAAGCTATCAAAGTAGCCAGAGCATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp GAGGTATGCTCTGGCTACTTTGATAGCTTGAGGGAGGCCCCTAATGAAGGCAGTAAAGATGGCAGCCTGTaGAAAGTCCGCAGACACATC +
Preference number: 4 (lower is better)
Translates to: EVCSGYFDSLREAPNEGSKDGSL*KVRRHI
Trigger: GATGTGTCTGCGGACTTTGCACAGGCTGCCATCTTT...ACTGCCTTCATTAGGGGCCTCCCTCAAGCTATCAAAGTAGCCAGAGCATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp GAGGTATGCTCTGGCTACTTTGATAGCTTGAGGGAGGCCCCTAATGAAGGCAGTTCAGCCTGGCCCCATTaGTCCAGTTTTGACATTCGA +
Preference number: 4 (lower is better)
Translates to: EVCSGYFDSLREAPNEGSSAWPH*SSFDIR
Trigger: TCGAATGTCAAAACTGGACCAATGGGGCCAGGCTGA...ACTGCCTTCATTAGGGGCCTCCCTCAAGCTATCAAAGTAGCCAGAGCATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGCGTCCTAGCATGTCCTaGCACTCAGCAGGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLRPSMS*HSAGRE
Trigger: CTCCCGACCTGCTGAGTGCCAGGACATGCTAGGACG...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCCAGCCGGGCAGGGCCTaGCATACAGCTTCAGTACAC +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIQPGRA*HTASVH
Trigger: GTGTACTGAAGCTGTATGTCAGGCCCTGCCCGGCTG...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp GAGGTATGCTCTGGCTACTTTGATAGCTTGAGGGAGGCCCCTAATGAAGGCAGTTTCCCCTCACTATCTTaGATGTTCTCTTCACAGCCG +
Preference number: 4 (lower is better)
Translates to: EVCSGYFDSLREAPNEGSFPSLS*MFSSQP
Trigger: CGGCTGTGAAGAGAACATTCAAGATAGTGAGGGGAA...ACTGCCTTCATTAGGGGCCTCCCTCAAGCTATCAAAGTAGCCAGAGCATACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGCAGCCGGGCAGGGCCTaGCATACAGCTTCAGTACAC +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRQPGRA*HTASVH
Trigger: GTGTACTGAAGCTGTATGTCAGGCCCTGCCCGGCTG...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAGATTGGGGACTAGCATaGGGGCTCCAGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQCKWFASARKEVILGVADWGLA*GLQNQG
Trigger: TCCCTGATTCTGGAGCCCTCATGCTAGTCCCCAATC...TGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp GAGGTATGCTCTGGCTACTTTGATAGCTTGAGGGAGGCCCCTAATGAAGGCAGTCTACTGCTAGAGGTATaGTCTGGCTACTTTGATAGC +
Preference number: 4 (lower is better)
Translates to: EVCSGYFDSLREAPNEGSLLLEV*SGYFDS
Trigger: GCTATCAAAGTAGCCAGAGCATACCTCTAGCAGTAG...ACTGCCTTCATTAGGGGCCTCCCTCAAGCTATCAAAGTAGCCAGAGCATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATCTTCTCGTCCTGATGTaGGAGCCGTCGGCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNLLVLM*EPSAGR
Trigger: CCTGCCGGCCGACGGCTCCCACATCAGGACGAGAAG...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256658.8
CDS-3UTR CCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACGTCCTAGCATGTCCTaGCACTCAGCAGGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSRPSMS*HSAGRE
Trigger: CTCCCGACCTGCTGAGTGCCAGGACATGCTAGGACG...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACCGTCCTAGCATGTCCTaGCACTCAGCAGGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNRPSMS*HSAGRE
Trigger: CTCCCGACCTGCTGAGTGCCAGGACATGCTAGGACG...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp GAAAGAAGCAGGTGTATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGGAGGTATGCTTTCCATaGCCGAGACCCAGCCCTACT +
Preference number: 4 (lower is better)
Translates to: ERSRCIKGTAMQMVCFCQEVCFP*PRPSPT
Trigger: AGTAGGGCTGGGTCTCGGCCATGGAAAGCATACCTC...CTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTATACACCTGCTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGCATTGGATTGGGGTCTaGGCAGTCTTTGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLHWIGV*AVFAQR
Trigger: ACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATG...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp ATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTCTAGCAAAGGTCCCTTaGCCCGCACAAGGACATCAG +
Preference number: 4 (lower is better)
Translates to: MQMVCFCQKRSHFGSGKTLAKVP*PAQGHQ
Trigger: CTGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAG...AGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCCTGGCACCAGTGTGTTaGAGTCTGAGGCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIILAPVC*SLRPSY
Trigger: ATAGCTGGGCCTCAGACTTCAACACACTGGTGCCAG...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCCGCAGACACATCCGTaGAGTACCCTCGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGPQTHP*STLEAP
Trigger: AGGAGCTTCGAGGGTACTGCACGGATGTGTCTGCGG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp TGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGACACCACCACTGTGGTAATGTaGTCTTGTCGAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: WFASARKEVILGVARLDTTTVVM*SCRRPS
Trigger: GCTGGGTCTTCGACAAGAGCACATTACCACAGTGGT...GGTGTCAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGTCCCATCACCACACCTaGGCTACTGCTCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLSHHHT*ATALEE
Trigger: TTCCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGA...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGGAGATAGTTGCCCAGTaGGCTTTGCCATACACTGGC +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLEIVAQ*ALPYTG
Trigger: GCCAGTGTATGGCAAAGCCCACTGGGCAACTATCTC...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGTGGAGGGTGTCAGGATaGAATTCTCCCCGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGWRVSG*NSPRQG
Trigger: GCCTTGGCGGGGAGAATTCCATCCTGACACCCTCCA...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCGGACTGCCACTCTCCTaGCATATGAAGCCTTATCCC +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIGLPLS*HMKPYP
Trigger: GGGATAAGGCTTCATATGTCAGGAGAGTGGCAGTCC...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR TCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACCTAGCAAAGGTCCCTTaGCCCGCACAAGGACATCAG +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNLAKVP*PAQGHQ
Trigger: CTGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAG...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGGCACCAGTGTGTTaGAGTCTGAGGCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSLAPVC*SLRPSY
Trigger: ATAGCTGGGCCTCAGACTTCAACACACTGGTGCCAG...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGGATTGGGGACTAGCATaGGGGCTCCAGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRDWGLA*GLQNQG
Trigger: TCCCTGATTCTGGAGCCCTCATGCTAGTCCCCAATC...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCACCAGGGAAGAAAAGATaGCCCCCACAAATGATGACC +
Preference number: 4 (lower is better)
Translates to: LQCKWFASARKEVILGVAPGKKR*PPQMMT
Trigger: GGTCATCATTTGTGGGGGTCATCTTTTCTTCCCTGG...TGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp GAAAGAAGCAGGTGTATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGTCCTCTAGCACCTGCTaGACATTCTCATCGTTCACC +
Preference number: 4 (lower is better)
Translates to: ERSRCIKGTAMQMVCFCQSSSTC*TFSSFT
Trigger: GGTGAACGATGAGAATGTGCAGCAGGTGCTAGAGGA...CTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTATACACCTGCTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATCCGCAGACACATCCGTaGAGTACCCTCGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNPQTHP*STLEAP
Trigger: AGGAGCTTCGAGGGTACTGCACGGATGTGTCTGCGG...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGAGGTCTCGGAAAGTCTaGACCACCACTGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLRSRKV*TTTVVM
Trigger: CATTACCACAGTGGTGGTGCAGACTTTCCGAGACCT...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGTTGCCCAGTGGGCTTTaGCATACACTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGLPSGL*HTLAPV
Trigger: CACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAA...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACTTGCCCAGTGGGCTTTaGCATACACTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNLPSGL*HTLAPV
Trigger: CACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAA...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCTGAGCACTGAGGTATaGTTTCCATGGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGLSTEV*FPWPRP
Trigger: GGGTCTCGGCCATGGAAAGCATACCTCAGTGCTCAG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCCTCGCACCATTGGATTaGGGTCTGAGCAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIILAPLD*GLSSLC
Trigger: GCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAG...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCTCCCATCACCACACCTaGGCTACTGCTCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIISHHHT*ATALEE
Trigger: TTCCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGA...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCCAACGCTCTGCCCCCTaGCATTTAGAGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIQRSAP*HLEIVA
Trigger: GGCAACTATCTCTAAATGCCAGGGGGCAGAGCGTTG...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTCAACGCTCTGCCCCCTaGCATTTAGAGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: MQMVCFCQKRSHFGSGKTQRSAP*HLEIVA
Trigger: GGCAACTATCTCTAAATGCCAGGGGGCAGAGCGTTG...AGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGTGGAGGGTGTCAGGATaGAATTCTCCCCGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWWRVSG*NSPRQG
Trigger: GCCTTGGCGGGGAGAATTCCATCCTGACACCCTCCA...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACGAGGTATGCTTTCCATaGCCGAGACCCAGCCCTACT +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNEVCFP*PRPSPT
Trigger: AGTAGGGCTGGGTCTCGGCCATGGAAAGCATACCTC...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCTTTGCACAGCGTATTaGTGGCCAGGAGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGLCTAY*WPGEPD
Trigger: ATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR TCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCACTCTCCTGACATATaGAGCCTTATCCCGCAGACC +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGHSPDI*SLIPQT
Trigger: GGTCTGCGGGATAAGGCTTCATATGTCAGGAGAGTG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR TCA 90 bp CTAATGAAGGCAGTGAGGGTTAAAGGAAACTTCCTGAAGGAGCTTATGAGTGAGCTGGGCTACTGCTCTTaGGGAAACTATCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: LMKAVRVKGNFLKELMSELGYCS*GNYPTD
Trigger: ATCTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAG...CTCACTCATAAGCTCCTTCAGGAAGTTTCCTTTAACCCTCACTGCCTTCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGCTAGCAAAGGTCCCTTaGCCCGCACAAGGACATCAG +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWLAKVP*PAQGHQ
Trigger: CTGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAG...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACGATTGGGGACTAGCATaGGGGCTCCAGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDDWGLA*GLQNQG
Trigger: TCCCTGATTCTGGAGCCCTCATGCTAGTCCCCAATC...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCTGGATGTTCACTACTTaGAGAGCCATCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIWMFTT*RAIWRV
Trigger: CACCCTCCAGATGGCTCTTCAAGTAGTGAACATCCA...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATCCGCAGACACATCCGTaGAGTACCCTCGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNPQTHP*STLEAP
Trigger: AGGAGCTTCGAGGGTACTGCACGGATGTGTCTGCGG...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAAAGATGGCAGCCTGTaGAAAGTCCGCAGACACATC +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIKDGSL*KVRRHI
Trigger: GATGTGTCTGCGGACTTTGCACAGGCTGCCATCTTT...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACTTGCCCAGTGGGCTTTaGCATACACTGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDLPSGL*HTLAPV
Trigger: CACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAA...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCATGGGTCACAACGCTCTaGCCCCTGGCATTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSWVTTL*PLAFRD
Trigger: ATCTCTAAATGCCAGGGGGCAGAGCGTTGTGACCCA...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACTGGGTCACAACGCTCTaGCCCCTGGCATTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNWVTTL*PLAFRD
Trigger: ATCTCTAAATGCCAGGGGGCAGAGCGTTGTGACCCA...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGCCCAGCCCTACTCATTaGGATGGTCTGGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRPSPTH*DGLDVH
Trigger: GTGAACATCCAGACCATCGCAATGAGTAGGGCTGGG...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACCCAGCCCTACTCATTaGGATGGTCTGGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSPSPTH*DGLDVH
Trigger: GTGAACATCCAGACCATCGCAATGAGTAGGGCTGGG...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATCTGAGCACTGAGGTATaGTTTCCATGGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNLSTEV*FPWPRP
Trigger: GGGTCTCGGCCATGGAAAGCATACCTCAGTGCTCAG...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCCAGGAGAGCCAGATCTaGTTTCAGGGGAGCATATGT +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIQESQI*FQGSIC
Trigger: ACATATGCTCCCCTGAAACCAGATCTGGCTCTCCTG...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp AAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGCTCGCACCATTGGATTaGGGTCTGAGCAGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KGNCNANGLLLPEKKSFWLAPLD*GLSSLC
Trigger: GCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAG...CCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGTCCCATCACCACACCTaGGCTACTGCTCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGSHHHT*ATALEE
Trigger: TTCCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGA...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACCACCTATGGCAAAGATaGCAGCCTGTGCAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNHLWQR*QPVQSP
Trigger: CGGACTTTGCACAGGCTGCCATCTTTGCCATAGGTG...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGTGGCAATGCCACCTATaGCAAAGATGGCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRWQCHL*QRWQPV
Trigger: CACAGGCTGCCATCTTTGCCATAGGTGGCATTGCCA...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACTGGCAATGCCACCTATaGCAAAGATGGCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNWQCHL*QRWQPV
Trigger: CACAGGCTGCCATCTTTGCCATAGGTGGCATTGCCA...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp AAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGTGGCAATGCCACCTATaGCAAAGATGGCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KGNCNANGLLLPEKKSFWWQCHL*QRWQPV
Trigger: CACAGGCTGCCATCTTTGCCATAGGTGGCATTGCCA...CCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAGAGATAGTTGCCCAGTaGGCTTTGCCATACACTGGC +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSEIVAQ*ALPYTG
Trigger: GCCAGTGTATGGCAAAGCCCACTGGGCAACTATCTC...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCAACGCTCTGCCCCCTaGCATTTAGAGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGQRSAP*HLEIVA
Trigger: GGCAACTATCTCTAAATGCCAGGGGGCAGAGCGTTG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGAGTTTTAGGAAGCTCTaGGTCACAACGCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGSFRKL*VTTLCP
Trigger: GGGGCAGAGCGTTGTGACCCAGAGCTTCCTAAAACT...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATTGGAGGGTGTCAGGATaGAATTCTCCCCGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNWRVSG*NSPRQG
Trigger: GCCTTGGCGGGGAGAATTCCATCCTGACACCCTCCA...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGAGGTATGCTTTCCATaGCCGAGACCCAGCCCTACT +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWEVCFP*PRPSPT
Trigger: AGTAGGGCTGGGTCTCGGCCATGGAAAGCATACCTC...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAGACATGTCCAAGCCTTaGGTCATGTACCTAATCACT +
Preference number: 4 (lower is better)
Translates to: LQCKWFASARKEVILGVADMSKP*VMYLIT
Trigger: AGTGATTAGGTACATGACTCAAGGCTTGGACATGTC...TGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATCATTGGATTGGGGTCTaGGCAGTCTTTGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNHWIGV*AVFAQR
Trigger: ACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATG...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR TCA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACGGACTGCCACTCTCCTaGCATATGAAGCCTTATCCC +
Preference number: 4 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDGLPLS*HMKPYP
Trigger: GGGATAAGGCTTCATATGTCAGGAGAGTGGCAGTCC...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR TCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGCCACTTTCTGTAGTTTaGTGTAGTGGGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRPLSVV*CSGAPS
Trigger: ACTCGGAGCCCCACTACATCAAACTACAGAAAGTGG...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCTTCCCCTCACTATCTTaGATGTTCTCTTCACAGCCG +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIFPSLS*MFSSQP
Trigger: CGGCTGTGAAGAGAACATTCAAGATAGTGAGGGGAA...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATGGCTCCTTCTCGTCCTaGTGTGGGAGCCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNGSFSS*CGSLSK
Trigger: TTTACTCAGGCTCCCACATCAGGACGAGAAGGAGCC...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369567.5
CDS-3UTR GCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGATAGTTCTTCCTCACTaGGGGGTTGGTAGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGIVLPH*GVGSVA
Trigger: TGCTACGCTACCAACCCCGCAGTGAGGAAGAACTAT...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCATCCTCTAGCACCTGCTaGACATTCTCATCGTTCACC +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSSSSTC*TFSSFT
Trigger: GGTGAACGATGAGAATGTGCAGCAGGTGCTAGAGGA...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACAGCTCCTCTAGCACCTaGTGCACATTCTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNSSSST*CTFSSF
Trigger: GAACGATGAGAATGTGCAGCAGGTGCTAGAGGAGCT...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp AAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGAGCTCCTCTAGCACCTaGTGCACATTCTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: KGNCNANGLLLPEKKSFWSSSST*CTFSSF
Trigger: GAACGATGAGAATGTGCAGCAGGTGCTAGAGGAGCT...CCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACACCACTGTGGTAATGTaGTCTTGTCGAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNTTVVM*SCRRPS
Trigger: GCTGGGTCTTCGACAAGAGCACATTACCACAGTGGT...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAAGGTCTCGGAAAGTCTaGACCACCACTGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSRSRKV*TTTVVM
Trigger: CATTACCACAGTGGTGGTGCAGACTTTCCGAGACCT...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGGCATTTAGAGATAGTTaGCCAGTGGGCTTTGCCATA +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLAFRDS*PVGFAI
Trigger: TATGGCAAAGCCCACTGGGCAACTATCTCTAAATGC...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGTGGGTCACAACGCTCTaGCCCCTGGCATTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWWVTTL*PLAFRD
Trigger: ATCTCTAAATGCCAGGGGGCAGAGCGTTGTGACCCA...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTCTGAGCACTGAGGTATaGTTTCCATGGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: IKGTAMQMVCFCQKRSHFLSTEV*FPWPRP
Trigger: GGGTCTCGGCCATGGAAAGCATACCTCAGTGCTCAG...AAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp TGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGACACCTGTTTCACAGAGATCTaGATTTCTGAGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WFASARKEVILGVARLDTCFTEI*ISEFPG
Trigger: GCCTGGAAACTCAGAAATGCAGATCTCTGTGAAACA...GGTGTCAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCAGGAGAGCCAGATCTaGTTTCAGGGGAGCATATGT +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGQESQI*FQGSIC
Trigger: ACATATGCTCCCCTGAAACCAGATCTGGCTCTCCTG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACTCAGCCTGGCCCCATTaGTCCAGTTTTGACATTCGA +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNSAWPH*SSFDIR
Trigger: TCGAATGTCAAAACTGGACCAATGGGGCCAGGCTGA...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGGGCTTTGCCATACACTaGCACCAGTGTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRGFAIH*HQCVEV
Trigger: GACTTCAACACACTGGTGCCAGTGTATGGCAAAGCC...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCTGGGCTACTGCTCTTaGGGAAACTATCCAACAGAT +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGLGYCS*GNYPTD
Trigger: ATCTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATCCACTTTCTGTAGTTTaGTGTAGTGGGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNPLSVV*CSGAPS
Trigger: ACTCGGAGCCCCACTACATCAAACTACAGAAAGTGG...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGCCACTTTCTGTAGTTTaGTGTAGTGGGGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWPLSVV*CSGAPS
Trigger: ACTCGGAGCCCCACTACATCAAACTACAGAAAGTGG...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACACAGCTTCAGTACACTaGGGACACAACCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDTASVH*GHNQTR
Trigger: CCTGGTTTGGTTGTGTCCTCAGTGTACTGAAGCTGT...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCATTCCCCTCACTATCTTaGATGTTCTCTTCACAGCCG +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSFPSLS*MFSSQP
Trigger: CGGCTGTGAAGAGAACATTCAAGATAGTGAGGGGAA...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATTGGATGTTCACTACTTaGAGAGCCATCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNWMFTT*RAIWRV
Trigger: CACCCTCCAGATGGCTCTTCAAGTAGTGAACATCCA...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGTGGATGTTCACTACTTaGAGAGCCATCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWWMFTT*RAIWRV
Trigger: CACCCTCCAGATGGCTCTTCAAGTAGTGAACATCCA...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGCTACAACATCATCACTaGAAAATGGGGTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLLQHHH*KMGSIA
Trigger: GGCAATTGACCCCATTTTTCAGTGATGATGTTGTAG...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACGGGAGTGGCAAGACTTaGCACCAAAGAGGTACTTTA +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNGSGKT*HQRGTL
Trigger: TAAAGTACCTCTTTGGTGTCAAGTCTTGCCACTCCC...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCCCATTGGTCCAGTTTTaGCATTCTAATCACTCGCTG +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIPLVQF*HSNHSL
Trigger: CAGCGAGTGATTAGAATGTCAAAACTGGACCAATGG...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369567.5
CDS-3UTR GCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGATAGTTCTTCCTCACTaGGGGGTTGGTAGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWIVLPH*GVGSVA
Trigger: TGCTACGCTACCAACCCCGCAGTGAGGAAGAACTAT...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATTCCTCTAGCACCTGCTaGACATTCTCATCGTTCACC +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNSSSTC*TFSSFT
Trigger: GGTGAACGATGAGAATGTGCAGCAGGTGCTAGAGGA...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGAGCTCCTCTAGCACCTaGTGCACATTCTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWSSSST*CTFSSF
Trigger: GAACGATGAGAATGTGCAGCAGGTGCTAGAGGAGCT...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACTGTAAGTCCTGGCAATaGCACCTATGGCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNCKSWQ*HLWQRW
Trigger: CCATCTTTGCCATAGGTGGCATTGCCAGGACTTACA...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGACCACTGTGGTAATGTaGTCTTGTCGAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWTTVVM*SCRRPS
Trigger: GCTGGGTCTTCGACAAGAGCACATTACCACAGTGGT...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCGCATTTAGAGATAGTTaGCCAGTGGGCTTTGCCATA +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIAFRDS*PVGFAI
Trigger: TATGGCAAAGCCCACTGGGCAACTATCTCTAAATGC...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTTCAATACTTCAGCCTaGCCCCATTGGTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: MQMVCFCQKRSHFGSGKTFNTSA*PHWSSF
Trigger: AAAACTGGACCAATGGGGCCAGGCTGAAGTATTGAA...AGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATCACCTATGGCAAAGATaGCAGCCTGTGCAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNHLWQR*QPVQSP
Trigger: CGGACTTTGCACAGGCTGCCATCTTTGCCATAGGTG...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CCCCTATCAGTTTCCACACATCAGCCATCTTTAATTACTAACACAATTCCTAAACACCTATGGCAAAGATaGCAGCCTGTGCAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: PLSVSTHQPSLITNTIPKHLWQR*QPVQSP
Trigger: CGGACTTTGCACAGGCTGCCATCTTTGCCATAGGTG...TTTAGGAATTGTGTTAGTAATTAAAGATGGCTGATGTGTGGAAACTGATAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGCTCCATCTTAACAGCTaGAAATGTTTCCGACTTCAC +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLLHLNS*KCFRLH
Trigger: GTGAAGTCGGAAACATTTCCAGCTGTTAAGATGGAG...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGGCTTTGCCATACACTaGCACCAGTGTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWGFAIH*HQCVEV
Trigger: GACTTCAACACACTGGTGCCAGTGTATGGCAAAGCC...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGTTTTAGGAAGCTCTaGGTCACAACGCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNSFRKL*VTTLCP
Trigger: GGGGCAGAGCGTTGTGACCCAGAGCTTCCTAAAACT...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
3UTR CAA 72 bp TGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTaGGGAGTGGCAAGACTTGACACCAAAGAGGTACTT +
Preference number: 4 (lower is better)
Translates to: CKWFASARKEVI*GVARLDTKEVL
Trigger: AAGTACCTCTTTGGTGTCAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
3UTR CAA 72 bp AAGCAGGTGTATAAAGGGAACTGCAATGCAAATGGTTaGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KQVYKGNCNANG*LLPEKKSFWEW
Trigger: CCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTATACACCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGGACATGTCCAAGCCTTaGGTCATGTACCTAATCACT +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGDMSKP*VMYLIT
Trigger: AGTGATTAGGTACATGACTCAAGGCTTGGACATGTC...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR TCA 90 bp AATTCAAGAAGATATGAGGGTGAGAAAATGTTCCAGGCAATAAATAAAAGCAGGCACTCTCCTGACATATaGAGCCTTATCCCGCAGACC +
Preference number: 4 (lower is better)
Translates to: NSRRYEGEKMFQAINKSRHSPDI*SLIPQT
Trigger: GGTCTGCGGGATAAGGCTTCATATGTCAGGAGAGTG...CCTGCTTTTATTTATTGCCTGGAACATTTTCTCACCCTCATATCTTCTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCCGATTTAAGAGATGGTaGGCAATGGGCTTATTGATG +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIRFKRW*AMGLLM
Trigger: CATCAATAAGCCCATTGCTCACCATCTCTTAAATCG...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR TCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAAGATCTGGCGTACATaGCAAAGAGCAACAAAACAG +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIKIWRT*QRATKQ
Trigger: CTGTTTTGTTGCTCTTTGTCATGTACGCCAGATCTT...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp ATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTACAGCTTCAGTACACTaGGGACACAACCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: IKGTAMQMVCFCQKRSHFTASVH*GHNQTR
Trigger: CCTGGTTTGGTTGTGTCCTCAGTGTACTGAAGCTGT...AAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCTTGAATGTGAGGATTaGACAGAGCCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGLECED*TEPSSA
Trigger: AGCTGAAGAAGGCTCTGTGCAATCCTCACATTCAAG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATATAGTTCTTCCTCACTaGGGGGTTGGTAGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNIVLPH*GVGSVA
Trigger: TGCTACGCTACCAACCCCGCAGTGAGGAAGAACTAT...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAAAGATGGCAGCCTGTaGAAAGTCCGCAGACACATC +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNKDGSL*KVRRHI
Trigger: GATGTGTCTGCGGACTTTGCACAGGCTGCCATCTTT...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATTGTAAGTCCTGGCAATaGCACCTATGGCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNCKSWQ*HLWQRW
Trigger: CCATCTTTGCCATAGGTGGCATTGCCAGGACTTACA...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGTCTCGGAAAGTCTaGACCACCACTGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNRSRKV*TTTVVM
Trigger: CATTACCACAGTGGTGGTGCAGACTTTCCGAGACCT...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGGAAGATTATGCATCTTaGCACATCCAAGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGEDYAS*HIQGLP
Trigger: TGGCAGTCCTTGGATGTGCCAAGATGCATAATCTTC...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACGAAGATTATGCATCTTaGCACATCCAAGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNEDYAS*HIQGLP
Trigger: TGGCAGTCCTTGGATGTGCCAAGATGCATAATCTTC...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTACAATTGGATCCTaGTCACGCAGCAAACTGTAT +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIITTIGS*SRSKLY
Trigger: ATACAGTTTGCTGCGTGACCAGGATCCAATTGTAGT...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAGTTCACAACTACAATTaGATCCTGGTCACGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSVHNYN*ILVTQQ
Trigger: TTGCTGCGTGACCAGGATCCAATTGTAGTTGTGAAC...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGGTTCACAACTACAATTaGATCCTGGTCACGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGVHNYN*ILVTQQ
Trigger: TTGCTGCGTGACCAGGATCCAATTGTAGTTGTGAAC...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACTTCAATACTTCAGCCTaGCCCCATTGGTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNFNTSA*PHWSSF
Trigger: AAAACTGGACCAATGGGGCCAGGCTGAAGTATTGAA...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGTTCAATACTTCAGCCTaGCCCCATTGGTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRFNTSA*PHWSSF
Trigger: AAAACTGGACCAATGGGGCCAGGCTGAAGTATTGAA...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATGGCTTTGCCATACACTaGCACCAGTGTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNGFAIH*HQCVEV
Trigger: GACTTCAACACACTGGTGCCAGTGTATGGCAAAGCC...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGCCCTACTCATTGCGATaGTCTGGATGTTCACTACTT +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRPYSLR*SGCSLL
Trigger: AAGTAGTGAACATCCAGACCATCGCAATGAGTAGGG...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACCCTACTCATTGCGATaGTCTGGATGTTCACTACTT +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSPYSLR*SGCSLL
Trigger: AAGTAGTGAACATCCAGACCATCGCAATGAGTAGGG...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGTCAGCCTGGCCCCATTaGTCCAGTTTTGACATTCTA +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWSAWPH*SSFDIL
Trigger: TAGAATGTCAAAACTGGACCAATGGGGCCAGGCTGA...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369567.5
CDS-3UTR TCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGAAGATCTGGCGTACATaGCAAAGAGCAACAAAACAG +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGKIWRT*QRATKQ
Trigger: CTGTTTTGTTGCTCTTTGTCATGTACGCCAGATCTT...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp GAAAGAAGCAGGTGTATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGACTCTCCTTTGTATCTaGTATTATCTGGACTTACTG +
Preference number: 4 (lower is better)
Translates to: ERSRCIKGTAMQMVCFCQTLLCI*YYLDLL
Trigger: CAGTAAGTCCAGATAATATCAGATACAAAGGAGAGT...CTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTATACACCTGCTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCTACAACATCATCACTaGAAAATGGGGTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGLQHHH*KMGSIA
Trigger: GGCAATTGACCCCATTTTTCAGTGATGATGTTGTAG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACCTTGAATGTGAGGATTaGACAGAGCCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDLECED*TEPSSA
Trigger: AGCTGAAGAAGGCTCTGTGCAATCCTCACATTCAAG...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGTCAGGGGAGCATATGTaGACATGTACAGATAAACCA +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRSGEHM*TCTDKP
Trigger: TGGTTTATCTGTACATGTGCACATATGCTCCCCTGA...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR GCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGCATTTAGAGATAGTTaGCCAGTGGGCTTTGCCATA +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNAFRDS*PVGFAI
Trigger: TATGGCAAAGCCCACTGGGCAACTATCTCTAAATGC...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCATGTTTCACAGAGATCTaGATTTCTGAGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSCFTEI*ISEFPG
Trigger: GCCTGGAAACTCAGAAATGCAGATCTCTGTGAAACA...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACATCAGTTTGTACGTaGGGAAACATTTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIITSVCT*GNIFAK
Trigger: CTTGGCAAAAATGTTTCCCCACGTACAAACTGATGT...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAATCATCACTGAAAAATaGGGTCAATTGCCAATAGGA +
Preference number: 4 (lower is better)
Translates to: LQCKWFASARKEVILGVAIITEK*GQLPIG
Trigger: TCCTATTGGCAATTGACCCCATTTTTCAGTGATGAT...TGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATCTACAACATCATCACTaGAAAATGGGGTCAATTGCC +
Preference number: 4 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNLQHHH*KMGSIA
Trigger: GGCAATTGACCCCATTTTTCAGTGATGATGTTGTAG...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp ATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTCTTGAATGTGAGGATTaGACAGAGCCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IKGTAMQMVCFCQKRSHFLECED*TEPSSA
Trigger: AGCTGAAGAAGGCTCTGTGCAATCCTCACATTCAAG...AAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp AATTCAAGAAGATATGAGGGTGAGAAAATGTTCCAGGCAATAAATAAAAGCAGGTGTAAGTCCTGGCAATaGCACCTATGGCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: NSRRYEGEKMFQAINKSRCKSWQ*HLWQRW
Trigger: CCATCTTTGCCATAGGTGGCATTGCCAGGACTTACA...CCTGCTTTTATTTATTGCCTGGAACATTTTCTCACCCTCATATCTTCTTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp GCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTTGCTTTTTCTTCCTCTATaGAGTAATACAACAAACGTC +
Preference number: 4 (lower is better)
Translates to: ANGLLLPEKKSFWEWQDLLFLPL*SNTTNV
Trigger: GACGTTTGTTGTATTACTGCATAGAGGAAGAAAAAG...CAAGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAGCAATGCAAATGGTTTaGTTCTGCCAGAAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSAMQMV*FCQKRS
Trigger: ACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGC...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACACATCAGTTTGTACGTaGGGAAACATTTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNTSVCT*GNIFAK
Trigger: CTTGGCAAAAATGTTTCCCCACGTACAAACTGATGT...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGCTCCATCTTAACAGCTaGAAATGTTTCCGACTTCAC +
Preference number: 4 (lower is better)
Translates to: STHLLTNINLYNIITEKWLHLNS*KCFRLH
Trigger: GTGAAGTCGGAAACATTTCCAGCTGTTAAGATGGAG...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCATCATCACTGAAAAATaGGGTCAATTGCCAATAGGA +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIIITEK*GQLPIG
Trigger: TCCTATTGGCAATTGACCCCATTTTTCAGTGATGAT...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp ATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTCGATTTAAGAGATGGTaGGCAATGGGCTTATTGATG +
Preference number: 4 (lower is better)
Translates to: IKGTAMQMVCFCQKRSHFRFKRW*AMGLLM
Trigger: CATCAATAAGCCCATTGCTCACCATCTCTTAAATCG...AAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR TCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAAGATCTGGCGTACATaGCAAAGAGCAACAAAACAG +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNKIWRT*QRATKQ
Trigger: CTGTTTTGTTGCTCTTTGTCATGTACGCCAGATCTT...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAGTTAACACAGAGGTaGAAGAAGCAGGTGTATAAA +
Preference number: 4 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRKLTQR*KKQVYK
Trigger: TTTATACACCTGCTTCTTTCACCTCTGTGTTAACTT...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp CCCCTATCAGTTTCCACACATCAGCCATCTTTAATTACTAACACAATTCCTAAATCAGGGGAGCATATGTaGACATGTACAGATAAACCA +
Preference number: 4 (lower is better)
Translates to: PLSVSTHQPSLITNTIPKSGEHM*TCTDKP
Trigger: TGGTTTATCTGTACATGTGCACATATGCTCCCCTGA...TTTAGGAATTGTGTTAGTAATTAAAGATGGCTGATGTGTGGAAACTGATAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCCTTTTTCTTCCTCTATaGAGTAATACAACAAACGTC +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIILFLPL*SNTTNV
Trigger: GACGTTTGTTGTATTACTGCATAGAGGAAGAAAAAG...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCGTTCTTGCCATAAGTTaGTTCAATGTACAAAATGTG +
Preference number: 4 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIVLAIS*FNVQNV
Trigger: CACATTTTGTACATTGAAGCAACTTATGGCAAGAAC...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATACTACAATTGGATCCTaGTCACGCAGCAAACTGTAT +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNTTIGS*SRSKLY
Trigger: ATACAGTTTGCTGCGTGACCAGGATCCAATTGTAGT...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATCTCCATCTTAACAGCTaGAAATGTTTCCGACTTCAC +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNLHLNS*KCFRLH
Trigger: GTGAAGTCGGAAACATTTCCAGCTGTTAAGATGGAG...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR TCA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACACTCTCCTTTGTATCTaGTATTATCTGGACTTACTG +
Preference number: 4 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDTLLCI*YYLDLL
Trigger: CAGTAAGTCCAGATAATATCAGATACAAAGGAGAGT...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR GCA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTTTTTCTTCCTCTATaGAGTAATACAACAAACGTC +
Preference number: 4 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSLFLPL*SNTTNV
Trigger: GACGTTTGTTGTATTACTGCATAGAGGAAGAAAAAG...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CCA 90 bp ATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTACATCAGTTTGTACGTaGGGAAACATTTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: IKGTAMQMVCFCQKRSHFTSVCT*GNIFAK
Trigger: CTTGGCAAAAATGTTTCCCCACGTACAAACTGATGT...AAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR GCA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATGTGTATAAAGGGAACTaGAATGCAAATGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNVYKGN*NANGLL
Trigger: AAGCAAACCATTTGCATTGCAGTTCCCTTTATACAC...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp TCAAGAAGATATGAGGGTGAGAAAATGTTCCAGGCAATAAATAAAAGCAGGTTTAAGGACTTTGGAATCTaGCCTAAAAGCATGATTGGA +
Preference number: 4 (lower is better)
Translates to: SRRYEGEKMFQAINKSRFKDFGI*PKSMIG
Trigger: TCCAATCATGCTTTTAGGCCAGATTCCAAAGTCCTT...AAACCTGCTTTTATTTATTGCCTGGAACATTTTCTCACCCTCATATCTTCTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CCA 90 bp TTAGATGACATTAAGGACTTTGGAATCTGGCCTAAAAGCATGATTGGAAATATGGAACTGCAATGCAAATaGTTTGCTTCTGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LDDIKDFGIWPKSMIGNMELQCK*FASARK
Trigger: TTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTC...CATATTTCCAATCATGCTTTTAGGCCAGATTCCAAAGTCCTTAATGTCATCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS GCA 90 bp CCCCTCCACGCCGTTCTCATCGCGGATAGGCCCAATCTTGCTTTCTaGGGAAGTCCCGCCCCCTTGTCAAGAGACCAAACAGAAGACCGC +
Preference number: 5 (lower is better)
Translates to: PLHAVLIADRPNLAF*GSPAPLSRDQTEDR
Trigger: GCGGTCTTCTGTTTGGTCTCTTGACAAGGGGGCGGGACTTCCGCAGAAAGCAAGATTGGGCCTATCCGCGATGAGAACGGCGTGGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369564.5
CDS GCA 90 bp TCCGCAGACACATCCGTGCAGTACCCTCGAAGCTCCTCTAGCACCTaGTGCACATTCTCATCGTTCACCAGTTCACACAGCACCTCCACT +
Preference number: 5 (lower is better)
Translates to: SADTSVQYPRSSSST*CTFSSFTSSHSTST
Trigger: AGTGGAGGTGCTGTGTGAACTGGTGAACGATGAGAATGTGCAGCAGGTGCTAGAGGAGCTTCGAGGGTACTGCACGGATGTGTCTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000479285.5
CDS TCA 90 bp CTCGCACCATTGGATTGGGGTCTGAGCAGTCTTTGCACAGCGTATTaGTGGCCAGGAGAGCCAGATCTGGTTTCAGGGGAGCATATGTGC +
Preference number: 5 (lower is better)
Translates to: LAPLDWGLSSLCTAY*WPGEPDLVSGEHMC
Trigger: GCACATATGCTCCCCTGAAACCAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489499.5
CDS TCA 90 bp CGAGACCCAGCCCTACTCATTGCGATGGTCTGGATGTTCACTACTTaGAGAGCCATCTGGAGGGTGTCAGGATGGAATTCTCCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: RDPALLIAMVWMFTT*RAIWRVSGWNSPRQ
Trigger: TTGGCGGGGAGAATTCCATCCTGACACCCTCCAGATGGCTCTTCAAGTAGTGAACATCCAGACCATCGCAATGAGTAGGGCTGGGTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS GCA 90 bp GCAGACACATCCGTGCAGTACCCTCGAAGCTCCTCTAGCACCTGCTaGACATTCTCATCGTTCACCAGTTCACACAGCACCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: ADTSVQYPRSSSSTC*TFSSFTSSHSTSTF
Trigger: GAAAGTGGAGGTGCTGTGTGAACTGGTGAACGATGAGAATGTGCAGCAGGTGCTAGAGGAGCTTCGAGGGTACTGCACGGATGTGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000479285.5
CDS GCA 90 bp CTATGGCAAAGATGGCAGCCTGTGCAAAGTCCGCAGACACATCCGTaGAGTACCCTCGAAGCTCCTCTAGCACCTGCTGCACATTCTCAT +
Preference number: 5 (lower is better)
Translates to: LWQRWQPVQSPQTHP*STLEAPLAPAAHSH
Trigger: ATGAGAATGTGCAGCAGGTGCTAGAGGAGCTTCGAGGGTACTGCACGGATGTGTCTGCGGACTTTGCACAGGCTGCCATCTTTGCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000460653.1
ENST00000479285.5
CDS GCA 90 bp AAGCTCTGGGTCACAACGCTCTGCCCCCTGGCATTTAGAGATAGTTaGCCAGTGGGCTTTGCCATACACTGGCACCAGTGTGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: KLWVTTLCPLAFRDS*PVGFAIHWHQCVEV
Trigger: GACTTCAACACACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAACTATCTCTAAATGCCAGGGGGCAGAGCGTTGTGACCCAGAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS CCA 90 bp GAACAGACAGCCAGTATCATCCTGAGCACTGAGGTATGCTTTCCATaGCCGAGACCCAGCCCTACTCATTGCGATGGTCTGGATGTTCAC +
Preference number: 5 (lower is better)
Translates to: EQTASIILSTEVCFP*PRPSPTHCDGLDVH
Trigger: GTGAACATCCAGACCATCGCAATGAGTAGGGCTGGGTCTCGGCCATGGAAAGCATACCTCAGTGCTCAGGATGATACTGGCTGTCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS TCA 90 bp GGCTCCAATAGCAGTTCTGTTAAGAACAGACAGCCAGTATCATCCTaGGCACTGAGGTATGCTTTCCATGGCCGAGACCCAGCCCTACTC +
Preference number: 5 (lower is better)
Translates to: GSNSSSVKNRQPVSS*ALRYAFHGRDPALL
Trigger: GAGTAGGGCTGGGTCTCGGCCATGGAAAGCATACCTCAGTGCTCAGGATGATACTGGCTGTCTGTTCTTAACAGAACTGCTATTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS TCA 90 bp CTCGCACCATTGGATTGGGGTCTGAGCAGTCTTTGCACAGCGTATTaGTGGCCAGGAGAGCCAGATCTAATCACTCGCTGGATGACATTC +
Preference number: 5 (lower is better)
Translates to: LAPLDWGLSSLCTAY*WPGEPDLITRWMTF
Trigger: GAATGTCATCCAGCGAGTGATTAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489092.5
CDS CCA 90 bp AAGGATGAAGTTTTAGGAAGCTCTGGGTCACAACGCTCTGCCCCCTaGCATTTAGAGATAGTTGCCCAGTGGGCTTTGCCATACACTGGC +
Preference number: 5 (lower is better)
Translates to: KDEVLGSSGSQRSAP*HLEIVAQWALPYTG
Trigger: GCCAGTGTATGGCAAAGCCCACTGGGCAACTATCTCTAAATGCCAGGGGGCAGAGCGTTGTGACCCAGAGCTTCCTAAAACTTCATCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS TCA 90 bp AGAGCTCACGGCTCTCTGAAGAACAGGCAGCTAGCAAAGGTCCCTTaGCCCGCACAAGGACATCAGTTTGTACGTGGGGAAACATTTTTG +
Preference number: 5 (lower is better)
Translates to: RAHGSLKNRQLAKVP*PAQGHQFVRGETFL
Trigger: CAAAAATGTTTCCCCACGTACAAACTGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAGCTGCCTGTTCTTCAGAGAGCCGTGAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000432415.5
ENST00000479285.5
ENST00000489092.5
ENST00000489499.5
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCCAGCCCTCGCACCATaGGATTGGGGTCTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGPALAP*DWGLSS
Trigger: ACTGCTCAGACCCCAATCCAATGGTGCGAGGGCTGG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp GAGGACAAGCAACAAGAAAACAATTACAATACTACTGCTAGAGGTATGCTCTGGCCAGCCCTCGCACCATaGGATTGGGGTCTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: EDKQQENNYNTTARGMLWPALAP*DWGLSS
Trigger: ACTGCTCAGACCCCAATCCAATGGTGCGAGGGCTGG...CCAGAGCATACCTCTAGCAGTAGTATTGTAATTGTTTTCTTGTTGCTTGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp GAAAGAAGCAGGTGTATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGGCTAGCAAAGGTCCCTaGACCCGCACAAGGACATCA +
Preference number: 5 (lower is better)
Translates to: ERSRCIKGTAMQMVCFCQASKGP*TRTRTS
Trigger: TGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAGC...CTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTATACACCTGCTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCGGGTCTGAGCAGTCTTaGCACAGCGTATTGATGGCC +
Preference number: 5 (lower is better)
Translates to: QIPSSTHLLTNINLYNIIGSEQS*HSVLMA
Trigger: GGCCATCAATACGCTGTGCAAAGACTGCTCAGACCC...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGGTTGCCCAGTGGGCTTaGCCATACACTGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGVAQWA*PYTGTS
Trigger: ACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAAC...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp GAGGACAAGCAACAAGAAAACAATTACAATACTACTGCTAGAGGTATGCTCTGGGTTGCCCAGTGGGCTTaGCCATACACTGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: EDKQQENNYNTTARGMLWVAQWA*PYTGTS
Trigger: ACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAAC...CCAGAGCATACCTCTAGCAGTAGTATTGTAATTGTTTTCTTGTTGCTTGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGGCAGTAAGCTGGCGATaGGGGACTAGCATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGAVSWR*GTSMRA
Trigger: AGCCCTCATGCTAGTCCCCAATCGCCAGCTTACTGC...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAGGGTCTGAGCAGTCTTaGCACAGCGTATTGATGGCC +
Preference number: 5 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSGSEQS*HSVLMA
Trigger: GGCCATCAATACGCTGTGCAAAGACTGCTCAGACCC...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGACTGGCACCAGTGTGTaGAAGTCTGAGGCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRTGTSV*KSEAQL
Trigger: TAGCTGGGCCTCAGACTTCAACACACTGGTGCCAGT...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCAGTAAGCTGGCGATaGGGGACTAGCATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: STHLLTNINLYNIITEKWAVSWR*GTSMRA
Trigger: AGCCCTCATGCTAGTCCCCAATCGCCAGCTTACTGC...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACGCAGTAAGCTGGCGATaGGGGACTAGCATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDAVSWR*GTSMRA
Trigger: AGCCCTCATGCTAGTCCCCAATCGCCAGCTTACTGC...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CTAATGAAGGCAGTGAGGGTTAAAGGAAACTTCCTGAAGGAGCTTATGAGTGAGCCGCCAAGGCAACACTaGCTGATGAGCAACTTTAAG +
Preference number: 5 (lower is better)
Translates to: LMKAVRVKGNFLKELMSEPPRQH*LMSNFK
Trigger: CTTAAAGTTGCTCATCAGCAAGTGTTGCCTTGGCGG...CTCACTCATAAGCTCCTTCAGGAAGTTTCCTTTAACCCTCACTGCCTTCATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS GCA 90 bp ACATACCTCAGCCCCTGTTCACCTAACAGATGGTTTAGTAGATGCTaGACCCATCAGATCATGAAGAATTGCAGAAAGCCTCTATCAAGC +
Preference number: 5 (lower is better)
Translates to: TYLSPCSPNRWFSRC*THQIMKNCRKPLSS
Trigger: GCTTGATAGAGGCTTTCTGCAATTCTTCATGATCTGATGGGTGCAGCATCTACTAAACCATCTGTTAGGTGAACAGGGGCTGAGGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472122.1
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGGCGCAGCCTATCAGCTaGAATGTGAGGATTGCACAG +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGAQPIS*NVRIAQ
Trigger: CTGTGCAATCCTCACATTCAAGCTGATAGGCTGCGC...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCATCTTTGCACAGCGTATaGATGGCCAGGAGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSSLHSV*MARRAR
Trigger: TCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGA...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp CTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGTTCACAACTACAATaGGATCCTGGTCACGCAGCA +
Preference number: 5 (lower is better)
Translates to: LQCKWFASARKEVILGVASSQLQ*DPGHAA
Trigger: TGCTGCGTGACCAGGATCCAATTGTAGTTGTGAACT...TGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGCTAGCAAAGGTCCCTaGACCCGCACAAGGACATCA +
Preference number: 5 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNASKGP*TRTRTS
Trigger: TGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAGC...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCTGTGGTAATGTGCTCTaGTCGAAGACCCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: QIPSSTHLLTNINLYNIICGNVL*SKTQQL
Trigger: GAGTTGCTGGGTCTTCGACAAGAGCACATTACCACA...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACACTGGCACCAGTGTGTaGAAGTCTGAGGCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDTGTSV*KSEAQL
Trigger: TAGCTGGGCCTCAGACTTCAACACACTGGTGCCAGT...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATGTTGCCCAGTGGGCTTaGCCATACACTGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNVAQWA*PYTGTS
Trigger: ACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAAC...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGAATCAGGGAGTTCTaGTACCCTCTCCTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LQCKWFASARKEVILGVARIREF*YPLLVL
Trigger: GAGAACAAGGAGAGGGTACAAGAACTCCCTGATTCT...TGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACACCCAGCCCTACTCATaGCGATGGTCTGGATGTTCA +
Preference number: 5 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNTQPYS*RWSGCS
Trigger: TGAACATCCAGACCATCGCAATGAGTAGGGCTGGGT...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp GAGGACAAGCAACAAGAAAACAATTACAATACTACTGCTAGAGGTATGCTCTGGACCCAGCCCTACTCATaGCGATGGTCTGGATGTTCA +
Preference number: 5 (lower is better)
Translates to: EDKQQENNYNTTARGMLWTQPYS*RWSGCS
Trigger: TGAACATCCAGACCATCGCAATGAGTAGGGCTGGGT...CCAGAGCATACCTCTAGCAGTAGTATTGTAATTGTTTTCTTGTTGCTTGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS TCA 90 bp ATTATGCATCTTGGCACATCCAAGGACTGCCACTCTCCTGACATATaGAGCCTTATCCCGCAGACCATTGAGAATAGGCTGTTGTATATA +
Preference number: 5 (lower is better)
Translates to: IMHLGTSKDCHSPDI*SLIPQTIENRLLYI
Trigger: TATATACAACAGCCTATTCTCAATGGTCTGCGGGATAAGGCTTCATATGTCAGGAGAGTGGCAGTCCTTGGATGTGCCAAGATGCATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000472122.1
ENST00000484201.5
ENST00000489092.5
ENST00000489499.5
CDS GCA 90 bp TTGACATACCTCAGCCCCTGTTCACCTAACAGATGGTTTAGTAGATaGTGCACCCATCAGATCATGAAGAATTGCAGAAAGCCTCTATCA +
Preference number: 5 (lower is better)
Translates to: LTYLSPCSPNRWFSR*CTHQIMKNCRKPLS
Trigger: TGATAGAGGCTTTCTGCAATTCTTCATGATCTGATGGGTGCAGCATCTACTAAACCATCTGTTAGGTGAACAGGGGCTGAGGTATGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472122.1
CDS CCA 90 bp TTTTGCCAAGATCAGAAAAAGTTTGGTAGCTCCCATCACCACACCTaGGCTACTGCTCTTGAGGAAACTATCCAACAGATTGAGAATGTC +
Preference number: 5 (lower is better)
Translates to: FCQDQKKFGSSHHHT*ATALEETIQQIENV
Trigger: GACATTCTCAATCTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGAGCTACCAAACTTTTTCTGATCTTGGCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000432415.5
ENST00000489092.5
ENST00000489499.5
CDS-3UTR CAA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCGCAGCCTATCAGCTaGAATGTGAGGATTGCACAG +
Preference number: 5 (lower is better)
Translates to: STHLLTNINLYNIITEKWAQPIS*NVRIAQ
Trigger: CTGTGCAATCCTCACATTCAAGCTGATAGGCTGCGC...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATGCTAGCAAAGGTCCCTaGACCCGCACAAGGACATCA +
Preference number: 5 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNASKGP*TRTRTS
Trigger: TGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAGC...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGTGTGGTAATGTGCTCTaGTCGAAGACCCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGCGNVL*SKTQQL
Trigger: GAGTTGCTGGGTCTTCGACAAGAGCACATTACCACA...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CCCCTATCAGTTTCCACACATCAGCCATCTTTAATTACTAACACAATTCCTAAAACTGGCACCAGTGTGTaGAAGTCTGAGGCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: PLSVSTHQPSLITNTIPKTGTSV*KSEAQL
Trigger: TAGCTGGGCCTCAGACTTCAACACACTGGTGCCAGT...TTTAGGAATTGTGTTAGTAATTAAAGATGGCTGATGTGTGGAAACTGATAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACCCGCCAAGGCAACACTaGCTGATGAGCAACTTTAAG +
Preference number: 5 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNPPRQH*LMSNFK
Trigger: CTTAAAGTTGCTCATCAGCAAGTGTTGCCTTGGCGG...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATACCCAGCCCTACTCATaGCGATGGTCTGGATGTTCA +
Preference number: 5 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNTQPYS*RWSGCS
Trigger: TGAACATCCAGACCATCGCAATGAGTAGGGCTGGGT...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS CCA 90 bp ATTTCCTCTAGAGACCTCAAGCAGTTCACAACTACAATTGGATCCTaGTCACGCAGCAAACTGTATAATTCATTTACCAGGGCACCATCT +
Preference number: 5 (lower is better)
Translates to: ISSRDLKQFTTTIGS*SRSKLYNSFTRAPS
Trigger: AGATGGTGCCCTGGTAAATGAATTATACAGTTTGCTGCGTGACCAGGATCCAATTGTAGTTGTGAACTGCTTGAGGTCTCTAGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000472122.1
ENST00000484201.5
ENST00000489092.5
CDS-3UTR CAA 90 bp ATAAAGGGAACTGCAATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGCGCAGCCTATCAGCTaGAATGTGAGGATTGCACAG +
Preference number: 5 (lower is better)
Translates to: IKGTAMQMVCFCQKRSHFAQPIS*NVRIAQ
Trigger: CTGTGCAATCCTCACATTCAAGCTGATAGGCTGCGC...AAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCAGTTCCCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp ATGCAAATGGTTTGCTTCTGCCAGAAAAGAAGTCATTTTGGGAGTGGCAAGACTAGACATGTCCAAGCCTaGAGTCATGTACCTAATCAC +
Preference number: 5 (lower is better)
Translates to: MQMVCFCQKRSHFGSGKTRHVQA*SHVPNH
Trigger: GTGATTAGGTACATGACTCAAGGCTTGGACATGTCT...AGTCTTGCCACTCCCAAAATGACTTCTTTTCTGGCAGAAGCAAACCATTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp CAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCTCTTGTACCCTCTCCTaGTTCTCTTCAGGAATCAAG +
Preference number: 5 (lower is better)
Translates to: QIPSSTHLLTNINLYNIISCTLS*FSSGIK
Trigger: CTTGATTCCTGAAGAGAACAAGGAGAGGGTACAAGA...GATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAAGAATCAGGGAGTTCTaGTACCCTCTCCTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSRIREF*YPLLVL
Trigger: GAGAACAAGGAGAGGGTACAAGAACTCCCTGATTCT...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACCCGCCAAGGCAACACTaGCTGATGAGCAACTTTAAG +
Preference number: 5 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDPPRQH*LMSNFK
Trigger: CTTAAAGTTGCTCATCAGCAAGTGTTGCCTTGGCGG...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATCTGGATGTTCACTACTaGAAGAGCCATCTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNLDVHY*KSHLEG
Trigger: ACCCTCCAGATGGCTCTTCAAGTAGTGAACATCCAG...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp TCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGCTGGATGTTCACTACTaGAAGAGCCATCTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: STHLLTNINLYNIITEKWLDVHY*KSHLEG
Trigger: ACCCTCCAGATGGCTCTTCAAGTAGTGAACATCCAG...CCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACAGACATGTCCAAGCCTaGAGTCATGTACCTAATCAC +
Preference number: 5 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNRHVQA*SHVPNH
Trigger: GTGATTAGGTACATGACTCAAGGCTTGGACATGTCT...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp TCAAGAAGATATGAGGGTGAGAAAATGTTCCAGGCAATAAATAAAAGCAGGTTTTCTTTGCACAGCGTATaGATGGCCAGGAGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SRRYEGEKMFQAINKSRFSLHSV*MARRAR
Trigger: TCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGA...AAACCTGCTTTTATTTATTGCCTGGAACATTTTCTCACCCTCATATCTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATAGTTCACAACTACAATaGGATCCTGGTCACGCAGCA +
Preference number: 5 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNSSQLQ*DPGHAA
Trigger: TGCTGCGTGACCAGGATCCAATTGTAGTTGTGAACT...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATTGTGGTAATGTGCTCTaGTCGAAGACCCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNCGNVL*SKTQQL
Trigger: GAGTTGCTGGGTCTTCGACAAGAGCACATTACCACA...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATAGAATCAGGGAGTTCTaGTACCCTCTCCTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: PQRISLPTLTSTTSSLKNRIREF*YPLLVL
Trigger: GAGAACAAGGAGAGGGTACAAGAACTCCCTGATTCT...ATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATCTGGATGTTCACTACTaGAAGAGCCATCTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNLDVHY*KSHLEG
Trigger: ACCCTCCAGATGGCTCTTCAAGTAGTGAACATCCAG...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGTCAGCGTCTCCGTTCTaGCTTCATTTTGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGSASPF*LHFVSQ
Trigger: CTGTGAAACAAAATGAAGCAAGAACGGAGACGCTGA...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCATCAGCGTCTCCGTTCTaGCTTCATTTTGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSSASPF*LHFVSQ
Trigger: CTGTGAAACAAAATGAAGCAAGAACGGAGACGCTGA...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATTGAGAATAGGCTGTaGTATATACTCCTGCACACC +
Preference number: 5 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNIENRL*YILLHT
Trigger: GGTGTGCAGGAGTATATACAACAGCCTATTCTCAAT...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp GAGGACAAGCAACAAGAAAACAATTACAATACTACTGCTAGAGGTATGCTCTGGTTATCCCGCAGACCATaGAGAATAGGCTGTTGTATA +
Preference number: 5 (lower is better)
Translates to: EDKQQENNYNTTARGMLWLSRRP*RIGCCI
Trigger: TATACAACAGCCTATTCTCAATGGTCTGCGGGATAA...CCAGAGCATACCTCTAGCAGTAGTATTGTAATTGTTTTCTTGTTGCTTGTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp ATAATCCAAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACAAGATCAGAAAAAGTTaGGTAGCTCCCATCACCACA +
Preference number: 5 (lower is better)
Translates to: IIQIPSSTHLLTNINLYNKIRKS*VAPITT
Trigger: TGTGGTGATGGGAGCTACCAAACTTTTTCTGATCTT...GTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTTGGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAAAGATCAGAAAAAGTTaGGTAGCTCCCATCACCACA +
Preference number: 5 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSKIRKS*VAPITT
Trigger: TGTGGTGATGGGAGCTACCAAACTTTTTCTGATCTT...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGAAGATCAGAAAAAGTTaGGTAGCTCCCATCACCACA +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGKIRKS*VAPITT
Trigger: TGTGGTGATGGGAGCTACCAAACTTTTTCTGATCTT...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACTCTTGTACCCTCTCCTaGTTCTCTTCAGGAATCAAG +
Preference number: 5 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDSCTLS*FSSGIK
Trigger: CTTGATTCCTGAAGAGAACAAGGAGAGGGTACAAGA...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp TTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGTGCAATGCAAATGGTTaGCTTCTGCCAGAAAAGAAG +
Preference number: 5 (lower is better)
Translates to: FHSPLYLILSGLTGSSNRCNANG*LLPEKK
Trigger: CTTCTTTTCTGGCAGAAGCAAACCATTTGCATTGCA...CCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACTTATCCCGCAGACCATaGAGAATAGGCTGTTGTATA +
Preference number: 5 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDLSRRP*RIGCCI
Trigger: TATACAACAGCCTATTCTCAATGGTCTGCGGGATAA...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCCCATTGGTCCAGTTTaGACATTCGATTTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGPIGPV*TFDLRD
Trigger: ATCTCTTAAATCGAATGTCAAAACTGGACCAATGGG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256658.8
ENST00000369569.6
CDS-3UTR CAA 90 bp CAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCACTGAAAAATGGGCGTTCTTGCTTCATTTaGTTTCACAGAGATCTGCAT +
Preference number: 5 (lower is better)
Translates to: QRISLPTLTSTTSSLKNGRSCFI*FHRDLH
Trigger: ATGCAGATCTCTGTGAAACAAAATGAAGCAAGAACG...CCCATTTTTCAGTGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp AAATCCCATCCTCAACGCATCTCCTTACCAACATTAACCTCTACAACATCATCAGAAAAATGGGGTCAATaGCCAATAGGAATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: KSHPQRISLPTLTSTTSSEKWGQ*PIGMKG
Trigger: TCCTTTCATTCCTATTGGCAATTGACCCCATTTTTC...TGATGATGTTGTAGAGGTTAATGTTGGTAAGGAGATGCGTTGAGGATGGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS TCA 90 bp GAACCTCTTTCTTGCTCACAAATGCTTCAAATTCAGGCAACAGTCTaGGGTTTAGTGCTAAGATACTCTACTTTCCACCAATCATTGAAA +
Preference number: 5 (lower is better)
Translates to: EPLSCSQMLQIQATV*GLVLRYSTFHQSLK
Trigger: TTTCAATGATTGGTGGAAAGTAGAGTATCTTAGCACTAAACCTCAGACTGTTGCCTGAATTTGAAGCATTTGTGAGCAAGAAAGAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462591.1
ENST00000479285.5
CDS-3UTR CAA 90 bp TCAAGAAGATATGAGGGTGAGAAAATGTTCCAGGCAATAAATAAAAGCAGGTTTTCTTGTACCCTCTCCTaGTTCTCTTCAGGAATCAAG +
Preference number: 5 (lower is better)
Translates to: SRRYEGEKMFQAINKSRFSCTLS*FSSGIK
Trigger: CTTGATTCCTGAAGAGAACAAGGAGAGGGTACAAGA...AAACCTGCTTTTATTTATTGCCTGGAACATTTTCTCACCCTCATATCTTCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp TCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATAGGAAAGACGAAAAATGGGGTCAATaGCCAATAGGAATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SPLYLILSGLTGSSNRKDEKWGQ*PIGMKG
Trigger: TCCTTTCATTCCTATTGGCAATTGACCCCATTTTTC...GTCTTTCCTATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp TTAGATGACATTAAGGACTTTGGAATCTGGCCTAAAAGCATGATTGGAAATATGATTGAGAATAGGCTGTaGTATATACTCCTGCACACC +
Preference number: 5 (lower is better)
Translates to: LDDIKDFGIWPKSMIGNMIENRL*YILLHT
Trigger: GGTGTGCAGGAGTATATACAACAGCCTATTCTCAAT...CATATTTCCAATCATGCTTTTAGGCCAGATTCCAAAGTCCTTAATGTCATCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369569.6
CDS-3UTR CAA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATCGTTCTTGCTTCATTTaGTTTCACAGAGATCTGCAT +
Preference number: 5 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNRSCFI*FHRDLH
Trigger: ATGCAGATCTCTGTGAAACAAAATGAAGCAAGAACG...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS-3UTR CAA 90 bp ATTTTCCACTCTCCTTTGTATCTGATATTATCTGGACTTACTGGCAGCTCTAATGAAAAATGGGGTCAATaGCCAATAGGAATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: IFHSPLYLILSGLTGSSNEKWGQ*PIGMKG
Trigger: TCCTTTCATTCCTATTGGCAATTGACCCCATTTTTC...ATTAGAGCTGCCAGTAAGTCCAGATAATATCAGATACAAAGGAGAGTGGAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS GCA 72 bp CCCGCCCCCTTGTCAAGAGACCAAACAGAAGACCGCTaGCGGTCTCCCCGCGAGCGAGCGCTAAGCGTAGTC +
Preference number: 6 (lower is better)
Translates to: PAPLSRDQTEDR*RSPRERALSVV
Trigger: GACTACGCTTAGCGCTCGCTCGCGGGGAGACCGGCAGCGGTCTTCTGTTTGGTCTCTTGACAAGGGGGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369564.5
CDS CAA 90 bp ATCGCGGATAGGCCCAATCTTGCTTTCTGCGGAAGTCCCGCCCCCTaGTCAAGAGACCAAACAGAAGACCGCTGCCGGTCTCCCCGCGAG +
Preference number: 6 (lower is better)
Translates to: IADRPNLAFCGSPAP*SRDQTEDRCRSPRE
Trigger: CTCGCGGGGAGACCGGCAGCGGTCTTCTGTTTGGTCTCTTGACAAGGGGGCGGGACTTCCGCAGAAAGCAAGATTGGGCCTATCCGCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369564.5
CDS CAA 72 bp CCCTCCACGCCGTTCTCATCGCGGATAGGCCCAATCTaGCTTTCTGCGGAAGTCCCGCCCCCTTGTCAAGAG +
Preference number: 6 (lower is better)
Translates to: PSTPFSSRIGPI*LSAEVPPPCQE
Trigger: CTCTTGACAAGGGGGCGGGACTTCCGCAGAAAGCAAGATTGGGCCTATCCGCGATGAGAACGGCGTGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369564.5
CDS GCA 72 bp CCTGGCAATGCCACCTATGGCAAAGATGGCAGCCTGTaGAAAGTCCGCAGACACATCCGTGCAGTACCCTCG +
Preference number: 6 (lower is better)
Translates to: PGNATYGKDGSL*KVRRHIRAVPS
Trigger: CGAGGGTACTGCACGGATGTGTCTGCGGACTTTGCACAGGCTGCCATCTTTGCCATAGGTGGCATTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000479285.5
CDS CAA 72 bp AGGCCCAATCTTGCTTTCTGCGGAAGTCCCGCCCCCTaGTCAAGAGACCAAACAGAAGACCGCTGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: RPNLAFCGSPAP*SRDQTEDRCRS
Trigger: AGACCGGCAGCGGTCTTCTGTTTGGTCTCTTGACAAGGGGGCGGGACTTCCGCAGAAAGCAAGATTGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369564.5
CDS CAA 90 bp CGTAACGCCAGCCCTCGCACCATTGGATTGGGGTCTGAGCAGTCTTaGCACAGCGTATTGATGGCCAGGAGAGCCAGATCTGGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: RNASPRTIGLGSEQS*HSVLMARRARSGFR
Trigger: CCTGAAACCAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAGGGCTGGCGTTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489499.5
CDS CAA 90 bp CTGAGGCTACACATGCTCCGTAACGCCAGCCCTCGCACCATTGGATaGGGGTCTGAGCAGTCTTTGCACAGCGTATTGATGGCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: LRLHMLRNASPRTIG*GSEQSLHSVLMARR
Trigger: TCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAGGGCTGGCGTTACGGAGCATGTGTAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489092.5
ENST00000489499.5
CDS CAA 90 bp CTTAATTCCCCCTCCACGCCGTTCTCATCGCGGATAGGCCCAATCTaGCTTTCTGCGGAAGTCCCGCCCCCTTGTCAAGAGACCAAACAG +
Preference number: 6 (lower is better)
Translates to: LNSPSTPFSSRIGPI*LSAEVPPPCQETKQ
Trigger: CTGTTTGGTCTCTTGACAAGGGGGCGGGACTTCCGCAGAAAGCAAGATTGGGCCTATCCGCGATGAGAACGGCGTGGAGGGGGAATTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369564.5
CDS GCA 72 bp GCCGTTCTCATCGCGGATAGGCCCAATCTTGCTTTCTaGGGAAGTCCCGCCCCCTTGTCAAGAGACCAAACA +
Preference number: 6 (lower is better)
Translates to: AVLIADRPNLAF*GSPAPLSRDQT
Trigger: TGTTTGGTCTCTTGACAAGGGGGCGGGACTTCCGCAGAAAGCAAGATTGGGCCTATCCGCGATGAGAACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369564.5
CDS CAA 72 bp GGCTACACATGCTCCGTAACGCCAGCCCTCGCACCATaGGATTGGGGTCTGAGCAGTCTTTGCACAGCGTAT +
Preference number: 6 (lower is better)
Translates to: GYTCSVTPALAP*DWGLSSLCTAY
Trigger: ATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAGGGCTGGCGTTACGGAGCATGTGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489092.5
ENST00000489499.5
CDS CAA 90 bp CAACGCTCTGCCCCCTGGCATTTAGAGATAGTTGCCCAGTGGGCTTaGCCATACACTGGCACCAGTGTGTTGAAGTCTGAGGCCCAGCTA +
Preference number: 6 (lower is better)
Translates to: QRSAPWHLEIVAQWA*PYTGTSVLKSEAQL
Trigger: TAGCTGGGCCTCAGACTTCAACACACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAACTATCTCTAAATGCCAGGGGGCAGAGCGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS CAA 90 bp CGTAACGCCAGCCCTCGCACCATTGGATTGGGGTCTGAGCAGTCTTaGCACAGCGTATTGATGGCCAGGAGAGCCAGATCTAATCACTCG +
Preference number: 6 (lower is better)
Translates to: RNASPRTIGLGSEQS*HSVLMARRARSNHS
Trigger: CGAGTGATTAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAGGGCTGGCGTTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489092.5
CDS GCA 72 bp TCCGTGCAGTACCCTCGAAGCTCCTCTAGCACCTGCTaGACATTCTCATCGTTCACCAGTTCACACAGCACC +
Preference number: 6 (lower is better)
Translates to: SVQYPRSSSSTC*TFSSFTSSHST
Trigger: GGTGCTGTGTGAACTGGTGAACGATGAGAATGTGCAGCAGGTGCTAGAGGAGCTTCGAGGGTACTGCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000479285.5
ENST00000489499.5
CDS CCA 72 bp GCCAGTATCATCCTGAGCACTGAGGTATGCTTTCCATaGCCGAGACCCAGCCCTACTCATTGCGATGGTCTG +
Preference number: 6 (lower is better)
Translates to: ASIILSTEVCFP*PRPSPTHCDGL
Trigger: CAGACCATCGCAATGAGTAGGGCTGGGTCTCGGCCATGGAAAGCATACCTCAGTGCTCAGGATGATACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS CAA 72 bp AGCCCTCGCACCATTGGATTGGGGTCTGAGCAGTCTTaGCACAGCGTATTGATGGCCAGGAGAGCCAGATCT +
Preference number: 6 (lower is better)
Translates to: SPRTIGLGSEQS*HSVLMARRARS
Trigger: AGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489092.5
ENST00000489499.5
CDS CAA 72 bp CGGCTCTCTGAAGAACAGGCAGCTAGCAAAGGTCCCTaGACCCGCACAAGGACATCAGTTTGTACGTGGGGA +
Preference number: 6 (lower is better)
Translates to: RLSEEQAASKGP*TRTRTSVCTWG
Trigger: TCCCCACGTACAAACTGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAGCTGCCTGTTCTTCAGAGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000432415.5
ENST00000479285.5
ENST00000489092.5
ENST00000489499.5
CDS CAA 90 bp CCTCGCACCATTGGATTGGGGTCTGAGCAGTCTTTGCACAGCGTATaGATGGCCAGGAGAGCCAGATCTGGTTTCAGGGGAGCATATGTG +
Preference number: 6 (lower is better)
Translates to: PRTIGLGSEQSLHSV*MARRARSGFRGAYV
Trigger: CACATATGCTCCCCTGAAACCAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489499.5
CDS CAA 90 bp GAGATAGTTGCCCAGTGGGCTTTGCCATACACTGGCACCAGTGTGTaGAAGTCTGAGGCCCAGCTATTCACAGGTCTTTCTGCCGGATCC +
Preference number: 6 (lower is better)
Translates to: EIVAQWALPYTGTSV*KSEAQLFTGLSAGS
Trigger: GGATCCGGCAGAAAGACCTGTGAATAGCTGGGCCTCAGACTTCAACACACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAACTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS TCA 72 bp TTGGATTGGGGTCTGAGCAGTCTTTGCACAGCGTATTaGTGGCCAGGAGAGCCAGATCTGGTTTCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: LDWGLSSLCTAY*WPGEPDLVSGE
Trigger: CTCCCCTGAAACCAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489499.5
CDS TCA 72 bp GGCTCTCTGAAGAACAGGCAGCTAGCAAAGGTCCCTTaGCCCGCACAAGGACATCAGTTTGTACGTGGGGAA +
Preference number: 6 (lower is better)
Translates to: GSLKNRQLAKVP*PAQGHQFVRGE
Trigger: TTCCCCACGTACAAACTGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAGCTGCCTGTTCTTCAGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000432415.5
ENST00000479285.5
ENST00000489092.5
ENST00000489499.5
CDS TCA 72 bp CCCAGTGGGCTTTGCCATACACTGGCACCAGTGTGTTaGAGTCTGAGGCCCAGCTATTCACAGGTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: PSGLCHTLAPVC*SLRPSYSQVFL
Trigger: CAGAAAGACCTGTGAATAGCTGGGCCTCAGACTTCAACACACTGGTGCCAGTGTATGGCAAAGCCCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS GCA 72 bp TCCGGTAGCGCAGCCTATCAGCTTGAATGTGAGGATTaGACAGAGCCTTCTTCAGCTCCTTCACCACGTCCT +
Preference number: 6 (lower is better)
Translates to: SGSAAYQLECED*TEPSSAPSPRP
Trigger: AGGACGTGGTGAAGGAGCTGAAGAAGGCTCTGTGCAATCCTCACATTCAAGCTGATAGGCTGCGCTACCGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000369571.2
ENST00000432415.5
ENST00000484201.5
ENST00000489092.5
ENST00000489499.5
CDS GCA 72 bp ACATCCGTGCAGTACCCTCGAAGCTCCTCTAGCACCTaGTGCACATTCTCATCGTTCACCAGTTCACACAGC +
Preference number: 6 (lower is better)
Translates to: TSVQYPRSSSST*CTFSSFTSSHS
Trigger: GCTGTGTGAACTGGTGAACGATGAGAATGTGCAGCAGGTGCTAGAGGAGCTTCGAGGGTACTGCACGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000479285.5
ENST00000489499.5
CDS CAA 72 bp GCCCAGTGGGCTTTGCCATACACTGGCACCAGTGTGTaGAAGTCTGAGGCCCAGCTATTCACAGGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: AQWALPYTGTSV*KSEAQLFTGLS
Trigger: AGAAAGACCTGTGAATAGCTGGGCCTCAGACTTCAACACACTGGTGCCAGTGTATGGCAAAGCCCACTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS CAA 72 bp GCCCCCTGGCATTTAGAGATAGTTGCCCAGTGGGCTTaGCCATACACTGGCACCAGTGTGTTGAAGTCTGAG +
Preference number: 6 (lower is better)
Translates to: APWHLEIVAQWA*PYTGTSVLKSE
Trigger: CTCAGACTTCAACACACTGGTGCCAGTGTATGGCAAAGCCCACTGGGCAACTATCTCTAAATGCCAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS TCA 72 bp CTGTTAAGAACAGACAGCCAGTATCATCCTGAGCACTaGGGTATGCTTTCCATGGCCGAGACCCAGCCCTAC +
Preference number: 6 (lower is better)
Translates to: LLRTDSQYHPEH*GMLSMAETQPY
Trigger: GTAGGGCTGGGTCTCGGCCATGGAAAGCATACCTCAGTGCTCAGGATGATACTGGCTGTCTGTTCTTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS CAA 72 bp TCGCTGGATGACATTCCGGTAGCGCAGCCTATCAGCTaGAATGTGAGGATTGCACAGAGCCTTCTTCAGCTC +
Preference number: 6 (lower is better)
Translates to: SLDDIPVAQPIS*NVRIAQSLLQL
Trigger: GAGCTGAAGAAGGCTCTGTGCAATCCTCACATTCAAGCTGATAGGCTGCGCTACCGGAATGTCATCCAGCGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000369571.2
ENST00000432415.5
ENST00000484201.5
ENST00000489092.5
ENST00000489499.5
CDS CAA 72 bp ATTGGATTGGGGTCTGAGCAGTCTTTGCACAGCGTATaGATGGCCAGGAGAGCCAGATCTGGTTTCAGGGGA +
Preference number: 6 (lower is better)
Translates to: IGLGSEQSLHSV*MARRARSGFRG
Trigger: TCCCCTGAAACCAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489499.5
CDS CAA 72 bp AGGGCTCCAGAATCAGGGAGTTCTTGTACCCTCTCCTaGTTCTCTTCAGGAATCAAGGGTCCTGATGCGGCA +
Preference number: 6 (lower is better)
Translates to: RAPESGSSCTLS*FSSGIKGPDAA
Trigger: TGCCGCATCAGGACCCTTGATTCCTGAAGAGAACAAGGAGAGGGTACAAGAACTCCCTGATTCTGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS CAA 90 bp CCTAATCACTCGCTGGATGACATTCCGGTAGCGCAGCCTATCAGCTaGAATGTGAGGATTGCACAGAGCCTTCTTCAGCTCCTTCACCAC +
Preference number: 6 (lower is better)
Translates to: PNHSLDDIPVAQPIS*NVRIAQSLLQLLHH
Trigger: GTGGTGAAGGAGCTGAAGAAGGCTCTGTGCAATCCTCACATTCAAGCTGATAGGCTGCGCTACCGGAATGTCATCCAGCGAGTGATTAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000484201.5
ENST00000489499.5
CDS CAA 90 bp CCTCGCACCATTGGATTGGGGTCTGAGCAGTCTTTGCACAGCGTATaGATGGCCAGGAGAGCCAGATCTAATCACTCGCTGGATGACATT +
Preference number: 6 (lower is better)
Translates to: PRTIGLGSEQSLHSV*MARRARSNHSLDDI
Trigger: AATGTCATCCAGCGAGTGATTAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAATGGTGCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489092.5
CDS CAA 90 bp CAGAGCTCACGGCTCTCTGAAGAACAGGCAGCTAGCAAAGGTCCCTaGACCCGCACAAGGACATCAGTTTGTACGTGGGGAAACATTTTT +
Preference number: 6 (lower is better)
Translates to: QSSRLSEEQAASKGP*TRTRTSVCTWGNIF
Trigger: AAAAATGTTTCCCCACGTACAAACTGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAGCTGCCTGTTCTTCAGAGAGCCGTGAGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000432415.5
ENST00000479285.5
ENST00000489092.5
ENST00000489499.5
CDS CAA 90 bp TCTAATCACTCGCTGGATGACATTCCGGTAGCGCAGCCTATCAGCTaGAATGTGAGGATTGCACAGAGCCTTCTTCAGCTCCTTCACCAC +
Preference number: 6 (lower is better)
Translates to: SNHSLDDIPVAQPIS*NVRIAQSLLQLLHH
Trigger: GTGGTGAAGGAGCTGAAGAAGGCTCTGTGCAATCCTCACATTCAAGCTGATAGGCTGCGCTACCGGAATGTCATCCAGCGAGTGATTAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369567.5
ENST00000432415.5
ENST00000489092.5
CDS TCA 72 bp CTTGGCACATCCAAGGACTGCCACTCTCCTGACATATaGAGCCTTATCCCGCAGACCATTGAGAATAGGCTG +
Preference number: 6 (lower is better)
Translates to: LGTSKDCHSPDI*SLIPQTIENRL
Trigger: CAGCCTATTCTCAATGGTCTGCGGGATAAGGCTTCATATGTCAGGAGAGTGGCAGTCCTTGGATGTGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000472122.1
ENST00000484201.5
ENST00000489092.5
ENST00000489499.5
CDS GCA 72 bp CGCAGACCATTGAGAATAGGCTGTTGTATATACTCCTaGACACCAGGCATCCTGAGGCTACACATGCTCCGT +
Preference number: 6 (lower is better)
Translates to: RRPLRIGCCIYS*TPGILRLHMLR
Trigger: ACGGAGCATGTGTAGCCTCAGGATGCCTGGTGTGCAGGAGTATATACAACAGCCTATTCTCAATGGTCTGCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489092.5
ENST00000489499.5
CDS CAA 72 bp ATTGGATTGGGGTCTGAGCAGTCTTTGCACAGCGTATaGATGGCCAGGAGAGCCAGATCTAATCACTCGCTG +
Preference number: 6 (lower is better)
Translates to: IGLGSEQSLHSV*MARRARSNHSL
Trigger: CAGCGAGTGATTAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAAGACTGCTCAGACCCCAATCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489092.5
CDS CAA 90 bp AGGACTGCCACTCTCCTGACATATGAAGCCTTATCCCGCAGACCATaGAGAATAGGCTGTTGTATATACTCCTGCACACCAGGCATCCTG +
Preference number: 6 (lower is better)
Translates to: RTATLLTYEALSRRP*RIGCCIYSCTPGIL
Trigger: CAGGATGCCTGGTGTGCAGGAGTATATACAACAGCCTATTCTCAATGGTCTGCGGGATAAGGCTTCATATGTCAGGAGAGTGGCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489092.5
ENST00000489499.5
CDS CAA 90 bp ACTAGCATGAGGGCTCCAGAATCAGGGAGTTCTTGTACCCTCTCCTaGTTCTCTTCAGGAATCAAGGGTCCTGATGCGGCAAAGGATGAA +
Preference number: 6 (lower is better)
Translates to: TSMRAPESGSSCTLS*FSSGIKGPDAAKDE
Trigger: TTCATCCTTTGCCGCATCAGGACCCTTGATTCCTGAAGAGAACAAGGAGAGGGTACAAGAACTCCCTGATTCTGGAGCCCTCATGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
CDS TCA 72 bp AGCAGTTCTGTTAAGAACAGACAGCCAGTATCATCCTaGGCACTGAGGTATGCTTTCCATGGCCGAGACCCA +
Preference number: 6 (lower is better)
Translates to: SSSVKNRQPVSS*ALRYAFHGRDP
Trigger: TGGGTCTCGGCCATGGAAAGCATACCTCAGTGCTCAGGATGATACTGGCTGTCTGTTCTTAACAGAACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS GCA 72 bp TACTATGAAAAAGTCTATGGCAAAGATGGCAGCCTGTaGAAAGTCCGCAGACACATCCGTGCAGTACCCTCG +
Preference number: 6 (lower is better)
Translates to: YYEKVYGKDGSL*KVRRHIRAVPS
Trigger: CGAGGGTACTGCACGGATGTGTCTGCGGACTTTGCACAGGCTGCCATCTTTGCCATAGACTTTTTCATAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460653.1
CDS CAA 90 bp AGGACTGCCACTCTCCTGACATATGAAGCCTTATCCCGCAGACCATaGAGAATAGGCTGTTGTATATACTCCTGCACACCAGGCATCCTA +
Preference number: 6 (lower is better)
Translates to: RTATLLTYEALSRRP*RIGCCIYSCTPGIL
Trigger: TAGGATGCCTGGTGTGCAGGAGTATATACAACAGCCTATTCTCAATGGTCTGCGGGATAAGGCTTCATATGTCAGGAGAGTGGCAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369564.5
ENST00000472122.1
ENST00000484201.5
CDS GCA 72 bp CGCAGACCATTGAGAATAGGCTGTTGTATATACTCCTaGACACCAGGCATCCTAATCACTCGCTGGATGACA +
Preference number: 6 (lower is better)
Translates to: RRPLRIGCCIYS*TPGILITRWMT
Trigger: TGTCATCCAGCGAGTGATTAGGATGCCTGGTGTGCAGGAGTATATACAACAGCCTATTCTCAATGGTCTGCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369564.5
ENST00000484201.5
CDS GCA 72 bp CGCAGACCATTGAGAATAGGCTGTTGTATATACTCCTaGACACCAGGCATCCTAAGCAACACATCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RRPLRIGCCIYS*TPGILSNTSWS
Trigger: ACTCCAGGATGTGTTGCTTAGGATGCCTGGTGTGCAGGAGTATATACAACAGCCTATTCTCAATGGTCTGCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472122.1
CDS CCA 72 bp TTTGCACAGCGTATTGATGGCCAGGAGAGCCAGATCTaGTTTCAGGGGAGCATATGTGCACATGTACAGATA +
Preference number: 6 (lower is better)
Translates to: FAQRIDGQESQI*FQGSICAHVQI
Trigger: TATCTGTACATGTGCACATATGCTCCCCTGAAACCAGATCTGGCTCTCCTGGCCATCAATACGCTGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256658.8
ENST00000369569.6
ENST00000369571.2
ENST00000489499.5
CDS CAA 72 bp GGTGTCAGGATGGAATTCTCCCCGCCAAGGCAACACTaGCTGATGAGCAACTTTAAGGCTAAGCCAAGTTTT +
Preference number: 6 (lower is better)
Translates to: GVRMEFSPPRQH*LMSNFKAKPSF
Trigger: AAAACTTGGCTTAGCCTTAAAGTTGCTCATCAGCAAGTGTTGCCTTGGCGGGGAGAATTCCATCCTGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
CDS CAA 72 bp AGGGCTCCAGAATCAGGGAGTTCTTGTACCCTCTCCTaGTTCTCTTCAGGAATCAAGGGTCCTAAAAGAGAC +
Preference number: 6 (lower is better)
Translates to: RAPESGSSCTLS*FSSGIKGPKRD
Trigger: GTCTCTTTTAGGACCCTTGATTCCTGAAGAGAACAAGGAGAGGGTACAAGAACTCCCTGATTCTGGAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462591.1
ENST00000479285.5
CDS CCA 72 bp GCGCAGCAAAGCAGTGAGCAGCTCCATCTTAACAGCTaGAAATGTTTCCGACTTCACATTCTCAACAAAGTC +
Preference number: 6 (lower is better)
Translates to: AQQSSEQLHLNS*KCFRLHILNKV
Trigger: GACTTTGTTGAGAATGTGAAGTCGGAAACATTTCCAGCTGTTAAGATGGAGCTGCTCACTGCTTTGCTGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256658.8
ENST00000369567.5
ENST00000369569.6
ENST00000462591.1
ENST00000479285.5
ENST00000479801.1
CDS CCA 72 bp CGTAGCAGAAAGTTCAATACTTCAGCCTGGCCCCATTaGTCCAGTTTTGACATTCTAATCACTCGCTGGATG +
Preference number: 6 (lower is better)
Translates to: RSRKFNTSAWPH*SSFDILITRWM
Trigger: CATCCAGCGAGTGATTAGAATGTCAAAACTGGACCAATGGGGCCAGGCTGAAGTATTGAACTTTCTGCTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369567.5
ENST00000432415.5
CDS CAA 72 bp CCTGGGCTACTGCTCTTGAGGAAACTATCCAACAGATaGAGAATGTCAAATAGTTCTTCCTCACTGCGGGGT +
Preference number: 6 (lower is better)
Translates to: PGLLLLRKLSNR*RMSNSSSSLRG
Trigger: ACCCCGCAGTGAGGAAGAACTATTTGACATTCTCAATCTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000369571.2
ENST00000432415.5
ENST00000489092.5
ENST00000489499.5
CDS CAA 90 bp ACTAGCATGAGGGCTCCAGAATCAGGGAGTTCTTGTACCCTCTCCTaGTTCTCTTCAGGAATCAAGGGTCCTAAAAGAGACAGAAAACTT +
Preference number: 6 (lower is better)
Translates to: TSMRAPESGSSCTLS*FSSGIKGPKRDRKL
Trigger: AAGTTTTCTGTCTCTTTTAGGACCCTTGATTCCTGAAGAGAACAAGGAGAGGGTACAAGAACTCCCTGATTCTGGAGCCCTCATGCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462591.1
ENST00000479285.5
CDS GCA 72 bp AGCCCCTGTTCACCTAACAGATGGTTTAGTAGATGCTaGACCCATCAGATCATGAAGAATTGCAGAAAGCCT +
Preference number: 6 (lower is better)
Translates to: SPCSPNRWFSRC*THQIMKNCRKP
Trigger: AGGCTTTCTGCAATTCTTCATGATCTGATGGGTGCAGCATCTACTAAACCATCTGTTAGGTGAACAGGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472122.1
CDS GCA 72 bp CTCAGCCCCTGTTCACCTAACAGATGGTTTAGTAGATaGTGCACCCATCAGATCATGAAGAATTGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: LSPCSPNRWFSR*CTHQIMKNCRK
Trigger: CTTTCTGCAATTCTTCATGATCTGATGGGTGCAGCATCTACTAAACCATCTGTTAGGTGAACAGGGGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472122.1
CDS CCA 72 bp GATCAGAAAAAGTTTGGTAGCTCCCATCACCACACCTaGGCTACTGCTCTTGAGGAAACTATCCAACAGATT +
Preference number: 6 (lower is better)
Translates to: DQKKFGSSHHHT*ATALEETIQQI
Trigger: AATCTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGAGCTACCAAACTTTTTCTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000369571.2
ENST00000432415.5
ENST00000489092.5
ENST00000489499.5
CDS CCA 72 bp ATAAGGTTTCCTCAGGTTTGGGGCCTTTGGCCCTATTaGGTTTTAGTGTTTCAGTGGAAGCTGCTCAAAGAA +
Preference number: 6 (lower is better)
Translates to: IRFPQVWGLWPY*VLVFQWKLLKE
Trigger: TTCTTTGAGCAGCTTCCACTGAAACACTAAAACCCAATAGGGCCAAAGGCCCCAAACCTGAGGAAACCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462591.1
CDS CCA 72 bp CGTAGCAGAAAGTTCAATACTTCAGCCTGGCCCCATTaGTCCAGTTTTGACATTCTACTTCAGAGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: RSRKFNTSAWPH*SSFDILLQSLH
Trigger: ATGGAGACTCTGAAGTAGAATGTCAAAACTGGACCAATGGGGCCAGGCTGAAGTATTGAACTTTCTGCTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489499.5
CDS CAA 72 bp ACTCTCCTGACATATGAAGCCTTATCCCGCAGACCATaGAGAATAGGCTGTTGTATATACTCCTGCACACCA +
Preference number: 6 (lower is better)
Translates to: TLLTYEALSRRP*RIGCCIYSCTP
Trigger: TGGTGTGCAGGAGTATATACAACAGCCTATTCTCAATGGTCTGCGGGATAAGGCTTCATATGTCAGGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000472122.1
ENST00000484201.5
ENST00000489092.5
ENST00000489499.5
CDS CAA 72 bp TTGGTAGCTCCCATCACCACACCTGGGCTACTGCTCTaGAGGAAACTATCCAACAGATTGAGAATGTCAAAT +
Preference number: 6 (lower is better)
Translates to: LVAPITTPGLLL*RKLSNRLRMSN
Trigger: ATTTGACATTCTCAATCTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGAGCTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000369571.2
ENST00000432415.5
ENST00000489092.5
ENST00000489499.5
CDS CAA 72 bp AATAAGGTTTCCTCAGGTTTGGGGCCTTTGGCCCTATaGGGTTTTAGTGTTTCAGTGGAAGCTGCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: NKVSSGLGPLAL*GFSVSVEAAQR
Trigger: TCTTTGAGCAGCTTCCACTGAAACACTAAAACCCAATAGGGCCAAAGGCCCCAAACCTGAGGAAACCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462591.1
CDS CAA 72 bp TCTGGGCTACTGCTCTTGAGGAAACTATCCAACAGATaGAGAATGTCAAATAGTTCTTCCTCACTGCGGGGT +
Preference number: 6 (lower is better)
Translates to: SGLLLLRKLSNR*RMSNSSSSLRG
Trigger: ACCCCGCAGTGAGGAAGAACTATTTGACATTCTCAATCTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484201.5
CDS TCA 72 bp CATTGGTCCAGTTTTGACATTCGATTTAAGAGATGGTaGGCAATGGGCTTATTGATGACAACGCCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: HWSSFDIRFKRW*AMGLLMTTPPS
Trigger: GGAAGGAGGCGTTGTCATCAATAAGCCCATTGCTCACCATCTCTTAAATCGAATGTCAAAACTGGACCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000472122.1
ENST00000484201.5
ENST00000489092.5
CDS CAA 90 bp AGAAAAAGTTTGGTAGCTCCCATCACCACACCTGGGCTACTGCTCTaGAGGAAACTATCCAACAGATTGAGAATGTCAAATAGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: RKSLVAPITTPGLLL*RKLSNRLRMSNSSS
Trigger: GGAAGAACTATTTGACATTCTCAATCTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGAGCTACCAAACTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369567.5
ENST00000369569.6
ENST00000369571.2
ENST00000432415.5
ENST00000489092.5
ENST00000489499.5
CDS CCA 72 bp AGAGACCTCAAGCAGTTCACAACTACAATTGGATCCTaGTCACGCAGCAAACTGTATAATTCATTTACCAGG +
Preference number: 6 (lower is better)
Translates to: RDLKQFTTTIGS*SRSKLYNSFTR
Trigger: CCTGGTAAATGAATTATACAGTTTGCTGCGTGACCAGGATCCAATTGTAGTTGTGAACTGCTTGAGGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000472122.1
ENST00000484201.5
ENST00000489092.5
CDS CAA 90 bp GTTTCAGAATTTCCTCTAGAGACCTCAAGCAGTTCACAACTACAATaGGATCCTGGTCACGCAGCAAACTGTATAATTCATTTACCAGGG +
Preference number: 6 (lower is better)
Translates to: VSEFPLETSSSSQLQ*DPGHAANCIIHLPG
Trigger: CCCTGGTAAATGAATTATACAGTTTGCTGCGTGACCAGGATCCAATTGTAGTTGTGAACTGCTTGAGGTCTCTAGAGGAAATTCTGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000472122.1
ENST00000484201.5
ENST00000489092.5
CDS CAA 72 bp TTTCCTCTAGAGACCTCAAGCAGTTCACAACTACAATaGGATCCTGGTCACGCAGCAAACTGTATAATTCAT +
Preference number: 6 (lower is better)
Translates to: FPLETSSSSQLQ*DPGHAANCIIH
Trigger: ATGAATTATACAGTTTGCTGCGTGACCAGGATCCAATTGTAGTTGTGAACTGCTTGAGGTCTCTAGAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256658.8
ENST00000369564.5
ENST00000369569.6
ENST00000369571.2
ENST00000472122.1
ENST00000484201.5
ENST00000489092.5
CDS TCA 72 bp TCTTGCTCACAAATGCTTCAAATTCAGGCAACAGTCTaGGGTTTAGTGCTAAGATACTCTACTTTCCACCAA +
Preference number: 6 (lower is better)
Translates to: SCSQMLQIQATV*GLVLRYSTFHQ
Trigger: TTGGTGGAAAGTAGAGTATCTTAGCACTAAACCTCAGACTGTTGCCTGAATTTGAAGCATTTGTGAGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462591.1
ENST00000479285.5
CDS CCA 72 bp TTTATATGCCATCTATATCCAAAAGAGAATCTAAGGTaGCAATCAATTCGAAGAGTGCCCACTTCAAACACA +
Preference number: 6 (lower is better)
Translates to: FICHLYPKENLR*QSIRRVPTSNT
Trigger: TGTGTTTGAAGTGGGCACTCTTCGAATTGATTGCCACCTTAGATTCTCTTTTGGATATAGATGGCATATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462591.1
CDS TCA 72 bp TTTTTACTATGGGTCATGGCAAATACTATTTCCTTCTaGAAAACCCACCTATGCAGTAATACAACAAACGTC +
Preference number: 6 (lower is better)
Translates to: FLLWVMANTISF*KTHLCSNTTNV
Trigger: GACGTTTGTTGTATTACTGCATAGGTGGGTTTTTCAGAAGGAAATAGTATTTGCCATGACCCATAGTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479285.5
ENST00000479801.1