RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP3S2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157823

Ensembl transcript IDs: ENST00000336418.9, ENST00000423566.6, ENST00000557999.5, ENST00000558011.5, ENST00000558186.1, ENST00000558806.5, ENST00000558999.5, ENST00000559601.2, ENST00000560184.5, ENST00000560251.1, ENST00000560771.5, ENST00000560940.5, ENST00000561410.5, ENST00000617003.1

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCATGGGAAAGGTACGCTGAGCAAGGGCGGGCAGTGCCAGGGCTaGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGA +
Preference number: 1 (lower is better)
Translates to: CHGKGTLSKGGQCQG*GATVQGDGEALLPG
Trigger: TCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTGGCACTGCCCGCCCTTGCTCAGCGTACCTTTCCCATGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp CTCCTAGTCGCAGCCAGCGTGCGTCATGTCCAGGCCCCACAAGGGTaGCCCTGGCTCAGGTTCTCATGCTCCAGAAGCTGGCCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: LLVAASVRHVQAPQG*PWLRFSCSRSWPRW
Trigger: CCACCTGGGCCAGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACATGACGCACGCTGGCTGCGACTAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 90 bp CCTGCAAGCACGGACCCCGTGCTGGTGTGTGAGTGCAGCACACACTaGGCTAACCATCACCACAGTGAGACTGGCACCCTCTGGGGTAGG +
Preference number: 1 (lower is better)
Translates to: PASTDPVLVCECSTH*ANHHHSETGTLWGR
Trigger: CCTACCCCAGAGGGTGCCAGTCTCACTGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTCACACACCAGCACGGGGTCCGTGCTTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp AGCATCCACCAGCCTGCAAGCACGGACCCCGTGCTGGTGTGTGAGTaGAGCACACACTGGGCTAACCATCACCACAGTGAGACTGGCACC +
Preference number: 1 (lower is better)
Translates to: SIHQPASTDPVLVCE*STHWANHHHSETGT
Trigger: GGTGCCAGTCTCACTGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTCACACACCAGCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 90 bp ACCCAGAGGACAGCATCCACCAGCCTGCAAGCACGGACCCCGTGCTaGTGTGTGAGTGCAGCACACACTGGGCTAACCATCACCACAGTG +
Preference number: 1 (lower is better)
Translates to: TQRTASTSLQARTPC*CVSAAHTGLTITTV
Trigger: CACTGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTCACACACCAGCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTGTCCTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp GAAACCAAACATCCAGTACGTCAGAGTGCCATGGGAAAGGTACGCTaGGCAAGGGCGGGCAGTGCCAGGGCTGGGGTGCCACTGTACAGG +
Preference number: 1 (lower is better)
Translates to: ETKHPVRQSAMGKVR*ARAGSARAGVPLYR
Trigger: CCTGTACAGTGGCACCCCAGCCCTGGCACTGCCCGCCCTTGCTCAGCGTACCTTTCCCATGGCACTCTGACGTACTGGATGTTTGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp GCGCTGTTCAAAAATGGAAAACAAGGTGGCCCTGACACCGGGTGCTaGTGGGCACCCTCTCAGACCTGCCCTGCAACAGCATCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: ALFKNGKQGGPDTGC*WAPSQTCPATASGG
Trigger: GCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTTGAACAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp CAAACCACAGGGAGCGCTGTTCAAAAATGGAAAACAAGGTGGCCCTaGCACCGGGTGCTGCTGGGCACCCTCTCAGACCTGCCCTGCAAC +
Preference number: 1 (lower is better)
Translates to: QTTGSAVQKWKTRWP*HRVLLGTLSDLPCN
Trigger: GTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTTGAACAGCGCTCCCTGTGGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp GGAGCGCTGTTCAAAAATGGAAAACAAGGTGGCCCTGACACCGGGTaGTGCTGGGCACCCTCTCAGACCTGCCCTGCAACAGCATCAGGA +
Preference number: 1 (lower is better)
Translates to: GALFKNGKQGGPDTG*CWAPSQTCPATASG
Trigger: TCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTTGAACAGCGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp TTAACCCAGAGGACAGCATCCACCAGCCTGCAAGCACGGACCCCGTaGTGGTGTGTGAGTGCAGCACACACTGGGCTAACCATCACCACA +
Preference number: 1 (lower is better)
Translates to: LTQRTASTSLQARTP*WCVSAAHTGLTITT
Trigger: TGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTCACACACCAGCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTGTCCTCTGGGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp AAGGTGCTCAGCCCTAGTGAGGAGGTTCTGGGAAGCAGGTGGGCCTaGTCAATGCAGTCCCTAACCCTTGGGAGCATCCATGTGAGAGGT +
Preference number: 1 (lower is better)
Translates to: KVLSPSEEVLGSRWA*SMQSLTLGSIHVRG
Trigger: ACCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGCATTGAGCAGGCCCACCTGCTTCCCAGAACCTCCTCACTAGGGCTGAGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CCA 90 bp TCAGAGAAGGTGCTCAGCCCTAGTGAGGAGGTTCTGGGAAGCAGGTaGGCCTGCTCAATGCAGTCCCTAACCCTTGGGAGCATCCATGTG +
Preference number: 1 (lower is better)
Translates to: SEKVLSPSEEVLGSR*ACSMQSLTLGSIHV
Trigger: CACATGGATGCTCCCAAGGGTTAGGGACTGCATTGAGCAGGCCCACCTGCTTCCCAGAACCTCCTCACTAGGGCTGAGCACCTTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR TCA 90 bp CAGAAAGAACATTTATGGGCGCCTAAGCCCTGGGAGAATGGCACCTaGGGGAACAGAGCGTGCCCACAAGCAGACCTTGGGGAGGGAGAA +
Preference number: 1 (lower is better)
Translates to: QKEHLWAPKPWENGT*GNRACPQADLGEGE
Trigger: TTCTCCCTCCCCAAGGTCTGCTTGTGGGCACGCTCTGTTCCCTCAGGTGCCATTCTCCCAGGGCTTAGGCGCCCATAAATGTTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp GTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGACTCCCTACTaGGGAAGGCAGGGCCCCTCACATCTGCAGTGGCCGTATGCATCA +
Preference number: 1 (lower is better)
Translates to: VRGKGANDLGMLTPY*GRQGPSHLQWPYAS
Trigger: TGATGCATACGGCCACTGCAGATGTGAGGGGCCCTGCCTTCCTCAGTAGGGAGTCAACATGCCCAAGTCATTTGCACCTTTACCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR TCA 90 bp TTACTGCGAAGCAGCCCTCATCTTAAGGTGGCTCAACACCACACCTaGGATCTAGCCCATGCGACAGTATGGAAGCAGGAGGCCCTACTC +
Preference number: 1 (lower is better)
Translates to: LLRSSPHLKVAQHHT*DLAHATVWKQEALL
Trigger: GAGTAGGGCCTCCTGCTTCCATACTGTCGCATGGGCTAGATCTCAGGTGTGGTGTTGAGCCACCTTAAGATGAGGGCTGCTTCGCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp CCCCTCACATCTGCAGTGGCCGTATGCATCAGAGAACGGCATGACTaGACATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAAT +
Preference number: 1 (lower is better)
Translates to: PLTSAVAVCIRERHD*TCENWVHPSSVNRN
Trigger: ATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTGCAGATGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR GCA 90 bp TCAGAAGTCTGTGGTGCTAAGGATGAAGACTCTACTCAGAGAAGGTaGTCAGCCCTAGTGAGGAGGTTCTGGGAAGCAGGTGGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: SEVCGAKDEDSTQRR*SALVRRFWEAGGPA
Trigger: AGCAGGCCCACCTGCTTCCCAGAACCTCCTCACTAGGGCTGAGCACCTTCTCTGAGTAGAGTCTTCATCCTTAGCACCACAGACTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CCA 90 bp GTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTaGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCA +
Preference number: 1 (lower is better)
Translates to: VAVCIRERHDCTCEN*VHPSSVNRNPFPIP
Trigger: TGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CCA 90 bp GAAAGCAATGGACAGACAGCCACGCTGAAAGCCCTTACTAGAGACTaGTCCACAAGATCAGATTTAGCTGCCCCTGGTTTGAGCCTTGCT +
Preference number: 1 (lower is better)
Translates to: ESNGQTATLKALTRD*STRSDLAAPGLSLA
Trigger: AGCAAGGCTCAAACCAGGGGCAGCTAAATCTGATCTTGTGGACCAGTCTCTAGTAAGGGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 90 bp AACTTTGATGTTGAGATCGCCAATGTTGATGTTCCGAGGAATCTCTaGCAGGTTGATGTTTTTCACAGCAGACACAGCCCGCGCAGGGGC +
Preference number: 1 (lower is better)
Translates to: NFDVEIANVDVPRNL*QVDVFHSRHSPRRG
Trigger: GCCCCTGCGCGGGCTGTGTCTGCTGTGAAAAACATCAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR TCA 90 bp TGTGCTTATCATGGAGCTTTCAAGAGTGAGGATCGGAGGCTGTATTaGGCAGTGGGCACAAACCACAGGGAGCGCTGTTCAAAAATGGAA +
Preference number: 1 (lower is better)
Translates to: CAYHGAFKSEDRRLY*AVGTNHRERCSKME
Trigger: TTCCATTTTTGAACAGCGCTCCCTGTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATCCTCACTCTTGAAAGCTCCATGATAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp CCACAAATTCAGGCTGCCAGTCCGATGCACTATATCCCAACAATCTaGGCACTCTGTCAAAGATGCTCACAGAGACAACAGGAGCAGACA +
Preference number: 1 (lower is better)
Translates to: PQIQAASPMHYIPTI*ALCQRCSQRQQEQT
Trigger: TGTCTGCTCCTGTTGTCTCTGTGAGCATCTTTGACAGAGTGCTCAGATTGTTGGGATATAGTGCATCGGACTGGCAGCCTGAATTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp GTCCTGCACATAACACCTGTGAGAATACAACTGGGACTAGGACAATaGGGGAAGCATATTCTTCATGAGGCGGTAACCAAAAGGCTTGGC +
Preference number: 1 (lower is better)
Translates to: VLHITPVRIQLGLGQ*GKHILHEAVTKRLG
Trigger: GCCAAGCCTTTTGGTTACCGCCTCATGAAGAATATGCTTCCCGCATTGTCCTAGTCCCAGTTGTATTCTCACAGGTGTTATGTGCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 90 bp ATCATGGAGCTTTCAAGAGTGAGGATCGGAGGCTGTATTGAGCAGTaGGCACAAACCACAGGGAGCGCTGTTCAAAAATGGAAAACAAGG +
Preference number: 1 (lower is better)
Translates to: IMELSRVRIGGCIEQ*AQTTGSAVQKWKTR
Trigger: CCTTGTTTTCCATTTTTGAACAGCGCTCCCTGTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATCCTCACTCTTGAAAGCTCCATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp AAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGCCAGTCCGATaGACTATATCCCAACAATCTGAGCACTCTGTCAAAGATGCTCAC +
Preference number: 1 (lower is better)
Translates to: KVTDCGLHKFRLPVR*TISQQSEHSVKDAH
Trigger: GTGAGCATCTTTGACAGAGTGCTCAGATTGTTGGGATATAGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp GAGAATACAACTGGGACTAGGACAATGCGGGAAGCATATTCTTCATaGGGCGGTAACCAAAAGGCTTGGCTATACCAAAGGATTCTGGTG +
Preference number: 1 (lower is better)
Translates to: ENTTGTRTMREAYSS*GGNQKAWLYQRILV
Trigger: CACCAGAATCCTTTGGTATAGCCAAGCCTTTTGGTTACCGCCTCATGAAGAATATGCTTCCCGCATTGTCCTAGTCCCAGTTGTATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp CCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTaGCAGTCCGATGCACTATATCCCAACAATCTGAGCACTCTGTCA +
Preference number: 1 (lower is better)
Translates to: PYITKLLTAVSTNSG*QSDALYPNNLSTLS
Trigger: TGACAGAGTGCTCAGATTGTTGGGATATAGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp AATGGAGGGACACAGACGACTCTTTGGCTCTTATACTCTATGACATaGTCACTGGCCACCTTAGAAAATCAAGCCTATTTAGACCACGGT +
Preference number: 1 (lower is better)
Translates to: NGGTQTTLWLLYSMT*SLATLENQAYLDHG
Trigger: ACCGTGGTCTAAATAGGCTTGATTTTCTAAGGTGGCCAGTGATCATGTCATAGAGTATAAGAGCCAAAGAGTCGTCTGTGTCCCTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 90 bp AGGCTTGACTCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGACGTaGTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAG +
Preference number: 1 (lower is better)
Translates to: RLDSSKAQNGFCFQT*LPCLSLLVLRTLFQ
Trigger: CTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR GCA 90 bp GGGTTACTGTCCTCTAAATATTCCATATATCACAAAGTTACTGACTaGGGTCTCCACAAATTCAGGCTGCCAGTCCGATGCACTATATCC +
Preference number: 1 (lower is better)
Translates to: GLLSSKYSIYHKVTD*GLHKFRLPVRCTIS
Trigger: GGATATAGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGGACAGTAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp TGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTaGTCCTCAGACAAACTGGGACAGGTTGGGAACTTTGATGTTGAG +
Preference number: 1 (lower is better)
Translates to: CLSLLVLRTLFQANT*SSDKLGQVGNFDVE
Trigger: CTCAACATCAAAGTTCCCAACCTGTCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR TCA 90 bp AGGCAGCTCATCATTCACAACACAGCAACAAACCTTCTGCTCTCATaGGGAGAATGTATTTTAAACTTGGGAAGAGTCATAATTCTGGGA +
Preference number: 1 (lower is better)
Translates to: RQLIIHNTATNLLLS*GECILNLGRVIILG
Trigger: TCCCAGAATTATGACTCTTCCCAAGTTTAAAATACATTCTCCTCATGAGAGCAGAAGGTTTGTTGCTGTGTTGTGAATGATGAGCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 90 bp CGTCATCTGCAAAATGGGGATAAGAATGCCTGTTGTAAGGACAGTTaGATGATCTTGCTCATGCCAACTTACAGAAGGTACGAAATAAAC +
Preference number: 1 (lower is better)
Translates to: RHLQNGDKNACCKDS*MILLMPTYRRYEIN
Trigger: GTTTATTTCGTACCTTCTGTAAGTTGGCATGAGCAAGATCATTCAACTGTCCTTACAACAGGCATTCTTATCCCCATTTTGCAGATGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 90 bp CTTCTAGAGGCCTCACCTATGACCCAGGAATTGCACTTATCCATATaGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCC +
Preference number: 1 (lower is better)
Translates to: LLEASPMTQELHLSI*KIKSNSHTFSKHLS
Trigger: GGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCCTGGGTCATAGGTGAGGCCTCTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560251.1
3UTR TCA 90 bp AAAAAGATGTTTATGGCTTTGCTGATAGCAGGCTGGAAAGCTAGCTaGATTTGCAGGCAACCTCAAGTAGTTAATGAAAAATTATTGTGG +
Preference number: 1 (lower is better)
Translates to: KKMFMALLIAGWKAS*ICRQPQVVNEKLLW
Trigger: CCACAATAATTTTTCATTAACTACTTGAGGTTGCCTGCAAATTCAGCTAGCTTTCCAGCCTGCTATCAGCAAAGCCATAAACATCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR TCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGAGGCCCTCTCCTCTGTaGGGAGGGACCTCTGGCATG +
Preference number: 2 (lower is better)
Translates to: QGWGATVQGDGEALLPGERPSPL*GGTSGM
Trigger: CATGCCAGAGGTCCCTCCTCACAGAGGAGAGGGCCT...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGTCTTGCTACCAGGGATaGGGGGTGGGGCTCAGCGTT +
Preference number: 2 (lower is better)
Translates to: QGWGATVQGDGEALLPGESCYQG*GVGLSV
Trigger: AACGCTGAGCCCCACCCCCCATCCCTGGTAGCAAGA...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGGTGAGGAGGGACCTCTaGCATGTGTGGGTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: QGWGATVQGDGEALLPGEVRRDL*HVWVCG
Trigger: ACCACACACCCACACATGCCAGAGGTCCCTCCTCAC...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR TCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGGATCGGAGGCTGTATTaGGCAGTGGGCACAAACCAC +
Preference number: 2 (lower is better)
Translates to: QGWGATVQGDGEALLPGEDRRLY*AVGTNH
Trigger: GTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATC...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR GCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGAGAGAACGGCATGACTaGACATGTGAGAACTGGGTG +
Preference number: 2 (lower is better)
Translates to: QGWGATVQGDGEALLPGERERHD*TCENWV
Trigger: CACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCT...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGCATACAACAATTAGCTaGGCATGGTGGTGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: QGWGATVQGDGEALLPGEHTTIS*AWWWVP
Trigger: AGGCACCCACCACCATGCCCAGCTAATTGTTGTATG...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR TCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGTATGTGGCAGAGGCCTaGATAAACAGGGATTTGAGA +
Preference number: 2 (lower is better)
Translates to: QGWGATVQGDGEALLPGEYVAEA*INRDLR
Trigger: TCTCAAATCCCTGTTTATTCAGGCCTCTGCCACATA...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR GCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGGTTCTCCTAAAATTCTaGCCTTACTTGCCACTCACC +
Preference number: 2 (lower is better)
Translates to: QGWGATVQGDGEALLPGEVLLKF*PYLPLT
Trigger: GGTGAGTGGCAAGTAAGGGCAGAATTTTAGGAGAAC...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR GCA 90 bp GAAGGCCCAAGAGGGGCCCAGGCTGGAAACTTTACTGCGAAGCAGCCCTCATCTTGGCTCAGGTTCTCATaGTCCAGAAGCTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: EGPRGAQAGNFTAKQPSSWLRFS*SRSWPR
Trigger: CCTGGGCCAGCTTCTGGAGCATGAGAACCTGAGCCA...AGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTAGAAGCTGGCCCAGGTaGCAGTGGGTTCCCTATGGA +
Preference number: 2 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTRSWPR*QWVPYG
Trigger: TCCATAGGGAACCCACTGCCACCTGGGCCAGCTTCT...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR GCA 90 bp CTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCAAGGGCCCCTCACATCTaGAGTGGCCGTATGCATCAG +
Preference number: 2 (lower is better)
Translates to: LTTPPDLKGQPFSTYDTSRAPHI*SGRMHQ
Trigger: CTGATGCATACGGCCACTGCAGATGTGAGGGGCCCT...TGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR GCA 90 bp GAAGGCCCAAGAGGGGCCCAGGCTGGAAACTTTACTGCGAAGCAGCCCTCATCTCTGAGACAGGAGAAATaGTTGAACCCGGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: EGPRGAQAGNFTAKQPSSLRQEK*LNPGSR
Trigger: TCTGCTTCCCGGGTTCAAGCATTTCTCCTGTCTCAG...AGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTGCCCTCATCTTAAGGTaGCTCAACACCACACCTGAG +
Preference number: 2 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTALILR*LNTTPE
Trigger: CTCAGGTGTGGTGTTGAGCCACCTTAAGATGAGGGC...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp ACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCACCAGCACCCTCACATCTGCAGTaGCCGTATGCATCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: TPPDLKGQPFSTYDTSPAPSHLQ*PYASEN
Trigger: GTTCTCTGATGCATACGGCCACTGCAGATGTGAGGG...TGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR TCA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTGGCTCTTATACTCTATaGCATGATCACTGGCCACCT +
Preference number: 2 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTGSYTL*HDHWPP
Trigger: AGGTGGCCAGTGATCATGTCATAGAGTATAAGAGCC...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTGCACATGTGAGAACTaGGTGCACCCGAGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSCTCEN*VHPSSV
Trigger: GACACTGCTCGGGTGCACCCAGTTCTCACATGTGCA...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR CCA 90 bp ATCATTGCTGCATCCTATTTGGAAAGCAATGGACAGACAGCCACGCTGAAAGCCCTAGTGAGGAGGTTCTaGGAAGCAGGTGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: IIAASYLESNGQTATLKALVRRF*EAGGPA
Trigger: AGCAGGCCCACCTGCTTCCCAGAACCTCCTCACTAG...GGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGATGCAGCAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR TCA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTATGACTTGGGCATGTTaGCTCCCTACTGAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSMTWAC*LPTEEG
Trigger: GCCTTCCTCAGTAGGGAGTCAACATGCCCAAGTCAT...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR GCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGTCTGCAGTGGCCGTATaGATCAGAGAACGGCATGAC +
Preference number: 2 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLSAVAV*IRERHD
Trigger: GTCATGCCGTTCTCTGATGCATACGGCCACTGCAGA...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR CCA 90 bp ACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCACCAGCAGTTCCGAGGAATCTCTaGCAGGTTGATGTTTTTCAC +
Preference number: 2 (lower is better)
Translates to: TPPDLKGQPFSTYDTSPAVPRNL*QVDVFH
Trigger: GTGAAAAACATCAACCTGCCAGAGATTCCTCGGAAC...TGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR-3UTR TCA 90 bp CATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCTTGGGAGCATCCATGTaGGAGGTAAAGGTGCAAATG +
Preference number: 2 (lower is better)
Translates to: HVRTGCTRAVSIGIPSLFLGASM*EVKVQM
Trigger: CATTTGCACCTTTACCTCTCACATGGATGCTCCCAA...GAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR GCA 90 bp CAGACACAAAGTTTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGTCTGCAGTGGCCGTATaGATCAGAGAACGGCATGAC +
Preference number: 2 (lower is better)
Translates to: QTQSFQVLRLDSSKAQNGSAVAV*IRERHD
Trigger: GTCATGCCGTTCTCTGATGCATACGGCCACTGCAGA...CCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR CCA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACGTTCTGGGAAGCAGGTaGGCCTGCTCAATGCAGTCC +
Preference number: 2 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNVLGSR*ACSMQS
Trigger: GGACTGCATTGAGCAGGCCCACCTGCTTCCCAGAAC...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 90 bp TGTGTGGGTGTGTGGTGGGTCCCTCTCCCTATTAGCAGAAATGTGTaGGGCATGAGCCAGGTTTATGATTTGGATTGTGTCCTGCACATA +
Preference number: 2 (lower is better)
Translates to: CVGVWWVPLPISRNV*GMSQVYDLDCVLHI
Trigger: TATGTGCAGGACACAATCCAAATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCACCACACACCCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR TCA 90 bp ACATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTAAAGTTTCCAGGTCCTaGGGCTTGACTCTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: TCENWVHPSSVNRNPFPIKVSRS*GLTLLR
Trigger: CCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTT...AATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CAA 90 bp AGGCCAATACTTGATCCTCAGACAAACTGGGACAGGTTGGGAACTTaGATGTTGAGATCGCCAATGTTGATGTTCCGAGGAATCTCTGGC +
Preference number: 2 (lower is better)
Translates to: RPILDPQTNWDRLGT*MLRSPMLMFRGISG
Trigger: GCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTTCCCAACCTGTCCCAGTTTGTCTGAGGATCAAGTATTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR-3UTR TCA 90 bp CAGACACAAAGTTTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGAAAGTTTCCAGGTCCTaGGGCTTGACTCTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: QTQSFQVLRLDSSKAQNGKVSRS*GLTLLR
Trigger: CCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTT...CCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR TCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGTTTCAGGCCAATACTTaGTCCTCAGACAAACTGGGA +
Preference number: 2 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLFQANT*SSDKLG
Trigger: TCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAA...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR-3UTR CCA 90 bp AGTAATGCATTAAACCACGTAACAAACGAACTCAAGAAGAGGGATGTGGCTCTGGGCTGTATTGAGCAGTaGGCACAAACCACAGGGAGC +
Preference number: 2 (lower is better)
Translates to: SNALNHVTNELKKRDVALGCIEQ*AQTTGS
Trigger: GCTCCCTGTGGTTTGTGCCCACTGCTCAATACAGCC...CAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp AGGAAGCAAATACTGATGTTTATGTGTTTGCAAAGGAACGTGTTGGGAAAATTCGGGAGACAGAAGGCCTaGCACCAGCCTGCGCCTAGA +
Preference number: 2 (lower is better)
Translates to: RKQILMFMCLQRNVLGKFGRQKA*HQPAPR
Trigger: TCTAGGCGCAGGCTGGTGCCAGGCCTTCTGTCTCCC...GAATTTTCCCAACACGTTCCTTTGCAAACACATAAACATCAGTATTTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
3UTR CAA 90 bp CTGACAAATCCCTCTGGGACTCTCATACTTCAGAGGCTCTCCAGTTaGGCTATTGCTAAACTTGGACTAGCCCCTACTACCGATCTTAAT +
Preference number: 2 (lower is better)
Translates to: LTNPSGTLILQRLSS*AIAKLGLAPTTDLN
Trigger: ATTAAGATCGGTAGTAGGGGCTAGTCCAAGTTTAGCAATAGCCAAACTGGAGAGCCTCTGAAGTATGAGAGTCCCAGAGGGATTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 90 bp ATACTTGATCCTCAGACAAACTGGGACAGGTTGGGAACTTTGATGTaGAGATCGCCAATGTTGATGTTCCGAGGAATCTCTGGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: ILDPQTNWDRLGTLM*RSPMLMFRGISGRL
Trigger: CAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTTCCCAACCTGTCCCAGTTTGTCTGAGGATCAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR-3UTR TCA 90 bp ATAAACGCCGATCTCCTTTATTCTGATCTCACATTCAGCAAATGTGAGAGAAATTGGGAGAATGGCACCTaGGGGAACAGAGCGTGCCCA +
Preference number: 2 (lower is better)
Translates to: INADLLYSDLTFSKCERNWENGT*GNRACP
Trigger: TGGGCACGCTCTGTTCCCTCAGGTGCCATTCTCCCA...ATTTCTCTCACATTTGCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 90 bp CTTGACTCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGACGTGCTaGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LDSSKAQNGFCFQTC*PCLSLLVLRTLFQA
Trigger: GGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CAA 90 bp CTCTATTTCAGGCCAATACTTGATCCTCAGACAAACTGGGACAGGTaGGGAACTTTGATGTTGAGATCGCCAATGTTGATGTTCCGAGGA +
Preference number: 2 (lower is better)
Translates to: LYFRPILDPQTNWDR*GTLMLRSPMLMFRG
Trigger: TCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTTCCCAACCTGTCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR-3UTR TCA 90 bp ATAAACGCCGATCTCCTTTATTCTGATCTCACATTCAGCAAATGTGAGAGAAATATGTTGACTCCCTACTaGGGAAGGCAGGGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: INADLLYSDLTFSKCERNMLTPY*GRQGPS
Trigger: TGAGGGGCCCTGCCTTCCTCAGTAGGGAGTCAACAT...ATTTCTCTCACATTTGCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp CCTCTAAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCATCATGCTCCAGAAGCTaGCCCAGGTGGCAGTGGGTT +
Preference number: 2 (lower is better)
Translates to: PLNIPYITKLLTAVSTNSSCSRS*PRWQWV
Trigger: AACCCACTGCCACCTGGGCCAGCTTCTGGAGCATGA...TGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp AAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGGTAGTGGTGCGATCTTaGCTCACTGCAAGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KYSIYHKVTDCGLHKFRLVVVRS*LTASSA
Trigger: GGCAGAGCTTGCAGTGAGCCAAGATCGCACCACTAC...CAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp CCTCTAAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGTGGTTGCGTGCCTGTaGTTCCAGCTACCTAGGAGG +
Preference number: 2 (lower is better)
Translates to: PLNIPYITKLLTAVSTNSVVACL*FQLPRR
Trigger: CCTCCTAGGTAGCTGGAACCACAGGCACGCAACCAC...TGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 90 bp CTCCCTATTAGCAGAAATGTGTTGGGCATGAGCCAGGTTTATGATTaGGATTGTGTCCTGCACATAACACCTGTGAGAATACAACTGGGA +
Preference number: 2 (lower is better)
Translates to: LPISRNVLGMSQVYD*DCVLHITPVRIQLG
Trigger: TCCCAGTTGTATTCTCACAGGTGTTATGTGCAGGACACAATCCAAATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 90 bp GCTTCGGCTTCAACATCAGTTAAATGGAGGGACACAGACGACTCTTaGGCTCTTATACTCTATGACATGATCACTGGCCACCTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: ASASTSVKWRDTDDS*ALILYDMITGHLRK
Trigger: TTTTCTAAGGTGGCCAGTGATCATGTCATAGAGTATAAGAGCCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 90 bp ACTACCGATCTTAATACCCATGTACCAATCATTGCTGCATCCTATTaGGAAAGCAATGGACAGACAGCCACGCTGAAAGCCCTTACTAGA +
Preference number: 2 (lower is better)
Translates to: TTDLNTHVPIIAASY*ESNGQTATLKALTR
Trigger: TCTAGTAAGGGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGATGCAGCAATGATTGGTACATGGGTATTAAGATCGGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CCA 90 bp CCTCTAAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGCAGTCCCTAACCCTTaGGAGCATCCATGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: PLNIPYITKLLTAVSTNSAVPNP*EHPCER
Trigger: CCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGC...TGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR TCA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACGTAAGGACAGTTGAATaGTCTTGCTCATGCCAACTT +
Preference number: 2 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNVRTVE*SCSCQL
Trigger: AAGTTGGCATGAGCAAGATCATTCAACTGTCCTTAC...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR TCA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACCGATCTCCTTTATTCTaGTCTCACATTCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNRSPLF*SHIQQM
Trigger: CATTTGCTGAATGTGAGATCAGAATAAAGGAGATCG...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR GCA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACTCTACTTTCGTCATCTaGAAAATGGGGATAAGAATG +
Preference number: 2 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNSTFVI*KMGIRM
Trigger: CATTCTTATCCCCATTTTGCAGATGACGAAAGTAGA...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 72 bp CACCGGGTGCTGCTGGGCACCCTCTCAGACCTGCCCTaGAACAGCATCAGGAGGCTGAGGGTCCCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: HRVLLGTLSDLP*NSIRRLRVPSQ
Trigger: CTGGCTGGGGACCCTCAGCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 72 bp AAAGGTACGCTGAGCAAGGGCGGGCAGTGCCAGGGCTaGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTC +
Preference number: 3 (lower is better)
Translates to: KGTLSKGGQCQG*GATVQGDGEAL
Trigger: GAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTGGCACTGCCCGCCCTTGCTCAGCGTACCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 72 bp TGCCATGGGAAAGGTACGCTGAGCAAGGGCGGGCAGTaGCAGGGCTGGGGTGCCACTGTACAGGGTGATGGG +
Preference number: 3 (lower is better)
Translates to: CHGKGTLSKGGQ*QGWGATVQGDG
Trigger: CCCATCACCCTGTACAGTGGCACCCCAGCCCTGGCACTGCCCGCCCTTGCTCAGCGTACCTTTCCCATGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp GCAGCCAGCGTGCGTCATGTCCAGGCCCCACAAGGGTaGCCCTGGCTCAGGTTCTCATGCTCCAGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: AASVRHVQAPQG*PWLRFSCSRSW
Trigger: CCAGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACATGACGCACGCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp GACCAGGTACCGTGCCCAGCAGCTGGGATGCAGCACTaGACACGAGACAAGCCCCTGCCCTGGAGGGGCTTA +
Preference number: 3 (lower is better)
Translates to: DQVPCPAAGMQH*TRDKPLPWRGL
Trigger: TAAGCCCCTCCAGGGCAGGGGCTTGTCTCGTGTTCAGTGCTGCATCCCAGCTGCTGGGCACGGTACCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 72 bp AGGACAGCATCCACCAGCCTGCAAGCACGGACCCCGTaGTGGTGTGTGAGTGCAGCACACACTGGGCTAACC +
Preference number: 3 (lower is better)
Translates to: RTASTSLQARTP*WCVSAAHTGLT
Trigger: GGTTAGCCCAGTGTGTGCTGCACTCACACACCAGCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 72 bp CAGCCTGCAAGCACGGACCCCGTGCTGGTGTGTGAGTaGAGCACACACTGGGCTAACCATCACCACAGTGAG +
Preference number: 3 (lower is better)
Translates to: QPASTDPVLVCE*STHWANHHHSE
Trigger: CTCACTGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTCACACACCAGCACGGGGTCCGTGCTTGCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp GGGAGCGCTGTTCAAAAATGGAAAACAAGGTGGCCCTaGCACCGGGTGCTGCTGGGCACCCTCTCAGACCTG +
Preference number: 3 (lower is better)
Translates to: GSAVQKWKTRWP*HRVLLGTLSDL
Trigger: CAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTTGAACAGCGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 72 bp AATGGAAAACAAGGTGGCCCTGACACCGGGTGCTGCTaGGCACCCTCTCAGACCTGCCCTGCAACAGCATCA +
Preference number: 3 (lower is better)
Translates to: NGKQGGPDTGCC*APSQTCPATAS
Trigger: TGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp CAGCCCGCGCAGGGGCTGCTGAAAGGCCACCCTCGGATTTCTCCAGCCTGTTTTTTTCTCCAGCCTGTTTaGAGCCTCAATCTGAGCCAC +
Preference number: 3 (lower is better)
Translates to: QPAQGLLKGHPRISPACFFLQPV*SLNLSH
Trigger: GTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAA...AAAACAGGCTGGAGAAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGGGCTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
3UTR GCA 72 bp AAAAATGGAAAACAAGGTGGCCCTGACACCGGGTGCTaGTGGGCACCCTCTCAGACCTGCCCTGCAACAGCA +
Preference number: 3 (lower is better)
Translates to: KNGKQGGPDTGC*WAPSQTCPATA
Trigger: TGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 72 bp CCTGACTTAATCCTCAATGTGGCAGGCACAGGGCCATaGCCAGGCCTAGAGGAAGGTGGGCTGTTTGGGGTA +
Preference number: 3 (lower is better)
Translates to: PDLILNVAGTGP*PGLEEGGLFGV
Trigger: TACCCCAAACAGCCCACCTTCCTCTAGGCCTGGCCATGGCCCTGTGCCTGCCACATTGAGGATTAAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp GACACAGCCCGCGCAGGGGCTGCTGAAAGGCCACCCTCGGATTTCTCCAGCCTGTTGGGAACTTTGATGTaGAGATCGCCAATGTTGATG +
Preference number: 3 (lower is better)
Translates to: DTARAGAAERPPSDFSSLLGTLM*RSPMLM
Trigger: CATCAACATTGGCGATCTCAACATCAAAGTTCCCAA...CAGGCTGGAGAAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGGGCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR TCA 72 bp AAAGGTGCAAATGACTTGGGCATGTTGACTCCCTACTaGGGAAGGCAGGGCCCCTCACATCTGCAGTGGCCG +
Preference number: 3 (lower is better)
Translates to: KGANDLGMLTPY*GRQGPSHLQWP
Trigger: CGGCCACTGCAGATGTGAGGGGCCCTGCCTTCCTCAGTAGGGAGTCAACATGCCCAAGTCATTTGCACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR GCA 72 bp TCTGCAGTGGCCGTATGCATCAGAGAACGGCATGACTaGACATGTGAGAACTGGGTGCACCCGAGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: SAVAVCIRERHD*TCENWVHPSSV
Trigger: GACACTGCTCGGGTGCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR GCA 72 bp TTCAAAAATGGAAAACAAGGTGGCCCTGACACCGGGTaGTGCTGGGCACCCTCTCAGACCTGCCCTGCAACA +
Preference number: 3 (lower is better)
Translates to: FKNGKQGGPDTG*CWAPSQTCPAT
Trigger: TGTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTTCCATTTTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp GGGCCCCTCACATCTGCAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACAACGTGCTTGCCTTGCTaGTCTTTGCTTGTCTTAAGG +
Preference number: 3 (lower is better)
Translates to: GPLTSAVAVCIRERHDCTTCLPC*SLLVLR
Trigger: CCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT...TGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR GCA 72 bp TCTTCCACAGGAAGCGGCCCACCTTCTGACCCACACTaGCCATCTCTGTGCTTATCATGGAGCTTTCAAGAG +
Preference number: 3 (lower is better)
Translates to: SSTGSGPPSDPH*PSLCLSWSFQE
Trigger: CTCTTGAAAGCTCCATGATAAGCACAGAGATGGGCAGTGTGGGTCAGAAGGTGGGCCGCTTCCTGTGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTAAAGGTGCAAATGACTaGGGCATGTTGACTCCCTAC +
Preference number: 3 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTKGAND*GMLTPY
Trigger: GTAGGGAGTCAACATGCCCAAGTCATTTGCACCTTT...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTCAGAGGCTCTCCAGTTaGGCTATTGCTAAACTTGGA +
Preference number: 3 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTQRLSS*AIAKLG
Trigger: TCCAAGTTTAGCAATAGCCAAACTGGAGAGCCTCTG...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 72 bp TGCATCAGAGAACGGCATGACTGCACATGTGAGAACTaGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTC +
Preference number: 3 (lower is better)
Translates to: CIRERHDCTCEN*VHPSSVNRNPF
Trigger: GAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CCA 72 bp GGACAGACAGCCACGCTGAAAGCCCTTACTAGAGACTaGTCCACAAGATCAGATTTAGCTGCCCCTGGTTTG +
Preference number: 3 (lower is better)
Translates to: GQTATLKALTRD*STRSDLAAPGL
Trigger: CAAACCAGGGGCAGCTAAATCTGATCTTGTGGACCAGTCTCTAGTAAGGGCTTTCAGCGTGGCTGTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp GGGGACAGAAGGCTGGCTCTATATGTGGCAGAGGCCTaGATAAACAGGGATTTGAGAGGGCTCAAGATATCC +
Preference number: 3 (lower is better)
Translates to: GDRRLALYVAEA*INRDLRGLKIS
Trigger: GGATATCTTGAGCCCTCTCAAATCCCTGTTTATTCAGGCCTCTGCCACATATAGAGCCAGCCTTCTGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp CTCAGGAAGGTGAAAATCAGGATGTCTGCCAGGAGCTaGCAAATCCCTCTGGGACTCTCATACTTCAGAGGC +
Preference number: 3 (lower is better)
Translates to: LRKVKIRMSARS*QIPLGLSYFRG
Trigger: GCCTCTGAAGTATGAGAGTCCCAGAGGGATTTGTCAGCTCCTGGCAGACATCCTGATTTTCACCTTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 72 bp TGGAACTGCTTCCCTATAGGGGCCTGTTTTCGTATCTaGCAACTTCCACTGAAACACGCAGATGGAGAACCC +
Preference number: 3 (lower is better)
Translates to: WNCFPIGACFRI*QLPLKHADGEP
Trigger: GGGTTCTCCATCTGCGTGTTTCAGTGGAAGTTGGCAGATACGAAAACAGGCCCCTATAGGGAAGCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp CCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCCCACGTGCTTGCCTTGCTaGTCTTTGCTTGTCTTAAGG +
Preference number: 3 (lower is better)
Translates to: PSSVNRNPFPIPCQTVFPTCLPC*SLLVLR
Trigger: CCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT...GGGGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR TCA 72 bp CAGGCTGCCAGTCCGATGCACTATATCCCAACAATCTaGGCACTCTGTCAAAGATGCTCACAGAGACAACAG +
Preference number: 3 (lower is better)
Translates to: QAASPMHYIPTI*ALCQRCSQRQQ
Trigger: CTGTTGTCTCTGTGAGCATCTTTGACAGAGTGCTCAGATTGTTGGGATATAGTGCATCGGACTGGCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 72 bp GACTGCGGTCTCCACAAATTCAGGCTGCCAGTCCGATaGACTATATCCCAACAATCTGAGCACTCTGTCAAA +
Preference number: 3 (lower is better)
Translates to: DCGLHKFRLPVR*TISQQSEHSVK
Trigger: TTTGACAGAGTGCTCAGATTGTTGGGATATAGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 72 bp CAGATCTCAGCCCCGTGTAATCTAAGGGAAGGTTACTaGAGCTGGGTCTACTTTCGTCATCTGCAAAATGGG +
Preference number: 3 (lower is better)
Translates to: QISAPCNLREGY*SWVYFRHLQNG
Trigger: CCCATTTTGCAGATGACGAAAGTAGACCCAGCTCCAGTAACCTTCCCTTAGATTACACGGGGCTGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp ACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCTGTTTCCAGACGTGCTaGCCTTGCTTGTCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: TRAVSIGIPSLFHAKQSSCFQTC*PCLSLL
Trigger: AAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACA...GGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR TCA 72 bp ACTGGGACTAGGACAATGCGGGAAGCATATTCTTCATaGGGCGGTAACCAAAAGGCTTGGCTATACCAAAGG +
Preference number: 3 (lower is better)
Translates to: TGTRTMREAYSS*GGNQKAWLYQR
Trigger: CCTTTGGTATAGCCAAGCCTTTTGGTTACCGCCTCATGAAGAATATGCTTCCCGCATTGTCCTAGTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp GGGTCCCTCTCCCTATTAGCAGAAATGTGTTGGGCATaGGCCAGGTTTATGATTTGGATTGTGTCCTGCACA +
Preference number: 3 (lower is better)
Translates to: GSLSLLAEMCWA*ARFMIWIVSCT
Trigger: TGTGCAGGACACAATCCAAATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp CATCCTATTTGGAAAGCAATGGACAGACAGCCACGCTaGAAGCCCTTACTAGAGACTGGTCCACAAGATCAG +
Preference number: 3 (lower is better)
Translates to: HPIWKAMDRQPR*KPLLETGPQDQ
Trigger: CTGATCTTGTGGACCAGTCTCTAGTAAGGGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 72 bp ACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTaGCAGTCCGATGCACTATATCCCAACAATCTGAGC +
Preference number: 3 (lower is better)
Translates to: TKLLTAVSTNSG*QSDALYPNNLS
Trigger: GCTCAGATTGTTGGGATATAGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp CAGACACAAAGTTTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGGACAGGTTGGGAACTTaGATGTTGAGATCGCCAATG +
Preference number: 3 (lower is better)
Translates to: QTQSFQVLRLDSSKAQNGDRLGT*MLRSPM
Trigger: CATTGGCGATCTCAACATCAAAGTTCCCAACCTGTC...CCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR CCA 72 bp TTACCACCTTGGGCTTCGGCTTCAACATCAGTTAAATaGAGGGACACAGACGACTCTTTGGCTCTTATACTC +
Preference number: 3 (lower is better)
Translates to: LPPWASASTSVK*RDTDDSLALIL
Trigger: GAGTATAAGAGCCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAGGTGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 72 bp CTCTATTTCAGGCCAATACTTGATCCTCAGACAAACTaGGACAGGTTGGGAACTTTGATGTTGAGATCGCCA +
Preference number: 3 (lower is better)
Translates to: LYFRPILDPQTN*DRLGTLMLRSP
Trigger: TGGCGATCTCAACATCAAAGTTCCCAACCTGTCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR-3UTR CAA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGAAAGGTGCAAATGACTaGGGCATGTTGACTCCCTAC +
Preference number: 3 (lower is better)
Translates to: LALLVFACLKDSISGQYLKGAND*GMLTPY
Trigger: GTAGGGAGTCAACATGCCCAAGTCATTTGCACCTTT...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR-3UTR CAA 90 bp AAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGAAATTCTGCCCTTACTaGCCACTCACCACACCCCCA +
Preference number: 3 (lower is better)
Translates to: KYSIYHKVTDCGLHKFRLKFCPY*PLTTPP
Trigger: TGGGGGTGTGGTGAGTGGCAAGTAAGGGCAGAATTT...CAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp ATCATTGCTGCATCCTATTTGGAAAGCAATGGACAGACAGCCACGCTGAAAGCCATGACATCAGGGGTTTaGATATCTATTCACCTACAC +
Preference number: 3 (lower is better)
Translates to: IIAASYLESNGQTATLKAMTSGV*ISIHLH
Trigger: GTGTAGGTGAATAGATATCAAAACCCCTGATGTCAT...GGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGATGCAGCAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR GCA 72 bp TCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGACGTaGTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACT +
Preference number: 3 (lower is better)
Translates to: SSKAQNGFCFQT*LPCLSLLVLRT
Trigger: AGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCCTTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR GCA 72 bp TCCTCTAAATATTCCATATATCACAAAGTTACTGACTaGGGTCTCCACAAATTCAGGCTGCCAGTCCGATGC +
Preference number: 3 (lower is better)
Translates to: SSKYSIYHKVTD*GLHKFRLPVRC
Trigger: GCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACTTGCCTTGCTTGTCTTaGCTTGTCTTAAGGACTCTA +
Preference number: 3 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNLPCLS*LVLRTL
Trigger: TAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAA...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp TTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTaGTCCTCAGACAAACTGGGACAGGTTGGGAACTTT +
Preference number: 3 (lower is better)
Translates to: LLVLRTLFQANT*SSDKLGQVGNF
Trigger: AAAGTTCCCAACCTGTCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
3UTR-3UTR CAA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGTTGCCTTGCTTGTCTTaGCTTGTCTTAAGGACTCTA +
Preference number: 3 (lower is better)
Translates to: LALLVFACLKDSISGQYLLPCLS*LVLRTL
Trigger: TAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAA...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
3UTR TCA 72 bp ATGGGGATAAGAATGCCTGTTGTAAGGACAGTTGAATaGTCTTGCTCATGCCAACTTACAGAAGGTACGAAA +
Preference number: 3 (lower is better)
Translates to: MGIRMPVVRTVE*SCSCQLTEGTK
Trigger: TTTCGTACCTTCTGTAAGTTGGCATGAGCAAGATCATTCAACTGTCCTTACAACAGGCATTCTTATCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR-3UTR CAA 90 bp AAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGATAACATTTACCACCTaGGGCTTCGGCTTCAACATC +
Preference number: 3 (lower is better)
Translates to: KYSIYHKVTDCGLHKFRLITFTT*GFGFNI
Trigger: GATGTTGAAGCCGAAGCCCAAGGTGGTAAATGTTAT...CAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp ACACAGACGACTCTTTGGCTCTTATACTCTATGACATaGTCACTGGCCACCTTAGAAAATCAAGCCTATTTA +
Preference number: 3 (lower is better)
Translates to: TQTTLWLLYSMT*SLATLENQAYL
Trigger: TAAATAGGCTTGATTTTCTAAGGTGGCCAGTGATCATGTCATAGAGTATAAGAGCCAAAGAGTCGTCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR TCA 72 bp TTTATGGCTTTGCTGATAGCAGGCTGGAAAGCTAGCTaGATTTGCAGGCAACCTCAAGTAGTTAATGAAAAA +
Preference number: 3 (lower is better)
Translates to: FMALLIAGWKAS*ICRQPQVVNEK
Trigger: TTTTTCATTAACTACTTGAGGTTGCCTGCAAATTCAGCTAGCTTTCCAGCCTGCTATCAGCAAAGCCATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CCA 72 bp GCCTCACCTATGACCCAGGAATTGCACTTATCCATATaGAAGATCAAATCCAATTCACACACATTTTCGAAA +
Preference number: 3 (lower is better)
Translates to: ASPMTQELHLSI*KIKSNSHTFSK
Trigger: TTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCCTGGGTCATAGGTGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560251.1
3UTR TCA 72 bp CTTCAGTTCCACCAGTCCCCCAATTATGTAACATTTTaGAACCCTGCCATGAAGAAATATAATCTTCGAAGA +
Preference number: 3 (lower is better)
Translates to: LQFHQSPNYVTF*NPAMKKYNLRR
Trigger: TCTTCGAAGATTATATTTCTTCATGGCAGGGTTTCAAAATGTTACATAATTGGGGGACTGGTGGAACTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617003.1
3UTR TCA 72 bp ATCATTCACAACACAGCAACAAACCTTCTGCTCTCATaGGGAGAATGTATTTTAAACTTGGGAAGAGTCATA +
Preference number: 3 (lower is better)
Translates to: IIHNTATNLLLS*GECILNLGRVI
Trigger: TATGACTCTTCCCAAGTTTAAAATACATTCTCCTCATGAGAGCAGAAGGTTTGTTGCTGTGTTGTGAATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CACAGAAATGCCAGGATCAAGAAAAGGGTCAGCGAGAGCGGGGCAGTAGGGCGGGTAGGGCGAGGGTCATaGTCGGTGCAGGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HRNARIKKRVSESGAVGRVGRGS*SVQEPQ
Trigger: CTGGGGCTCCTGCACCGAGCATGACCCTCGCCCTAC...CCGCCCTACTGCCCCGCTCTCGCTGACCCTTTTCTTGATCCTGGCATTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp TCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGACCCACGGGCCCAGACCGACGGCTaGCCCCAGAAGCCGAAACGA +
Preference number: 4 (lower is better)
Translates to: SSRHTPHCRFYLVPRDPRAQTDG*PQKPKR
Trigger: TCGTTTCGGCTTCTGGGGCCAGCCGTCGGTCTGGGC...CCGTGGGTCTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR GCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGCTGAGACAGGAGAAATaGTTGAACCCGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: QGWGATVQGDGEALLPGELRQEK*LNPGSR
Trigger: TCTGCTTCCCGGGTTCAAGCATTTCTCCTGTCTCAG...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp AATGCCAGGATCAAGAAAAGGGTCAGCGAGAGCGGGGCAGTAGGGCGGGAGACAGAGGGCAGGTGCGGATaGCGAGGAGAGTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: NARIKKRVSESGAVGRETEGRCG*RGEWSP
Trigger: AGGTGACCACTCTCCTCGGCATCCGCACCTGCCCTC...TGTCTCCCGCCCTACTGCCCCGCTCTCGCTGACCCTTTTCTTGATCCTGGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp GGGCACCCTCTCAGACCTGCCCTGCAACAGCATCAGGAGGCTGAGGGTCCCCAGCTTTTCTGGCGAAGCTaGGCCCAGAGAGCGTTTTAC +
Preference number: 4 (lower is better)
Translates to: GHPLRPALQQHQEAEGPQLFWRS*AQRAFY
Trigger: GTAAAACGCTCTCTGGGCCCAGCTTCGCCAGAAAAG...CTGGGGACCCTCAGCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp GGGCACCCTCTCAGACCTGCCCTGCAACAGCATCAGGAGGCTGAGGGTCCCCAGAGATTTAGCTGCCCCTaGTTTGAGCCTTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GHPLRPALQQHQEAEGPQRFSCP*FEPCSP
Trigger: AGGGGAGCAAGGCTCAAACCAGGGGCAGCTAAATCT...CTGGGGACCCTCAGCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGAAGATCAGATTTAGCTaGCCCTGGTTTGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QGWGATVQGDGEALLPGEKIRFS*PWFEPC
Trigger: GCAAGGCTCAAACCAGGGGCAGCTAAATCTGATCTT...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ATGGCACAGAAATGCCAGGATCAAGAAAAGGGTCAGCGAGAGCGGGGCAGTAGGGACCGTCAGCCGGGTTaGCAAAACGGAGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: MAQKCQDQEKGQRERGSRDRQPG*QNGEAA
Trigger: CGCCGCCTCTCCGTTTTGGCAACCCGGCTGACGGTC...CCTACTGCCCCGCTCTCGCTGACCCTTTTCTTGATCCTGGCATTTCTGTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTGCACGGACCCCGTGCTaGTGTGTGAGTGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTARTPC*CVSAAH
Trigger: GTGTGCTGCACTCACACACCAGCACGGGGTCCGTGC...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGGAAGCATATTCTTCATaGGGCGGTAACCAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: QGWGATVQGDGEALLPGEEAYSS*GGNQKA
Trigger: AGCCTTTTGGTTACCGCCTCATGAAGAATATGCTTC...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp ACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCACCAGCAAAAACAAGGTGGCCCTaGCACCGGGTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPPDLKGQPFSTYDTSPAKTRWP*HRVLLG
Trigger: GCCCAGCAGCACCCGGTGTCAGGGCCACCTTGTTTT...TGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ATGTCCAGGCCCCACAAGGGTGACCCTGGCTCAGGTTCTCATGCTCCAGAAGCTTGGAGAACCCTCCAGTaGTCCCGAGAAGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: MSRPHKGDPGSGSHAPEAWRTLQ*SREGRQ
Trigger: CTGTCTCCCTTCTCGGGAGCACTGGAGGGTTCTCCA...AGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCCCAGCAAGGGCGGGCAGTaGCAGGGCTGGGGTGCCACT +
Preference number: 4 (lower is better)
Translates to: PSSVNRNPFPIPCQTVFPSKGGQ*QGWGAT
Trigger: AGTGGCACCCCAGCCCTGGCACTGCCCGCCCTTGCT...GGGGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CGCTTCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAGTGACCAAAGAGCGGTaGCCCCGGGCGCCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RFYLVPRDPRENVTKWHRVTKER*PRAPRG
Trigger: GCCTCTCGGCGCCCGGGGGCACCGCTCTTTGGTCAC...TCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGATAGAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp GACACAGCCCGCGCAGGGGCTGCTGAAAGGCCACCCTCGGATTTCTCCAGCCTGAGCCGTGGCTTCCCATaGTTGTTGAAAACCAGAATC +
Preference number: 4 (lower is better)
Translates to: DTARAGAAERPPSDFSSLSRGFP*LLKTRI
Trigger: GATTCTGGTTTTCAACAACCATGGGAAGCCACGGCT...CAGGCTGGAGAAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGGGCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
CDS-3UTR CCA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCTGGCCCAGGTGGCAGTaGGTTCCCTATGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QWPYASENGMTAHVRTGCWPRWQ*VPYGGS
Trigger: GCTGCCTCCATAGGGAACCCACTGCCACCTGGGCCA...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCGGGAGACAGAAGGCCTaGCACCAGCCTGCGCCTAGA +
Preference number: 4 (lower is better)
Translates to: HTPHCRFYLVPRDPRENVGRQKA*HQPAPR
Trigger: TCTAGGCGCAGGCTGGTGCCAGGCCTTCTGTCTCCC...GACATTTTCCCGTGGGTCTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp CCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGCCAGGATCAAGAGGGTCCGGCCTCTCTaGCGCCTTGGAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PRDPRENVTKWHRNARIKRVRPL*RLGGQV
Trigger: CACCTGCCCTCCAAGGCGTCAGAGAGGCCGGACCCT...CTTGATCCTGGCATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR GCA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTAGGGCCCCTCACATCTaGAGTGGCCGTATGCATCAG +
Preference number: 4 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTRAPHI*SGRMHQ
Trigger: CTGATGCATACGGCCACTGCAGATGTGAGGGGCCCT...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCGGCCCTGACACCGGGTaGTGCTGGGCACCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TRAVSIGIPSLFHAKQSSGPDTG*CWAPSQ
Trigger: CTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCC...GGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp GGGCACCCTCTCAGACCTGCCCTGCAACAGCATCAGGAGGCTGAGGGTCCCCAGGTTCCGAGGAATCTCTaGCAGGTTGATGTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: GHPLRPALQQHQEAEGPQVPRNL*QVDVFH
Trigger: GTGAAAAACATCAACCTGCCAGAGATTCCTCGGAAC...CTGGGGACCCTCAGCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ATGTCCAGGCCCCACAAGGGTGACCCTGGCTCAGGTTCTCATGCTCCAGAAGCTGCAGTCCCTAACCCTTaGGAGCATCCATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: MSRPHKGDPGSGSHAPEAAVPNP*EHPCER
Trigger: CCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGC...AGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp TTACTTGCCACTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTAGGAAGGTGGGCTGTTTaGGGTATGGCCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLATHHTPRSEGPALFYLGRWAV*GMAQQG
Trigger: GCCCTGCTGGGCCATACCCCAAACAGCCCACCTTCC...TAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTGGCAAGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ATGTCCAGGCCCCACAAGGGTGACCCTGGCTCAGGTTCTCATGCTCCAGAAGCTGTGGGGACAGAAGGCTaGCTCTATATGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MSRPHKGDPGSGSHAPEAVGTEG*LYMWQR
Trigger: CCTCTGCCACATATAGAGCCAGCCTTCTGTCCCCAC...AGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ATGGCACAGAAATGCCAGGATCAAGAAAAGGGTCAGCGAGAGCGGGGCAGTAGGACGATCACTTCCGGTTaGTGCGCTGCTGAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: MAQKCQDQEKGQRERGSRTITSG*CAAESG
Trigger: GCCGCTCTCAGCAGCGCACCAACCGGAAGTGATCGT...CCTACTGCCCCGCTCTCGCTGACCCTTTTCTTGATCCTGGCATTTCTGTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp CTTGGGCTTCGGCTTCAACATCAGTTAAATGGAGGGACACAGACGACTCTTTGGCCGCGCAGGGGCTGCTaGAAGGCCACCCTCGGATTT +
Preference number: 4 (lower is better)
Translates to: LGLRLQHQLNGGTQTTLWPRRGC*KATLGF
Trigger: AAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGG...CCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp ATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGCCATGCAGGAGCCCCAGGTaGCCAAAGAGCGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: ISFPETHGKMSQNGTEMPCRSPR*PKSGAP
Trigger: GGGGGCACCGCTCTTTGGTCACCTGGGGCTCCTGCA...TGGCATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR GCA 90 bp ACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCACCAGCATGGCTCAGGTTCTCATaGTCCAGAAGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TPPDLKGQPFSTYDTSPAWLRFS*SRSWPR
Trigger: CCTGGGCCAGCTTCTGGAGCATGAGAACCTGAGCCA...TGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCCCTGACACCGGGTGCTaGTGGGCACCCTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: TRAVSIGIPSLFHAKQSSPDTGC*WAPSQT
Trigger: GGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGG...GGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp TCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGACCCACGGGTAGCTGTCTCTCCGTaGAGATGGGCTGTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SSRHTPHCRFYLVPRDPRVAVSP*RWAVPL
Trigger: TAGAGGAACAGCCCATCTGCACGGAGAGACAGCTAC...CCGTGGGTCTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR GCA 90 bp CACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCGCCCGCTCCAAATCATaGACTCCCGCCATCCCCTTA +
Preference number: 4 (lower is better)
Translates to: HTPHCRFYLVPRDPRENVARSKS*TPAIPL
Trigger: TAAGGGGATGGCGGGAGTGCATGATTTGGAGCGGGC...GACATTTTCCCGTGGGTCTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCAGAAGCTGGCCCAGGTaGCAGTGGGTTCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: QWPYASENGMTAHVRTGCRSWPR*QWVPYG
Trigger: TCCATAGGGAACCCACTGCCACCTGGGCCAGCTTCT...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCGACACCGGGTGCTGCTaGGCACCCTCTCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: TRAVSIGIPSLFHAKQSSDTGCC*APSQTC
Trigger: GCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTC...GGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCACCAGCAGAGACTGGCACCCTCTaGGGTAGGGTAGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: TPPDLKGQPFSTYDTSPAETGTL*GRVDSG
Trigger: TCCTGAGTCTACCCTACCCCAGAGGGTGCCAGTCTC...TGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGCCACGGCACTCGGAAACTTaGCCCCGGCGCTCACGAGCC +
Preference number: 4 (lower is better)
Translates to: ISFPETHGKMSQNGTEMPRHSET*PRRSRA
Trigger: GGCTCGTGAGCGCCGGGGCCAAGTTTCCGAGTGCCG...TGGCATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTCCTGCCGCAGCCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSPAAAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGCTGCGGCAGG...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCATGTCTGCCAGGAGCTaGCAAATCCCTCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: QWPYASENGMTAHVRTGCMSARS*QIPLGL
Trigger: GAGTCCCAGAGGGATTTGTCAGCTCCTGGCAGACAT...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp TGGGTCCCTCTCCCTATTAGCAGAAATGTGTTGGGCATGAGCCAGGTTTATGATTGCCACTGTACAGGGTaGTGGGGAGGCCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: WVPLPISRNVLGMSQVYDCHCTG*WGGPPP
Trigger: GGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCA...ATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGTCTACTTTCGTCATCTaGAAAATGGGGATAAGAATG +
Preference number: 4 (lower is better)
Translates to: QGWGATVQGDGEALLPGESTFVI*KMGIRM
Trigger: CATTCTTATCCCCATTTTGCAGATGACGAAAGTAGA...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CACAGAAATGCCAGGATCAAGAAAAGGGTCAGCGAGAGCGGGGCAGTAGGGCGGAGCATGTCCGTATACTaGAGATGGAGCAGCGGATAC +
Preference number: 4 (lower is better)
Translates to: HRNARIKKRVSESGAVGRSMSVY*RWSSGY
Trigger: GTATCCGCTGCTCCATCTGCAGTATACGGACATGCT...CCGCCCTACTGCCCCGCTCTCGCTGACCCTTTTCTTGATCCTGGCATTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp CCAACACCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATGCACATGTGAGAACTaGGTGCACCCGAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: PTPSHPSPPPGGCSAPYPCTCEN*VHPSSV
Trigger: GACACTGCTCGGGTGCACCCAGTTCTCACATGTGCA...TGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CCA 90 bp ACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCACCAGCAGGCTGTATTGAGCAGTaGGCACAAACCACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TPPDLKGQPFSTYDTSPAGCIEQ*AQTTGS
Trigger: GCTCCCTGTGGTTTGTGCCCACTGCTCAATACAGCC...TGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CAGACACAAAGTTTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGGACAAGCCCCTGCCCTaGAGGGGCTTACATCCCGGC +
Preference number: 4 (lower is better)
Translates to: QTQSFQVLRLDSSKAQNGDKPLP*RGLHPG
Trigger: GCCGGGATGTAAGCCCCTCCAGGGCAGGGGCTTGTC...CCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp GAATGTGACTTCAATCACTCAAGTTCTCATCGAGGCACACTCCCCACTGTCGCTCACCTCGGCCAGCGTTaGTTGGCCAGTCAGGATGCG +
Preference number: 4 (lower is better)
Translates to: ECDFNHSSSHRGTLPTVAHLGQR*LASQDA
Trigger: CGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTG...AGCGACAGTGGGGAGTGTGCCTCGATGAGAACTTGAGTGATTGAAGTCACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp CCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATATGTTGACTCCCTACTaGGGAAGGCAGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PTHHHLLEDVVHLIHMEDMLTPY*GRQGPS
Trigger: TGAGGGGCCCTGCCTTCCTCAGTAGGGAGTCAACAT...ATCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR TCA 90 bp CTTGGGCTTCGGCTTCAACATCAGTTAAATGGAGGGACACAGACGACTCTTTGGTGGGAGAATGGCACCTaGGGGAACAGAGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGLRLQHQLNGGTQTTLWWENGT*GNRACP
Trigger: TGGGCACGCTCTGTTCCCTCAGGTGCCATTCTCCCA...CCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp TTACTTGCCACTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTAGATCGGAGGCTGTATTaGGCAGTGGGCACAAACCAC +
Preference number: 4 (lower is better)
Translates to: LLATHHTPRSEGPALFYLDRRLY*AVGTNH
Trigger: GTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATC...TAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTGGCAAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCAGACAGACAGCCACGCTaGAAGCCCTTACTAGAGACT +
Preference number: 4 (lower is better)
Translates to: LTTPPDLKGQPFSTYDTSDRQPR*KPLLET
Trigger: AGTCTCTAGTAAGGGCTTTCAGCGTGGCTGTCTGTC...TGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCATGACCCAGTGTGGGTaGAGTGGAGCATGTCCGTAT +
Preference number: 4 (lower is better)
Translates to: HTPHCRFYLVPRDPRENVMTQCG*SGACPY
Trigger: ATACGGACATGCTCCACTTCACCCACACTGGGTCAT...GACATTTTCCCGTGGGTCTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR GCA 90 bp GAAGGCCCAAGAGGGGCCCAGGCTGGAAACTTTACTGCGAAGCAGCCCTCATCTGAAAATCAGGATGTCTaGCAGGAGCTGACAAATCCC +
Preference number: 4 (lower is better)
Translates to: EGPRGAQAGNFTAKQPSSENQDV*QELTNP
Trigger: GGGATTTGTCAGCTCCTGGCAGACATCCTGATTTTC...AGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CAGACACAAAGTTTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGCAGCATCCACCAGCCTaGAAGCACGGACCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: QTQSFQVLRLDSSKAQNGQHPPA*KHGPRA
Trigger: AGCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTG...CCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGCACGAGACAAGCCCCTaGCCTGGAGGGGCTTACATC +
Preference number: 4 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLHETSP*PGGAYI
Trigger: GATGTAAGCCCCTCCAGGGCAGGGGCTTGTCTCGTG...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp TCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGGAGGCGGCGGGAGCTTaGTTTTCTCACCGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SISFPETHGKMSQNGTEMEAAGA*FSHRPL
Trigger: GAGCGGGCGGTGAGAAAAGCAAGCTCCCGCCGCCTC...CATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCCCCTCACATCTGCAGTaGCCGTATGCATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: QWPYASENGMTAHVRTGCPSHLQ*PYASEN
Trigger: GTTCTCTGATGCATACGGCCACTGCAGATGTGAGGG...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGGACCTCTGGCATGTGTaGGTGTGTGGTGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLDLWHV*VCGGSL
Trigger: GAGGGACCCACCACACACCCACACATGCCAGAGGTC...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGCCCACAAGCAGACCTTaGGGAGGGAGAAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLPTSRP*GGRRGS
Trigger: GCTGCCTCTTCTCCCTCCCCAAGGTCTGCTTGTGGG...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCAAAGAGGGGCCCAGGCTaGAAACTTTACTGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: LTTPPDLKGQPFSTYDTSKRGPG*KLYCEA
Trigger: TGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTT...TGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCGAGTGCAGCACACACTaGGCTAACCATCACCACAGT +
Preference number: 4 (lower is better)
Translates to: QWPYASENGMTAHVRTGCECSTH*ANHHHS
Trigger: ACTGTGGTGATGGTTAGCCCAGTGTGTGCTGCACTC...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAAGGAGGCCCTCCTCCCTaGAGAGGGCGGCATGATCCT +
Preference number: 4 (lower is better)
Translates to: DVLALLVFACLKDSISGQGGPPP*RGRHDP
Trigger: AGGATCATGCCGCCCTCTCCAGGGAGGAGGGCCTCC...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp TCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGACCCACGGTTTAATGACCCAGTGTaGGTGAAGTGGAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: SSRHTPHCRFYLVPRDPRFNDPV*VKWSMS
Trigger: GGACATGCTCCACTTCACCCACACTGGGTCATTAAA...CCGTGGGTCTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp GCTTCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAGGATGCCGAGGAGAGTaGTCACCTCGGCCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: ASISFPETHGKMSQNGTEGCRGE*SPRPAL
Trigger: CAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCC...TTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGATAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp AATGCCAGGATCAAGAAAAGGGTCAGCGAGAGCGGGGCAGTAGGGCGGGAGACACCTGAACACGTTTTCTaGCTCTTTCCCCTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: NARIKKRVSESGAVGRETPEHVF*LFPLFS
Trigger: ACTGAAGAGGGGAAAGAGCCAGAAAACGTGTTCAGG...TGTCTCCCGCCCTACTGCCCCGCTCTCGCTGACCCTTTTCTTGATCCTGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp TCTGGCAGGTTGATGTTTTTCACAGCAGACACAGCCCGCGCAGGGGCTGCTGAATTGGGAGCATCCATGTaGGAGGTAAAGGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: SGRLMFFTADTARAGAAELGASM*EVKVQM
Trigger: CATTTGCACCTTTACCTCTCACATGGATGCTCCCAA...TTCAGCAGCCCCTGCGCGGGCTGTGTCTGCTGTGAAAAACATCAACCTGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR TCA 90 bp ACATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCACACCCCCAGATCTaGAGGGCCAGCCCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TCENWVHPSSVNRNPFPIPHPQI*RASPFL
Trigger: TAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGG...AATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR TCA 90 bp GAAGGCCCAAGAGGGGCCCAGGCTGGAAACTTTACTGCGAAGCAGCCCTCATCTGAAATGTGTTGGGCATaGGCCAGGTTTATGATTTGG +
Preference number: 4 (lower is better)
Translates to: EGPRGAQAGNFTAKQPSSEMCWA*ARFMIW
Trigger: CCAAATCATAAACCTGGCTCATGCCCAACACATTTC...AGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp GAAGGCCCAAGAGGGGCCCAGGCTGGAAACTTTACTGCGAAGCAGCCCTCATCTCCAACAGTTATTTATTaGACGCCATGGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: EGPRGAQAGNFTAKQPSSPTVIY*TPWTRY
Trigger: GTACCTGGTCCATGGCGTTCAATAAATAACTGTTGG...AGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGGCACCCTCTCAGACCTaGCCTGCAACAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLAPSQT*PATASG
Trigger: TCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGC...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp GGGCCCCTCACATCTGCAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACACAGTTTGTAGGGTGTTaGACTGGCTTTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPLTSAVAVCIRERHDCTQFVGC*TGFSSS
Trigger: AGAGGAAGAAAAGCCAGTGCAACACCCTACAAACTG...TGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CCA 90 bp CCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCCCTGCACATGTGAGAACTaGGTGCACCCGAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: PSSVNRNPFPIPCQTVFPCTCEN*VHPSSV
Trigger: GACACTGCTCGGGTGCACCCAGTTCTCACATGTGCA...GGGGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CCA 90 bp CCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATGCAGTCCCTAACCCTTaGGAGCATCCATGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: PTHHHLLEDVVHLIHMEDAVPNP*EHPCER
Trigger: CCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGC...ATCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGGTTCTGGGAAGCAGGTaGGCCTGCTCAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLVLGSR*ACSMQS
Trigger: GGACTGCATTGAGCAGGCCCACCTGCTTCCCAGAAC...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CCA 90 bp ACATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTTCATGCTCCAGAAGCTaGCCCAGGTGGCAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: TCENWVHPSSVNRNPFPISCSRS*PRWQWV
Trigger: AACCCACTGCCACCTGGGCCAGCTTCTGGAGCATGA...AATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCGCCCATGCGACAGTATaGAAGCAGGAGGCCCTACTC +
Preference number: 4 (lower is better)
Translates to: TRAVSIGIPSLFHAKQSSAHATV*KQEALL
Trigger: GAGTAGGGCCTCCTGCTTCCATACTGTCGCATGGGC...GGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCGTGAGCCACCGCACCTaGCCAACCTTAACCTATTTT +
Preference number: 4 (lower is better)
Translates to: QWPYASENGMTAHVRTGCVSHRT*PTLTYF
Trigger: AAAATAGGTTAAGGTTGGCCAGGTGCGGTGGCTCAC...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CTTGGGCTTCGGCTTCAACATCAGTTAAATGGAGGGACACAGACGACTCTTTGGACTAGCCAGGAGTGGTaGTTGCGTGCCTGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LGLRLQHQLNGGTQTTLWTSQEW*LRACGS
Trigger: GGAACCACAGGCACGCAACCACCACTCCTGGCTAGT...CCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGCCCTGGTGTCTTTTCTaGCGAAGCTGGGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLPWCLF*RSWAQR
Trigger: TCTCTGGGCCCAGCTTCGCCAGAAAAGACACCAGGG...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGCCGCGCAGGGGCTGCTaGAAGGCCACCCTCGGATTT +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLPRRGC*KATLGF
Trigger: AAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGG...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp GGCTCAAAATGGGTTCTGTTTCCAGACGTGCTTGCCTTGCTTGTCTTTGCTTGTATGTTGACTCCCTACTaGGGAAGGCAGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GSKWVLFPDVLALLVFACMLTPY*GRQGPS
Trigger: TGAGGGGCCCTGCCTTCCTCAGTAGGGAGTCAACAT...ACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR TCA 90 bp CCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATATGACTTGGGCATGTTaGCTCCCTACTGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PTHHHLLEDVVHLIHMEDMTWAC*LPTEEG
Trigger: GCCTTCCTCAGTAGGGAGTCAACATGCCCAAGTCAT...ATCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR TCA 90 bp GGGAACTTTGATGTTGAGATCGCCAATGTTGATGTTCCGAGGAATCTCTGGCAGCCACACCCCCAGATCTaGAGGGCCAGCCCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: GNFDVEIANVDVPRNLWQPHPQI*RASPFL
Trigger: TAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGG...CTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR TCA 90 bp ATGTCCAGGCCCCACAAGGGTGACCCTGGCTCAGGTTCTCATGCTCCAGAAGCTGTAAGGACAGTTGAATaGTCTTGCTCATGCCAACTT +
Preference number: 4 (lower is better)
Translates to: MSRPHKGDPGSGSHAPEAVRTVE*SCSCQL
Trigger: AAGTTGGCATGAGCAAGATCATTCAACTGTCCTTAC...AGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp TTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGGCTTCGAGGCTGCAGTaGGCCATGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: FQVLRLDSSKAQNGFCFQASRLQ*AMITPL
Trigger: CAGTGGTGTGATCATGGCTCACTGCAGCCTCGAAGC...CTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CCAACACCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCACCAGATGTACCTGGATaGGGTCCAAGATTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: PTPSHPSPPPGGCSAPYPPDVPG*GPRFQV
Trigger: AACTTGGAATCTTGGACCTCATCCAGGTACATCTGG...TGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558999.5
CDS-3UTR GCA 90 bp CATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCTCTGCAGTGGCCGTATaGATCAGAGAACGGCATGAC +
Preference number: 4 (lower is better)
Translates to: HVRTGCTRAVSIGIPSLFSAVAV*IRERHD
Trigger: GTCATGCCGTTCTCTGATGCATACGGCCACTGCAGA...GAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR GCA 90 bp TTACTTGCCACTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTACCTTCTGACCCACACTaGCCATCTCTGTGCTTATCA +
Preference number: 4 (lower is better)
Translates to: LLATHHTPRSEGPALFYLPSDPH*PSLCLS
Trigger: TGATAAGCACAGAGATGGGCAGTGTGGGTCAGAAGG...TAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTGGCAAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ACATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTTTCATGCCATTCTCCTaGCGCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TCENWVHPSSVNRNPFPIFMPFS*RSLLSS
Trigger: GCTACTCAGGAGGCTGCGGCAGGAGAATGGCATGAA...AATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp AGTGAAGGGTATCTAGTCTCTGGAAAGTCCCAGCCAACACTGAAGCAAAATAATGCCTTGGAGGGCAGGTaGGGATGCCGAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SEGYLVSGKSQPTLKQNNALEGR*GCRGEW
Trigger: CCACTCTCCTCGGCATCCGCACCTGCCCTCCAAGGC...ATTATTTTGCTTCAGTGTTGGCTGGGACTTTCCAGAGACTAGATACCCTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp GGCTCAAAATGGGTTCTGTTTCCAGACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTAGTGAGGAGGTTCTaGGAAGCAGGTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GSKWVLFPDVLALLVFACLVRRF*EAGGPA
Trigger: AGCAGGCCCACCTGCTTCCCAGAACCTCCTCACTAG...ACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CCA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTCATGTGAGGGATGTTTaGATGCTCGCTTTGAATCTG +
Preference number: 4 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTHVRDV*MLALNL
Trigger: CAGATTCAAAGCGAGCATCCAAACATCCCTCACATG...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ATCATTGCTGCATCCTATTTGGAAAGCAATGGACAGACAGCCACGCTGAAAGCCGTGGTTGCGTGCCTGTaGTTCCAGCTACCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: IIAASYLESNGQTATLKAVVACL*FQLPRR
Trigger: CCTCCTAGGTAGCTGGAACCACAGGCACGCAACCAC...GGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGATGCAGCAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp TTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGAGGCCTAGAGGAAGGTaGGCTGTTTGGGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: FQVLRLDSSKAQNGFCFQRPRGR*AVWGMA
Trigger: GGCCATACCCCAAACAGCCCACCTTCCTCTAGGCCT...CTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp TTGTTTCCAACACCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTAAAACCAGAATCGCCTaGATCATCTTTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LFPTPSHPSPPPGGCSAPKTRIA*IIFASH
Trigger: GTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTT...AGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR TCA 90 bp TTCCAACACCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: FQHHPTHHHLLEDVVHLIASHGC*KPESPE
Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGC...GATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR TCA 90 bp CCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PSHPSPPPGGCSAPYPYGASHGC*KPESPE
Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGC...TCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR TCA 90 bp CCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGATGTTGTCATCCCGCTTaGGGACTAGATGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PSHPSPPPGGCSAPYPYGCCHPA*GLDGKS
Trigger: AGACTTTCCATCTAGTCCTCAAGCGGGATGACAACA...TCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR TCA 90 bp ATCCACACAAAATACAAAGTAGAGGGTAGCATAGTGCCGGTAGATCAGTTTGTACCGCGCAGGGGCTGCTaGAAGGCCACCCTCGGATTT +
Preference number: 4 (lower is better)
Translates to: IHTKYKVEGSIVPVDQFVPRRGC*KATLGF
Trigger: AAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGG...TACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR TCA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCAGGCCCTCTCCTCTGTaGGGAGGGACCTCTGGCATG +
Preference number: 4 (lower is better)
Translates to: ALLVFACLKDSISGQYLIRPSPL*GGTSGM
Trigger: CATGCCAGAGGTCCCTCCTCACAGAGGAGAGGGCCT...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp AGTAATGCATTAAACCACGTAACAAACGAACTCAAGAAGAGGGATGTGGCTCTGCAGGCCCCACAAGGGTaGCCCTGGCTCAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SNALNHVTNELKKRDVALQAPQG*PWLRFS
Trigger: TGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTG...CAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CAGACACAAAGTTTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGGCTCAACACCACACCTaGGATCTAGCCCATGCGACA +
Preference number: 4 (lower is better)
Translates to: QTQSFQVLRLDSSKAQNGAQHHT*DLAHAT
Trigger: TGTCGCATGGGCTAGATCTCAGGTGTGGTGTTGAGC...CCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp AACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAGACAGTGGAGTCAAGTaGACAGTCTCAGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: NWVHPSSVNRNPFPIPCQDSGVK*TVSDLS
Trigger: GCTGAGATCTGAGACTGTTCACTTGACTCCACTGTC...TTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp GGGCCCCTCACATCTGCAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACAATATCACAAAGTTACTaGCTGCGGTCTCCACAAATT +
Preference number: 4 (lower is better)
Translates to: GPLTSAVAVCIRERHDCTISQSY*LRSPQI
Trigger: AATTTGTGGAGACCGCAGTCAGTAACTTTGTGATAT...TGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCTACTCAGAGAAGGTaGTCAGCCCTAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSSTQRR*SALVRR
Trigger: CCTCCTCACTAGGGCTGAGCACCTTCTCTGAGTAGA...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR GCA 90 bp CTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCATCCACAAATTCAGGCTaGCAGTCCGATGCACTATAT +
Preference number: 4 (lower is better)
Translates to: LTTPPDLKGQPFSTYDTSSTNSG*QSDALY
Trigger: ATATAGTGCATCGGACTGGCAGCCTGAATTTGTGGA...TGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGCCAGGATCAAGGTTGGCCAGTCAGGATaGGAATCCGGATCTATGTCC +
Preference number: 4 (lower is better)
Translates to: PRDPRENVTKWHRNARIKVGQSG*ESGSMS
Trigger: GGACATAGATCCGGATTCGCATCCTGACTGGCCAAC...CTTGATCCTGGCATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTGGTAACCAAAAGGCTTaGCTATACCAAAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTGNQKA*LYQRIL
Trigger: CAGAATCCTTTGGTATAGCCAAGCCTTTTGGTTACC...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCCCCAGAAAGAACATTTATaGGCGCCTAAGCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSSVNRNPFPIPCQTVFPQKEHL*APKPWE
Trigger: CTCCCAGGGCTTAGGCGCCCATAAATGTTCTTTCTG...GGGGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp TTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGGTAGTGGTGCGATCTTaGCTCACTGCAAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FQVLRLDSSKAQNGFCFQVVVRS*LTASSA
Trigger: GGCAGAGCTTGCAGTGAGCCAAGATCGCACCACTAC...CTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCCTATTTGGAAAGCAATaGACAGACAGCCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: QWPYASENGMTAHVRTGCLFGKQ*TDSHAE
Trigger: TTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAG...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp TTACTTGCCACTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTAGCTGACAAATCCCTCTaGGACTCTCATACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LLATHHTPRSEGPALFYLADKSL*DSHTSE
Trigger: CTCTGAAGTATGAGAGTCCCAGAGGGATTTGTCAGC...TAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTGGCAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTACTGAAACACGCAGATaGAGAACCCTCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSTETRR*RTLQCS
Trigger: GGAGCACTGGAGGGTTCTCCATCTGCGTGTTTCAGT...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCACCAGCATGTAGGGTGTTGCACTaGCTTTTCTTCCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TPPDLKGQPFSTYDTSPACRVLH*LFFLSL
Trigger: AAGAGAGAGGAAGAAAAGCCAGTGCAACACCCTACA...TGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CCA 90 bp TCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGTCGGCCAGCGTTGGTTaGCCAGTCAGGATGCGAATC +
Preference number: 4 (lower is better)
Translates to: SISFPETHGKMSQNGTEMSASVG*PVRMRI
Trigger: GATTCGCATCCTGACTGGCCAACCAACGCTGGCCGA...CATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp CATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAAAAACCAGAATCGCCTaGATCATCTTTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HPTHHHLLEDVVHLIHMEKTRIA*IIFASH
Trigger: GTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTT...TTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR TCA 90 bp CCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATTGTTGTCATCCCGCTTaGGGACTAGATGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PTHHHLLEDVVHLIHMEDCCHPA*GLDGKS
Trigger: AGACTTTCCATCTAGTCCTCAAGCGGGATGACAACA...ATCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR TCA 90 bp GAGGATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTCCGCGCAGGGGCTGCTaGAAGGCCACCCTCGGATTT +
Preference number: 4 (lower is better)
Translates to: EDVVHLIHMEDQIQFTHIPRRGC*KATLGF
Trigger: AAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGG...AATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
CDS-3UTR TCA 90 bp CCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCCCAAAGTTTCCAGGTCCTaGGGCTTGACTCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: PSSVNRNPFPIPCQTVFPKVSRS*GLTLLR
Trigger: CCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTT...GGGGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR TCA 90 bp TTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGATGACTTGGGCATGTTaGCTCCCTACTGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FQVLRLDSSKAQNGFCFQMTWAC*LPTEEG
Trigger: GCCTTCCTCAGTAGGGAGTCAACATGCCCAAGTCAT...CTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR TCA 90 bp ATGTCCAGGCCCCACAAGGGTGACCCTGGCTCAGGTTCTCATGCTCCAGAAGCTCACATTCAGCAAATGTaGGAGAAATGTGAATGTACT +
Preference number: 4 (lower is better)
Translates to: MSRPHKGDPGSGSHAPEAHIQQM*EKCECT
Trigger: AGTACATTCACATTTCTCTCACATTTGCTGAATGTG...AGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CCAATCAAACTTCCACCCTCCAAGAAGTTACAGATGTTGTCATCCCGCTTGAGGCGCCTGAATCATCTTTaGCAGCCACGGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PIKLPPSKKLQMLSSRLRRLNHL*QPRFSQ
Trigger: CTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCG...CCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGTTTGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558806.5
CDS-3UTR GCA 90 bp CTTGGGCTTCGGCTTCAACATCAGTTAAATGGAGGGACACAGACGACTCTTTGGCTGAGATCTAGCCCATaGGACAGTATGGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGLRLQHQLNGGTQTTLWLRSSP*DSMEAG
Trigger: TCCTGCTTCCATACTGTCGCATGGGCTAGATCTCAG...CCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCAGCCGTGGCTTCCCATaGTTGTTGAAAACCAGAATC +
Preference number: 4 (lower is better)
Translates to: HVRTGCTRAVSIGIPSLFSRGFP*LLKTRI
Trigger: GATTCTGGTTTTCAACAACCATGGGAAGCCACGGCT...GAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CCA 90 bp TTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGCCCTCACATCTGCAGTaGCCGTATGCATCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: FQVLRLDSSKAQNGFCFQPSHLQ*PYASEN
Trigger: GTTCTCTGATGCATACGGCCACTGCAGATGTGAGGG...CTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CCA 90 bp CTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCATCAACATCAGTTAAATaGAGGGACACAGACGACTCT +
Preference number: 4 (lower is better)
Translates to: LTTPPDLKGQPFSTYDTSSTSVK*RDTDDS
Trigger: AGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGA...TGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp GCTTCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAACCAGTGTGGGTGAAGTaGAGCATGTCCGTATACTGC +
Preference number: 4 (lower is better)
Translates to: ASISFPETHGKMSQNGTEPVWVK*SMSVYC
Trigger: GCAGTATACGGACATGCTCCACTTCACCCACACTGG...TTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGATAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp CTTGGGCTTCGGCTTCAACATCAGTTAAATGGAGGGACACAGACGACTCTTTGGGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LGLRLQHQLNGGTQTTLWASHGC*KPESPE
Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGC...CCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSASHGC*KPESPE
Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGC...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR TCA 90 bp CCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGCCAGGATCAAGGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PRDPRENVTKWHRNARIKASHGC*KPESPE
Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGC...CTTGATCCTGGCATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp ACATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTGGCTCTTATACTCTATaGCATGATCACTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: TCENWVHPSSVNRNPFPIGSYTL*HDHWPP
Trigger: AGGTGGCCAGTGATCATGTCATAGAGTATAAGAGCC...AATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGGGCGGGAGGATGGCTTaGGGTAAGGAGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLGGRMA*GKELET
Trigger: GGTCTCTAACTCCTTACCTCAAGCCATCCTCCCGCC...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp TGGGTCCCTCTCCCTATTAGCAGAAATGTGTTGGGCATGAGCCAGGTTTATGATAGTGGCAGTGAGCACTaGAAACCCAGTATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: WVPLPISRNVLGMSQVYDSGSEH*KPSIWP
Trigger: TGGCCAAATACTGGGTTTTCAGTGCTCACTGCCACT...ATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAACGCCTGAATCATCTTTaGCAGCCACGGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: DVLALLVFACLKDSISGQRLNHL*QPRFSQ
Trigger: CTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCG...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR GCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGAGGGCCCCTCACATCTaGAGTGGCCGTATGCATCAG +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLRAPHI*SGRMHQ
Trigger: CTGATGCATACGGCCACTGCAGATGTGAGGGGCCCT...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR GCA 90 bp AGTAATGCATTAAACCACGTAACAAACGAACTCAAGAAGAGGGATGTGGCTCTGCTCTCAGACCTGCCCTaGAACAGCATCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SNALNHVTNELKKRDVALLSDLP*NSIRRL
Trigger: CAGCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAG...CAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACGTGCTGGTGTGTGAGTaGAGCACACACTGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: VLALLVFACLKDSISGQYVLVCE*STHWAN
Trigger: GTTAGCCCAGTGTGTGCTGCACTCACACACCAGCAC...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTAGCCGTGGCTTCCCATaGTTGTTGAAAACCAGAATC +
Preference number: 4 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSSRGFP*LLKTRI
Trigger: GATTCTGGTTTTCAACAACCATGGGAAGCCACGGCT...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CCA 90 bp CCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATCGCTTGAGGACTAGATaGAAAGTCTCTCGAACAATC +
Preference number: 4 (lower is better)
Translates to: PTHHHLLEDVVHLIHMEDRLRTR*KVSRTI
Trigger: GATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCG...ATCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CCA 90 bp CATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAACGCTTGAGGACTAGATaGAAAGTCTCTCGAACAATC +
Preference number: 4 (lower is better)
Translates to: HPTHHHLLEDVVHLIHMERLRTR*KVSRTI
Trigger: GATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCG...TTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CCA 90 bp CCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACAGTTCTGGGAAGCAGGTaGGCCTGCTCAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PGGCSAPYPYGRSNPIHTVLGSR*ACSMQS
Trigger: GGACTGCATTGAGCAGGCCCACCTGCTTCCCAGAAC...TGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATCCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CCA 90 bp AGTAATGCATTAAACCACGTAACAAACGAACTCAAGAAGAGGGATGTGGCTCTGGTGAGGAGGGACCTCTaGCATGTGTGGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SNALNHVTNELKKRDVALVRRDL*HVWVCG
Trigger: ACCACACACCCACACATGCCAGAGGTCCCTCCTCAC...CAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAACTTCCAGATGTACCTaGATGAGGTCCAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: HPTHHHLLEDVVHLIHMETSRCT*MRSKIP
Trigger: TGGAATCTTGGACCTCATCCAGGTACATCTGGAAGT...TTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558999.5
CDS-3UTR CCA 90 bp ATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGCCATCCGTATACTGCAGATaGAGCAGCGGATACAGATGC +
Preference number: 4 (lower is better)
Translates to: ISFPETHGKMSQNGTEMPSVYCR*SSGYRC
Trigger: GCATCTGTATCCGCTGCTCCATCTGCAGTATACGGA...TGGCATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp CGCTTCTATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAGGGTATCTAGTCTCTaGAAAGTCCCAGCCAACACT +
Preference number: 4 (lower is better)
Translates to: RFYLVPRDPRENVTKWHRRVSSL*KVPANT
Trigger: AGTGTTGGCTGGGACTTTCCAGAGACTAGATACCCT...TCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGATAGAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp TACAAAGTAGAGGGTAGCATAGTGCCGGTAGATCAGTTTGTAGTCAGAGCCACCTGTTGTCATCCCGCTTaGGGACTAGATGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: YKVEGSIVPVDQFVVRATCCHPA*GLDGKS
Trigger: AGACTTTCCATCTAGTCCTCAAGCGGGATGACAACA...GGTGGCTCTGACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR TCA 90 bp ATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCCGCGCAGGGGCTGCTaGAAGGCCACCCTCGGATTT +
Preference number: 4 (lower is better)
Translates to: MEDQIQFTHIFETLIQSFPRRGC*KATLGF
Trigger: AAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCGCGG...GAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
CDS-3UTR TCA 90 bp TGGGTCCCTCTCCCTATTAGCAGAAATGTGTTGGGCATGAGCCAGGTTTATGATTTGGGAGCATCCATGTaGGAGGTAAAGGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: WVPLPISRNVLGMSQVYDLGASM*EVKVQM
Trigger: CATTTGCACCTTTACCTCTCACATGGATGCTCCCAA...ATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGTTTGGATGCTCGCTTTaGATCTGTAGGACCACTCAA +
Preference number: 4 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLFGCSL*ICRTTQ
Trigger: TTGAGTGGTCCTACAGATTCAAAGCGAGCATCCAAA...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp TGGGTCCCTCTCCCTATTAGCAGAAATGTGTTGGGCATGAGCCAGGTTTATGATGTAGACTCAGGAAGGTaGAAATCAGGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WVPLPISRNVLGMSQVYDVDSGR*KSGCLP
Trigger: TGGCAGACATCCTGATTTTCACCTTCCTGAGTCTAC...ATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp AGGAAGCAAATACTGATGTTTATGTGTTTGCAAAGGAACGTGTTGGGAAAATTCCGGTTGGTGCGCTGCTaGGAGCGGCACTCGGAAACT +
Preference number: 4 (lower is better)
Translates to: RKQILMFMCLQRNVLGKFRLVRC*ERHSET
Trigger: AGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCG...GAATTTTCCCAACACGTTCCTTTGCAAACACATAAACATCAGTATTTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp ATGGCACAGAAATGCCAGGATCAAGAAAAGGGTCAGCGAGAGCGGGGCAGTAGGAAAGATGACAGAATGTaGCTTCAATCACTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: MAQKCQDQEKGQRERGSRKDDRM*LQSLKF
Trigger: GAACTTGAGTGATTGAAGTCACATTCTGTCATCTTT...CCTACTGCCCCGCTCTCGCTGACCCTTTTCTTGATCCTGGCATTTCTGTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR GCA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTGTTCTCCTAAAATTCTaGCCTTACTTGCCACTCACC +
Preference number: 4 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSVLLKF*PYLPLT
Trigger: GGTGAGTGGCAAGTAAGGGCAGAATTTTAGGAGAAC...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CCGGTAGATCAGTTTGTAGTCAGAGCCACCAATCAAACTTCCACCCTCCAAGAAAGCCGTGGCTTCCCATaGTTGTTGAAAACCAGAATC +
Preference number: 4 (lower is better)
Translates to: PVDQFVVRATNQTSTLQESRGFP*LLKTRI
Trigger: GATTCTGGTTTTCAACAACCATGGGAAGCCACGGCT...TTCTTGGAGGGTGGAAGTTTGATTGGTGGCTCTGACTACAAACTGATCTACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR CCA 90 bp AAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGTCTTGCTACCAGGGATaGGGGGTGGGGCTCAGCGTT +
Preference number: 4 (lower is better)
Translates to: KYSIYHKVTDCGLHKFRLSCYQG*GVGLSV
Trigger: AACGCTGAGCCCCACCCCCCATCCCTGGTAGCAAGA...CAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CAGACACAAAGTTTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGCGAACAATCTGCTGTTaGATTTCTTCTGGGAAACGC +
Preference number: 4 (lower is better)
Translates to: QTQSFQVLRLDSSKAQNGRTICC*ISSGKR
Trigger: GCGTTTCCCAGAAGAAATTCAACAGCAGATTGTTCG...CCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTTGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR TCA 90 bp CCGGTAGATCAGTTTGTAGTCAGAGCCACCAATCAAACTTCCACCCTCCAAGAACCACAAAAACCTGGATaGGGTCCAAGATTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: PVDQFVVRATNQTSTLQEPQKPG*GPRFQV
Trigger: AACTTGGAATCTTGGACCTCATCCAGGTTTTTGTGG...TTCTTGGAGGGTGGAAGTTTGATTGGTGGCTCTGACTACAAACTGATCTACCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR TCA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACTGGAGCTTTCAAGAGTaGGGATCGGAGGCTGTATTG +
Preference number: 4 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNWSFQE*GSEAVL
Trigger: CAATACAGCCTCCGATCCTCACTCTTGAAAGCTCCA...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGTCTACTCAGAGAAGGTaGTCAGCCCTAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLSTQRR*SALVRR
Trigger: CCTCCTCACTAGGGCTGAGCACCTTCTCTGAGTAGA...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR GCA 90 bp GGCTCAAAATGGGTTCTGTTTCCAGACGTGCTTGCCTTGCTTGTCTTTGCTTGTCACAAAGTTACTGACTaGGGTCTCCACAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: GSKWVLFPDVLALLVFACHKVTD*GLHKFR
Trigger: CCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTG...ACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp TCAAGTTCTCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGCTTATTGAGCCCTTATaGGGCAGCATTTATAATTTC +
Preference number: 4 (lower is better)
Translates to: SSSHRGTLPTVASISFPELIEPL*GSIYNF
Trigger: GAAATTATAAATGCTGCCGCATAAGGGCTCAATAAG...CTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGAGAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp TGGGTCCCTCTCCCTATTAGCAGAAATGTGTTGGGCATGAGCCAGGTTTATGATCGCTTGAGGACTAGATaGAAAGTCTCTCGAACAATC +
Preference number: 4 (lower is better)
Translates to: WVPLPISRNVLGMSQVYDRLRTR*KVSRTI
Trigger: GATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCG...ATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATCATACAACAATTAGCTaGGCATGGTGGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TCLPCLSLLVLRTLFQANHTTIS*AWWWVP
Trigger: AGGCACCCACCACCATGCCCAGCTAATTGTTGTATG...ATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGGCCCTCATCTTAAGGTaGCTCAACACCACACCTGAG +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLALILR*LNTTPE
Trigger: CTCAGGTGTGGTGTTGAGCCACCTTAAGATGAGGGC...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp GAAGCAAATACTGATGTTTATGTGTTTGCAAAGGAACGTGTTGGGAAAATTCAAGAACGTTCCGCGGAGTaGAGACGCCGGTCATTCGGC +
Preference number: 4 (lower is better)
Translates to: EANTDVYVFAKERVGKIQERSAE*RRRSFG
Trigger: GCCGAATGACCGGCGTCTCCACTCCGCGGAACGTTC...TTGAATTTTCCCAACACGTTCCTTTGCAAACACATAAACATCAGTATTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp AAATGGCACAGAAATGCCAGGATCAAGAAAAGGGTCAGCGAGAGCGGGGCAGTAGAAAATGTCACAAAATaGCACAGAAATGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: KWHRNARIKKRVSESGAVENVTK*HRNARI
Trigger: GATCCTGGCATTTCTGTGCCATTTTGTGACATTTTC...TACTGCCCCGCTCTCGCTGACCCTTTTCTTGATCCTGGCATTTCTGTGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR TCA 90 bp ACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATAAAACCAGAATCGCCTaGATCATCTTTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TCLPCLSLLVLRTLFQANKTRIA*IIFASH
Trigger: GTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTT...ATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACAAAACCAGAATCGCCTaGATCATCTTTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VLALLVFACLKDSISGQYKTRIA*IIFASH
Trigger: GTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTT...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VLALLVFACLKDSISGQYASHGC*KPESPE
Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGC...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAACGAACAATCTGCTGTTaGATTTCTTCTGGGAAACGC +
Preference number: 4 (lower is better)
Translates to: DVLALLVFACLKDSISGQRTICC*ISSGKR
Trigger: GCGTTTCCCAGAAGAAATTCAACAGCAGATTGTTCG...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATTTCAGGCCAATACTTaGTCCTCAGACAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: DVLALLVFACLKDSISGQFQANT*SSDKLG
Trigger: TCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAA...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACAAAGTTTCCAGGTCCTaGGGCTTGACTCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: VLALLVFACLKDSISGQYKVSRS*GLTLLR
Trigger: CCTTAGAAGAGTCAAGCCTCAGGACCTGGAAACTTT...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR TCA 90 bp ACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCTTATACTCTATGACATaGTCACTGGCCACCTTAGAA +
Preference number: 4 (lower is better)
Translates to: TRAVSIGIPSLFHAKQSSLYSMT*SLATLE
Trigger: TTCTAAGGTGGCCAGTGATCATGTCATAGAGTATAA...GGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp ACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATGGGCTCAAGATATCCTaGCTTAATCCTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: TCLPCLSLLVLRTLFQANGLKIS*LNPQCG
Trigger: GCCACATTGAGGATTAAGTCAGGATATCTTGAGCCC...ATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCTCTGCCAACTTCCACTaGAACACGCAGATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: ALLVFACLKDSISGQYLISANFH*NTQMEN
Trigger: GTTCTCCATCTGCGTGTTTCAGTGGAAGTTGGCAGA...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ATCCACACAAAATACAAAGTAGAGGGTAGCATAGTGCCGGTAGATCAGTTTGTACGCCTGAATCATCTTTaGCAGCCACGGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: IHTKYKVEGSIVPVDQFVRLNHL*QPRFSQ
Trigger: CTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCG...TACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR GCA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACAGGCTGCCAGTCCGATaGACTATATCCCAACAATCT +
Preference number: 4 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNRLPVR*TISQQS
Trigger: AGATTGTTGGGATATAGTGCATCGGACTGGCAGCCT...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp AGGAAGCAAATACTGATGTTTATGTGTTTGCAAAGGAACGTGTTGGGAAAATTCATCACTTCCGGTTGGTaGGCTGCTGAGAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: RKQILMFMCLQRNVLGKFITSGW*AAESGT
Trigger: AGTGCCGCTCTCAGCAGCGCACCAACCGGAAGTGAT...GAATTTTCCCAACACGTTCCTTTGCAAACACATAAACATCAGTATTTGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CCA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACAGCCGTGGCTTCCCATaGTTGTTGAAAACCAGAATC +
Preference number: 4 (lower is better)
Translates to: VLALLVFACLKDSISGQYSRGFP*LLKTRI
Trigger: GATTCTGGTTTTCAACAACCATGGGAAGCCACGGCT...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CCA 90 bp TGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACCTAGTGAGGAGGTTCTaGGAAGCAGGTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CTLSIWKIKSNSHTFSKHLVRRF*EAGGPA
Trigger: AGCAGGCCCACCTGCTTCCCAGAACCTCCTCACTAG...GTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CCA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACTCAAGAAGAGGGATGTaGCTCTGGATTTGTGACCCT +
Preference number: 4 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNSRRGM*LWICDP
Trigger: AGGGTCACAAATCCAGAGCCACATCCCTCTTCTTGA...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 72 bp GGGTTCTGTTTCCAGACGTGCTTGCCTTGCTTGTCTTaGCTTGTCTTAAGGACTCTATTTCAGGCCAATACT +
Preference number: 4 (lower is better)
Translates to: GFCFQTCLPCLS*LVLRTLFQANT
Trigger: AGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CAA 72 bp CAAAATGGGTTCTGTTTCCAGACGTGCTTGCCTTGCTaGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QNGFCFQTCLPC*SLLVLRTLFQA
Trigger: GGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CAA 72 bp CTTAATACCCATGTACCAATCATTGCTGCATCCTATTaGGAAAGCAATGGACAGACAGCCACGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LNTHVPIIAASY*ESNGQTATLKA
Trigger: GGCTTTCAGCGTGGCTGTCTGTCCATTGCTTTCCAAATAGGATGCAGCAATGATTGGTACATGGGTATTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGAAAACCAGAATCGCCTaGATCATCTTTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLKTRIA*IIFASH
Trigger: GTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTT...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp CTGGAGGATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LEDVVHLIHMEDQIQFTHASHGC*KPESPE
Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGC...GTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATCCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR TCA 90 bp AGTAATGCATTAAACCACGTAACAAACGAACTCAAGAAGAGGGATGTGGCTCTGTGTTGTCATCCCGCTTaGGGACTAGATGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SNALNHVTNELKKRDVALCCHPA*GLDGKS
Trigger: AGACTTTCCATCTAGTCCTCAAGCGGGATGACAACA...CAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGTGTTGTCATCCCGCTTaGGGACTAGATGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLCCHPA*GLDGKS
Trigger: AGACTTTCCATCTAGTCCTCAAGCGGGATGACAACA...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp ACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATTTTCAGGCCAATACTTaGTCCTCAGACAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: TCLPCLSLLVLRTLFQANFQANT*SSDKLG
Trigger: TCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAA...ATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGCCAGATGTACCTGGATaGGGTCCAAGATTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLPDVPG*GPRFQV
Trigger: AACTTGGAATCTTGGACCTCATCCAGGTACATCTGG...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558011.5
CDS-3UTR TCA 90 bp AAAGTAGAGGGTAGCATAGTGCCGGTAGATCAGTTTGTAGTCAGAGCCACCAATCGAACAATCTGCTGTTaGATTTCTTCTGGTCACGAA +
Preference number: 4 (lower is better)
Translates to: KVEGSIVPVDQFVVRATNRTICC*ISSGHE
Trigger: TTCGTGACCAGAAGAAATTCAACAGCAGATTGTTCG...ATTGGTGGCTCTGACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557999.5
CDS-3UTR GCA 90 bp AAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGTCTGCAGTGGCCGTATaGATCAGAGAACGGCATGAC +
Preference number: 4 (lower is better)
Translates to: KYSIYHKVTDCGLHKFRLSAVAV*IRERHD
Trigger: GTCATGCCGTTCTCTGATGCATACGGCCACTGCAGA...CAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCGGCTGGAAACTTTACTaGGAAGCAGCCCTCATCTTA +
Preference number: 4 (lower is better)
Translates to: ALLVFACLKDSISGQYLIGWKLY*EAALIL
Trigger: TAAGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCC...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCGCACTCTGTCAAAGATaGTCACAGAGACAACAGGAG +
Preference number: 4 (lower is better)
Translates to: ALLVFACLKDSISGQYLIALCQR*SQRQQE
Trigger: CTCCTGTTGTCTCTGTGAGCATCTTTGACAGAGTGC...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ATGTTGAGATCGCCAATGTTGATGTTCCGAGGAATCTCTGGCAGGTTGATGTTTCTGTTGAATTTCTTCTaGGAAACGCTGGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: MLRSPMLMFRGISGRLMFLLNFF*ETLVEA
Trigger: CGCTTCTACCAGCGTTTCCCAGAAGAAATTCAACAG...AAACATCAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CCA 90 bp ACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATCTGTTGAATTTCTTCTaGGAAACGCTGGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: TCLPCLSLLVLRTLFQANLLNFF*ETLVEA
Trigger: CGCTTCTACCAGCGTTTCCCAGAAGAAATTCAACAG...ATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CCA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACCGCTTGAGGACTAGATaGAAAGTCTCTCGAACAATC +
Preference number: 4 (lower is better)
Translates to: VLALLVFACLKDSISGQYRLRTR*KVSRTI
Trigger: GATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCG...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CCA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACGTTCCGAGGAATCTCTaGCAGGTTGATGTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: VLALLVFACLKDSISGQYVPRNL*QVDVFH
Trigger: GTGAAAAACATCAACCTGCCAGAGATTCCTCGGAAC...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CCA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCAGAGGGATGTGGCTCTaGATTTGTGACCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: ALLVFACLKDSISGQYLIRGMWL*ICDPQH
Trigger: ATGTTGAGGGTCACAAATCCAGAGCCACATCCCTCT...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACACTTCCAGATGTACCTaGATGAGGTCCAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: VLALLVFACLKDSISGQYTSRCT*MRSKIP
Trigger: TGGAATCTTGGACCTCATCCAGGTACATCTGGAAGT...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558011.5
3UTR CAA 72 bp GGCTCAAAATGGGTTCTGTTTCCAGACGTGCTTGCCTaGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: GSKWVLFPDVLA*LVFACLKDSIS
Trigger: TGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
3UTR CAA 72 bp TCAACATCAGTTAAATGGAGGGACACAGACGACTCTTaGGCTCTTATACTCTATGACATGATCACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: STSVKWRDTDDS*ALILYDMITGH
Trigger: GTGGCCAGTGATCATGTCATAGAGTATAAGAGCCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp TGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTCGAACAATCTGCTGTTaGATTTCTTCTGGGAAACGC +
Preference number: 4 (lower is better)
Translates to: CLPCLSLLVLRTLFQANTRTICC*ISSGKR
Trigger: GCGTTTCCCAGAAGAAATTCAACAGCAGATTGTTCG...AGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGTTTCAGGCCAATACTTaGTCCTCAGACAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLFQANT*SSDKLG
Trigger: TCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAA...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR TCA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGTATGTGGCAGAGGCCTaGATAAACAGGGATTTGAGA +
Preference number: 4 (lower is better)
Translates to: LALLVFACLKDSISGQYLYVAEA*INRDLR
Trigger: TCTCAAATCCCTGTTTATTCAGGCCTCTGCCACATA...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp AGGAAGCAAATACTGATGTTTATGTGTTTGCAAAGGAACGTGTTGGGAAAATTCGGTGGAGCTGAAGCCTaGACACGTTTTCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: RKQILMFMCLQRNVLGKFGGAEA*TRFLAL
Trigger: AAGAGCCAGAAAACGTGTTCAGGCTTCAGCTCCACC...GAATTTTCCCAACACGTTCCTTTGCAAACACATAAACATCAGTATTTGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR GCA 90 bp CCTCTAAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCACGCCTGAATCATCTTTaGCAGCCACGGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PLNIPYITKLLTAVSTNSRLNHL*QPRFSQ
Trigger: CTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCG...TGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp AAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGAGAGAACGGCATGACTaGACATGTGAGAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: KYSIYHKVTDCGLHKFRLRERHD*TCENWV
Trigger: CACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCT...CAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp TTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCCTCAGACAAACTAGAGAACGGCATGACTaGACATGTGAGAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: FACLKDSISGQYLILRQTRERHD*TCENWV
Trigger: CACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCT...AGTTTGTCTGAGGATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR GCA 90 bp AGTAATGCATTAAACCACGTAACAAACGAACTCAAGAAGAGGGATGTGGCTCTGTCATTTTCATGGAACTaGTTCCCTATAGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SNALNHVTNELKKRDVALSFSWN*FPIGAC
Trigger: ACAGGCCCCTATAGGGAAGCAGTTCCATGAAAATGA...CAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp TGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTCTGTTGAATTTCTTCTaGGAAACGCTGGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: CLPCLSLLVLRTLFQANTLLNFF*ETLVEA
Trigger: CGCTTCTACCAGCGTTTCCCAGAAGAAATTCAACAG...AGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CCA 90 bp CCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACTGTTGAATTTCTTCTaGGAAACGCTGGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: PGGCSAPYPYGRSNPIHTLLNFF*ETLVEA
Trigger: CGCTTCTACCAGCGTTTCCCAGAAGAAATTCAACAG...TGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATCCTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423566.6
ENST00000558999.5
CDS-3UTR CCA 90 bp CTTGGGCTTCGGCTTCAACATCAGTTAAATGGAGGGACACAGACGACTCTTTGGAAAACCATTGGTTTCTaGCAGGCAAAACATTCAAAA +
Preference number: 4 (lower is better)
Translates to: LGLRLQHQLNGGTQTTLWKTIGF*QAKHSK
Trigger: TTTTGAATGTTTTGCCTGCCAGAAACCAATGGTTTT...CCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATGCCCTTACTAGAGACTaGTCCACAAGATCAGATTTA +
Preference number: 4 (lower is better)
Translates to: TCLPCLSLLVLRTLFQANALTRD*STRSDL
Trigger: TAAATCTGATCTTGTGGACCAGTCTCTAGTAAGGGC...ATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 72 bp AGCAGAAATGTGTTGGGCATGAGCCAGGTTTATGATTaGGATTGTGTCCTGCACATAACACCTGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: SRNVLGMSQVYD*DCVLHITPVRI
Trigger: TATTCTCACAGGTGTTATGTGCAGGACACAATCCAAATCATAAACCTGGCTCATGCCCAACACATTTCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
3UTR CAA 72 bp GTTTTATGTCATTGTAAGAGGCCATGTGAGGGATGTTaGGATGCTCGCTTTGAATCTGTAGGACCACTCAAT +
Preference number: 4 (lower is better)
Translates to: VLCHCKRPCEGC*DARFESVGPLN
Trigger: ATTGAGTGGTCCTACAGATTCAAAGCGAGCATCCAAACATCCCTCACATGGCCTCTTACAATGACATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp ATGACCCAGGAATTGCACTTATCCATATGGAAGATCAAATCCAATTCACACACAGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: MTQELHLSIWKIKSNSHTASHGC*KPESPE
Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGC...TGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCCTGGGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR TCA 90 bp AAACTGATTTTCTTCAACCCTAAGAGTGAAGGGTATCTAGTCTCTGGAAAGTCCTACGTAATCACTTATTaGGCCCTTATGCGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KLIFFNPKSEGYLVSGKSYVITY*ALMRQH
Trigger: ATGCTGCCGCATAAGGGCTCAATAAGTGATTACGTA...GGACTTTCCAGAGACTAGATACCCTTCACTCTTAGGGTTGAAGAAAATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR GCA 90 bp AGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCACAACGCCTGAATCATCTTTaGCAGCCACGGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RSNPIHTHFRNTYPEFPQRLNHL*QPRFSQ
Trigger: CTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCG...TTGTGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
ENST00000560251.1
CDS-3UTR GCA 90 bp AGTAATGCATTAAACCACGTAACAAACGAACTCAAGAAGAGGGATGTGGCTCTGCAGCAACAAACCTTCTaGTCTCATGAGGAGAATGTA +
Preference number: 4 (lower is better)
Translates to: SNALNHVTNELKKRDVALQQQTF*SHEENV
Trigger: TACATTCTCCTCATGAGAGCAGAAGGTTTGTTGCTG...CAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACACACAGACGACTCTTTaGCTCTTATACTCTATGACA +
Preference number: 4 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNTQTTL*LLYSMT
Trigger: TGTCATAGAGTATAAGAGCCAAAGAGTCGTCTGTGT...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp AAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGCCACAAAAACCTGGATaGGGTCCAAGATTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: KYSIYHKVTDCGLHKFRLPQKPG*GPRFQV
Trigger: AACTTGGAATCTTGGACCTCATCCAGGTTTTTGTGG...CAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR TCA 90 bp AGTAATGCATTAAACCACGTAACAAACGAACTCAAGAAGAGGGATGTGGCTCTGCGATCTCCTTTATTCTaGTCTCACATTCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: SNALNHVTNELKKRDVALRSPLF*SHIQQM
Trigger: CATTTGCTGAATGTGAGATCAGAATAAAGGAGATCG...CAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTTAATGCATTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCCCATGTACCAATCATTaGTGCATCCTATTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALLVFACLKDSISGQYLIPCTNH*CILFGK
Trigger: CTTTCCAAATAGGATGCAGCAATGATTGGTACATGG...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp GGAATTGCACTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAACTGCTGGTGCTTTTGTaGTTCCTTCTAGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GIALIHMEDQIQFTHIFELLVLL*FLLEAC
Trigger: ACAGGCCTCTAGAAGGAAGCACAAAAGCACCAGCAG...TTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR CCA 90 bp ATGACCCAGGAATTGCACTTATCCATATGGAAGATCAAATCCAATTCACACACACTGTTGAATTTCTTCTaGGAAACGCTGGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: MTQELHLSIWKIKSNSHTLLNFF*ETLVEA
Trigger: CGCTTCTACCAGCGTTTCCCAGAAGAAATTCAACAG...TGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCCTGGGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR CCA 90 bp GAGGATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTGTTCCGAGGAATCTCTaGCAGGTTGATGTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: EDVVHLIHMEDQIQFTHIVPRNL*QVDVFH
Trigger: GTGAAAAACATCAACCTGCCAGAGATTCCTCGGAAC...AATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423566.6
ENST00000557999.5
CDS-3UTR TCA 90 bp GATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCCGAACAATCTGCTGTTaGATTTCTTCTGGGAAACGC +
Preference number: 4 (lower is better)
Translates to: DVVHLIHMEDQIQFTHIFRTICC*ISSGKR
Trigger: GCGTTTCCCAGAAGAAATTCAACAGCAGATTGTTCG...GAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423566.6
ENST00000558999.5
CDS-3UTR TCA 90 bp ACCCAGGAATTGCACTTATCCATATGGAAGATCAAATCCAATTCACACACATTTCGAACAATCTGCTGTTaGATTTCTTCTGGGAAACGC +
Preference number: 4 (lower is better)
Translates to: TQELHLSIWKIKSNSHTFRTICC*ISSGKR
Trigger: GCGTTTCCCAGAAGAAATTCAACAGCAGATTGTTCG...AAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCCTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR TCA 90 bp ATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGTGTTGTCATCCCGCTTaGGGACTAGATGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: IHMEDQIQFTHIFETLIQCCHPA*GLDGKS
Trigger: AGACTTTCCATCTAGTCCTCAAGCGGGATGACAACA...CTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
ENST00000560251.1
CDS-3UTR TCA 90 bp TGCACTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTGTTGTCATCCCGCTTaGGGACTAGATGGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: CTYPYGRSNPIHTHFRNTCCHPA*GLDGKS
Trigger: AGACTTTCCATCTAGTCCTCAAGCGGGATGACAACA...AGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR TCA 90 bp GTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACCACAAAAACCTGGATaGGGTCCAAGATTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: VHLIHMEDQIQFTHIFETPQKPG*GPRFQV
Trigger: AACTTGGAATCTTGGACCTCATCCAGGTTTTTGTGG...TGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR TCA 90 bp CCTCTAAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCACATGAGCCAGGTTTATaGTTTGGATTGTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PLNIPYITKLLTAVSTNSHEPGL*FGLCPA
Trigger: TGCAGGACACAATCCAAATCATAAACCTGGCTCATG...TGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ATAAACGCCGATCTCCTTTATTCTGATCTCACATTCAGCAAATGTGAGAGAAATCACTGCCCATCTCTGTaGTTATCATGGAGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: INADLLYSDLTFSKCERNHCPSL*LSWSFQ
Trigger: TTGAAAGCTCCATGATAAGCACAGAGATGGGCAGTG...ATTTCTCTCACATTTGCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp CCTCTAAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGCCTGTTTTCGTATCTaGCAACTTCCACTGAAACAC +
Preference number: 4 (lower is better)
Translates to: PLNIPYITKLLTAVSTNSACFRI*QLPLKH
Trigger: GTGTTTCAGTGGAAGTTGGCAGATACGAAAACAGGC...TGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp GGATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCAGTTTGTAGGGTGTTaGACTGGCTTTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GCSAPYPYGRSNPIHTHFQFVGC*TGFSSS
Trigger: AGAGGAAGAAAAGCCAGTGCAACACCCTACAAACTG...AAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423566.6
ENST00000558999.5
CDS-3UTR CCA 90 bp GAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCACCGCTTGAGGACTAGATaGAAAGTCTCTCGAACAATC +
Preference number: 4 (lower is better)
Translates to: EDQIQFTHIFETLIQSFHRLRTR*KVSRTI
Trigger: GATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCG...GTGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
ENST00000560251.1
CDS-3UTR CCA 90 bp ATAAACGCCGATCTCCTTTATTCTGATCTCACATTCAGCAAATGTGAGAGAAATAGAGGCTCTCCAGTTTaGCTATTGCTAAACTTGGAC +
Preference number: 4 (lower is better)
Translates to: INADLLYSDLTFSKCERNRGSPV*LLLNLD
Trigger: GTCCAAGTTTAGCAATAGCCAAACTGGAGAGCCTCT...ATTTCTCTCACATTTGCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CCA 90 bp GTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAATGTAGGGTGTTGCACTaGCTTTTCTTCCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VVHLIHMEDQIQFTHIFECRVLH*LFFLSL
Trigger: AAGAGAGAGGAAGAAAAGCCAGTGCAACACCCTACA...TTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423566.6
ENST00000558999.5
CDS-3UTR TCA 90 bp CCTCTAAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCATATATCCCAACAATCTaGGCACTCTGTCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: PLNIPYITKLLTAVSTNSYIPTI*ALCQRC
Trigger: GCATCTTTGACAGAGTGCTCAGATTGTTGGGATATA...TGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR GCA 90 bp ATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCAGTTTGTAGGGTGTTaGACTGGCTTTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: MEDQIQFTHIFETLIQSFQFVGC*TGFSSS
Trigger: AGAGGAAGAAAAGCCAGTGCAACACCCTACAAACTG...GAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423566.6
ENST00000558999.5
ENST00000560251.1
CDS-3UTR CCA 90 bp ATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGCGCTTGAGGACTAGATaGAAAGTCTCTCGAACAATC +
Preference number: 4 (lower is better)
Translates to: IHMEDQIQFTHIFETLIQRLRTR*KVSRTI
Trigger: GATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCG...CTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
ENST00000560251.1
CDS-3UTR CCA 90 bp AGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCACAAGTTCCGAGGAATCTCTaGCAGGTTGATGTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RSNPIHTHFRNTYPEFPQVPRNL*QVDVFH
Trigger: GTGAAAAACATCAACCTGCCAGAGATTCCTCGGAAC...TTGTGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423566.6
ENST00000557999.5
CDS-3UTR CCA 90 bp ATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGTGTAGGGTGTTGCACTaGCTTTTCTTCCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: IHMEDQIQFTHIFETLIQCRVLH*LFFLSL
Trigger: AAGAGAGAGGAAGAAAAGCCAGTGCAACACCCTACA...CTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423566.6
ENST00000558999.5
ENST00000560251.1
CDS CCA 90 bp CGCTCACGAGCCCTAGCACCCAAGGGTCCGGCCTCTCTGACGCCTTaGAGGGCAGGTGCGGATGCCGAGGAGAGTGGTCACCTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: RSRALAPKGPASLTP*RAGADAEESGHLGQ
Trigger: CTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGCCCTCCAAGGCGTCAGAGAGGCCGGACCCTTGGGTGCTAGGGCTCGTGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 90 bp ACCCAAGGGTCCGGCCTCTCTGACGCCTTGGAGGGCAGGTGCGGATaGCGAGGAGAGTGGTCACCTCGGCCAGCGTTGGTTGGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: TQGSGLSDALEGRCG*RGEWSPRPALVGQS
Trigger: TGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGCCCTCCAAGGCGTCAGAGAGGCCGGACCCTTGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 90 bp CGAGGAGAGTGGTCACCTCGGCCAGCGTTGGTTGGCCAGTCAGGATaGGAATCCGGATCTATGTCCCTCGCCCAGACCGACGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RGEWSPRPALVGQSG*ESGSMSLAQTDGWP
Trigger: GGGCCAGCCGTCGGTCTGGGCGAGGGACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 90 bp GGCCTCTCTGACGCCTTGGAGGGCAGGTGCGGATGCCGAGGAGAGTaGTCACCTCGGCCAGCGTTGGTTGGCCAGTCAGGATGCGAATCC +
Preference number: 5 (lower is better)
Translates to: GLSDALEGRCGCRGE*SPRPALVGQSGCES
Trigger: GGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGCCCTCCAAGGCGTCAGAGAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS TCA 90 bp CTCCTCCTTCCGCCACAACACGATCACTTCCGGTTGGTGCGCTGCTaGGAGCGGCACTCGGAAACTTGGCCCCGGCGCTCACGAGCCCTA +
Preference number: 5 (lower is better)
Translates to: LLLPPQHDHFRLVRC*ERHSETWPRRSRAL
Trigger: TAGGGCTCGTGAGCGCCGGGGCCAAGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCGGAAGTGATCGTGTTGTGGCGGAAGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 90 bp AGGGCAGGTGCGGATGCCGAGGAGAGTGGTCACCTCGGCCAGCGTTaGTTGGCCAGTCAGGATGCGAATCCGGATCTATGTCCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: RAGADAEESGHLGQR*LASQDANPDLCPSP
Trigger: GGGCGAGGGACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 90 bp AACGACCGTCAGCCGGGTTGCCAAAACGGAGAGGCGGCGGGAGCTTaGTTTTCTCACCGCCCGCTCCAAATCATGCACTCCCGCCATCCC +
Preference number: 5 (lower is better)
Translates to: NDRQPGCQNGEAAGA*FSHRPLQIMHSRHP
Trigger: GGGATGGCGGGAGTGCATGATTTGGAGCGGGCGGTGAGAAAAGCAAGCTCCCGCCGCCTCTCCGTTTTGGCAACCCGGCTGACGGTCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 90 bp CCAGAAAGCTCCTCCTTCCGCCACAACACGATCACTTCCGGTTGGTaGGCTGCTGAGAGCGGCACTCGGAAACTTGGCCCCGGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: PESSSFRHNTITSGW*AAESGTRKLGPGAH
Trigger: GTGAGCGCCGGGGCCAAGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCGGAAGTGATCGTGTTGTGGCGGAAGGAGGAGCTTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 90 bp TCAGGATGCGAATCCGGATCTATGTCCCTCGCCCAGACCGACGGCTaGCCCCAGAAGCCGAAACGACCGTCAGCCGGGTTGCCAAAACGG +
Preference number: 5 (lower is better)
Translates to: SGCESGSMSLAQTDG*PQKPKRPSAGLPKR
Trigger: CCGTTTTGGCAACCCGGCTGACGGTCGTTTCGGCTTCTGGGGCCAGCCGTCGGTCTGGGCGAGGGACATAGATCCGGATTCGCATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 90 bp CAGGTGCGGATGCCGAGGAGAGTGGTCACCTCGGCCAGCGTTGGTTaGCCAGTCAGGATGCGAATCCGGATCTATGTCCCTCGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: QVRMPRRVVTSASVG*PVRMRIRIYVPRPD
Trigger: GTCTGGGCGAGGGACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 90 bp CTCCCAGAAAGCTCCTCCTTCCGCCACAACACGATCACTTCCGGTTaGTGCGCTGCTGAGAGCGGCACTCGGAAACTTGGCCCCGGCGCT +
Preference number: 5 (lower is better)
Translates to: LPESSSFRHNTITSG*CAAESGTRKLGPGA
Trigger: AGCGCCGGGGCCAAGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCGGAAGTGATCGTGTTGTGGCGGAAGGAGGAGCTTTCTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGTGTAGTGGTGCGATCTaGGCTCACTGCAAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: QGWGATVQGDGEALLPGECSGAI*AHCKLC
Trigger: GCAGAGCTTGCAGTGAGCCAAGATCGCACCACTACA...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp TCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGACCCACGGGGCCTCTCTGACGCCTaGGAGGGCAGGTGCGGATGC +
Preference number: 5 (lower is better)
Translates to: SSRHTPHCRFYLVPRDPRGLSDA*EGRCGC
Trigger: GCATCCGCACCTGCCCTCCAAGGCGTCAGAGAGGCC...CCGTGGGTCTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGTCGCCTGAATCATCTTaGCCAGCCACGGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: QGWGATVQGDGEALLPGESPESS*PATVLS
Trigger: TGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGA...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGAAATTCTGCCCTTACTaGCCACTCACCACACCCCCA +
Preference number: 5 (lower is better)
Translates to: QGWGATVQGDGEALLPGEKFCPY*PLTTPP
Trigger: TGGGGGTGTGGTGAGTGGCAAGTAAGGGCAGAATTT...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp GGGCACCCTCTCAGACCTGCCCTGCAACAGCATCAGGAGGCTGAGGGTCCCCAGGGATCGGAGGCTGTATaGAGCAGTGGGCACAAACCA +
Preference number: 5 (lower is better)
Translates to: GHPLRPALQQHQEAEGPQGSEAV*SSGHKP
Trigger: TGGTTTGTGCCCACTGCTCAATACAGCCTCCGATCC...CTGGGGACCCTCAGCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS CCA 90 bp TGCACTCCCGCCATCCCCTTAGCGCTCGCAGAACGTTCCGCGGAGTaGAGACGCCGGTCATTCGGCCGTTCGTCGGTTATGGAACATTTC +
Preference number: 5 (lower is better)
Translates to: CTPAIPLALAERSAE*RRRSFGRSSVMEHF
Trigger: GAAATGTTCCATAACCGACGAACGGCCGAATGACCGGCGTCTCCACTCCGCGGAACGTTCTGCGAGCGCTAAGGGGATGGCGGGAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp ATGTCCAGGCCCCACAAGGGTGACCCTGGCTCAGGTTCTCATGCTCCAGAAGCTAGGAAGGTGGGCTGTTaGGGGTATGGCCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: MSRPHKGDPGSGSHAPEARKVGC*GYGPAG
Trigger: CCCTGCTGGGCCATACCCCAAACAGCCCACCTTCCT...AGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp TCAAGTTCTCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGGCGGCACTCGGAAACTaGGCCCCGGCGCTCACGAGC +
Preference number: 5 (lower is better)
Translates to: SSSHRGTLPTVASISFPEAALGN*APALTS
Trigger: GCTCGTGAGCGCCGGGGCCAAGTTTCCGAGTGCCGC...CTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGAGAACTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp TCAAGTTCTCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGAGAGGCGGCGGGAGCTaGCTTTTCTCACCGCCCGCT +
Preference number: 5 (lower is better)
Translates to: SSSHRGTLPTVASISFPERGGGS*LFSPPA
Trigger: AGCGGGCGGTGAGAAAAGCAAGCTCCCGCCGCCTCT...CTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGAGAACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp CAGGGCTGGGGTGCCACTGTACAGGGTGATGGGGAGGCCCTCCTCCCTGGAGAGAAGATGTTTATGGCTTaGCTGATAGCAGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: QGWGATVQGDGEALLPGEKMFMA*LIAGWK
Trigger: TTTCCAGCCTGCTATCAGCAAAGCCATAAACATCTT...CTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGCACCCCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp ATCTCGTTCCCAGAGACCCACGGGAAAATGTCACAAAATGGCACAGAAATGCCACGACCGTCAGCCGGGTaGCCAAAACGGAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: ISFPETHGKMSQNGTEMPRPSAG*PKRRGG
Trigger: GCCGCCTCTCCGTTTTGGCAACCCGGCTGACGGTCG...TGGCATTTCTGTGCCATTTTGTGACATTTTCCCGTGGGTCTCTGGGAACGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp GAATGTGACTTCAATCACTCAAGTTCTCATCGAGGCACACTCCCCACTGTCGCTTCACCTCGGCCAGCGTaGGTTGGCCAGTCAGGATGC +
Preference number: 5 (lower is better)
Translates to: ECDFNHSSSHRGTLPTVASPRPA*VGQSGC
Trigger: GCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGA...AGCGACAGTGGGGAGTGTGCCTCGATGAGAACTTGAGTGATTGAAGTCACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 90 bp CCCCGATCCTACCTGTGTCTTCTGGAGCAACACAGAGTAAGTCCCTaGCCTCTACCCTGGGATTCTATCACTCTGCCTAAGGCAACCACA +
Preference number: 5 (lower is better)
Translates to: PRSYLCLLEQHRVSP*PLPWDSITLPKATT
Trigger: TGTGGTTGCCTTAGGCAGAGTGATAGAATCCCAGGGTAGAGGGCAGGGACTTACTCTGTGTTGCTCCAGAAGACACAGGTAGGATCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558186.1
CDS-3UTR CAA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCCGTGGCTTCCCATGGTaGTTGAAAACCAGAATCGCC +
Preference number: 5 (lower is better)
Translates to: QWPYASENGMTAHVRTGCRGFPW*LKTRIA
Trigger: GGCGATTCTGGTTTTCAACAACCATGGGAAGCCACG...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTTTTCTCCAGCCTGTTTaGAGCCTCAATCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTFLQPV*SLNLSH
Trigger: GTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAA...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp GAAGGCCCAAGAGGGGCCCAGGCTGGAAACTTTACTGCGAAGCAGCCCTCATCTAAAGGTGCAAATGACTaGGGCATGTTGACTCCCTAC +
Preference number: 5 (lower is better)
Translates to: EGPRGAQAGNFTAKQPSSKGAND*GMLTPY
Trigger: GTAGGGAGTCAACATGCCCAAGTCATTTGCACCTTT...AGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp ATGTCCAGGCCCCACAAGGGTGACCCTGGCTCAGGTTCTCATGCTCCAGAAGCTCAGAGGCTCTCCAGTTaGGCTATTGCTAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: MSRPHKGDPGSGSHAPEAQRLSS*AIAKLG
Trigger: TCCAAGTTTAGCAATAGCCAAACTGGAGAGCCTCTG...AGCTTCTGGAGCATGAGAACCTGAGCCAGGGTCACCCTTGTGGGGCCTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS TCA 90 bp GGAAACGCTGGTAGAAGCGGACTAGCCGTGGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAATCATCTTTGCCAGCCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: GNAGRSGLAVASHGC*KPESPESSLPATVL
Trigger: GAGAACCGTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGCCACGGCTAGTCCGCTTCTACCAGCGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
ENST00000558999.5
ENST00000560184.5
ENST00000560251.1
ENST00000560940.5
CDS TCA 90 bp CGAAACGCTGGTAGAAGCGGACTAGCCGTGGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAATCATCTTTGCCAGCCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RNAGRSGLAVASHGC*KPESPESSLPATVL
Trigger: GAGAACCGTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGCCACGGCTAGTCCGCTTCTACCAGCGTTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000617003.1
CDS-3UTR CAA 90 bp CCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGATCGCCTGAATCATCTTaGCCAGCCACGGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PSHPSPPPGGCSAPYPYGSPESS*PATVLS
Trigger: TGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGA...TCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp TCAAGTTCTCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGCGTGGCTTCCCATGGTaGTTGAAAACCAGAATCGCC +
Preference number: 5 (lower is better)
Translates to: SSSHRGTLPTVASISFPERGFPW*LKTRIA
Trigger: GGCGATTCTGGTTTTCAACAACCATGGGAAGCCACG...CTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGAGAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTATGTTGTCATCCCGCTaGAGGACTAGATGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTMLSSR*RTRWKV
Trigger: GACTTTCCATCTAGTCCTCAAGCGGGATGACAACAT...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTACGTGCTTGCCTTGCTaGTCTTTGCTTGTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTTCLPC*SLLVLR
Trigger: CCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp CCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTTCCCCAGCCTAGAACTGAGCTaGGCCCTCACCAGGCACTTA +
Preference number: 5 (lower is better)
Translates to: PSSVNRNPFPIPCQTVFPSLELS*ALTRHL
Trigger: TAAGTGCCTGGTGAGGGCCAAGCTCAGTTCTAGGCT...GGGGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp TCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATCGCCTGAATCATCTTaGCCAGCCACGGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SHPSPPPGGCSAPYPYGRSPESS*PATVLS
Trigger: TGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGA...TCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp CCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATTCGCCTGAATCATCTTaGCCAGCCACGGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PTHHHLLEDVVHLIHMEDSPESS*PATVLS
Trigger: TGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGA...ATCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp TTACTTGCCACTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATTTCTCCAGCCTGTTTaGAGCCTCAATCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LLATHHTPRSEGPALFYLFLQPV*SLNLSH
Trigger: GTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAA...TAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTGGCAAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp CTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCAGACAGGTTGGGAACTTaGATGTTGAGATCGCCAATG +
Preference number: 5 (lower is better)
Translates to: LTTPPDLKGQPFSTYDTSDRLGT*MLRSPM
Trigger: CATTGGCGATCTCAACATCAAAGTTCCCAACCTGTC...TGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTACAAACTGGGACAGGTaGGGAACTTTGATGTTGAGA +
Preference number: 5 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTTNWDR*GTLMLR
Trigger: TCTCAACATCAAAGTTCCCAACCTGTCCCAGTTTGT...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp AACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAACTGAAAACCCAGTATTaGGCCAGGTCCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: NWVHPSSVNRNPFPIPCQLKTQY*ARSSGS
Trigger: TGAGCCACTGGACCTGGCCAAATACTGGGTTTTCAG...TTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp GGGCCCCTCACATCTGCAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACACCCATGTACCAATCATaGCTGCATCCTATTTGGAAA +
Preference number: 5 (lower is better)
Translates to: GPLTSAVAVCIRERHDCTPMYQS*LHPIWK
Trigger: TTTCCAAATAGGATGCAGCAATGATTGGTACATGGG...TGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp ATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGACCCACGGGACTGATGTTTATGTGTTaGCAAAGGAACGTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: IEAHSPLSLLSRSQRPTGLMFMC*QRNVLG
Trigger: TCCCAACACGTTCCTTTGCAAACACATAAACATCAG...TCCCGTGGGTCTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS TCA 90 bp TTGGGGGCATGGTGGCTATTAATGAGCCAAAGGGTAACGACGCTCTaGGGTGACTCAGCACTGACGGGAAGAGAAAATCATCTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: LGAWWLLMSQRVTTL*GDSALTGRENHLRV
Trigger: GACTCTCAGATGATTTTCTCTTCCCGTCAGTGCTGAGTCACCTCAGAGCGTCGTTACCCTTTGGCTCATTAATAGCCACCATGCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561410.5
CDS GCA 90 bp CACCCATCACCACCTCCTGGAGGATGTAGTGCACCTCTTTCCCAGTaGAGGATTCTGTTCTTTGGCTCCTGCAACAGTATAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: HPSPPPGGCSAPLSQ*RILFFGSCNSIDPS
Trigger: TGAAGGATCTATACTGTTGCAGGAGCCAAAGAACAGAATCCTGCACTGGGAAAGAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558186.1
CDS-3UTR CAA 90 bp ACATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCGTGGCTTCCCATGGTaGTTGAAAACCAGAATCGCC +
Preference number: 5 (lower is better)
Translates to: TCENWVHPSSVNRNPFPIRGFPW*LKTRIA
Trigger: GGCGATTCTGGTTTTCAACAACCATGGGAAGCCACG...AATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp CAGTGGCCGTATGCATCAGAGAACGGCATGACTGCACATGTGAGAACTGGGTGCAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: QWPYASENGMTAHVRTGCKKLQM*SSRLRT
Trigger: AGTCCTCAAGCGGGATGACAACATCTGTAACTTCTT...GCACCCAGTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp ACCCTTGGGAGCATCCATGTGAGAGGTAAAGGTGCAAATGACTTGGGCATGTTGAAATTCTGCCCTTACTaGCCACTCACCACACCCCCA +
Preference number: 5 (lower is better)
Translates to: TLGSIHVRGKGANDLGMLKFCPY*PLTTPP
Trigger: TGGGGGTGTGGTGAGTGGCAAGTAAGGGCAGAATTT...CAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp ATGATCCTAGTGGGCCGAGGTCAACCGCCAGGGTCAAACGGAACACAACCCACTGGGATGTTTCACATGTaGTCAGCTTTAACCTTCTAC +
Preference number: 5 (lower is better)
Translates to: MILVGRGQPPGSNGTQPTGMFHM*SALTFY
Trigger: GTAGAAGGTTAAAGCTGACAACATGTGAAACATCCC...AGTGGGTTGTGTTCCGTTTGACCCTGGCGGTTGACCTCGGCCCACTAGGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS TCA 90 bp CAACAGTATAGATCCTTCACTCTGGTGACAGATCCTTCGCCTCCATaGAGAGAGCTCACTACTGTTTCCAAGCTGCTCAGTGGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: QQYRSFTLVTDPSPP*RELTTVSKLLSGLL
Trigger: CAACAGCCCACTGAGCAGCTTGGAAACAGTAGTGAGCTCTCTTCATGGAGGCGAAGGATCTGTCACCAGAGTGAAGGATCTATACTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558186.1
CDS-3UTR CAA 90 bp TCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGAATGTTGTCATCCCGCTaGAGGACTAGATGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: SHPSPPPGGCSAPYPYGRMLSSR*RTRWKV
Trigger: GACTTTCCATCTAGTCCTCAAGCGGGATGACAACAT...TCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp GTTTGTTTCCAACACCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACACAAACTGGGACAGGTaGGGAACTTTGATGTTGAGA +
Preference number: 5 (lower is better)
Translates to: VCFQHHPTHHHLLEDVVHTNWDR*GTLMLR
Trigger: TCTCAACATCAAAGTTCCCAACCTGTCCCAGTTTGT...GTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAAACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CAA 90 bp TTACTTGCCACTCACCACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTAATTTCAGGCCAATACTaGATCCTCAGACAAACTGGG +
Preference number: 5 (lower is better)
Translates to: LLATHHTPRSEGPALFYLISGQY*ILRQTG
Trigger: CCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAAT...TAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGTGGTGAGTGGCAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp ACACCCCCAGATCTGAAGGGCCAGCCCTTTTCTACCTATGACACCTCACCAGCATTGCCTTGCTTGTCTTaGCTTGTCTTAAGGACTCTA +
Preference number: 5 (lower is better)
Translates to: TPPDLKGQPFSTYDTSPALPCLS*LVLRTL
Trigger: TAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAA...TGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCCTTCAGATCTGGGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp CATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAAAAGGTGCAAATGACTaGGGCATGTTGACTCCCTAC +
Preference number: 5 (lower is better)
Translates to: HPTHHHLLEDVVHLIHMEKGAND*GMLTPY
Trigger: GTAGGGAGTCAACATGCCCAAGTCATTTGCACCTTT...TTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CAA 90 bp TCAAGTTCTCATCGAGGCACACTCCCCACTGTCGCTTCTATCTCGTTCCCAGAGTTACGTAATCACTTATaGAGCCCTTATGCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SSSHRGTLPTVASISFPELRNHL*SPYAAA
Trigger: TGCTGCCGCATAAGGGCTCAATAAGTGATTACGTAA...CTCTGGGAACGAGATAGAAGCGACAGTGGGGAGTGTGCCTCGATGAGAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS TCA 90 bp GGCATGGTGGCTATTAATGAGCCAAAGGGTAACGACGCTCTGAGGTaGCTCAGCACTGACGGGAAGAGAAAATCATCTGAGAGTCATCTT +
Preference number: 5 (lower is better)
Translates to: GMVAINEPKGNDALR*LSTDGKRKSSESHL
Trigger: AAGATGACTCTCAGATGATTTTCTCTTCCCGTCAGTGCTGAGTCACCTCAGAGCGTCGTTACCCTTTGGCTCATTAATAGCCACCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561410.5
CDS-3UTR CAA 90 bp TACAAAGTAGAGGGTAGCATAGTGCCGGTAGATCAGTTTGTAGTCAGAGCCACCTTTCTCCAGCCTGTTTaGAGCCTCAATCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: YKVEGSIVPVDQFVVRATFLQPV*SLNLSH
Trigger: GTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAA...GGTGGCTCTGACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR CAA 90 bp CATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAATTGAGATCGCCAATGTaGATGTTCCGAGGAATCTCT +
Preference number: 5 (lower is better)
Translates to: HPTHHHLLEDVVHLIHMELRSPM*MFRGIS
Trigger: AGAGATTCCTCGGAACATCAACATTGGCGATCTCAA...TTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CAA 90 bp AACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAATAACATTTACCACCTaGGGCTTCGGCTTCAACATC +
Preference number: 5 (lower is better)
Translates to: NWVHPSSVNRNPFPIPCQITFTT*GFGFNI
Trigger: GATGTTGAAGCCGAAGCCCAAGGTGGTAAATGTTAT...TTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp TTCCAACACCATCCCACCCATCACCACCTCCTGGAGGATGTAGTGCACCTTATCTCGAACAATCTGCTGTaGAATTTCTTGAAACGCTGG +
Preference number: 5 (lower is better)
Translates to: FQHHPTHHHLLEDVVHLISNNLL*NFLKRW
Trigger: CCAGCGTTTCAAGAAATTCAACAGCAGATTGTTCGA...GATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558806.5
CDS-3UTR CAA 90 bp CCTCCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACCGTGGCTTCCCATGGTaGTTGAAAACCAGAATCGCC +
Preference number: 5 (lower is better)
Translates to: PPGGCSAPYPYGRSNPIHRGFPW*LKTRIA
Trigger: GGCGATTCTGGTTTTCAACAACCATGGGAAGCCACG...GTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp TGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAACAGTCTATTTCAGGCCAATACTaGATCCTCAGACAAACTGGG +
Preference number: 5 (lower is better)
Translates to: CTRAVSIGIPSLFHAKQSISGQY*ILRQTG
Trigger: CCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAAT...AGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336418.9
ENST00000423566.6
CDS-3UTR CAA 90 bp AACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTCCATGCCAAATTGCTGCATCCTATTaGGAAAGCAATGGACAGACA +
Preference number: 5 (lower is better)
Translates to: NWVHPSSVNRNPFPIPCQIAASY*ESNGQT
Trigger: TGTCTGTCCATTGCTTTCCAAATAGGATGCAGCAAT...TTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS TCA 90 bp ATTCTGTTCTTTGGCTCCTGCAACAGTATAGATCCTTCACTCTGGTaGCAGATCCTTCGCCTCCATGAAGAGAGCTCACTACTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: ILFFGSCNSIDPSLW*QILRLHEESSLLFP
Trigger: TGGAAACAGTAGTGAGCTCTCTTCATGGAGGCGAAGGATCTGTCACCAGAGTGAAGGATCTATACTGTTGCAGGAGCCAAAGAACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558186.1
CDS-3UTR CAA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCTCGCCTGAATCATCTTaGCCAGCCACGGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ALLVFACLKDSISGQYLISPESS*PATVLS
Trigger: TGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGA...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGCGTGGCTTCCCATGGTaGTTGAAAACCAGAATCGCC +
Preference number: 5 (lower is better)
Translates to: LALLVFACLKDSISGQYLRGFPW*LKTRIA
Trigger: GGCGATTCTGGTTTTCAACAACCATGGGAAGCCACG...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp AAAGTAGAGGGTAGCATAGTGCCGGTAGATCAGTTTGTAGTCAGAGCCACCAATATGTTGTCATCCCGCTaGAGGACTAGATGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: KVEGSIVPVDQFVVRATNMLSSR*RTRWKV
Trigger: GACTTTCCATCTAGTCCTCAAGCGGGATGACAACAT...ATTGGTGGCTCTGACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR CAA 90 bp GGGAACTTTGATGTTGAGATCGCCAATGTTGATGTTCCGAGGAATCTCTGGCAGAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: GNFDVEIANVDVPRNLWQKKLQM*SSRLRT
Trigger: AGTCCTCAAGCGGGATGACAACATCTGTAACTTCTT...CTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACATCAAAGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CAA 90 bp CATAGTGCCGGTAGATCAGTTTGTAGTCAGAGCCACCAATCAAACTTCCACCCTAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: HSAGRSVCSQSHQSNFHPKKLQM*SSRLRT
Trigger: AGTCCTCAAGCGGGATGACAACATCTGTAACTTCTT...AGGGTGGAAGTTTGATTGGTGGCTCTGACTACAAACTGATCTACCGGCACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557999.5
ENST00000558806.5
CDS-3UTR CAA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAAACGTGCTTGCCTTGCTaGTCTTTGCTTGTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: DVLALLVFACLKDSISGQTCLPC*SLLVLR
Trigger: CCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATGTTTCCAGACGTGCTaGCCTTGCTTGTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: DVLALLVFACLKDSISGQCFQTC*PCLSLL
Trigger: AAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACA...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp ACATGTGAGAACTGGGTGCACCCGAGCAGTGTCAATAGGAATCCCTTCCCTATTATTAGCAGAAATGTGTaGGGCATGAGCCAGGTTTAT +
Preference number: 5 (lower is better)
Translates to: TCENWVHPSSVNRNPFPIISRNV*GMSQVY
Trigger: ATAAACCTGGCTCATGCCCAACACATTTCTGCTAAT...AATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCAGTTCTCACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp ACTTTTAAACTGATTTTCTTCAACCCTAAGAGTGAAGGGTATCTAGTCTCTGGACTCGGCCAGCGTTGGTaGGCCAGTCAGGATGCGAAT +
Preference number: 5 (lower is better)
Translates to: TFKLIFFNPKSEGYLVSGLGQRW*ASQDAN
Trigger: ATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAG...TCCAGAGACTAGATACCCTTCACTCTTAGGGTTGAAGAAAATCAGTTTAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACATGTTGTCATCCCGCTaGAGGACTAGATGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: VLALLVFACLKDSISGQYMLSSR*RTRWKV
Trigger: GACTTTCCATCTAGTCCTCAAGCGGGATGACAACAT...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp TGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTTTCTCCAGCCTGTTTaGAGCCTCAATCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: CLPCLSLLVLRTLFQANTFLQPV*SLNLSH
Trigger: GTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAA...AGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAAATTTCAGGCCAATACTaGATCCTCAGACAAACTGGG +
Preference number: 5 (lower is better)
Translates to: DVLALLVFACLKDSISGQISGQY*ILRQTG
Trigger: CCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAAT...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp TTCCAGGTCCTGAGGCTTGACTCTTCTAAGGCTCAAAATGGGTTCTGTTTCCAGAGCCAGGTTTATGATTaGGATTGTGTCCTGCACATA +
Preference number: 5 (lower is better)
Translates to: FQVLRLDSSKAQNGFCFQSQVYD*DCVLHI
Trigger: TATGTGCAGGACACAATCCAAATCATAAACCTGGCT...CTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACCCATGTGAGGGATGTTaGGATGCTCGCTTTGAATCT +
Preference number: 5 (lower is better)
Translates to: VLALLVFACLKDSISGQYPCEGC*DARFES
Trigger: AGATTCAAAGCGAGCATCCAAACATCCCTCACATGG...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCCCAGTTTGTAGGGTGTaGCACTGGCTTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALLVFACLKDSISGQYLIPVCRV*HWLFFL
Trigger: GAGGAAGAAAAGCCAGTGCAACACCCTACAAACTGG...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CAA 90 bp TACAAAGTAGAGGGTAGCATAGTGCCGGTAGATCAGTTTGTAGTCAGAGCCACCTCGAACAATCTGCTGTaGAATTTCTTCTGGTCACGA +
Preference number: 5 (lower is better)
Translates to: YKVEGSIVPVDQFVVRATSNNLL*NFFWSR
Trigger: TCGTGACCAGAAGAAATTCAACAGCAGATTGTTCGA...GGTGGCTCTGACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557999.5
CDS TCA 90 bp CTTGAGGATGCCTGCAGAAATCTAAGTAAATACCTGAGAGAACACTaGCAGATAAAGTCACAAACCAACACAGGGAGGCTGGTAGGGAAA +
Preference number: 5 (lower is better)
Translates to: LEDACRNLSKYLREH*QIKSQTNTGRLVGK
Trigger: TTTCCCTACCAGCCTCCCTGTGTTGGTTTGTGACTTTATCTGTCAGTGTTCTCTCAGGTATTTACTTAGATTTCTGCAGGCATCCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560771.5
CDS-3UTR CAA 90 bp CCTGGAGGATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACAATGTTGTCATCCCGCTaGAGGACTAGATGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: PGGCSAPYPYGRSNPIHTMLSSR*RTRWKV
Trigger: GACTTTCCATCTAGTCCTCAAGCGGGATGACAACAT...TGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATCCTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGAGATCGCCAATGTaGATGTTCCGAGGAATCTCT +
Preference number: 5 (lower is better)
Translates to: VLALLVFACLKDSISGQYLRSPM*MFRGIS
Trigger: AGAGATTCCTCGGAACATCAACATTGGCGATCTCAA...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATTGGGAACTTTGATGTaGAGATCGCCAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: DVLALLVFACLKDSISGQLGTLM*RSPMLM
Trigger: CATCAACATTGGCGATCTCAACATCAAAGTTCCCAA...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp TGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTGACAGGTTGGGAACTTaGATGTTGAGATCGCCAATG +
Preference number: 5 (lower is better)
Translates to: CLPCLSLLVLRTLFQANTDRLGT*MLRSPM
Trigger: CATTGGCGATCTCAACATCAAAGTTCCCAACCTGTC...AGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp CTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGTGTTTCCAGACGTGCTaGCCTTGCTTGTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LALLVFACLKDSISGQYLCFQTC*PCLSLL
Trigger: AAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACA...CAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp TGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGTTTCCAGACGTGCTaGCCTTGCTTGTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: CLPCLSLLVLRTLFQANTCFQTC*PCLSLL
Trigger: AAGCAAAGACAAGCAAGGCAAGCACGTCTGGAAACA...AGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACGACACAGACGACTCTTaGGCTCTTATACTCTATGAC +
Preference number: 5 (lower is better)
Translates to: VLALLVFACLKDSISGQYDTDDS*ALILYD
Trigger: GTCATAGAGTATAAGAGCCAAAGAGTCGTCTGTGTC...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp GTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACCGGAGTGGGAGTCTTTaGCTGAACAGACTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: VLALLVFACLKDSISGQYRSGSL*LNRLLF
Trigger: AAACAAAAGTCTGTTCAGCAAAAGACTCCCACTCCG...GTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp TTGCACTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACGCCCTGCTGGTGCTTTaGTGCTTCCTTCTAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LHLSIWKIKSNSHTFSKHALLVL*CFLLEA
Trigger: GGCCTCTAGAAGGAAGCACAAAAGCACCAGCAGGGC...GTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR CAA 90 bp TGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCCGTGGCTTCCCATGGTaGTTGAAAACCAGAATCGCC +
Preference number: 5 (lower is better)
Translates to: WKIKSNSHTFSKHLSRVSRGFPW*LKTRIA
Trigger: GGCGATTCTGGTTTTCAACAACCATGGGAAGCCACG...GGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
ENST00000560251.1
CDS-3UTR CAA 90 bp TGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACCGTGGCTTCCCATGGTaGTTGAAAACCAGAATCGCC +
Preference number: 5 (lower is better)
Translates to: CTLSIWKIKSNSHTFSKHRGFPW*LKTRIA
Trigger: GGCGATTCTGGTTTTCAACAACCATGGGAAGCCACG...GTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp CCAGGAATTGCACTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCCGTGGCTTCCCATGGTaGTTGAAAACCAGAATCGCC +
Preference number: 5 (lower is better)
Translates to: PGIALIHMEDQIQFTHIFRGFPW*LKTRIA
Trigger: GGCGATTCTGGTTTTCAACAACCATGGGAAGCCACG...GAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR CAA 90 bp TGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: CLPCLSLLVLRTLFQANTKKLQM*SSRLRT
Trigger: AGTCCTCAAGCGGGATGACAACATCTGTAACTTCTT...AGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp ACCCACTCTCAGGAAGACATCCCTAACACAAATCCAGGGACTTTGTTTCTTAACTTGGGAACTTTGATGTaGAGATCGCCAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: THSQEDIPNTNPGTLFLNLGTLM*RSPMLM
Trigger: CATCAACATTGGCGATCTCAACATCAAAGTTCCCAA...GTTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp ATGTTGAGATCGCCAATGTTGATGTTCCGAGGAATCTCTGGCAGGTTGATGTTTTTGGGAACTTTGATGTaGAGATCGCCAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: MLRSPMLMFRGISGRLMFLGTLM*RSPMLM
Trigger: CATCAACATTGGCGATCTCAACATCAAAGTTCCCAA...AAACATCAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CAA 90 bp GCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTGATCACAAACTGGGACAGGTaGGGAACTTTGATGTTGAGA +
Preference number: 5 (lower is better)
Translates to: ALLVFACLKDSISGQYLITNWDR*GTLMLR
Trigger: TCTCAACATCAAAGTTCCCAACCTGTCCCAGTTTGT...GATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp GACGTGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAAGTTTCCACAAAAACCTaGGGAGCTATGAAGAAAACA +
Preference number: 5 (lower is better)
Translates to: DVLALLVFACLKDSISGQVSTKT*GAMKKT
Trigger: TGTTTTCTTCATAGCTCCCAAGGTTTTTGTGGAAAC...TTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558011.5
CDS-3UTR CAA 90 bp GATGTAGTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCTTTCTCCAGCCTGTTTaGAGCCTCAATCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: DVVHLIHMEDQIQFTHIFFLQPV*SLNLSH
Trigger: GTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAA...GAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCACTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp TGCTTGCCTTGCTTGTCTTTGCTTGTCTTAAGGACTCTATTTCAGGCCAATACTTTGCCTTGCTTGTCTTaGCTTGTCTTAAGGACTCTA +
Preference number: 5 (lower is better)
Translates to: CLPCLSLLVLRTLFQANTLPCLS*LVLRTL
Trigger: TAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAA...AGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAAGACAAGCAAGGCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000558011.5
CDS-3UTR CAA 90 bp GAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCACCCAGTTTGTAGGGTGTaGCACTGGCTTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: EDQIQFTHIFETLIQSFHPVCRV*HWLFFL
Trigger: GAGGAAGAAAAGCCAGTGCAACACCCTACAAACTGG...GTGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423566.6
ENST00000558999.5
ENST00000560251.1
CDS-3UTR CAA 90 bp GACCCAGGAATTGCACTTATCCATATGGAAGATCAAATCCAATTCACACACATTAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: DPGIALIHMEDQIQFTHIKKLQM*SSRLRT
Trigger: AGTCCTCAAGCGGGATGACAACATCTGTAACTTCTT...AATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCCTGGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR CAA 90 bp ATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCTTTCTCCAGCCTGTTTaGAGCCTCAATCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: MEDQIQFTHIFETLIQSFFLQPV*SLNLSH
Trigger: GTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAA...GAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp TGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCGACAGGTTGGGAACTTaGATGTTGAGATCGCCAATG +
Preference number: 5 (lower is better)
Translates to: WKIKSNSHTFSKHLSRVSDRLGT*MLRSPM
Trigger: CATTGGCGATCTCAACATCAAAGTTCCCAACCTGTC...GGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CAA 90 bp ATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGCCAGTTTGTAGGGTGTaGCACTGGCTTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: IHMEDQIQFTHIFETLIQPVCRV*HWLFFL
Trigger: GAGGAAGAAAAGCCAGTGCAACACCCTACAAACTGG...CTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423566.6
ENST00000558999.5
ENST00000560251.1
CDS-3UTR CAA 90 bp GGAATTGCACTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAATGTTGTCATCCCGCTaGAGGACTAGATGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: GIALIHMEDQIQFTHIFEMLSSR*RTRWKV
Trigger: GACTTTCCATCTAGTCCTCAAGCGGGATGACAACAT...TTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGTGCAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560251.1
CDS-3UTR CAA 90 bp GGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGAGTTTCCAAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: GRSNPIHTHFRNTYPEFPKKLQM*SSRLRT
Trigger: AGTCCTCAAGCGGGATGACAACATCTGTAACTTCTT...TGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
ENST00000560251.1
CDS-3UTR CAA 90 bp GTGCACCTTATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACAAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: VHLIHMEDQIQFTHIFETKKLQM*SSRLRT
Trigger: AGTCCTCAAGCGGGATGACAACATCTGTAACTTCTT...TGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGATAAGGTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423566.6
ENST00000557999.5
ENST00000558806.5
ENST00000558999.5
CDS-3UTR CAA 90 bp CCTCTAAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCATTGAGATCGCCAATGTaGATGTTCCGAGGAATCTCT +
Preference number: 5 (lower is better)
Translates to: PLNIPYITKLLTAVSTNSLRSPM*MFRGIS
Trigger: AGAGATTCCTCGGAACATCAACATTGGCGATCTCAA...TGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTTAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS-3UTR CAA 90 bp ATCCATATGGAAGATCAAATCCAATTCACACACATTTTCGAAACACTTATCCAGACGTGCTTGCCTTGCTaGTCTTTGCTTGTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: IHMEDQIQFTHIFETLIQTCLPC*SLLVLR
Trigger: CCTTAAGACAAGCAAAGACAAGCAAGGCAAGCACGT...CTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGATCTTCCATATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423566.6
CDS-3UTR CAA 90 bp AGTGAAGGGTATCTAGTCTCTGGAAAGTCCCAGCCAACACTGAAGCAAAATAATAAAGGGTTTATTAACTaGTCAACAGACGCAAGAGTA +
Preference number: 5 (lower is better)
Translates to: SEGYLVSGKSQPTLKQNNKGFIN*STDARV
Trigger: TACTCTTGCGTCTGTTGACAAGTTAATAAACCCTTT...ATTATTTTGCTTCAGTGTTGGCTGGGACTTTCCAGAGACTAGATACCCTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS-3UTR CAA 90 bp AAATATTCCATATATCACAAAGTTACTGACTGCGGTCTCCACAAATTCAGGCTGATGACATCAGGGGTTTaGATATCTATTCACCTACAC +
Preference number: 5 (lower is better)
Translates to: KYSIYHKVTDCGLHKFRLMTSGV*ISIHLH
Trigger: GTGTAGGTGAATAGATATCAAAACCCCTGATGTCAT...CAGCCTGAATTTGTGGAGACCGCAGTCAGTAACTTTGTGATATATGGAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336418.9
CDS CAA 90 bp GCGCTCACGAGCCCTAGCACCCAAGGGTCCGGCCTCTCTGACGCCTaGGAGGGCAGGTGCGGATGCCGAGGAGAGTGGTCACCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: ALTSPSTQGSGLSDA*EGRCGCRGEWSPRP
Trigger: TGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGCCCTCCAAGGCGTCAGAGAGGCCGGACCCTTGGGTGCTAGGGCTCGTGAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 72 bp TGCTCGGTGCAGGAGCCCCAGGTGACCAAAGAGCGGTaGCCCCGGGCGCCGAGAGGCCAAAGAGGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: CSVQEPQVTKER*PRAPRGQRGGK
Trigger: CTTCCCTCCTCTTTGGCCTCTCGGCGCCCGGGGGCACCGCTCTTTGGTCACCTGGGGCTCCTGCACCGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 72 bp CCGGTTGGTGCGCTGCTGAGAGCGGCACTCGGAAACTaGGCCCCGGCGCTCACGAGCCCTAGCACCCAAGGG +
Preference number: 6 (lower is better)
Translates to: PVGALLRAALGN*APALTSPSTQG
Trigger: CCCTTGGGTGCTAGGGCTCGTGAGCGCCGGGGCCAAGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 90 bp CGATCACTTCCGGTTGGTGCGCTGCTGAGAGCGGCACTCGGAAACTaGGCCCCGGCGCTCACGAGCCCTAGCACCCAAGGGTCCGGCCTC +
Preference number: 6 (lower is better)
Translates to: RSLPVGALLRAALGN*APALTSPSTQGSGL
Trigger: GAGGCCGGACCCTTGGGTGCTAGGGCTCGTGAGCGCCGGGGCCAAGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCGGAAGTGATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 72 bp TCCGGCCTCTCTGACGCCTTGGAGGGCAGGTGCGGATaGCGAGGAGAGTGGTCACCTCGGCCAGCGTTGGTT +
Preference number: 6 (lower is better)
Translates to: SGLSDALEGRCG*RGEWSPRPALV
Trigger: AACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGCCCTCCAAGGCGTCAGAGAGGCCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 72 bp GACGCCTTGGAGGGCAGGTGCGGATGCCGAGGAGAGTaGTCACCTCGGCCAGCGTTGGTTGGCCAGTCAGGA +
Preference number: 6 (lower is better)
Translates to: DALEGRCGCRGE*SPRPALVGQSG
Trigger: TCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGCCCTCCAAGGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 72 bp AGCCCTAGCACCCAAGGGTCCGGCCTCTCTGACGCCTaGGAGGGCAGGTGCGGATGCCGAGGAGAGTGGTCA +
Preference number: 6 (lower is better)
Translates to: SPSTQGSGLSDA*EGRCGCRGEWS
Trigger: TGACCACTCTCCTCGGCATCCGCACCTGCCCTCCAAGGCGTCAGAGAGGCCGGACCCTTGGGTGCTAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS TCA 72 bp CCGCCACAACACGATCACTTCCGGTTGGTGCGCTGCTaGGAGCGGCACTCGGAAACTTGGCCCCGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: PPQHDHFRLVRC*ERHSETWPRRS
Trigger: TGAGCGCCGGGGCCAAGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCGGAAGTGATCGTGTTGTGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 72 bp GAATCCGGATCTATGTCCCTCGCCCAGACCGACGGCTaGCCCCAGAAGCCGAAACGACCGTCAGCCGGGTTG +
Preference number: 6 (lower is better)
Translates to: ESGSMSLAQTDG*PQKPKRPSAGL
Trigger: CAACCCGGCTGACGGTCGTTTCGGCTTCTGGGGCCAGCCGTCGGTCTGGGCGAGGGACATAGATCCGGATTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 90 bp GAGGGCAGGTGCGGATGCCGAGGAGAGTGGTCACCTCGGCCAGCGTaGGTTGGCCAGTCAGGATGCGAATCCGGATCTATGTCCCTCGCC +
Preference number: 6 (lower is better)
Translates to: EGRCGCRGEWSPRPA*VGQSGCESGSMSLA
Trigger: GGCGAGGGACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 72 bp GCCATCCCCTTAGCGCTCGCAGAACGTTCCGCGGAGTaGAGACGCCGGTCATTCGGCCGTTCGTCGGTTATG +
Preference number: 6 (lower is better)
Translates to: AIPLALAERSAE*RRRSFGRSSVM
Trigger: CATAACCGACGAACGGCCGAATGACCGGCGTCTCCACTCCGCGGAACGTTCTGCGAGCGCTAAGGGGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 90 bp GCAGGTGCGGATGCCGAGGAGAGTGGTCACCTCGGCCAGCGTTGGTaGGCCAGTCAGGATGCGAATCCGGATCTATGTCCCTCGCCCAGA +
Preference number: 6 (lower is better)
Translates to: AGADAEESGHLGQRW*ASQDANPDLCPSPR
Trigger: TCTGGGCGAGGGACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 90 bp AAACGACCGTCAGCCGGGTTGCCAAAACGGAGAGGCGGCGGGAGCTaGCTTTTCTCACCGCCCGCTCCAAATCATGCACTCCCGCCATCC +
Preference number: 6 (lower is better)
Translates to: KRPSAGLPKRRGGGS*LFSPPAPNHALPPS
Trigger: GGATGGCGGGAGTGCATGATTTGGAGCGGGCGGTGAGAAAAGCAAGCTCCCGCCGCCTCTCCGTTTTGGCAACCCGGCTGACGGTCGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 72 bp TGGTCACCTCGGCCAGCGTTGGTTGGCCAGTCAGGATaGGAATCCGGATCTATGTCCCTCGCCCAGACCGAC +
Preference number: 6 (lower is better)
Translates to: WSPRPALVGQSG*ESGSMSLAQTD
Trigger: GTCGGTCTGGGCGAGGGACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS GCA 72 bp TCCTCCTTCCGCCACAACACGATCACTTCCGGTTGGTaGGCTGCTGAGAGCGGCACTCGGAAACTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: SSFRHNTITSGW*AAESGTRKLGP
Trigger: GGGGCCAAGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCGGAAGTGATCGTGTTGTGGCGGAAGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 72 bp GCGGATGCCGAGGAGAGTGGTCACCTCGGCCAGCGTTaGTTGGCCAGTCAGGATGCGAATCCGGATCTATGT +
Preference number: 6 (lower is better)
Translates to: ADAEESGHLGQR*LASQDANPDLC
Trigger: ACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 72 bp AGCTCCTCCTTCCGCCACAACACGATCACTTCCGGTTaGTGCGCTGCTGAGAGCGGCACTCGGAAACTTGGC +
Preference number: 6 (lower is better)
Translates to: SSSFRHNTITSG*CAAESGTRKLG
Trigger: GCCAAGTTTCCGAGTGCCGCTCTCAGCAGCGCACCAACCGGAAGTGATCGTGTTGTGGCGGAAGGAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 72 bp TCAGCCGGGTTGCCAAAACGGAGAGGCGGCGGGAGCTaGCTTTTCTCACCGCCCGCTCCAAATCATGCACTC +
Preference number: 6 (lower is better)
Translates to: SAGLPKRRGGGS*LFSPPAPNHAL
Trigger: GAGTGCATGATTTGGAGCGGGCGGTGAGAAAAGCAAGCTCCCGCCGCCTCTCCGTTTTGGCAACCCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 72 bp GATGCCGAGGAGAGTGGTCACCTCGGCCAGCGTTGGTaGGCCAGTCAGGATGCGAATCCGGATCTATGTCCC +
Preference number: 6 (lower is better)
Translates to: DAEESGHLGQRW*ASQDANPDLCP
Trigger: GGGACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 72 bp TGCGGATGCCGAGGAGAGTGGTCACCTCGGCCAGCGTaGGTTGGCCAGTCAGGATGCGAATCCGGATCTATG +
Preference number: 6 (lower is better)
Translates to: CGCRGEWSPRPA*VGQSGCESGSM
Trigger: CATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCATCCGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CCA 72 bp ATGCCGAGGAGAGTGGTCACCTCGGCCAGCGTTGGTTaGCCAGTCAGGATGCGAATCCGGATCTATGTCCCT +
Preference number: 6 (lower is better)
Translates to: MPRRVVTSASVG*PVRMRIRIYVP
Trigger: AGGGACATAGATCCGGATTCGCATCCTGACTGGCCAACCAACGCTGGCCGAGGTGACCACTCTCCTCGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 72 bp CCTGGAGGATGTAGTGCACCTTGTGATCCGCCTGCCTaGGCCTCCCAGGCTGATAGCTTTTTCTACTCCTTC +
Preference number: 6 (lower is better)
Translates to: PGGCSAPCDPPA*ASQADSFFYSF
Trigger: GAAGGAGTAGAAAAAGCTATCAGCCTGGGAGGCCAAGGCAGGCGGATCACAAGGTGCACTACATCCTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561410.5
CDS TCA 72 bp GGTAGAAGCGGACTAGCCGTGGCTTCCCATGGTTGTTaGAAACCAGAATCGCCTGAATCATCTTTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: GRSGLAVASHGC*KPESPESSLPA
Trigger: GGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAACCATGGGAAGCCACGGCTAGTCCGCTTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000557999.5
ENST00000558011.5
ENST00000558806.5
ENST00000558999.5
ENST00000560184.5
ENST00000560251.1
ENST00000560940.5
ENST00000617003.1
CDS GCA 72 bp ATGGTTGTTGAAAACCAGAATCGCCTGAATCATCTTTaGCAGCCACGGTTCTCTCAGCACCGGCTACTCCCA +
Preference number: 6 (lower is better)
Translates to: MVVENQNRLNHL*QPRFSQHRLLP
Trigger: TGGGAGTAGCCGGTGCTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336418.9
ENST00000557999.5
ENST00000558011.5
ENST00000558806.5
ENST00000558999.5
ENST00000617003.1
CDS GCA 72 bp CCACCTCCTGGAGGATGTAGTGCACCTCTTTCCCAGTaGAGGATTCTGTTCTTTGGCTCCTGCAACAGTATA +
Preference number: 6 (lower is better)
Translates to: PPPGGCSAPLSQ*RILFFGSCNSI
Trigger: TATACTGTTGCAGGAGCCAAAGAACAGAATCCTGCACTGGGAAAGAGGTGCACTACATCCTCCAGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558186.1
CDS TCA 72 bp GCTATTAATGAGCCAAAGGGTAACGACGCTCTGAGGTaGCTCAGCACTGACGGGAAGAGAAAATCATCTGAG +
Preference number: 6 (lower is better)
Translates to: AINEPKGNDALR*LSTDGKRKSSE
Trigger: CTCAGATGATTTTCTCTTCCCGTCAGTGCTGAGTCACCTCAGAGCGTCGTTACCCTTTGGCTCATTAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561410.5
CDS TCA 72 bp TGGTGGCTATTAATGAGCCAAAGGGTAACGACGCTCTaGGGTGACTCAGCACTGACGGGAAGAGAAAATCAT +
Preference number: 6 (lower is better)
Translates to: WWLLMSQRVTTL*GDSALTGRENH
Trigger: ATGATTTTCTCTTCCCGTCAGTGCTGAGTCACCTCAGAGCGTCGTTACCCTTTGGCTCATTAATAGCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561410.5
CDS TCA 72 bp TTTGGCTCCTGCAACAGTATAGATCCTTCACTCTGGTaGCAGATCCTTCGCCTCCATGAAGAGAGCTCACTA +
Preference number: 6 (lower is better)
Translates to: FGSCNSIDPSLW*QILRLHEESSL
Trigger: TAGTGAGCTCTCTTCATGGAGGCGAAGGATCTGTCACCAGAGTGAAGGATCTATACTGTTGCAGGAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558186.1
CDS CAA 72 bp CCACCCTCCAAGAAGTTACAGATGTTGTCATCCCGCTaGAGGACTAGATGGAAAGTCTCTCGAACAATCTGC +
Preference number: 6 (lower is better)
Translates to: PPSKKLQMLSSR*RTRWKVSRTIC
Trigger: GCAGATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000557999.5
ENST00000558011.5
ENST00000558806.5
ENST00000558999.5
ENST00000559601.2
ENST00000560184.5
ENST00000560251.1
ENST00000560940.5
CDS CAA 90 bp TCAGAGCCACCAATCAAACTTCCACCCTCCAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACTAGATGGAAAGTCTCTCGAACAATC +
Preference number: 6 (lower is better)
Translates to: SEPPIKLPPSKKLQM*SSRLRTRWKVSRTI
Trigger: GATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGTTTGATTGGTGGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000557999.5
ENST00000558011.5
ENST00000558806.5
ENST00000558999.5
ENST00000559601.2
ENST00000560184.5
ENST00000560251.1
ENST00000560940.5
CDS CAA 90 bp ATGGCTAACATTTCTCTGATTGGAGATAGATGGGACTTAAGAAAGTaGGAGGCTGCCAAGCATGGGTGTGGGAGCAAGCAGTCAAGAATC +
Preference number: 6 (lower is better)
Translates to: MANISLIGDRWDLRK*EAAKHGCGSKQSRI
Trigger: GATTCTTGACTGCTTGCTCCCACACCCATGCTTGGCAGCCTCCAACTTTCTTAAGTCCCATCTATCTCCAATCAGAGAAATGTTAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560771.5
CDS CCA 72 bp TTTGTTTGTTCTTTTAATGACCCAGTGTGGGTGAAGTaGAGCATGTCCGTATACTGCAGATGGAGCAGCGGA +
Preference number: 6 (lower is better)
Translates to: FVCSFNDPVWVK*SMSVYCRWSSG
Trigger: TCCGCTGCTCCATCTGCAGTATACGGACATGCTCCACTTCACCCACACTGGGTCATTAAAAGAACAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 72 bp GAGCTCACTACTGTTTCCAAGCTGCTCAGTGGGCTGTaGAGCAGCAACAACTGTCAGAGAGTTTTTAACTGT +
Preference number: 6 (lower is better)
Translates to: ELTTVSKLLSGL*SSNNCQRVFNC
Trigger: ACAGTTAAAAACTCTCTGACAGTTGTTGCTGCTCAACAGCCCACTGAGCAGCTTGGAAACAGTAGTGAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558186.1
CDS TCA 72 bp CCTTTAAAGTGCTTCAGCCTCCTTCCAGGATTGCAGTaGGGACTGGATGAGATAAATGTGTGTAAAGCACCT +
Preference number: 6 (lower is better)
Translates to: PLKCFSLLPGLQ*GLDEINVCKAP
Trigger: AGGTGCTTTACACACATTTATCTCATCCAGTCCTCACTGCAATCCTGGAAGGAGGCTGAAGCACTTTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560771.5
CDS CAA 72 bp CCAATCAAACTTCCACCCTCCAAGAAGTTACAGATGTaGTCATCCCGCTTGAGGACTAGATGGAAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: PIKLPPSKKLQM*SSRLRTRWKVS
Trigger: AGAGACTTTCCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGTTTGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336418.9
ENST00000423566.6
ENST00000557999.5
ENST00000558011.5
ENST00000558806.5
ENST00000558999.5
ENST00000559601.2
ENST00000560184.5
ENST00000560251.1
ENST00000560940.5
CDS CAA 72 bp GCACTGACGGGAAGAGAAAATCATCTGAGAGTCATCTaGGCCCAGAGTCAGACTCTAGTTCCCATATTATAC +
Preference number: 6 (lower is better)
Translates to: ALTGRENHLRVI*AQSQTLVPILY
Trigger: GTATAATATGGGAACTAGAGTCTGACTCTGGGCCAAGATGACTCTCAGATGATTTTCTCTTCCCGTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561410.5
CDS TCA 72 bp GCCTGCAGAAATCTAAGTAAATACCTGAGAGAACACTaGCAGATAAAGTCACAAACCAACACAGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: ACRNLSKYLREH*QIKSQTNTGRL
Trigger: CAGCCTCCCTGTGTTGGTTTGTGACTTTATCTGTCAGTGTTCTCTCAGGTATTTACTTAGATTTCTGCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560771.5
CDS CAA 90 bp GGTGACTCAGCACTGACGGGAAGAGAAAATCATCTGAGAGTCATCTaGGCCCAGAGTCAGACTCTAGTTCCCATATTATACATTTTAGAA +
Preference number: 6 (lower is better)
Translates to: GDSALTGRENHLRVI*AQSQTLVPILYILE
Trigger: TTCTAAAATGTATAATATGGGAACTAGAGTCTGACTCTGGGCCAAGATGACTCTCAGATGATTTTCTCTTCCCGTCAGTGCTGAGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561410.5
CDS TCA 72 bp TTATTTTTGTTTGTTCTTTTAATGACCCAGTGTGGGTaGAGTGGAGCATGTCCGTATACTGCAGATGGAGCA +
Preference number: 6 (lower is better)
Translates to: LFLFVLLMTQCG*SGACPYTADGA
Trigger: TGCTCCATCTGCAGTATACGGACATGCTCCACTTCACCCACACTGGGTCATTAAAAGAACAAACAAAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617003.1
CDS CAA 72 bp AAGAGATTGTTGAGAGATGGGAAATGCATCATTTTCTaGTCTATACTTGGGGGCATGGTGGCTATTAATGAG +
Preference number: 6 (lower is better)
Translates to: KRLLRDGKCIIF*SILGGMVAINE
Trigger: CTCATTAATAGCCACCATGCCCCCAAGTATAGACAAGAAAATGATGCATTTCCCATCTCTCAACAATCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561410.5