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Pregenerated sensors for AP3S1 (Homo sapiens)

Ensembl gene IDs: ENSG00000177879

Ensembl transcript IDs: ENST00000514118.5, ENST00000515066.6

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GTTGCGTTACTAACGTTCAGAGGTCTGCGACAGCTTCGATTTGAATaGCTAGCCGGGAACACCAAGTTTCACTGTGTAATTGCGTCCCCC +
Preference number: 5 (lower is better)
Translates to: VALLTFRGLRQLRFE*LAGNTKFHCVIASP
Trigger: GGGGGACGCAATTACACAGTGAAACTTGGTGTTCCCGGCTAGTCATTCAAATCGAAGCTGTCGCAGACCTCTGAACGTTAGTAACGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514118.5
CDS TCA 90 bp ACATGTTGCGTTACTAACGTTCAGAGGTCTGCGACAGCTTCGATTTaGATGACTAGCCGGGAACACCAAGTTTCACTGTGTAATTGCGTC +
Preference number: 5 (lower is better)
Translates to: TCCVTNVQRSATASI*MTSREHQVSLCNCV
Trigger: GACGCAATTACACAGTGAAACTTGGTGTTCCCGGCTAGTCATTCAAATCGAAGCTGTCGCAGACCTCTGAACGTTAGTAACGCAACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514118.5
CDS TCA 90 bp TTAGGCAATAAGATTTGGAATTGTGCTTATTACCCAAGGCAGCTATaGCTGTGGCTAAAAGAAGAATACACAAAGCTGTTGGGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: LGNKIWNCAYYPRQL*LWLKEEYTKLLGRE
Trigger: TTCTCTACCCAACAGCTTTGTGTATTCTTCTTTTAGCCACAGTCATAGCTGCCTTGGGTAATAAGCACAATTCCAAATCTTATTGCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515066.6
CDS GCA 72 bp CTGTGTAATTGCGTCCCCCTACTCCGGCGCCTCCTTTaGGACGCTCCCTGGAGAAAAGCACGCCCACTGCAC +
Preference number: 6 (lower is better)
Translates to: LCNCVPLLRRLL*DAPWRKARPLH
Trigger: GTGCAGTGGGCGTGCTTTTCTCCAGGGAGCGTCGCAAAGGAGGCGCCGGAGTAGGGGGACGCAATTACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514118.5
CDS GCA 72 bp ATGACTAGCCGGGAACACCAAGTTTCACTGTGTAATTaGGTCCCCCTACTCCGGCGCCTCCTTTGCGACGCT +
Preference number: 6 (lower is better)
Translates to: MTSREHQVSLCN*VPLLRRLLCDA
Trigger: AGCGTCGCAAAGGAGGCGCCGGAGTAGGGGGACGCAATTACACAGTGAAACTTGGTGTTCCCGGCTAGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514118.5
CDS TCA 72 bp GTTACTAACGTTCAGAGGTCTGCGACAGCTTCGATTTaGATGACTAGCCGGGAACACCAAGTTTCACTGTGT +
Preference number: 6 (lower is better)
Translates to: VTNVQRSATASI*MTSREHQVSLC
Trigger: ACACAGTGAAACTTGGTGTTCCCGGCTAGTCATTCAAATCGAAGCTGTCGCAGACCTCTGAACGTTAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514118.5
CDS TCA 72 bp CTAACGTTCAGAGGTCTGCGACAGCTTCGATTTGAATaGCTAGCCGGGAACACCAAGTTTCACTGTGTAATT +
Preference number: 6 (lower is better)
Translates to: LTFRGLRQLRFE*LAGNTKFHCVI
Trigger: AATTACACAGTGAAACTTGGTGTTCCCGGCTAGTCATTCAAATCGAAGCTGTCGCAGACCTCTGAACGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514118.5
CDS GCA 72 bp GCCCCATATCTGGGCAAGCTGTTAAGAAGGTCTGGATaGTCCTTCCTTTACACTTGTCTACATGGAAAATCA +
Preference number: 6 (lower is better)
Translates to: APYLGKLLRRSG*SFLYTCLHGKS
Trigger: TGATTTTCCATGTAGACAAGTGTAAAGGAAGGAGCATCCAGACCTTCTTAACAGCTTGCCCAGATATGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515066.6
CDS CCA 72 bp TTCTGCCCCATATCTGGGCAAGCTGTTAAGAAGGTCTaGATGCTCCTTCCTTTACACTTGTCTACATGGAAA +
Preference number: 6 (lower is better)
Translates to: FCPISGQAVKKV*MLLPLHLSTWK
Trigger: TTTCCATGTAGACAAGTGTAAAGGAAGGAGCATCCAGACCTTCTTAACAGCTTGCCCAGATATGGGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515066.6
CDS TCA 72 bp GCTACAGCACCTGCTACTGATATTCAGACTAGTGCTTaGGGGAAGAGTCACTACAATTCTGAAGTAGGGTTT +
Preference number: 6 (lower is better)
Translates to: ATAPATDIQTSA*GKSHYNSEVGF
Trigger: AAACCCTACTTCAGAATTGTAGTGACTCTTCCCTCAAGCACTAGTCTGAATATCAGTAGCAGGTGCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515066.6
CDS TCA 72 bp AAGATTTGGAATTGTGCTTATTACCCAAGGCAGCTATaGCTGTGGCTAAAAGAAGAATACACAAAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: KIWNCAYYPRQL*LWLKEEYTKLL
Trigger: CAACAGCTTTGTGTATTCTTCTTTTAGCCACAGTCATAGCTGCCTTGGGTAATAAGCACAATTCCAAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515066.6