RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP3M2 (Homo sapiens)

Ensembl gene IDs: ENSG00000070718

Ensembl transcript IDs: ENST00000174653.3, ENST00000396926.8, ENST00000517499.5, ENST00000517865.5, ENST00000517922.5, ENST00000517969.1, ENST00000518421.5, ENST00000520689.1, ENST00000521235.1, ENST00000521280.5, ENST00000521899.1, ENST00000522320.1, ENST00000522606.5, ENST00000523249.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCGATGGAGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATaGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGT +
Preference number: 1 (lower is better)
Translates to: ARWRHPALLMVMLQE*RQRCPLHSMACCTC
Trigger: ACATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCTCCATCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 90 bp CACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATaGCCGCTACACTCCATGGCCTGCTGCACATGTGACAGGACAGTT +
Preference number: 1 (lower is better)
Translates to: HPALLMVMLQEWRQR*PLHSMACCTCDRTV
Trigger: AACTGTCCTGTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR TCA 90 bp CATGGAACCAAACAGCTCGATGGAGACACCCTGCACTGCTTATGGTaGTGCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGG +
Preference number: 1 (lower is better)
Translates to: HGTKQLDGDTLHCLW*CCRNGGSDARYTPW
Trigger: CCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCTCCATCGAGCTGTTTGGTTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 90 bp CTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTaGACATGTGACAGGACAGTTATTTCATCTATGCTTACACCTGCA +
Preference number: 1 (lower is better)
Translates to: LQEWRQRCPLHSMAC*TCDRTVISSMLTPA
Trigger: TGCAGGTGTAAGCATAGATGAAATAACTGTCCTGTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 90 bp ATGCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTaGTGCACATGTGACAGGACAGTTATTTCATCTATGCTTACACCT +
Preference number: 1 (lower is better)
Translates to: MLQEWRQRCPLHSMA*CTCDRTVISSMLTP
Trigger: AGGTGTAAGCATAGATGAAATAACTGTCCTGTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 90 bp TCCAGCACTGACAAATGGAGATATGAGCTCACTCACTCACAGCTGTaGTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATG +
Preference number: 1 (lower is better)
Translates to: SSTDKWRYELTHSQL*SPSWEESALYSSTM
Trigger: CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGAGTGAGTGAGCTCATATCTCCATTTGTCAGTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 90 bp AAATGGAGATATGAGCTCACTCACTCACAGCTGTGCTCACCTTCATaGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCC +
Preference number: 1 (lower is better)
Translates to: KWRYELTHSQLCSPS*EESALYSSTMTHKP
Trigger: GGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGAGTGAGTGAGCTCATATCTCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 90 bp GGGCGACAGATGGAAAAGTTTCCGACCAACGGGAAGGTTACGATCTaGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCAC +
Preference number: 1 (lower is better)
Translates to: GRQMEKFPTNGKVTI*YQSSTDKWRYELTH
Trigger: GTGAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTCCATCTGTCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 90 bp CAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCATGGTaGATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTG +
Preference number: 1 (lower is better)
Translates to: QVLENPQAEMLPFPW*MCMSLQDKLRSHGV
Trigger: CACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACATCCACCATGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 90 bp GCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTCGATaGAGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGG +
Preference number: 1 (lower is better)
Translates to: ATSAHVKHTWNQTAR*RHPALLMVMLQEWR
Trigger: CCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCTCCATCGAGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 90 bp TGCTTCCCTTTCCATGGTGGATGTGTATGTCACTCCAGGACAAACTaGGGAGTCACGGAGTGTGGAACACATCTGGTTGTGTACAGTACA +
Preference number: 1 (lower is better)
Translates to: CFPFHGGCVCHSRTN*GVTECGTHLVVYST
Trigger: TGTACTGTACACAACCAGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACATCCACCATGGAAAGGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 90 bp TTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCATaGTGGATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGA +
Preference number: 1 (lower is better)
Translates to: FQVLENPQAEMLPFP*WMCMSLQDKLRSHG
Trigger: TCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACATCCACCATGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 90 bp GTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTaGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAAC +
Preference number: 1 (lower is better)
Translates to: VTPGQTAESRSVEHI*LCTVHYPRGKSQSN
Trigger: GTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCAGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 90 bp CGTAACAATCGACTCGCAGTGCCTTATCTTGTAAGAAGCCTCTCCTaGAATAAAGACGCCAGAGTACTGCGACACCGTTTCATGCCTTCA +
Preference number: 1 (lower is better)
Translates to: RNNRLAVPYLVRSLS*NKDARVLRHRFMPS
Trigger: TGAAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTTTATTCCAGGAGAGGCTTCTTACAAGATAAGGCACTGCGAGTCGATTGTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
3UTR CCA 90 bp TGGATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTaGAACACATCTGGTTGTGTACAGTACACTATCCCAGAGGAAAAT +
Preference number: 1 (lower is better)
Translates to: WMCMSLQDKLRSHGV*NTSGCVQYTIPEEN
Trigger: ATTTTCCTCTGGGATAGTGTACTGTACACAACCAGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 90 bp ACTCCATGGCCTGCTGCACATGTGACAGGACAGTTATTTCATCTATaGTTACACCTGCAGGTCCCTTACCCTAGAAACACTCTATATCTT +
Preference number: 1 (lower is better)
Translates to: TPWPAAHVTGQLFHL*LHLQVPYPRNTLYL
Trigger: AAGATATAGAGTGTTTCTAGGGTAAGGGACCTGCAGGTGTAAGCATAGATGAAATAACTGTCCTGTCACATGTGCAGCAGGCCATGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR TCA 90 bp AACTCACCTGAGGTTACCCAATTAGTAACCACAGAAGCTGGAATGTaGACCCAGGTAACTCTAGAGCCTGAGTTCTTAATCACCACAGAT +
Preference number: 1 (lower is better)
Translates to: NSPEVTQLVTTEAGM*TQVTLEPEFLITTD
Trigger: ATCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACCTCAGGTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
3UTR TCA 90 bp AGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGAGCCTaGGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACAT +
Preference number: 1 (lower is better)
Translates to: SNHRSWNVNPGNSRA*VLNHHRYGFHIHVH
Trigger: ATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
3UTR TCA 90 bp TATAAATATTTAAATAGTAACAGACACACTGAACTAGGACAAAAATaGCCCACTGGGAAAGAAAGCCTGAGGTATCCCTTTAGTTGCCAT +
Preference number: 1 (lower is better)
Translates to: YKYLNSNRHTELGQK*PTGKESLRYPFSCH
Trigger: ATGGCAACTAAAGGGATACCTCAGGCTTTCTTTCCCAGTGGGTCATTTTTGTCCTAGTTCAGTGTGTCTGTTACTATTTAAATATTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGCTGGGAAAGAAAGCCTaGGGTATCCCTTTAGTTGCC +
Preference number: 2 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMLGKKA*GIPLVA
Trigger: GGCAACTAAAGGGATACCTCAGGCTTTCTTTCCCAG...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGGTGCTTCCAAGTACTTaGGAATCCACAGGCAGAGAT +
Preference number: 2 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMVLPST*ESTGRD
Trigger: ATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCAC...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGGGGAAGGTTACGATCTaGTACCAGTCCAGCACTGAC +
Preference number: 2 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPGKVTI*YQSSTD
Trigger: GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR GCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGATCTATGCTTACACCTaGAGGTCCCTTACCCTAGAA +
Preference number: 2 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMIYAYT*RSLTLE
Trigger: TTCTAGGGTAAGGGACCTGCAGGTGTAAGCATAGAT...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGATGACACACAAACCCTaGCTGCACTGGGGATTATGG +
Preference number: 2 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPMTHKP*LHWGLW
Trigger: CCATAATCCCCAGTGCAGCCAGGGTTTGTGTGTCAT...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACCTGTGCTCACCTTCATaGGAAGAGTCGGCCCTCTAC +
Preference number: 2 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDLCSPS*EESALY
Trigger: GTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAG...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR GCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACCACACAAACCCTGGCTaGACTGGGGATTATGGGATC +
Preference number: 2 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDHTNPG*TGDYGI
Trigger: GATCCCATAATCCCCAGTGCAGCCAGGGTTTGTGTG...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATAAACCCTGGCTGCACTaGGGATTATGGGATCGGCTT +
Preference number: 2 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDKPWLH*GLWDRL
Trigger: AAGCCGATCCCATAATCCCCAGTGCAGCCAGGGTTT...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGTCTACTCCAGTACGATaGCACACAAACCCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQSTPVR*HTNPGC
Trigger: GCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGA...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCACTGGGAAAGAAAGCCTaGGGTATCCCTTTAGTTGCC +
Preference number: 2 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPLGKKA*GIPLVA
Trigger: GGCAACTAAAGGGATACCTCAGGCTTTCTTTCCCAG...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACAAGTCCGATACCATCATaGTCTTTGAGGGAAAATCTG +
Preference number: 2 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTSPIPS*SLRENL
Trigger: CAGATTTTCCCTCAAAGACCATGATGGTATCGGACT...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGAAACCCTGGCTGCACTaGGGATTATGGGATCGGCTT +
Preference number: 2 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQKPWLH*GLWDRL
Trigger: AAGCCGATCCCATAATCCCCAGTGCAGCCAGGGTTT...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CAA 90 bp ACCTTAGAATCCTGTAGGTTCCTCAGGAGAGGTGCTTCCAAGTACTaGAGAATCCACAGGCAGAGATGCTTCCCTTTCCATGGTGGATGT +
Preference number: 2 (lower is better)
Translates to: TLESCRFLRRGASKY*RIHRQRCFPFHGGC
Trigger: ACATCCACCATGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTCCTGAGGAACCTACAGGATTCTAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp CAGGTGTGGCGTAACAATCGACTCGCAGTGCCTTATCTTGTAAGAAGCCTCTCCAGTAGAACTTGTCCTTaGGAACTGGTGTTGCTGTGT +
Preference number: 2 (lower is better)
Translates to: QVWRNNRLAVPYLVRSLSSRTCP*ELVLLC
Trigger: ACACAGCAACACCAGTTCTCAAGGACAAGTTCTACT...GGAGAGGCTTCTTACAAGATAAGGCACTGCGAGTCGATTGTTACGCCACACCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
3UTR-3UTR TCA 90 bp GCCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGTTCTGTAAAAGGAAGTaGGTAGAACTTGTCCTTGAG +
Preference number: 2 (lower is better)
Translates to: AFMGRVGPLLQYDDTQTLFCKRK*VELVLE
Trigger: CTCAAGGACAAGTTCTACTCACTTCCTTTTACAGAA...CAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
3UTR-3UTR CCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGATGACACACAAACCCTaGCTGCACTGGGGATTATGG +
Preference number: 2 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQMTHKP*LHWGLW
Trigger: CCATAATCCCCAGTGCAGCCAGGGTTTGTGTGTCAT...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR GCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTCACACAAACCCTGGCTaGACTGGGGATTATGGGATC +
Preference number: 2 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTHTNPG*TGDYGI
Trigger: GATCCCATAATCCCCAGTGCAGCCAGGGTTTGTGTG...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATAGTCCGATACCATCATaGTCTTTGAGGGAAAATCTG +
Preference number: 2 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDSPIPS*SLRENL
Trigger: CAGATTTTCCCTCAAAGACCATGATGGTATCGGACT...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAGTCCGATACCATCATaGTCTTTGAGGGAAAATCTG +
Preference number: 2 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDSPIPS*SLRENL
Trigger: CAGATTTTCCCTCAAAGACCATGATGGTATCGGACT...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGGGGAAGGTTACGATCTaGTACCAGTCCAGCACTGAC +
Preference number: 2 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLGKVTI*YQSSTD
Trigger: GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGTCTACTCCAGTACGATaGCACACAAACCCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRSTPVR*HTNPGC
Trigger: GCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGA...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR GCA 90 bp ATGTTTATAGAAAATTGTTACAGGTGTGGCGTAACAATCGACTCGCAGTGCCTTTGCGACACCGTTTCATaGCTTCATGGGAAGAGTCGG +
Preference number: 2 (lower is better)
Translates to: MFIENCYRCGVTIDSQCLCDTVS*LHGKSR
Trigger: CCGACTCTTCCCATGAAGGCATGAAACGGTGTCGCA...AAGGCACTGCGAGTCGATTGTTACGCCACACCTGTAACAATTTTCTATAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
3UTR-3UTR CCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTCCATGTTTCTTAAACTaGGTTGCTTACACCCATGAT +
Preference number: 2 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSPCFLN*VAYTHD
Trigger: ATCATGGGTGTAAGCAACCCAGTTTAAGAAACATGG...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCACCATGTTTCTTAAACTaGGTTGCTTACACCCATGAT +
Preference number: 2 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPPCFLN*VAYTHD
Trigger: ATCATGGGTGTAAGCAACCCAGTTTAAGAAACATGG...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCATTCTGTAAAAGGAAGTaGGTAGAACTGTTTTGGGTT +
Preference number: 2 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPFCKRK*VELFWV
Trigger: AACCCAAAACAGTTCTACTCACTTCCTTTTACAGAA...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTTCTACTCCAGTACGATaGCACACAAACCCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: LNREATSAHVKHTWNQTASTPVR*HTNPGC
Trigger: GCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGA...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR GCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTCACACAAACCCTGGCTaGACTGGGGATTATGGGATC +
Preference number: 2 (lower is better)
Translates to: LNREATSAHVKHTWNQTAHTNPG*TGDYGI
Trigger: GATCCCATAATCCCCAGTGCAGCCAGGGTTTGTGTG...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR GCA 90 bp CATGAGATGTTTATAGAAAATTGTTACAGGTGTGGCGTAACAATCGACTCGCAGAAGACGCCAGAGTACTaGGACACCGTTTCATGCCTT +
Preference number: 2 (lower is better)
Translates to: HEMFIENCYRCGVTIDSQKTPEY*DTVSCL
Trigger: AAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTT...CTGCGAGTCGATTGTTACGCCACACCTGTAACAATTTTCTATAAACATCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
3UTR-3UTR CCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTTCCAGCACTGACAAATaGAGATATGAGCTCACTCAC +
Preference number: 2 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTSSTDK*RYELTH
Trigger: GTGAGTGAGCTCATATCTCCATTTGTCAGTGCTGGA...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGGAACTAGGACAAAAATaGCCCACTGGGAAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLELGQK*PTGKES
Trigger: GCTTTCTTTCCCAGTGGGTCATTTTTGTCCTAGTTC...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTGGCCTGCTGCACATGTaGCAGGACAGTTATTTCATC +
Preference number: 2 (lower is better)
Translates to: LNREATSAHVKHTWNQTAGLLHM*QDSYFI
Trigger: GATGAAATAACTGTCCTGTCACATGTGCAGCAGGCC...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR GCA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGAAGGTAGAGTCCGACTaGTTTTCTTGCCAATCTTTC +
Preference number: 2 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLKVESD*FSCQSF
Trigger: GAAAGATTGGCAAGAAAAGCAGTCGGACTCTACCTT...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp GAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACTTTGATCACTGGCTCTaGACAGACTCCAAAATAATC +
Preference number: 2 (lower is better)
Translates to: EPEFLITTDTVSTYMYIHFDHWL*TDSKII
Trigger: GATTATTTTGGAGTCTGTTCAGAGCCAGTGATCAAA...GTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
3UTR-3UTR CCA 90 bp TCCATTCTTAATTATAAGAGCTGCTTACTTCTGTGCACTGACATGGTAAGACAGCGACTCGGTAGCCAATaGAAAACCATTGTCAAGCAT +
Preference number: 2 (lower is better)
Translates to: SILNYKSCLLLCTDMVRQRLGSQ*KTIVKH
Trigger: ATGCTTGACAATGGTTTTCCATTGGCTACCGAGTCG...CTGTCTTACCATGTCAGTGCACAGAAGTAAGCAGCTCTTATAATTAAGAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
3UTR-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTCTTAGGTACTTCCCTTaGAACAGGATGAGTTCTAGA +
Preference number: 2 (lower is better)
Translates to: LNREATSAHVKHTWNQTALRYFP*NRMSSR
Trigger: TCTAGAACTCATCCTGTTTCAAGGGAAGTACCTAAG...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR GCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTAAGGTAGAGTCCGACTaGTTTTCTTGCCAATCTTTC +
Preference number: 2 (lower is better)
Translates to: LNREATSAHVKHTWNQTAKVESD*FSCQSF
Trigger: GAAAGATTGGCAAGAAAAGCAGTCGGACTCTACCTT...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTTTCTGTAAAAGGAAGTaGGTAGAACTGTTTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LNREATSAHVKHTWNQTAFCKRK*VELFWV
Trigger: AACCCAAAACAGTTCTACTCACTTCCTTTTACAGAA...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 72 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATaGCGGCAGCGATGCCCGCTACACTCCATGGCCTGC +
Preference number: 3 (lower is better)
Translates to: RHPALLMVMLQE*RQRCPLHSMAC
Trigger: GCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 72 bp CTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATaGCCGCTACACTCCATGGCCTGCTGCACATGTGAC +
Preference number: 3 (lower is better)
Translates to: LLMVMLQEWRQR*PLHSMACCTCD
Trigger: GTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGGTGGAACACATCTGGTaGTGTACAGTACACTATCCC +
Preference number: 3 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMVEHIW*CTVHYP
Trigger: GGGATAGTGTACTGTACACAACCAGATGTGTTCCAC...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR TCA 72 bp AAACAGCTCGATGGAGACACCCTGCACTGCTTATGGTaGTGCTGCAGGAATGGCGGCAGCGATGCCCGCTAC +
Preference number: 3 (lower is better)
Translates to: KQLDGDTLHCLW*CCRNGGSDARY
Trigger: GTAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCTCCATCGAGCTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGGGTGCTTCCAAGTACTaGAGAATCCACAGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPGASKY*RIHRQR
Trigger: TCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACC...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGGTCCGACTGCTTTTCTaGCCAATCTTTCATTTAAGT +
Preference number: 3 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMVRLLF*PIFHLS
Trigger: ACTTAAATGAAAGATTGGCAAGAAAAGCAGTCGGAC...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 72 bp TGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTaGACATGTGACAGGACAGTTATTTCATCTATGCTT +
Preference number: 3 (lower is better)
Translates to: WRQRCPLHSMAC*TCDRTVISSML
Trigger: AAGCATAGATGAAATAACTGTCCTGTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 72 bp GAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTaGTGCACATGTGACAGGACAGTTATTTCATCTATG +
Preference number: 3 (lower is better)
Translates to: EWRQRCPLHSMA*CTCDRTVISSM
Trigger: CATAGATGAAATAACTGTCCTGTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp GGAGGGATGAAGGAGAGGATGCGCTCAGATTCCCAGCGTTTGAAACGAACACAAGGCATGCCAGTCAGCTaGACACAGGCATCAATCACC +
Preference number: 3 (lower is better)
Translates to: GGMKERMRSDSQRLKRTQGMPVS*TQASIT
Trigger: GGTGATTGATGCCTGTGTCAAGCTGACTGGCATGCC...TTGTGTTCGTTTCAAACGCTGGGAATCTGAGCGCATCCTCTCCTTCATCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
3UTR TCA 72 bp CCTGTAGGTTCCTCAGGAGAGGTGCTTCCAAGTACTTaGGAATCCACAGGCAGAGATGCTTCCCTTTCCATG +
Preference number: 3 (lower is better)
Translates to: PVGSSGEVLPST*ESTGRDASLSM
Trigger: CATGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTCCTGAGGAACCTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 72 bp TTCCATGGTGGATGTGTATGTCACTCCAGGACAAACTaGGGAGTCACGGAGTGTGGAACACATCTGGTTGTG +
Preference number: 3 (lower is better)
Translates to: FHGGCVCHSRTN*GVTECGTHLVV
Trigger: CACAACCAGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACATCCACCATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 72 bp GAGAATCCACAGGCAGAGATGCTTCCCTTTCCATGGTaGATGTGTATGTCACTCCAGGACAAACTGCGGAGT +
Preference number: 3 (lower is better)
Translates to: ENPQAEMLPFPW*MCMSLQDKLRS
Trigger: ACTCCGCAGTTTGTCCTGGAGTGACATACACATCCACCATGGAAAGGGAAGCATCTCTGCCTGTGGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 72 bp ATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTaGAACACATCTGGTTGTGTACAGTACACTATCCCA +
Preference number: 3 (lower is better)
Translates to: MSLQDKLRSHGV*NTSGCVQYTIP
Trigger: TGGGATAGTGTACTGTACACAACCAGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 72 bp GCACATGTTAAACACACATGGAACCAAACAGCTCGATaGAGACACCCTGCACTGCTTATGGTGATGCTGCAG +
Preference number: 3 (lower is better)
Translates to: AHVKHTWNQTAR*RHPALLMVMLQ
Trigger: CTGCAGCATCACCATAAGCAGTGCAGGGTGTCTCCATCGAGCTGTTTGGTTCCATGTGTGTTTAACATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 72 bp AAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATaGAGATATGAGCTCACTCACTCACAGCTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: KVTIWYQSSTDK*RYELTHSQLCS
Trigger: TGAGCACAGCTGTGAGTGAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 72 bp GGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTaGTTGTGTACAGTACACTATCCCAGAGGAAAATCA +
Preference number: 3 (lower is better)
Translates to: GQTAESRSVEHI*LCTVHYPRGKS
Trigger: TGATTTTCCTCTGGGATAGTGTACTGTACACAACCAGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATACCATCATGGTCTTaGAGGGAAAATCTGATTCCA +
Preference number: 3 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDIPSWS*RENLIP
Trigger: TGGAATCAGATTTTCCCTCAAAGACCATGATGGTAT...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR GCA 72 bp CCTGCTGCACATGTGACAGGACAGTTATTTCATCTATaGTTACACCTGCAGGTCCCTTACCCTAGAAACACT +
Preference number: 3 (lower is better)
Translates to: PAAHVTGQLFHL*LHLQVPYPRNT
Trigger: AGTGTTTCTAGGGTAAGGGACCTGCAGGTGTAAGCATAGATGAAATAACTGTCCTGTCACATGTGCAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 72 bp ATGGAAAAGTTTCCGACCAACGGGAAGGTTACGATCTaGTACCAGTCCAGCACTGACAAATGGAGATATGAG +
Preference number: 3 (lower is better)
Translates to: MEKFPTNGKVTI*YQSSTDKWRYE
Trigger: CTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR CCA 72 bp AACAGAGAAGCTACTTCTGCACATGTTAAACACACATaGAACCAAACAGCTCGATGGAGACACCCTGCACTG +
Preference number: 3 (lower is better)
Translates to: NREATSAHVKHT*NQTARWRHPAL
Trigger: CAGTGCAGGGTGTCTCCATCGAGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACTTAAGTGGCCTTTCCTaGACTGACATTCATTTTCTT +
Preference number: 3 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDLSGLS*TDIHFL
Trigger: AAGAAAATGAATGTCAGTCAAGGAAAGGCCACTTAA...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCAGTCCGACTGCTTTTCTaGCCAATCTTTCATTTAAGT +
Preference number: 3 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPVRLLF*PIFHLS
Trigger: ACTTAAATGAAAGATTGGCAAGAAAAGCAGTCGGAC...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCATACCATCATGGTCTTaGAGGGAAAATCTGATTCCA +
Preference number: 3 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELIPSWS*RENLIP
Trigger: TGGAATCAGATTTTCCCTCAAAGACCATGATGGTAT...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCTTAAGTGGCCTTTCCTaGACTGACATTCATTTTCTT +
Preference number: 3 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELLSGLS*TDIHFL
Trigger: AAGAAAATGAATGTCAGTCAAGGAAAGGCCACTTAA...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR TCA 72 bp AGAAGCTGGAATGTGAACCCAGGTAACTCTAGAGCCTaGGTTCTTAATCACCACAGATACGGTTTCCACATA +
Preference number: 3 (lower is better)
Translates to: RSWNVNPGNSRA*VLNHHRYGFHI
Trigger: TATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTACCTGGGTTCACATTCCAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
3UTR CCA 72 bp AACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTaGAGAGTACGGGTCTTCCTTTTTCTCCATGCACCA +
Preference number: 3 (lower is better)
Translates to: NFAQYLEKSSRV*RVRVFLFLHAP
Trigger: TGGTGCATGGAGAAAAAGGAAGACCCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGGTCCGACTGCTTTTCTaGCCAATCTTTCATTTAAGT +
Preference number: 3 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRVRLLF*PIFHLS
Trigger: ACTTAAATGAAAGATTGGCAAGAAAAGCAGTCGGAC...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR-3UTR CAA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGATACCATCATGGTCTTaGAGGGAAAATCTGATTCCA +
Preference number: 3 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRIPSWS*RENLIP
Trigger: TGGAATCAGATTTTCCCTCAAAGACCATGATGGTAT...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR TCA 72 bp TTAAATAGTAACAGACACACTGAACTAGGACAAAAATaGCCCACTGGGAAAGAAAGCCTGAGGTATCCCTTT +
Preference number: 3 (lower is better)
Translates to: LNSNRHTELGQK*PTGKESLRYPF
Trigger: AAAGGGATACCTCAGGCTTTCTTTCCCAGTGGGTCATTTTTGTCCTAGTTCAGTGTGTCTGTTACTATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
3UTR TCA 72 bp CCTAGAAACACTCTATATCTTCTTAGGTACTTCCCTTaGAACAGGATGAGTTCTAGAGGAAATAAAACTGCT +
Preference number: 3 (lower is better)
Translates to: PRNTLYLLRYFP*NRMSSRGNKTA
Trigger: AGCAGTTTTATTTCCTCTAGAACTCATCCTGTTTCAAGGGAAGTACCTAAGAAGATATAGAGTGTTTCTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGCCAAAAGGCCCTCCCTaGCCTTGCTGCTCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMPKGPP*PCCSQR
Trigger: GCGCTGAGAGCAGCAAGGCCAGGGAGGGCCTTTTGG...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000174653.3
CDS-3UTR TCA 90 bp CAGCTTGACACAGGCATCAATCACCCCCTGGATCTCAGCAGTAATTGTGGAGCCGGGCAGGGGCCTGGCTaGAGGGGCACGCGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: QLDTGINHPLDLSSNCGAGQGPG*RGTRVP
Trigger: CGGAACGCGCGTGCCCCTTCAGCCAGGCCCCTGCCC...GGCTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp CAGCTTGACACAGGCATCAATCACCCCCTGGATCTCAGCAGTAATTGTGGAGCCCGCAGAGGCCTGCGGTaGCCAGCGCCGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QLDTGINHPLDLSSNCGARRGLR*PAPPGG
Trigger: TCCTCCAGGCGGCGCTGGGCACCGCAGGCCTCTGCG...GGCTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGGCCCGCTACACTCCATaGCCTGCTGCACATGTGACA +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMARYTP*PAAHVT
Trigger: TGTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGC...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGGGCCTGCTGCACATGTaGCAGGACAGTTATTTCATC +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMGLLHM*QDSYFI
Trigger: GATGAAATAACTGTCCTGTCACATGTGCAGCAGGCC...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACAGAATGGCGGCAGCGATaGCCGCTACACTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTEWRQR*PLHSMA
Trigger: GGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTC...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGAACCAAACAGCTCGATaGAGACACCCTGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMNQTAR*RHPALL
Trigger: AAGCAGTGCAGGGTGTCTCCATCGAGCTGTTTGGTT...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACCCACGATCTGCGCCTaGAGGCCGCTGATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTPTICA*RPLIGY
Trigger: ATACCCAATCAGCGGCCTTCAGGCGCAGATCGTGGG...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000174653.3
ENST00000518421.5
CDS-3UTR TCA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGCCAGACGATTCACCTTaGGTCCAGAAATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPPDDSP*VQKWPA
Trigger: AGCTGGCCATTTCTGGACTCAAGGTGAATCGTCTGG...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGACCCCCTTGGGCATCTaGCTGGTGACAGTCACTCCC +
Preference number: 4 (lower is better)
Translates to: SWEESALYSSTMTHKPWLTPLGI*LVTVTP
Trigger: GGGAGTGACTGTCACCAGCCAGATGCCCAAGGGGGT...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGCAGCCTGAAGACTCATaGTCCCCTTCAAACTTGGTA +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMQPEDS*SPSNLV
Trigger: TACCAAGTTTGAAGGGGACCATGAGTCTTCAGGCTG...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGGGTTTTCATCTGGTTTaGAAGCTCCAGCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMGFHLV*KLQPED
Trigger: GTCTTCAGGCTGGAGCTTCCAAACCAGATGAAAACC...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGCTTCAGGTTCGAACTTaGAACTTCCCAGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMLQVRT*NFPALV
Trigger: GACCAAAGCTGGGAAGTTCCAAGTTCGAACCTGAAG...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGAAAAGCTCTAGGGTGTaGAGAGTACGGGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMKSSRV*RVRVFL
Trigger: AAGGAAGACCCGTACTCTCCACACCCTAGAGCTTTT...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACCGCCCGGCTGCATCCTaGGACCCCGCCCCGACCCTC +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYRPAAS*DPAPTL
Trigger: GAGGGTCGGGGCGGGGTCTCAGGATGCAGCCGGGCG...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACGAATGGCGGCAGCGATaGCCGCTACACTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDEWRQR*PLHSMA
Trigger: GGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTC...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGTCGATGGAGACACCCTaGACTGCTTATGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPSMETP*TAYGDA
Trigger: AGCATCACCATAAGCAGTGCAGGGTGTCTCCATCGA...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGCGACTCGGTAGCCAATaGAAAACCATTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMRLGSQ*KTIVKH
Trigger: ATGCTTGACAATGGTTTTCCATTGGCTACCGAGTCG...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGGCATGCCAGTCAGCTTaGCACAGGCATCAATCACCC +
Preference number: 4 (lower is better)
Translates to: SWEESALYSSTMTHKPWLACQSA*HRHQSP
Trigger: GGGTGATTGATGCCTGTGTCAAGCTGACTGGCATGC...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCATTCCATCAGGAGGGATaGAGGAGAGGATGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAAFHQEG*RRGCAQ
Trigger: CTGAGCGCATCCTCTCCTTCATCCCTCCTGATGGAA...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGAAGACAGCATCTTTGTaGCTGGGTCGAATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPKTASL*LGRMCV
Trigger: CACACACATTCGACCCAGTCACAAAGATGCTGTCTT...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGAAGGTAGAGTCCGACTaGTTTTCTTGCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMKVESD*FSCQSF
Trigger: GAAAGATTGGCAAGAAAAGCAGTCGGACTCTACCTT...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GACGCCAGAGTACTGCGACACCGTTTCATGCCTTCATGGGAAGAGTCGGCCCTCAAGACGCCAGAGTACTaGGACACCGTTTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: DARVLRHRFMPSWEESALKTPEY*DTVSCL
Trigger: AAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTT...GAGGGCCGACTCTTCCCATGAAGGCATGAAACGGTGTCGCAGTACTCTGGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR CCA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGGCATCAATCACCCCCTaGATCTCAGCAGTAATTGTG +
Preference number: 4 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPASITP*ISAVIV
Trigger: CACAATTACTGCTGAGATCCAGGGGGTGATTGATGC...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACACCCCCTTGGGCATCTaGCTGGTGACAGTCACTCCC +
Preference number: 4 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDTPLGI*LVTVTP
Trigger: GGGAGTGACTGTCACCAGCCAGATGCCCAAGGGGGT...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGAGTCCGATACCATCATaGTCTTTGAGGGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMSPIPS*SLRENL
Trigger: CAGATTTTCCCTCAAAGACCATGATGGTATCGGACT...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACTGTGCTCACCTTCATaGGAAGAGTCGGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTLCSPS*EESALY
Trigger: GTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAG...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATGTGATGCTGCAGGAATaGCGGCAGCGATGCCCGCTA +
Preference number: 4 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDVMLQE*RQRCPL
Trigger: TAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCAC...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACCAGATTCTGTGCACTaGCATGGTAAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTPDSVH*HGKTAG
Trigger: GCCTGCTGTCTTACCATGTCAGTGCACAGAATCTGG...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACCAGACGATTCACCTTaGGTCCAGAAATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTPDDSP*VQKWPA
Trigger: AGCTGGCCATTTCTGGACTCAAGGTGAATCGTCTGG...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCATCTACTCCAGTACGATaGCACACAAACCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAASTPVR*HTNPGC
Trigger: GCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGA...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
ENST00000520689.1
CDS-3UTR TCA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGTCTACTCCAGTACGATaGCACACAAACCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SWEESALYSSTMTHKPWLSTPVR*HTNPGC
Trigger: GCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGA...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
ENST00000520689.1
CDS-3UTR TCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATCTGCACTGCTTATGGTaGTGCTGCAGGAATGGCGGC +
Preference number: 4 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDLHCLW*CCRNGG
Trigger: GCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAG...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCACGCGCGTTCCGGGGTaGAGAGCGCAGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFTRVPG*RAQGCR
Trigger: CCGGCACCCCTGCGCTCTTCACCCCGGAACGCGCGT...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCACACTCCATGGCCTGCTaGACATGTGACAGGACAGTT +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAAHSMAC*TCDRTV
Trigger: AACTGTCCTGTCACATGTGCAGCAGGCCATGGAGTG...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACTACACTCCATGGCCTaGTGCACATGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTLHSMA*CTCDRT
Trigger: TGTCCTGTCACATGTGCAGCAGGCCATGGAGTGTAG...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCATGCGACACCGTTTCATaGCTTCATGGGAAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAACDTVS*LHGKSR
Trigger: CCGACTCTTCCCATGAAGGCATGAAACGGTGTCGCA...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR CCA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGGACTATGGATCATGGTaGCGATTGTCAGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPDYGSW*RLSVTE
Trigger: TTCTGTCACTGACAATCGCCACCATGATCCATAGTC...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGATCAAGAAAAGACTATaGATCATGGTGGCGATTGTC +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMIKKRL*IMVAIV
Trigger: GACAATCGCCACCATGATCCATAGTCTTTTCTTGAT...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACAAAACCCTGGCTGCACTaGGGATTATGGGATCGGCTT +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTKPWLH*GLWDRL
Trigger: AAGCCGATCCCATAATCCCCAGTGCAGCCAGGGTTT...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGAGTGTGGAACACATCTaGTTGTGTACAGTACACTAT +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMSVEHI*LCTVHY
Trigger: ATAGTGTACTGTACACAACCAGATGTGTTCCACACT...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCGTGATGCTGCAGGAATaGCGGCAGCGATGCCCGCTA +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELVMLQE*RQRCPL
Trigger: TAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCAC...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGTGTGTGTGTCCCCTGTaGTGGAGTAAGGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMCVCPL*WSKAHV
Trigger: AACATGAGCCTTACTCCATCACAGGGGACACACACA...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCATGTGTGTGTCCCCTGTaGTGGAGTAAGGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAACVCPL*WSKAHV
Trigger: AACATGAGCCTTACTCCATCACAGGGGACACACACA...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATTTGGAAGCTCCAGCCTaGAGACTCATGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDLEAPA*RLMVPF
Trigger: GAAGGGGACCATGAGTCTTCAGGCTGGAGCTTCCAA...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGTTCTGTAAAAGGAAGTaGGTAGAACTGTTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMFCKRK*VELFWV
Trigger: AACCCAAAACAGTTCTACTCACTTCCTTTTACAGAA...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGCCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTCTACTCCAGTACGATaGCACACAAACCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MPSWEESALYSSTMTHKPSTPVR*HTNPGC
Trigger: GCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGA...GGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR TCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACAGGCCTGCTGCACATGTaGCAGGACAGTTATTTCATC +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTGLLHM*QDSYFI
Trigger: GATGAAATAACTGTCCTGTCACATGTGCAGCAGGCC...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTCTGCACTGCTTATGGTaGTGCTGCAGGAATGGCGGC +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFLHCLW*CCRNGG
Trigger: GCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAG...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACCAAAACGCAGAGGCCTaGGGTGCCCAGCGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EPEFLITTDTVSTYMYIHQNAEA*GAQRRL
Trigger: CAGGCGGCGCTGGGCACCGCAGGCCTCTGCGTTTTG...GTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACATCCCCATCGTCTGCTTaGGTCCCACCGTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTSPSSA*VPPLFQ
Trigger: TTGAAATAACGGTGGGACCCAAGCAGACGATGGGGA...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp AGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCACCCCCTTGGGCATCTaGCTGGTGACAGTCACTCCC +
Preference number: 4 (lower is better)
Translates to: RLRSGTSPALTNGDMSSLTPLGI*LVTVTP
Trigger: GGGAGTGACTGTCACCAGCCAGATGCCCAAGGGGGT...GAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAGCATCTTTGTGACTaGGTCGAATGTGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTQHLCD*VECVCP
Trigger: GGGACACACACATTCGACCCAGTCACAAAGATGCTG...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGCAGCATCTTTGTGACTaGGTCGAATGTGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMQHLCD*VECVCP
Trigger: GGGACACACACATTCGACCCAGTCACAAAGATGCTG...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGTGTGGGGTTTTCATCTaGTTTGGAAGCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SWEESALYSSTMTHKPWLCGVFI*FGSSSL
Trigger: CAGGCTGGAGCTTCCAAACCAGATGAAAACCCCACA...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCATGTGGGGTTTTCATCTaGTTTGGAAGCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAACGVFI*FGSSSL
Trigger: CAGGCTGGAGCTTCCAAACCAGATGAAAACCCCACA...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGATGACACACAAACCCTaGCTGCACTGGGGATTATGG +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMMTHKP*LHWGLW
Trigger: CCATAATCCCCAGTGCAGCCAGGGTTTGTGTGTCAT...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCAGCCCGCTACACTCCATaGCCTGCTGCACATGTGACA +
Preference number: 4 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPARYTP*PAAHVT
Trigger: TGTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGC...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGGTGATGCTGCAGGAATaGCGGCAGCGATGCCCGCTA +
Preference number: 4 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQVMLQE*RQRCPL
Trigger: TAGCGGGCATCGCTGCCGCCATTCCTGCAGCATCAC...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGAGGGATGAAGGAGAGGATGCGCTCAGATTCCCAGCGTTTGAAACGAACACAAACGGTTGCATCTCTCTaGTGCCAGTCGCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: GGMKERMRSDSQRLKRTQTVASL*CQSPGC
Trigger: ACATCCTGGCGACTGGCACCAGAGAGATGCAACCGT...TTGTGTTCGTTTCAAACGCTGGGAATCTGAGCGCATCCTCTCCTTCATCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp AGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCGAAGATAGCCCTCCCTaGCCTTGCTGCTCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: RLRSGTSPALTNGDMSSLEDSPP*PCCSQR
Trigger: GCGCTGAGAGCAGCAAGGCCAGGGAGGGCTATCTTC...GAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518421.5
CDS-3UTR TCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCAGCATGCCAGTCAGCTTaGCACAGGCATCAATCACCC +
Preference number: 4 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPACQSA*HRHQSP
Trigger: GGGTGATTGATGCCTGTGTCAAGCTGACTGGCATGC...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTTTCCATCAGGAGGGATaGAGGAGAGGATGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSFHQEG*RRGCAQ
Trigger: CTGAGCGCATCCTCTCCTTCATCCCTCCTGATGGAA...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACCCAGATTCTGTGCACTaGCATGGTAAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDPDSVH*HGKTAG
Trigger: GCCTGCTGTCTTACCATGTCAGTGCACAGAATCTGG...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTTTGGAAGCTCCAGCCTaGAGACTCATGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSLEAPA*RLMVPF
Trigger: GAAGGGGACCATGAGTCTTCAGGCTGGAGCTTCCAA...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp CAGGTGTGGCGTAACAATCGACTCGCAGTGCCTTATCTTGTAAGAAGCCTCTCCCCAGACGATTCACCTTaGGTCCAGAAATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QVWRNNRLAVPYLVRSLSPDDSP*VQKWPA
Trigger: AGCTGGCCATTTCTGGACTCAAGGTGAATCGTCTGG...GGAGAGGCTTCTTACAAGATAAGGCACTGCGAGTCGATTGTTACGCCACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR TCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACTCTACTCCAGTACGATaGCACACAAACCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDSTPVR*HTNPGC
Trigger: GCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGA...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCGCCCTCCCCGAACTCTaGACCCGGCCCCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFALPEL*TRPLTS
Trigger: AGAGGTGAGGGGCCGGGTTCAGAGTTCGGGGAGGGC...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGTGCTGGATCTTAAACTaGAGGTTAATTGTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPCWILN*RLIVGF
Trigger: AAACCCCACAATTAACCTGCAGTTTAAGATCCAGCA...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCACACTCCAGGACAAACTaGGGAGTCACGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPHSRTN*GVTECG
Trigger: TCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTG...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GTCAGCTTGACACAGGCATCAATCACCCCCTGGATCTCAGCAGTAATTGTGGAGCCAATCTTCCCCTCCTaGATGAGCCTGAAGATAGCC +
Preference number: 4 (lower is better)
Translates to: VSLTQASITPWISAVIVEPIFPS*MSLKIA
Trigger: GGCTATCTTCAGGCTCATGCAGGAGGGGAAGATTGG...CTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGACTCCTCACCTGGCCTTaGTGCTCTCAGCGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSRLLTWP*CSQRPL
Trigger: CAGTGGGCGCTGAGAGCAGCAAGGCCAGGTGAGGAG...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACCGAGCGCACGTGCGCTaGCATGGCAACAGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYRAHVR*HGNSVP
Trigger: GGGGACACTGTTGCCATGGCAGCGCACGTGCGCTCG...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp GTAACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGGCCAGCGAGCGCACGTaGGCTGCCATGGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: VTLEPEFLITTDTVSTYMASERT*AAMATV
Trigger: CACTGTTGCCATGGCAGCGCACGTGCGCTCGCTGGC...CATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCAGGTTTTCATCTGGTTTaGAAGCTCCAGCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAAGFHLV*KLQPED
Trigger: GTCTTCAGGCTGGAGCTTCCAAACCAGATGAAAACC...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACTTCAGGTTCGAACTTaGAACTTCCCAGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTLQVRT*NFPALV
Trigger: GACCAAAGCTGGGAAGTTCCAAGTTCGAACCTGAAG...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCCTCTCCTGGAATAAAGACGCCAGAGTACTGCGACACCGTTTCATGCCTTCATAAACCCTGGCTGCACTaGGGATTATGGGATCGGCTT +
Preference number: 4 (lower is better)
Translates to: ASPGIKTPEYCDTVSCLHKPWLH*GLWDRL
Trigger: AAGCCGATCCCATAATCCCCAGTGCAGCCAGGGTTT...ATGAAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTTTATTCCAGGAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR CCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTCTGTGCTCACCTTCATaGGAAGAGTCGGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSLCSPS*EESALY
Trigger: GTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAG...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACTTCCCTTTCCATGGTaGATGTGTATGTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTLPFPW*MCMSLQ
Trigger: CTGGAGTGACATACACATCCACCATGGAAAGGGAAG...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTCCCACGATCTGCGCCTaGAGGCCGCTGATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTPTICA*RPLIGY
Trigger: ATACCCAATCAGCGGCCTTCAGGCGCAGATCGTGGG...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000174653.3
ENST00000518421.5
CDS-3UTR TCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGCACAAACAGAACGGCTaGCCACACTTTTCCAATGTT +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMHKQNG*PHFSNV
Trigger: AACATTGGAAAAGTGTGGTCAGCCGTTCTGTTTGTG...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACATGCAACCAGATTCTGTaGACTGACATGGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTCNQIL*TDMVRQ
Trigger: CTGTCTTACCATGTCAGTGCACAGAATCTGGTTGCA...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGTGCAACCAGATTCTGTaGACTGACATGGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMCNQIL*TDMVRQ
Trigger: CTGTCTTACCATGTCAGTGCACAGAATCTGGTTGCA...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCCACACAAACCCTGGCTaGACTGGGGATTATGGGATC +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELHTNPG*TGDYGI
Trigger: GATCCCATAATCCCCAGTGCAGCCAGGGTTTGTGTG...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGATCTATGCTTACACCTaGAGGTCCCTTACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMIYAYT*RSLTLE
Trigger: TTCTAGGGTAAGGGACCTGCAGGTGTAAGCATAGAT...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTCACTCCATGGCCTGCTaGACATGTGACAGGACAGTT +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFHSMAC*TCDRTV
Trigger: AACTGTCCTGTCACATGTGCAGCAGGCCATGGAGTG...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTCTACACTCCATGGCCTaGTGCACATGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFLHSMA*CTCDRT
Trigger: TGTCCTGTCACATGTGCAGCAGGCCATGGAGTGTAG...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACTCGATGGAGACACCCTaGACTGCTTATGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDSMETP*TAYGDA
Trigger: AGCATCACCATAAGCAGTGCAGGGTGTCTCCATCGA...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCACGACTCGGTAGCCAATaGAAAACCATTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAARLGSQ*KTIVKH
Trigger: ATGCTTGACAATGGTTTTCCATTGGCTACCGAGTCG...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGCGACTCGGTAGCCAATaGAAAACCATTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMRLGSQ*KTIVKH
Trigger: ATGCTTGACAATGGTTTTCCATTGGCTACCGAGTCG...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACTGTGGGGTTTTCATCTaGTTTGGAAGCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDCGVFI*FGSSSL
Trigger: CAGGCTGGAGCTTCCAAACCAGATGAAAACCCCACA...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTGGGAAGGTTACGATCTaGTACCAGTCCAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFGKVTI*YQSSTD
Trigger: GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCAGGGAAGGTTACGATCTaGTACCAGTCCAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPGKVTI*YQSSTD
Trigger: GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCGCGAACCGGCGCGGGTaGTCAAAACGCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFANRRG*SKRRGL
Trigger: CAGGCCTCTGCGTTTTGACCACCCGCGCCGGTTCGC...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTCGTTTCATGCCTTCATaGGAAGAGTCGGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFRFMPS*EESALY
Trigger: GTAGAGGGCCGACTCTTCCCATGAAGGCATGAAACG...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR TCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATGTGCTTCCAAGTACTTaGGAATCCACAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDVLPST*ESTGRD
Trigger: ATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCAC...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTGGCCTGCTGCACATGTaGCAGGACAGTTATTTCATC +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSGLLHM*QDSYFI
Trigger: GATGAAATAACTGTCCTGTCACATGTGCAGCAGGCC...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCGGACCAGCGAGCACTTaGAAGGTGGCTGGTGCGGAC +
Preference number: 4 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFGPAST*KVAGAD
Trigger: GTCCGCACCAGCCACCTTTCAAGTGCTCGCTGGTCC...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGAAGGTAGAGTCCGACTaGTTTTCTTGCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMKVESD*FSCQSF
Trigger: GAAAGATTGGCAAGAAAAGCAGTCGGACTCTACCTT...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTTCGATGGAGACACCCTaGACTGCTTATGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSSMETP*TAYGDA
Trigger: AGCATCACCATAAGCAGTGCAGGGTGTCTCCATCGA...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp AGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCCCAATCTTCCCCTCCTaGATGAGCCTGAAGATAGCC +
Preference number: 4 (lower is better)
Translates to: RLRSGTSPALTNGDMSSLPIFPS*MSLKIA
Trigger: GGCTATCTTCAGGCTCATGCAGGAGGGGAAGATTGG...GAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518421.5
CDS-3UTR CCA 90 bp CAGCTTGACACAGGCATCAATCACCCCCTGGATCTCAGCAGTAATTGTGGAGCCGACTATGGATCATGGTaGCGATTGTCAGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: QLDTGINHPLDLSSNCGADYGSW*RLSVTE
Trigger: TTCTGTCACTGACAATCGCCACCATGATCCATAGTC...GGCTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGAAAGACTATGGATCATaGTGGCGATTGTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: SWEESALYSSTMTHKPWLKDYGS*WRLSVT
Trigger: TGTCACTGACAATCGCCACCATGATCCATAGTCTTT...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTTCCCCATCGTCTGCTTaGGTCCCACCGTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSSPSSA*VPPLFQ
Trigger: TTGAAATAACGGTGGGACCCAAGCAGACGATGGGGA...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGAGTCCGATACCATCATaGTCTTTGAGGGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: SWEESALYSSTMTHKPWLSPIPS*SLRENL
Trigger: CAGATTTTCCCTCAAAGACCATGATGGTATCGGACT...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCAATGACACACAAACCCTaGCTGCACTGGGGATTATGG +
Preference number: 4 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPMTHKP*LHWGLW
Trigger: CCATAATCCCCAGTGCAGCCAGGGTTTGTGTGTCAT...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTATGACACACAAACCCTaGCTGCACTGGGGATTATGG +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSMTHKP*LHWGLW
Trigger: CCATAATCCCCAGTGCAGCCAGGGTTTGTGTGTCAT...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp AATAAAGACGCCAGAGTACTGCGACACCGTTTCATGCCTTCATGGGAAGAGTCGATGACACACAAACCCTaGCTGCACTGGGGATTATGG +
Preference number: 4 (lower is better)
Translates to: NKDARVLRHRFMPSWEESMTHKP*LHWGLW
Trigger: CCATAATCCCCAGTGCAGCCAGGGTTTGTGTGTCAT...CGACTCTTCCCATGAAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR CCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAAAGCTCTAGGGTGTaGAGAGTACGGGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDKSSRV*RVRVFL
Trigger: AAGGAAGACCCGTACTCTCCACACCCTAGAGCTTTT...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATAAAAGCTCTAGGGTGTaGAGAGTACGGGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDKSSRV*RVRVFL
Trigger: AAGGAAGACCCGTACTCTCCACACCCTAGAGCTTTT...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCACGGAGTCACGGAGTGTaGAACACATCTGGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPRSHGV*NTSGCV
Trigger: TACACAACCAGATGTGTTCCACACTCCGTGACTCCG...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCCGGAGTCACGGAGTGTaGAACACATCTGGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELRSHGV*NTSGCV
Trigger: TACACAACCAGATGTGTTCCACACTCCGTGACTCCG...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATCTTCCCTTTCCATGGTaGATGTGTATGTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDLPFPW*MCMSLQ
Trigger: CTGGAGTGACATACACATCCACCATGGAAAGGGAAG...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCAACCAAACAGCTCGATaGAGACACCCTGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELNQTAR*RHPALL
Trigger: AAGCAGTGCAGGGTGTCTCCATCGAGCTGTTTGGTT...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTAACCAAACAGCTCGATaGAGACACCCTGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFNQTAR*RHPALL
Trigger: AAGCAGTGCAGGGTGTCTCCATCGAGCTGTTTGGTT...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCATGTTAAACACACATaGAACCAAACAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: SWEESALYSSTMTHKPWLHVKHT*NQTARW
Trigger: CCATCGAGCTGTTTGGTTCCATGTGTGTTTAACATG...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCGTAAGTTTTCAACTCTaGCCTTGCTGCTCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELVSFQL*PCCSQR
Trigger: GCGCTGAGAGCAGCAAGGCCAGAGTTGAAAACTTAC...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396926.8
3UTR CAA 72 bp TCCTGTAGGTTCCTCAGGAGAGGTGCTTCCAAGTACTaGAGAATCCACAGGCAGAGATGCTTCCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SCRFLRRGASKY*RIHRQRCFPFH
Trigger: ATGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTCCTGAGGAACCTACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GTCAGCTTGACACAGGCATCAATCACCCCCTGGATCTCAGCAGTAATTGTGGAGCACAAACAGAACGGCTaGCCACACTTTTCCAATGTT +
Preference number: 4 (lower is better)
Translates to: VSLTQASITPWISAVIVEHKQNG*PHFSNV
Trigger: AACATTGGAAAAGTGTGGTCAGCCGTTCTGTTTGTG...CTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGTTTGATCACTGGCTCTaGACAGACTCCAAAATAATC +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMFDHWL*TDSKII
Trigger: GATTATTTTGGAGTCTGTTCAGAGCCAGTGATCAAA...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACATTTGATCACTGGCTCTaGACAGACTCCAAAATAATC +
Preference number: 4 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTFDHWL*TDSKII
Trigger: GATTATTTTGGAGTCTGTTCAGAGCCAGTGATCAAA...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTGCATGCCAGTCAGCTTaGCACAGGCATCAATCACCC +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTACQSA*HRHQSP
Trigger: GGGTGATTGATGCCTGTGTCAAGCTGACTGGCATGC...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCCAGATTCCCAGCGTTTaGAACGAACACAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELQIPSV*NEHKDG
Trigger: TCCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTG...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTCAGATTCCCAGCGTTTaGAACGAACACAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFQIPSV*NEHKDG
Trigger: TCCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTG...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGATTCCATCAGGAGGGATaGAGGAGAGGATGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSRFHQEG*RRGCAQ
Trigger: CTGAGCGCATCCTCTCCTTCATCCCTCCTGATGGAA...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCAAGACAGCATCTTTGTaGCTGGGTCGAATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELKTASL*LGRMCV
Trigger: CACACACATTCGACCCAGTCACAAAGATGCTGTCTT...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGCTGGGAAAGAAAGCCTaGGGTATCCCTTTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQLGKKA*GIPLVA
Trigger: GGCAACTAAAGGGATACCTCAGGCTTTCTTTCCCAG...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACGAACTAGGACAAAAATaGCCCACTGGGAAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDELGQK*PTGKES
Trigger: GCTTTCTTTCCCAGTGGGTCATTTTTGTCCTAGTTC...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGAGAACCGCAAACTCCTTaGAGAAAAGGGCCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSREPQTP*RKGPCL
Trigger: GAGGCACGGCCCTTTTCTTCAAGGAGTTTGCGGTTC...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp GCCTCTCCTGGAATAAAGACGCCAGAGTACTGCGACACCGTTTCATGCCTTCATAGTAGAACTTGTCCTTaGGAACTGGTGTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ASPGIKTPEYCDTVSCLHSRTCP*ELVLLC
Trigger: ACACAGCAACACCAGTTCTCAAGGACAAGTTCTACT...ATGAAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTTTATTCCAGGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR GCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTGAATGGCGGCAGCGATaGCCGCTACACTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTAEWRQR*PLHSMA
Trigger: GGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTC...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GTCAGCTTGACACAGGCATCAATCACCCCCTGGATCTCAGCAGTAATTGTGGAGAAGGGGCCGGTATGTTaGATGAGAACTGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: VSLTQASITPWISAVIVEKGPVC*MRTEIP
Trigger: TGGAATTTCAGTTCTCATGCAACATACCGGCCCCTT...CTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTGCATCAATCACCCCCTaGATCTCAGCAGTAATTGTG +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFASITP*ISAVIV
Trigger: CACAATTACTGCTGAGATCCAGGGGGTGATTGATGC...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGCAGCATCTTTGTGACTaGGTCGAATGTGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQQHLCD*VECVCP
Trigger: GGGACACACACATTCGACCCAGTCACAAAGATGCTG...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTCAGCCTGAAGACTCATaGTCCCCTTCAAACTTGGTA +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFQPEDS*SPSNLV
Trigger: TACCAAGTTTGAAGGGGACCATGAGTCTTCAGGCTG...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCACAGCCTGAAGACTCATaGTCCCCTTCAAACTTGGTA +
Preference number: 4 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPQPEDS*SPSNLV
Trigger: TACCAAGTTTGAAGGGGACCATGAGTCTTCAGGCTG...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTCTGTGCTCACCTTCATaGGAAGAGTCGGCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTLCSPS*EESALY
Trigger: GTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAG...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGAGTGTGGAACACATCTaGTTGTGTACAGTACACTAT +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMSVEHI*LCTVHY
Trigger: ATAGTGTACTGTACACAACCAGATGTGTTCCACACT...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GCCTCTCCTGGAATAAAGACGCCAGAGTACTGCGACACCGTTTCATGCCTTCATGTAAGAAGCCTCTCCTaGAATAAAGACGCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: ASPGIKTPEYCDTVSCLHVRSLS*NKDARV
Trigger: TACTCTGGCGTCTTTATTCCAGGAGAGGCTTCTTAC...ATGAAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTTTATTCCAGGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR TCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATCAACTACATTGTCTTTaGTCACTGGCTCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDQLHCL*SLALNR
Trigger: TCTGTTCAGAGCCAGTGATCAAAGACAATGTAGTTG...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACGCATGCCAGTCAGCTTaGCACAGGCATCAATCACCC +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYACQSA*HRHQSP
Trigger: GGGTGATTGATGCCTGTGTCAAGCTGACTGGCATGC...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGTTGGAAGCTCCAGCCTaGAGACTCATGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLLEAPA*RLMVPF
Trigger: GAAGGGGACCATGAGTCTTCAGGCTGGAGCTTCCAA...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTGAACTAGGACAAAAATaGCCCACTGGGAAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSELGQK*PTGKES
Trigger: GCTTTCTTTCCCAGTGGGTCATTTTTGTCCTAGTTC...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGTCCCTTGAAACAGGATaGGTTCTAGAGGAAATAAAA +
Preference number: 4 (lower is better)
Translates to: SQLCSPSWEESALYSSTMSLETG*VLEEIK
Trigger: TTTTATTTCCTCTAGAACTCATCCTGTTTCAAGGGA...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCATCCCTTGAAACAGGATaGGTTCTAGAGGAAATAAAA +
Preference number: 4 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAASLETG*VLEEIK
Trigger: TTTTATTTCCTCTAGAACTCATCCTGTTTCAAGGGA...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATGCCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTTCTGTAAAAGGAAGTaGGTAGAACTTGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: MPSWEESALYSSTMTHKPFCKRK*VELVLE
Trigger: CTCAAGGACAAGTTCTACTCACTTCCTTTTACAGAA...GGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR GCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTCTACACTCCATGGCCTaGTGCACATGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTLHSMA*CTCDRT
Trigger: TGTCCTGTCACATGTGCAGCAGGCCATGGAGTGTAG...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GTCAGCTTGACACAGGCATCAATCACCCCCTGGATCTCAGCAGTAATTGTGGAGTTTGCGTTGCCTGACTaGAACACAATCAGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VSLTQASITPWISAVIVEFALPD*NTISVL
Trigger: AAGAACACTGATTGTGTTGCAGTCAGGCAACGCAAA...CTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp GTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCAAGGCCCTCAGACGGTTaGATCTCTCTGGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VLNHHRYGFHIHVHTRIPRPSDG*ISLVPV
Trigger: GACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCT...TGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCGACTATGGATCATGGTaGCGATTGTCAGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELDYGSW*RLSVTE
Trigger: TTCTGTCACTGACAATCGCCACCATGATCCATAGTC...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGAGGGATGAAGGAGAGGATGCGCTCAGATTCCCAGCGTTTGAAACGAACACAAAAAGACTATGGATCATaGTGGCGATTGTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: GGMKERMRSDSQRLKRTQKDYGS*WRLSVT
Trigger: TGTCACTGACAATCGCCACCATGATCCATAGTCTTT...TTGTGTTCGTTTCAAACGCTGGGAATCTGAGCGCATCCTCTCCTTCATCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGGGTTTTCATCTGGTTTaGAAGCTCCAGCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQGFHLV*KLQPED
Trigger: GTCTTCAGGCTGGAGCTTCCAAACCAGATGAAAACC...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTGGGAAGGTTACGATCTaGTACCAGTCCAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTGKVTI*YQSSTD
Trigger: GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp CACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAGCACGTGCGCTGCCATaGCAACAGTGTCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: HRYGFHIHVHTRIPFLIIARALP*QQCPLR
Trigger: GCGGAGGGGACACTGTTGCCATGGCAGCGCACGTGC...TATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp ATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAAGAGCCCAGTCGCCAGGATGTaGCCATTCCGCGAACCGGCG +
Preference number: 4 (lower is better)
Translates to: IRFPHTCTYTDSILNYKSPVARM*PFREPA
Trigger: CGCCGGTTCGCGGAATGGCCACATCCTGGCGACTGG...GCTCTTATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGAAATTGGTGGGAGGAATaGAAAGCTGCCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSRNWWEE*KAALGG
Trigger: ACCCCCAAGGGCAGCTTTCCATTCCTCCCACCAATT...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp GCCTCTCCTGGAATAAAGACGCCAGAGTACTGCGACACCGTTTCATGCCTTCATAAATTGTTACAGGTGTaGCGTAACAATCGACTCGCA +
Preference number: 4 (lower is better)
Translates to: ASPGIKTPEYCDTVSCLHKLLQV*RNNRLA
Trigger: TGCGAGTCGATTGTTACGCCACACCTGTAACAATTT...ATGAAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTTTATTCCAGGAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR TCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCCAACTACATTGTCTTTaGTCACTGGCTCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELQLHCL*SLALNR
Trigger: TCTGTTCAGAGCCAGTGATCAAAGACAATGTAGTTG...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCTTCCATCAGGAGGGATaGAGGAGAGGATGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFFHQEG*RRGCAQ
Trigger: CTGAGCGCATCCTCTCCTTCATCCCTCCTGATGGAA...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp CTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTCCATCAGGAGGGATaGAGGAGAGGATGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LNHHRYGFHIHVHTRIPFFHQEG*RRGCAQ
Trigger: CTGAGCGCATCCTCTCCTTCATCCCTCCTGATGGAA...GAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGTTCCATCAGGAGGGATaGAGGAGAGGATGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRFHQEG*RRGCAQ
Trigger: CTGAGCGCATCCTCTCCTTCATCCCTCCTGATGGAA...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGCCAGACGATTCACCTTaGGTCCAGAAATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLPDDSP*VQKWPA
Trigger: AGCTGGCCATTTCTGGACTCAAGGTGAATCGTCTGG...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTCTGCACTGCTTATGGTaGTGCTGCAGGAATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTALHCLW*CCRNGG
Trigger: GCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAG...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAAGAGCTGGGGCTCCCGCCTGTaGTCCCAGTACTTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IRFPHTCTYTDSILNYKSWGSRL*SQYLGR
Trigger: CCTCCCTAAGTACTGGGATCACAGGCGGGAGCCCCA...GCTCTTATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp AGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCATCTATGCTTACACCTaGAGGTCCCTTACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: RLRSGTSPALTNGDMSSLIYAYT*RSLTLE
Trigger: TTCTAGGGTAAGGGACCTGCAGGTGTAAGCATAGAT...GAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp TCCATTCTTAATTATAAGAGCTGCTTACTTCTGTGCACTGACATGGTAAGACAGGTTGCATCTCTCTGGTaGCAGTCGCCAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: SILNYKSCLLLCTDMVRQVASLW*QSPGCG
Trigger: GCCACATCCTGGCGACTGGCACCAGAGAGATGCAAC...CTGTCTTACCATGTCAGTGCACAGAAGTAAGCAGCTCTTATAATTAAGAATGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTAAAGACTATGGATCATaGTGGCGATTGTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSKDYGS*WRLSVT
Trigger: TGTCACTGACAATCGCCACCATGATCCATAGTCTTT...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTTCCCCATCGTCTGCTTaGGTCCCACCGTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTSPSSA*VPPLFQ
Trigger: TTGAAATAACGGTGGGACCCAAGCAGACGATGGGGA...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCAAGTCCGATACCATCATaGTCTTTGAGGGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPSPIPS*SLRENL
Trigger: CAGATTTTCCCTCAAAGACCATGATGGTATCGGACT...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGTCCAGCACTGACAAATaGAGATATGAGCTCACTCAC +
Preference number: 4 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQSSTDK*RYELTH
Trigger: GTGAGTGAGCTCATATCTCCATTTGTCAGTGCTGGA...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATCCATGTTTCTTAAACTaGGTTGCTTACACCCATGAT +
Preference number: 4 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDPCFLN*VAYTHD
Trigger: ATCATGGGTGTAAGCAACCCAGTTTAAGAAACATGG...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACAAAAATGACCCACTaGGAAAGAAAGCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELTKMTH*ERKPEV
Trigger: TACCTCAGGCTTTCTTTCCCAGTGGGTCATTTTTGT...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTGCCCGCTACACTCCATaGCCTGCTGCACATGTGACA +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTAARYTP*PAAHVT
Trigger: TGTCACATGTGCAGCAGGCCATGGAGTGTAGCGGGC...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTTTTGATCACTGGCTCTaGACAGACTCCAAAATAATC +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFFDHWL*TDSKII
Trigger: GATTATTTTGGAGTCTGTTCAGAGCCAGTGATCAAA...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TCCATTCTTAATTATAAGAGCTGCTTACTTCTGTGCACTGACATGGTAAGACAGGCATGCCAGTCAGCTTaGCACAGGCATCAATCACCC +
Preference number: 4 (lower is better)
Translates to: SILNYKSCLLLCTDMVRQACQSA*HRHQSP
Trigger: GGGTGATTGATGCCTGTGTCAAGCTGACTGGCATGC...CTGTCTTACCATGTCAGTGCACAGAAGTAAGCAGCTCTTATAATTAAGAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp AATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAGCATGCCAGTCAGCTTaGCACAGGCATCAATCACCC +
Preference number: 4 (lower is better)
Translates to: NHHRYGFHIHVHTRIPFLACQSA*HRHQSP
Trigger: GGGTGATTGATGCCTGTGTCAAGCTGACTGGCATGC...TAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTGTGCTTCCAAGTACTTaGGAATCCACAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTVLPST*ESTGRD
Trigger: ATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCAC...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGAACAGAAGCTGGAATGTaGACCCAGGTAACTCTAGAG +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSRTEAGM*TQVTLE
Trigger: CTCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGT...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR GCA 90 bp ACCCTGGCTGCACTGGGGATTATGGGATCGGCTTCTCTGAAACTCTCTTACTTTTGCTGGATCTTAAACTaGAGGTTAATTGTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TLAALGIMGSASLKLSYFCWILN*RLIVGF
Trigger: AAACCCCACAATTAACCTGCAGTTTAAGATCCAGCA...AAAGTAAGAGAGTTTCAGAGAAGCCGATCCCATAATCCCCAGTGCAGCCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGAAGGTAGAGTCCGACTaGTTTTCTTGCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQKVESD*FSCQSF
Trigger: GAAAGATTGGCAAGAAAAGCAGTCGGACTCTACCTT...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGCACACAAACCCTGGCTaGACTGGGGATTATGGGATC +
Preference number: 4 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRHTNPG*TGDYGI
Trigger: GATCCCATAATCCCCAGTGCAGCCAGGGTTTGTGTG...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp ATGTTTATAGAAAATTGTTACAGGTGTGGCGTAACAATCGACTCGCAGTGCCTTCACACAAACCCTGGCTaGACTGGGGATTATGGGATC +
Preference number: 4 (lower is better)
Translates to: MFIENCYRCGVTIDSQCLHTNPG*TGDYGI
Trigger: GATCCCATAATCCCCAGTGCAGCCAGGGTTTGTGTG...AAGGCACTGCGAGTCGATTGTTACGCCACACCTGTAACAATTTTCTATAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR GCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTCACTCCAGGACAAACTaGGGAGTCACGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTAHSRTN*GVTECG
Trigger: TCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTG...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGCACTCCATGGCCTGCTaGACATGTGACAGGACAGTT +
Preference number: 4 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRHSMAC*TCDRTV
Trigger: AACTGTCCTGTCACATGTGCAGCAGGCCATGGAGTG...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGAAAGACTATGGATCATaGTGGCGATTGTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQKDYGS*WRLSVT
Trigger: TGTCACTGACAATCGCCACCATGATCCATAGTCTTT...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTATCAAGAAAAGACTATaGATCATGGTGGCGATTGTC +
Preference number: 4 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSIKKRL*IMVAIV
Trigger: GACAATCGCCACCATGATCCATAGTCTTTTCTTGAT...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCCCATGTTTCTTAAACTaGGTTGCTTACACCCATGAT +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELPCFLN*VAYTHD
Trigger: ATCATGGGTGTAAGCAACCCAGTTTAAGAAACATGG...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGACAAAAATGACCCACTaGGAAAGAAAGCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQTKMTH*ERKPEV
Trigger: TACCTCAGGCTTTCTTTCCCAGTGGGTCATTTTTGT...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp CACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATATCCCTACTCCTCACCTaGCCTTGCTGCTCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: HRYGFHIHVHTRIPFLIISLLLT*PCCSQR
Trigger: GCGCTGAGAGCAGCAAGGCCAGGTGAGGAGTAGGGA...TATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACCAGATTCCCAGCGTTTaGAACGAACACAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYQIPSV*NEHKDG
Trigger: TCCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTG...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp GGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCTTCTGTAAAAGGAAGTaGGTAGAACTGTTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GKVTIWYQSSTDKWRYELFCKRK*VELFWV
Trigger: AACCCAAAACAGTTCTACTCACTTCCTTTTACAGAA...GAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGAATGTTTTGCGTTGCCTaGCTGCAACACAATCAGTGT +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSRMFCVA*LQHNQC
Trigger: ACACTGATTGTGTTGCAGTCAGGCAACGCAAAACAT...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp AAAACCATTGTCAAGCATCTCTTCCAATACCTCATAAACCACAACTACATTGTCGTGGCTGGTGCGGACTaGGGTGTGCTGTTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: KTIVKHLFQYLINHNYIVVAGAD*GVLLSV
Trigger: TACACTTAACAGCACACCTCAGTCCGCACCAGCCAC...GACAATGTAGTTGTGGTTTATGAGGTATTGGAAGAGATGCTTGACAATGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTTGCAACCAGATTCTGTaGACTGACATGGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTCNQIL*TDMVRQ
Trigger: CTGTCTTACCATGTCAGTGCACAGAATCTGGTTGCA...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGACCTCATGTTTTGCGTTaGCTGACTGCAACACAATCA +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSRPHVLR*LTATQS
Trigger: TGATTGTGTTGCAGTCAGGCAACGCAAAACATGAGG...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACGCATCAATCACCCCCTaGATCTCAGCAGTAATTGTG +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYASITP*ISAVIV
Trigger: CACAATTACTGCTGAGATCCAGGGGGTGATTGATGC...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CCA 90 bp GAGATGTTTATAGAAAATTGTTACAGGTGTGGCGTAACAATCGACTCGCAGTGCCTTCAGGTTCGAACTTaGAACTTCCCAGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: EMFIENCYRCGVTIDSQCLQVRT*NFPALV
Trigger: GACCAAAGCTGGGAAGTTCCAAGTTCGAACCTGAAG...GCACTGCGAGTCGATTGTTACGCCACACCTGTAACAATTTTCTATAAACATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR CCA 90 bp AGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCCCATGTTTCTTAAACTaGGTTGCTTACACCCATGAT +
Preference number: 4 (lower is better)
Translates to: RLRSGTSPALTNGDMSSLPCFLN*VAYTHD
Trigger: ATCATGGGTGTAAGCAACCCAGTTTAAGAAACATGG...GAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp AGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCAGTGTGGAACACATCTaGTTGTGTACAGTACACTAT +
Preference number: 4 (lower is better)
Translates to: RLRSGTSPALTNGDMSSLSVEHI*LCTVHY
Trigger: ATAGTGTACTGTACACAACCAGATGTGTTCCACACT...GAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGCGGAGTCACGGAGTGTaGAACACATCTGGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRRSHGV*NTSGCV
Trigger: TACACAACCAGATGTGTTCCACACTCCGTGACTCCG...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGCTTCCCTTTCCATGGTaGATGTGTATGTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLLPFPW*MCMSLQ
Trigger: CTGGAGTGACATACACATCCACCATGGAAAGGGAAG...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGACAACTACATTGTCTTTaGTCACTGGCTCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSRQLHCL*SLALNR
Trigger: TCTGTTCAGAGCCAGTGATCAAAGACAATGTAGTTG...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp CTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCCAGATTCCCAGCGTTTaGAACGAACACAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LNHHRYGFHIHVHTRIPFQIPSV*NEHKDG
Trigger: TCCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTG...GAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp AGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCTTCTGTAAAAGGAAGTaGGTAGAACTGTTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: RLRSGTSPALTNGDMSSLFCKRK*VELFWV
Trigger: AACCCAAAACAGTTCTACTCACTTCCTTTTACAGAA...GAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTCTGGGAAAGAAAGCCTaGGGTATCCCTTTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTALGKKA*GIPLVA
Trigger: GGCAACTAAAGGGATACCTCAGGCTTTCTTTCCCAG...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACGGTAACTCTAGAGCCTaGGTTCTTAATCACCACAGA +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYGNSRA*VLNHHR
Trigger: TCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTACC...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp GAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGTAACTCTAGAGCCTaGGTTCTTAATCACCACAGA +
Preference number: 4 (lower is better)
Translates to: EPEFLITTDTVSTYMYIHGNSRA*VLNHHR
Trigger: TCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTACC...GTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp GTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCAACAGAAGCTGGAATGTaGACCCAGGTAACTCTAGAG +
Preference number: 4 (lower is better)
Translates to: VLNHHRYGFHIHVHTRIPTEAGM*TQVTLE
Trigger: CTCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGT...TGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp GTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCAGGCCGGTATGTTGCATaGGAACTGAAATTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: VLNHHRYGFHIHVHTRIPGRYVA*ELKFQN
Trigger: GTTCTGGAATTTCAGTTCTCATGCAACATACCGGCC...TGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACCGACTCGGTAGCCAATaGAAAACCATTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYRLGSQ*KTIVKH
Trigger: ATGCTTGACAATGGTTTTCCATTGGCTACCGAGTCG...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CCA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGGCATCAATCACCCCCTaGATCTCAGCAGTAATTGTG +
Preference number: 4 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRASITP*ISAVIV
Trigger: CACAATTACTGCTGAGATCCAGGGGGTGATTGATGC...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGTCCAGCACTGACAAATaGAGATATGAGCTCACTCAC +
Preference number: 4 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLSSTDK*RYELTH
Trigger: GTGAGTGAGCTCATATCTCCATTTGTCAGTGCTGGA...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTACAAAAATGACCCACTaGGAAAGAAAGCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTTKMTH*ERKPEV
Trigger: TACCTCAGGCTTTCTTTCCCAGTGGGTCATTTTTGT...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTCATGTTAAACACACATaGAACCAAACAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTHVKHT*NQTARW
Trigger: CCATCGAGCTGTTTGGTTCCATGTGTGTTTAACATG...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGCACAAACAGAACGGCTaGCCACACTTTTCCAATGTT +
Preference number: 4 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRHKQNG*PHFSNV
Trigger: AACATTGGAAAAGTGTGGTCAGCCGTTCTGTTTGTG...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp GAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACCAACTACATTGTCTTTaGTCACTGGCTCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: EPEFLITTDTVSTYMYIHQLHCL*SLALNR
Trigger: TCTGTTCAGAGCCAGTGATCAAAGACAATGTAGTTG...GTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp TCCATTCTTAATTATAAGAGCTGCTTACTTCTGTGCACTGACATGGTAAGACAGCAGATTCCCAGCGTTTaGAACGAACACAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SILNYKSCLLLCTDMVRQQIPSV*NEHKDG
Trigger: TCCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTG...CTGTCTTACCATGTCAGTGCACAGAAGTAAGCAGCTCTTATAATTAAGAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTCAGATTCCCAGCGTTTaGAACGAACACAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTAQIPSV*NEHKDG
Trigger: TCCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTG...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTGTGCTTCCAAGTACTTaGGAATCCACAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTAVLPST*ESTGRD
Trigger: ATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCAC...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR TCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACACAATCAGTGTTCTTTaGAGAGGGCTTCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYTISVL*RGLPRT
Trigger: TGTTCTTGGAAGCCCTCTTCAAAGAACACTGATTGT...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp ATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAAGAGCTTGAAAGGTGGCTGGTaGGGACTGAGGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IRFPHTCTYTDSILNYKSLKGGW*GLRCAV
Trigger: AACAGCACACCTCAGTCCGCACCAGCCACCTTTCAA...GCTCTTATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACAAAGACTATGGATCATaGTGGCGATTGTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYKDYGS*WRLSVT
Trigger: TGTCACTGACAATCGCCACCATGATCCATAGTCTTT...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CCA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTATCAAGAAAAGACTATaGATCATGGTGGCGATTGTC +
Preference number: 4 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTIKKRL*IMVAIV
Trigger: GACAATCGCCACCATGATCCATAGTCTTTTCTTGAT...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp GGTTACCCAATTAGTAACCACAGAAGCTGGAATGTGAACCCAGGTAACTCTAGAATCAAGAAAAGACTATaGATCATGGTGGCGATTGTC +
Preference number: 4 (lower is better)
Translates to: GYPISNHRSWNVNPGNSRIKKRL*IMVAIV
Trigger: GACAATCGCCACCATGATCCATAGTCTTTTCTTGAT...TCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGTGGTTACTAATTGGGTAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CCA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCGACTCGGTAGCCAATaGAAAACCATTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFRLGSQ*KTIVKH
Trigger: ATGCTTGACAATGGTTTTCCATTGGCTACCGAGTCG...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CCA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGCATGTTAAACACACATaGAACCAAACAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLHVKHT*NQTARW
Trigger: CCATCGAGCTGTTTGGTTCCATGTGTGTTTAACATG...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp AAAACCATTGTCAAGCATCTCTTCCAATACCTCATAAACCACAACTACATTGTCTCTGCCCACCAGAATTaGTGGGAGGAATGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KTIVKHLFQYLINHNYIVSAHQN*WEEWKA
Trigger: AGCTTTCCATTCCTCCCACCAATTCTGGTGGGCAGA...GACAATGTAGTTGTGGTTTATGAGGTATTGGAAGAGATGCTTGACAATGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp CTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCCAACTACATTGTCTTTaGTCACTGGCTCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: LNHHRYGFHIHVHTRIPFQLHCL*SLALNR
Trigger: TCTGTTCAGAGCCAGTGATCAAAGACAATGTAGTTG...GAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGCTTAGGTACTTCCCTTaGAACAGGATGAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRLRYFP*NRMSSR
Trigger: TCTAGAACTCATCCTGTTTCAAGGGAAGTACCTAAG...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp GTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTTGCTTTCTATTTCTaGCCACCAGAATTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VLNHHRYGFHIHVHTRIPFAFYF*PPELVG
Trigger: TCCCACCAATTCTGGTGGGCAGAAATAGAAAGCAAA...TGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CCA 90 bp AATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAGACTATGGATCATGGTaGCGATTGTCAGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: NHHRYGFHIHVHTRIPFLDYGSW*RLSVTE
Trigger: TTCTGTCACTGACAATCGCCACCATGATCCATAGTC...TAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CCA 90 bp AATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTACGACTCGGTAGCCAATaGAAAACCATTGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: NHHRYGFHIHVHTRIPFLRLGSQ*KTIVKH
Trigger: ATGCTTGACAATGGTTTTCCATTGGCTACCGAGTCG...TAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTTCCAGCACTGACAAATaGAGATATGAGCTCACTCAC +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTASSTDK*RYELTH
Trigger: GTGAGTGAGCTCATATCTCCATTTGTCAGTGCTGGA...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CCA 90 bp AATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATGGAAAGCTGCCCTTaGGGGTCTTTATTCATCCAA +
Preference number: 4 (lower is better)
Translates to: NHHRYGFHIHVHTRIPFLMESCP*GSLFIQ
Trigger: TTGGATGAATAAAGACCCCCAAGGGCAGCTTTCCAT...TAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp GTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTTGATCACTGGCTCTaGACAGACTCCAAAATAATC +
Preference number: 4 (lower is better)
Translates to: VLNHHRYGFHIHVHTRIPFDHWL*TDSKII
Trigger: GATTATTTTGGAGTCTGTTCAGAGCCAGTGATCAAA...TGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCTTTGATCACTGGCTCTaGACAGACTCCAAAATAATC +
Preference number: 4 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFFDHWL*TDSKII
Trigger: GATTATTTTGGAGTCTGTTCAGAGCCAGTGATCAAA...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp ATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAAGAGCACAGAAGCTGGAATGTaGACCCAGGTAACTCTAGAG +
Preference number: 4 (lower is better)
Translates to: IRFPHTCTYTDSILNYKSTEAGM*TQVTLE
Trigger: CTCTAGAGTTACCTGGGTTCACATTCCAGCTTCTGT...GCTCTTATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp GTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCAGACACACGACAAATCTaGAAGGCTTTGCATGAAAAA +
Preference number: 4 (lower is better)
Translates to: VLNHHRYGFHIHVHTRIPDTRQI*KALHEK
Trigger: TTTTTCATGCAAAGCCTTTCAGATTTGTCGTGTGTC...TGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR GCA 90 bp GTAACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGCTTAATTATAAGAGCTaGTTACTTCTGTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: VTLEPEFLITTDTVSTYMLNYKS*LLLCTD
Trigger: GTCAGTGCACAGAAGTAAGCAGCTCTTATAATTAAG...CATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp CACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAGGTAACTCTAGAGCCTaGGTTCTTAATCACCACAGA +
Preference number: 4 (lower is better)
Translates to: HRYGFHIHVHTRIPFLIIGNSRA*VLNHHR
Trigger: TCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTACC...TATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR TCA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTTCCCTTGAAACAGGATaGGTTCTAGAGGAAATAAAA +
Preference number: 4 (lower is better)
Translates to: LNREATSAHVKHTWNQTASLETG*VLEEIK
Trigger: TTTTATTTCCTCTAGAACTCATCCTGTTTCAAGGGA...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR GCA 90 bp AATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTACATATGTGGTTTaGTTTCTATTTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: NHHRYGFHIHVHTRIPFLITYVV*FLFLPT
Trigger: GGTGGGCAGAAATAGAAAGCAAACCACATATGTAAT...TAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR TCA 90 bp CACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATATTTGATCACTGGCTCTaGACAGACTCCAAAATAATC +
Preference number: 4 (lower is better)
Translates to: HRYGFHIHVHTRIPFLIIFDHWL*TDSKII
Trigger: GATTATTTTGGAGTCTGTTCAGAGCCAGTGATCAAA...TATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CCA 90 bp ATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAAGAGCATCAAGAAAAGACTATaGATCATGGTGGCGATTGTC +
Preference number: 4 (lower is better)
Translates to: IRFPHTCTYTDSILNYKSIKKRL*IMVAIV
Trigger: GACAATCGCCACCATGATCCATAGTCTTTTCTTGAT...GCTCTTATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517922.5
CDS-3UTR GCA 90 bp CACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATACTTAATTATAAGAGCTaGTTACTTCTGTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: HRYGFHIHVHTRIPFLIILNYKS*LLLCTD
Trigger: GTCAGTGCACAGAAGTAAGCAGCTCTTATAATTAAG...TATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS GCA 90 bp CCCTCTCCAGGCTCGGGGTCGTCCCTACTCCTCACCTGGCCTTGCTaGTCTCAGCGCCCACTGCTCCTAGGCGCGGACAGGCCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: PSPGSGSSLLLTWPC*SQRPLLLGADRPRP
Trigger: GGGGCGGGGCCTGTCCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGTGAGGAGTAGGGACGACCCCGAGCCTGGAGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 90 bp TGGTGCCAGTCGCCAGGATGTGGCCATTCCGCGAACCGGCGCGGGTaGTCAAAACGCAGAGGCCTGCGGTGCCCAGCGCCGCCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: WCQSPGCGHSANRRG*SKRRGLRCPAPPGG
Trigger: TCCTCCAGGCGGCGCTGGGCACCGCAGGCCTCTGCGTTTTGACCACCCGCGCCGGTTCGCGGAATGGCCACATCCTGGCGACTGGCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 90 bp ACTCCTGCCCCCTCTCCAGGCTCGGGGTCGTCCCTACTCCTCACCTaGCCTTGCTGCTCTCAGCGCCCACTGCTCCTAGGCGCGGACAGG +
Preference number: 5 (lower is better)
Translates to: TPAPSPGSGSSLLLT*PCCSQRPLLLGADR
Trigger: CCTGTCCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGTGAGGAGTAGGGACGACCCCGAGCCTGGAGAGGGGGCAGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS GCA 90 bp GGGGGACAGACACCCCAAGGCCCTCAGACGGTTGCATCTCTCTGGTaGCAGTCGCCAGGATGTGGCCATTCCGCGAACCGGCGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: GGQTPQGPQTVASLW*QSPGCGHSANRRGW
Trigger: CCACCCGCGCCGGTTCGCGGAATGGCCACATCCTGGCGACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCTTGGGGTGTCTGTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 90 bp CCTGGGGGACAGACACCCCAAGGCCCTCAGACGGTTGCATCTCTCTaGTGCCAGTCGCCAGGATGTGGCCATTCCGCGAACCGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: PGGQTPQGPQTVASL*CQSPGCGHSANRRG
Trigger: CCCGCGCCGGTTCGCGGAATGGCCACATCCTGGCGACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCTTGGGGTGTCTGTCCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS GCA 90 bp GCGATATTCAGTTCCATTCAACCAAAAGGCCCTCCCTGGCCTTGCTaGTCTCAGCGCCCACTGCTCCTAGGCGCGGACAGGCCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: AIFSSIQPKGPPWPC*SQRPLLLGADRPRP
Trigger: GGGGCGGGGCCTGTCCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGGAGGGCCTTTTGGTTGAATGGAACTGAATATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000174653.3
CDS CCA 90 bp AGGCCCTCAGACGGTTGCATCTCTCTGGTGCCAGTCGCCAGGATGTaGCCATTCCGCGAACCGGCGCGGGTGGTCAAAACGCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RPSDGCISLVPVARM*PFREPARVVKTQRP
Trigger: AGGCCTCTGCGTTTTGACCACCCGCGCCGGTTCGCGGAATGGCCACATCCTGGCGACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 90 bp AGGCCCAATCTTCCCCTCCTGCATGAGCCTGAAGATAGCCCTCCCTaGCCTTGCTGCTCTCAGCGCCCACTGCTCCTAGGCGCGGACAGG +
Preference number: 5 (lower is better)
Translates to: RPNLPLLHEPEDSPP*PCCSQRPLLLGADR
Trigger: CCTGTCCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGGAGGGCTATCTTCAGGCTCATGCAGGAGGGGAAGATTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518421.5
CDS GCA 90 bp GCAGCGATATTCAGTTCCATTCAACCAAAAGGCCCTCCCTGGCCTTaGTGCTCTCAGCGCCCACTGCTCCTAGGCGCGGACAGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: AAIFSSIQPKGPPWP*CSQRPLLLGADRPR
Trigger: GCGGGGCCTGTCCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGGAGGGCCTTTTGGTTGAATGGAACTGAATATCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000174653.3
CDS-3UTR CAA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGGGCATGCCAGTCAGCTaGACACAGGCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMGMPVS*TQASIT
Trigger: GGTGATTGATGCCTGTGTCAAGCTGACTGGCATGCC...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp AGACACCCTGCACTGCTTATGGTGATGCTGCAGGAATGGCGGCAGCGATGCCCGGGCATGCCAGTCAGCTaGACACAGGCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: RHPALLMVMLQEWRQRCPGMPVS*TQASIT
Trigger: GGTGATTGATGCCTGTGTCAAGCTGACTGGCATGCC...CGGGCATCGCTGCCGCCATTCCTGCAGCATCACCATAAGCAGTGCAGGGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS CCA 90 bp ACAAAAGCAGCGATATTCAGTTCCATTCAACCAAAAGGCCCTCCCTaGCCTTGCTGCTCTCAGCGCCCACTGCTCCTAGGCGCGGACAGG +
Preference number: 5 (lower is better)
Translates to: TKAAIFSSIQPKGPP*PCCSQRPLLLGADR
Trigger: CCTGTCCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGGAGGGCCTTTTGGTTGAATGGAACTGAATATCGCTGCTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000174653.3
CDS-3UTR CAA 90 bp ATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGCATTCCCCATCGTCTGCTaGGGTCCCACCGTTATTTCA +
Preference number: 5 (lower is better)
Translates to: MGRVGPLLQYDDTQTLAAFPIVC*GPTVIS
Trigger: TGAAATAACGGTGGGACCCAAGCAGACGATGGGGAA...TGCAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGTTCCCCATCGTCTGCTaGGGTCCCACCGTTATTTCA +
Preference number: 5 (lower is better)
Translates to: SWEESALYSSTMTHKPWLFPIVC*GPTVIS
Trigger: TGAAATAACGGTGGGACCCAAGCAGACGATGGGGAA...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp GCTGCAGGAATGGCGGCAGCGATGCCCGCTACACTCCATGGCCTGCTGCACATGTTAAGTGGCCTTTCCTaGACTGACATTCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: AAGMAAAMPATLHGLLHMLSGLS*TDIHFL
Trigger: AAGAAAATGAATGTCAGTCAAGGAAAGGCCACTTAA...CATGTGCAGCAGGCCATGGAGTGTAGCGGGCATCGCTGCCGCCATTCCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp GCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACATCAGATTCCCAGCGTTaGAAACGAACACAAGGATGG +
Preference number: 5 (lower is better)
Translates to: AVLTFMGRVGPLLQYDDTSDSQR*KRTQGW
Trigger: CCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTGA...TGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATTTCCCCATCGTCTGCTaGGGTCCCACCGTTATTTCA +
Preference number: 5 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDFPIVC*GPTVIS
Trigger: TGAAATAACGGTGGGACCCAAGCAGACGATGGGGAA...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATTCCAGACGATTCACCTaGAGTCCAGAAATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDSRRFT*SPEMAS
Trigger: GCTGGCCATTTCTGGACTCAAGGTGAATCGTCTGGA...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp CAGGTGTGGCGTAACAATCGACTCGCAGTGCCTTATCTTGTAAGAAGCCTCTCCTCCAGACGATTCACCTaGAGTCCAGAAATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: QVWRNNRLAVPYLVRSLSSRRFT*SPEMAS
Trigger: GCTGGCCATTTCTGGACTCAAGGTGAATCGTCTGGA...GGAGAGGCTTCTTACAAGATAAGGCACTGCGAGTCGATTGTTACGCCACACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR CAA 90 bp TCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGACACACAAACCCTGGCTGGTGGAACACATCTGGTaGTGTACAGTACACTATCCC +
Preference number: 5 (lower is better)
Translates to: SWEESALYSSTMTHKPWLVEHIW*CTVHYP
Trigger: GGGATAGTGTACTGTACACAACCAGATGTGTTCCAC...CAGCCAGGGTTTGTGTGTCATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCATTTTCAACTCTGGCCTaGCTGCTCTCAGCGCCCACT +
Preference number: 5 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPFSTLA*LLSAPT
Trigger: AGTGGGCGCTGAGAGCAGCAAGGCCAGAGTTGAAAA...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396926.8
CDS-3UTR CAA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACGGATCATGGTGGCGATaGTCAGTGACAGAAGAAAGC +
Preference number: 5 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDGSWWR*SVTEES
Trigger: GCTTTCTTCTGTCACTGACAATCGCCACCATGATCC...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATGGATCATGGTGGCGATaGTCAGTGACAGAAGAAAGC +
Preference number: 5 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDGSWWR*SVTEES
Trigger: GCTTTCTTCTGTCACTGACAATCGCCACCATGATCC...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp AGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATATGAGCTCACTCGGCATGCCAGTCAGCTaGACACAGGCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: RLRSGTSPALTNGDMSSLGMPVS*TQASIT
Trigger: GGTGATTGATGCCTGTGTCAAGCTGACTGGCATGCC...GAGTGAGCTCATATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp CAGCTTGACACAGGCATCAATCACCCCCTGGATCTCAGCAGTAATTGTGGAGCCTCAGATTCCCAGCGTTaGAAACGAACACAAGGATGG +
Preference number: 5 (lower is better)
Translates to: QLDTGINHPLDLSSNCGASDSQR*KRTQGW
Trigger: CCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTGA...GGCTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTTCCAGACGATTCACCTaGAGTCCAGAAATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSSRRFT*SPEMAS
Trigger: GCTGGCCATTTCTGGACTCAAGGTGAATCGTCTGGA...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp GAAAAGTTTCCGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACGGTGCTTCCAAGTACTaGAGAATCCACAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: EKFPTNGKVTIWYQSSTDGASKY*RIHRQR
Trigger: TCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACC...GTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCGGAAACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGGCCAATGGAAAACCATaGTCAAGCATCTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: SQLCSPSWEESALYSSTMANGKP*SSISSN
Trigger: ATTGGAAGAGATGCTTGACAATGGTTTTCCATTGGC...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATGTGGAACACATCTGGTaGTGTACAGTACACTATCCC +
Preference number: 5 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDVEHIW*CTVHYP
Trigger: GGGATAGTGTACTGTACACAACCAGATGTGTTCCAC...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGGGATCATGGTGGCGATaGTCAGTGACAGAAGAAAGC +
Preference number: 5 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQGSWWR*SVTEES
Trigger: GCTTTCTTCTGTCACTGACAATCGCCACCATGATCC...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp ATGTGTATGTCACTCCAGGACAAACTGCGGAGTCACGGAGTGTGGAACACATCTTCAGATTCCCAGCGTTaGAAACGAACACAAGGATGG +
Preference number: 5 (lower is better)
Translates to: MCMSLQDKLRSHGVWNTSSDSQR*KRTQGW
Trigger: CCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTGA...AGATGTGTTCCACACTCCGTGACTCCGCAGTTTGTCCTGGAGTGACATACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TCACAGCTGTGCTCACCTTCATGGGAAGAGTCGGCCCTCTACTCCAGTACGATGGTCCGACTGCTTTTCTaGCCAATCTTTCATTTAAGT +
Preference number: 5 (lower is better)
Translates to: SQLCSPSWEESALYSSTMVRLLF*PIFHLS
Trigger: ACTTAAATGAAAGATTGGCAAGAAAAGCAGTCGGAC...CATCGTACTGGAGTAGAGGGCCGACTCTTCCCATGAAGGTGAGCACAGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TCAAGGATCAACCACACCCTCGATGGTAAGCTTTCTCTTTTTCTAGGGCGACAGGGTGCTTCCAAGTACTaGAGAATCCACAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: SRINHTLDGKLSLFLGRQGASKY*RIHRQR
Trigger: TCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACC...CTGTCGCCCTAGAAAAAGAGAAAGCTTACCATCGAGGGTGTGGTTGATCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS GCA 90 bp GCTTTCTATTTCTGCCCACCAGAATTGGTGGGAGGAATGGAAAGCTaGCCTTGGGGGTCTTTATTCATCCAATCAGAGCTATTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: AFYFCPPELVGGMES*PWGSLFIQSELFSE
Trigger: CTCAGAGAATAGCTCTGATTGGATGAATAAAGACCCCCAAGGGCAGCTTTCCATTCCTCCCACCAATTCTGGTGGGCAGAAATAGAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp CGACCAACGGGAAGGTTACGATCTGGTACCAGTCCAGCACTGACAAATGGAGATGCCAATGGAAAACCATaGTCAAGCATCTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: RPTGRLRSGTSPALTNGDANGKP*SSISSN
Trigger: ATTGGAAGAGATGCTTGACAATGGTTTTCCATTGGC...ATCTCCATTTGTCAGTGCTGGACTGGTACCAGATCGTAACCTTCCCGTTGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCAAGGCCCTCAGACGGTaGCATCTCTCTGGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFKALRR*HLSGAS
Trigger: ACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCTT...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 90 bp TGTGGTTTGCTTTCTATTTCTGCCCACCAGAATTGGTGGGAGGAATaGAAAGCTGCCCTTGGGGGTCTTTATTCATCCAATCAGAGCTAT +
Preference number: 5 (lower is better)
Translates to: CGLLSISAHQNWWEE*KAALGGLYSSNQSY
Trigger: ATAGCTCTGATTGGATGAATAAAGACCCCCAAGGGCAGCTTTCCATTCCTCCCACCAATTCTGGTGGGCAGAAATAGAAAGCAAACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp CTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCGCCGTGCCTCATGTTTaGCGTTGCCTGACTGCAACA +
Preference number: 5 (lower is better)
Translates to: LNHHRYGFHIHVHTRIPFAVPHV*RCLTAT
Trigger: TGTTGCAGTCAGGCAACGCAAAACATGAGGCACGGC...GAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp GTAACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGGGATCATGGTGGCGATaGTCAGTGACAGAAGAAAGC +
Preference number: 5 (lower is better)
Translates to: VTLEPEFLITTDTVSTYMGSWWR*SVTEES
Trigger: GCTTTCTTCTGTCACTGACAATCGCCACCATGATCC...CATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CAA 90 bp AGCAAAAACTTTGCACAATATTTAGAGAAAAGCTCTAGGGTGTGGAGAGTACGGTCCAGACGATTCACCTaGAGTCCAGAAATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SKNFAQYLEKSSRVWRVRSRRFT*SPEMAS
Trigger: GCTGGCCATTTCTGGACTCAAGGTGAATCGTCTGGA...CCGTACTCTCCACACCCTAGAGCTTTTCTCTAAATATTGTGCAAAGTTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp GAGAGGTGCTTCCAAGTACTTGAGAATCCACAGGCAGAGATGCTTCCCTTTCCAATACCATCATGGTCTTaGAGGGAAAATCTGATTCCA +
Preference number: 5 (lower is better)
Translates to: ERCFQVLENPQAEMLPFPIPSWS*RENLIP
Trigger: TGGAATCAGATTTTCCCTCAAAGACCATGATGGTAT...TGGAAAGGGAAGCATCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGGGTGCTTCCAAGTACTaGAGAATCCACAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLGASKY*RIHRQR
Trigger: TCTCTGCCTGTGGATTCTCAAGTACTTGGAAGCACC...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp GTAACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGGCCTCATGTTTTGCGTaGCCTGACTGCAACACAATC +
Preference number: 5 (lower is better)
Translates to: VTLEPEFLITTDTVSTYMASCFA*PDCNTI
Trigger: GATTGTGTTGCAGTCAGGCAACGCAAAACATGAGGC...CATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp CTCTCCTGGAATAAAGACGCCAGAGTACTGCGACACCGTTTCATGCCTTCATGGGATGTTTATAGAAAATaGTTACAGGTGTGGCGTAAC +
Preference number: 5 (lower is better)
Translates to: LSWNKDARVLRHRFMPSWDVYRK*LQVWRN
Trigger: GTTACGCCACACCTGTAACAATTTTCTATAAACATC...CCATGAAGGCATGAAACGGTGTCGCAGTACTCTGGCGTCTTTATTCCAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520689.1
CDS-3UTR CAA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCGGATCATGGTGGCGATaGTCAGTGACAGAAGAAAGC +
Preference number: 5 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFGSWWR*SVTEES
Trigger: GCTTTCTTCTGTCACTGACAATCGCCACCATGATCC...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CAA 90 bp AAAACCATTGTCAAGCATCTCTTCCAATACCTCATAAACCACAACTACATTGTCGGCATGCCAGTCAGCTaGACACAGGCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: KTIVKHLFQYLINHNYIVGMPVS*TQASIT
Trigger: GGTGATTGATGCCTGTGTCAAGCTGACTGGCATGCC...GACAATGTAGTTGTGGTTTATGAGGTATTGGAAGAGATGCTTGACAATGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp CACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAGGCATGCCAGTCAGCTaGACACAGGCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: HRYGFHIHVHTRIPFLIIGMPVS*TQASIT
Trigger: GGTGATTGATGCCTGTGTCAAGCTGACTGGCATGCC...TATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CAA 90 bp ATACGGTTTCCACATACATGTACATACACGGATTCCATTCTTAATTATAAGAGCGGCATGCCAGTCAGCTaGACACAGGCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: IRFPHTCTYTDSILNYKSGMPVS*TQASIT
Trigger: GGTGATTGATGCCTGTGTCAAGCTGACTGGCATGCC...GCTCTTATAATTAAGAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CAA 90 bp GAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCTCAGATTCCCAGCGTTaGAAACGAACACAAGGATGG +
Preference number: 5 (lower is better)
Translates to: EFLITTDTVSTYMYIHGFSDSQR*KRTQGW
Trigger: CCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTGA...GAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CAA 90 bp CTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCATTCTCAGATTCCCAGCGTTaGAAACGAACACAAGGATGG +
Preference number: 5 (lower is better)
Translates to: LNHHRYGFHIHVHTRIPFSDSQR*KRTQGW
Trigger: CCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTGA...GAATGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CAA 90 bp ACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGTACCACAATCAGTGTTCTTaGAAGAGGGCTTCCAAGAAC +
Preference number: 5 (lower is better)
Translates to: TLEPEFLITTDTVSTYMYHNQCS*KRASKN
Trigger: GTTCTTGGAAGCCCTCTTCAAAGAACACTGATTGTG...GTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp GTAACTCTAGAGCCTGAGTTCTTAATCACCACAGATACGGTTTCCACATACATGGCCAATGGAAAACCATaGTCAAGCATCTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: VTLEPEFLITTDTVSTYMANGKP*SSISSN
Trigger: ATTGGAAGAGATGCTTGACAATGGTTTTCCATTGGC...CATGTATGTGGAAACCGTATCTGTGGTGATTAAGAACTCAGGCTCTAGAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CAA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTTCAGATTCCCAGCGTTaGAAACGAACACAAGGATGG +
Preference number: 5 (lower is better)
Translates to: LNREATSAHVKHTWNQTASDSQR*KRTQGW
Trigger: CCATCCTTGTGTTCGTTTCAAACGCTGGGAATCTGA...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTGTGGAACACATCTGGTaGTGTACAGTACACTATCCC +
Preference number: 5 (lower is better)
Translates to: LNREATSAHVKHTWNQTAVEHIW*CTVHYP
Trigger: GGGATAGTGTACTGTACACAACCAGATGTGTTCCAC...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp ATTGTCAAGCATCTCTTCCAATACCTCATAAACCACAACTACATTGTCTTTGATTTCTGCCCACCAGAATaGGTGGGAGGAATGGAAAGC +
Preference number: 5 (lower is better)
Translates to: IVKHLFQYLINHNYIVFDFCPPE*VGGMES
Trigger: GCTTTCCATTCCTCCCACCAATTCTGGTGGGCAGAA...ATCAAAGACAATGTAGTTGTGGTTTATGAGGTATTGGAAGAGATGCTTGACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp GTTCTTAATCACCACAGATACGGTTTCCACATACATGTACATACACGGATTCCAGCCAATGGAAAACCATaGTCAAGCATCTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: VLNHHRYGFHIHVHTRIPANGKP*SSISSN
Trigger: ATTGGAAGAGATGCTTGACAATGGTTTTCCATTGGC...TGGAATCCGTGTATGTACATGTATGTGGAAACCGTATCTGTGGTGATTAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517499.5
ENST00000517865.5
ENST00000517922.5
CDS-3UTR CAA 90 bp TTAAACTGGGTTGCTTACACCCATGATCAACACAGTCCATCTTCCTACAGCACTTTAAGTGGCCTTTCCTaGACTGACATTCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: LNWVAYTHDQHSPSSYSTLSGLS*TDIHFL
Trigger: AAGAAAATGAATGTCAGTCAAGGAAAGGCCACTTAA...AGTGCTGTAGGAAGATGGACTGTGTTGATCATGGGTGTAAGCAACCCAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TGGTTGTGTACAGTACACTATCCCAGAGGAAAATCACAAAGCAACACAACTCTGGTCCGACTGCTTTTCTaGCCAATCTTTCATTTAAGT +
Preference number: 5 (lower is better)
Translates to: WLCTVHYPRGKSQSNTTLVRLLF*PIFHLS
Trigger: ACTTAAATGAAAGATTGGCAAGAAAAGCAGTCGGAC...CAGAGTTGTGTTGCTTTGTGATTTTCCTCTGGGATAGTGTACTGTACACAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp AAAACCATTGTCAAGCATCTCTTCCAATACCTCATAAACCACAACTACATTGTCAATGGAAAGCTGCCCTaGGGGGTCTTTATTCATCCA +
Preference number: 5 (lower is better)
Translates to: KTIVKHLFQYLINHNYIVNGKLP*GVFIHP
Trigger: TGGATGAATAAAGACCCCCAAGGGCAGCTTTCCATT...GACAATGTAGTTGTGGTTTATGAGGTATTGGAAGAGATGCTTGACAATGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTGCCAATGGAAAACCATaGTCAAGCATCTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LNREATSAHVKHTWNQTAANGKP*SSISSN
Trigger: ATTGGAAGAGATGCTTGACAATGGTTTTCCATTGGC...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp AAAACCATTGTCAAGCATCTCTTCCAATACCTCATAAACCACAACTACATTGTCGCCAATGGAAAACCATaGTCAAGCATCTCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: KTIVKHLFQYLINHNYIVANGKP*SSISSN
Trigger: ATTGGAAGAGATGCTTGACAATGGTTTTCCATTGGC...GACAATGTAGTTGTGGTTTATGAGGTATTGGAAGAGATGCTTGACAATGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS-3UTR CAA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTGTCCGACTGCTTTTCTaGCCAATCTTTCATTTAAGT +
Preference number: 5 (lower is better)
Translates to: LNREATSAHVKHTWNQTAVRLLF*PIFHLS
Trigger: ACTTAAATGAAAGATTGGCAAGAAAAGCAGTCGGAC...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS-3UTR CAA 90 bp TTAAACAGAGAAGCTACTTCTGCACATGTTAAACACACATGGAACCAAACAGCTATACCATCATGGTCTTaGAGGGAAAATCTGATTCCA +
Preference number: 5 (lower is better)
Translates to: LNREATSAHVKHTWNQTAIPSWS*RENLIP
Trigger: TGGAATCAGATTTTCCCTCAAAGACCATGATGGTAT...AGCTGTTTGGTTCCATGTGTGTTTAACATGTGCAGAAGTAGCTTCTCTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
CDS TCA 90 bp CACCTCCCTAGAAGTTTCTATGCTCCCACTATTCATGCACTCAATTaGAGAATTTTTCAAACAGAAGATGAGGTTTTTCCCAACTTCTAT +
Preference number: 5 (lower is better)
Translates to: HLPRSFYAPTIHALN*RIFQTEDEVFPNFY
Trigger: ATAGAAGTTGGGAAAAACCTCATCTTCTGTTTGAAAAATTCTTCAATTGAGTGCATGAATAGTGGGAGCATAGAAACTTCTAGGGAGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521899.1
CDS TCA 90 bp TTAATTCTCTTGGGAAGGGAAGTTGTTCTAGACGTGGTGCAGATATaGGTACAAGAGAAGGAACTCTTTGACTTGCTTTTTAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: LILLGREVVLDVVQI*VQEKELFDLLFNFY
Trigger: ATAAAAGTTAAAAAGCAAGTCAAAGAGTTCCTTCTCTTGTACTCATATCTGCACCACGTCTAGAACAACTTCCCTTCCCAAGAGAATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523249.1
CDS GCA 90 bp GACTGTCAATCATATACTCCCAGTTATCTTTACTATCGCCCAAATTaGATCCATTTAAAATACTACTTATCTGTGGGTGTCTATTTTCTC +
Preference number: 5 (lower is better)
Translates to: DCQSYTPSYLYYRPN*IHLKYYLSVGVYFL
Trigger: GAGAAAATAGACACCCACAGATAAGTAGTATTTTAAATGGATGCAATTTGGGCGATAGTAAAGATAACTGGGAGTATATGATTGACAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517969.1
CDS GCA 72 bp AGGGGTGCCGGGCCGCGCCAGCGAGCGCACGTGCGCTaGCATGGCAACAGTGTCCCCTCCGCCCGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RGAGPRQRAHVR*HGNSVPSARSR
Trigger: GCGGCTGCGGGCGGAGGGGACACTGTTGCCATGGCAGCGCACGTGCGCTCGCTGGCGCGGCCCGGCACCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS GCA 72 bp AGCGCAGGGGTGCCGGGCCGCGCCAGCGAGCGCACGTaGGCTGCCATGGCAACAGTGTCCCCTCCGCCCGCA +
Preference number: 6 (lower is better)
Translates to: SAGVPGRASERT*AAMATVSPPPA
Trigger: TGCGGGCGGAGGGGACACTGTTGCCATGGCAGCGCACGTGCGCTCGCTGGCGCGGCCCGGCACCCCTGCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 72 bp GCAGCCGCTCGCCCGCTGATTGGCCGGCCCGCGGCCTaGCTACCGCTCCGCCCACGATCTGCGCCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: AAARPLIGRPAA*LPLRPRSAPEG
Trigger: GCCTTCAGGCGCAGATCGTGGGCGGAGCGGTAGCCAGGCCGCGGGCCGGCCAATCAGCGGGCGAGCGGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000174653.3
ENST00000518421.5
CDS CCA 72 bp TCGCCAGGATGTGGCCATTCCGCGAACCGGCGCGGGTaGTCAAAACGCAGAGGCCTGCGGTGCCCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: SPGCGHSANRRG*SKRRGLRCPAP
Trigger: CGGCGCTGGGCACCGCAGGCCTCTGCGTTTTGACCACCCGCGCCGGTTCGCGGAATGGCCACATCCTGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 72 bp CCCTCTCCAGGCTCGGGGTCGTCCCTACTCCTCACCTaGCCTTGCTGCTCTCAGCGCCCACTGCTCCTAGGC +
Preference number: 6 (lower is better)
Translates to: PSPGSGSSLLLT*PCCSQRPLLLG
Trigger: GCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGTGAGGAGTAGGGACGACCCCGAGCCTGGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS GCA 72 bp CCCTGGGGGACAGACACCCCAAGGCCCTCAGACGGTTaGATCTCTCTGGTGCCAGTCGCCAGGATGTGGCCA +
Preference number: 6 (lower is better)
Translates to: PWGTDTPRPSDG*ISLVPVARMWP
Trigger: TGGCCACATCCTGGCGACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCTTGGGGTGTCTGTCCCCCAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS GCA 72 bp CTGCATGAGCCTGAAGATAGCCCTCCCTGGCCTTGCTaGTCTCAGCGCCCACTGCTCCTAGGCGCGGACAGG +
Preference number: 6 (lower is better)
Translates to: LHEPEDSPPWPC*SQRPLLLGADR
Trigger: CCTGTCCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGGAGGGCTATCTTCAGGCTCATGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518421.5
CDS CAA 72 bp TCCCTGGGGGACAGACACCCCAAGGCCCTCAGACGGTaGCATCTCTCTGGTGCCAGTCGCCAGGATGTGGCC +
Preference number: 6 (lower is better)
Translates to: SLGDRHPKALRR*HLSGASRQDVA
Trigger: GGCCACATCCTGGCGACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCTTGGGGTGTCTGTCCCCCAGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS GCA 72 bp ACACCCCAAGGCCCTCAGACGGTTGCATCTCTCTGGTaGCAGTCGCCAGGATGTGGCCATTCCGCGAACCGG +
Preference number: 6 (lower is better)
Translates to: TPQGPQTVASLW*QSPGCGHSANR
Trigger: CCGGTTCGCGGAATGGCCACATCCTGGCGACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCTTGGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 72 bp GACGGTTGCATCTCTCTGGTGCCAGTCGCCAGGATGTaGCCATTCCGCGAACCGGCGCGGGTGGTCAAAACG +
Preference number: 6 (lower is better)
Translates to: DGCISLVPVARM*PFREPARVVKT
Trigger: CGTTTTGACCACCCGCGCCGGTTCGCGGAATGGCCACATCCTGGCGACTGGCACCAGAGAGATGCAACCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 72 bp CTTCCCCTCCTGCATGAGCCTGAAGATAGCCCTCCCTaGCCTTGCTGCTCTCAGCGCCCACTGCTCCTAGGC +
Preference number: 6 (lower is better)
Translates to: LPLLHEPEDSPP*PCCSQRPLLLG
Trigger: GCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGGAGGGCTATCTTCAGGCTCATGCAGGAGGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518421.5
CDS GCA 72 bp AGTTCCATTCAACCAAAAGGCCCTCCCTGGCCTTGCTaGTCTCAGCGCCCACTGCTCCTAGGCGCGGACAGG +
Preference number: 6 (lower is better)
Translates to: SSIQPKGPPWPC*SQRPLLLGADR
Trigger: CCTGTCCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGGAGGGCCTTTTGGTTGAATGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000174653.3
CDS CCA 72 bp CAGACACCCCAAGGCCCTCAGACGGTTGCATCTCTCTaGTGCCAGTCGCCAGGATGTGGCCATTCCGCGAAC +
Preference number: 6 (lower is better)
Translates to: QTPQGPQTVASL*CQSPGCGHSAN
Trigger: GTTCGCGGAATGGCCACATCCTGGCGACTGGCACCAGAGAGATGCAACCGTCTGAGGGCCTTGGGGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS GCA 72 bp CTCCATCTTTCAAGACCAGGCCCAATCTTCCCCTCCTaGATGAGCCTGAAGATAGCCCTCCCTCTCCCCGCC +
Preference number: 6 (lower is better)
Translates to: LHLSRPGPIFPS*MSLKIALPLPA
Trigger: GGCGGGGAGAGGGAGGGCTATCTTCAGGCTCATGCAGGAGGGGAAGATTGGGCCTGGTCTTGAAAGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521235.1
CDS CCA 72 bp GCGATATTCAGTTCCATTCAACCAAAAGGCCCTCCCTaGCCTTGCTGCTCTCAGCGCCCACTGCTCCTAGGC +
Preference number: 6 (lower is better)
Translates to: AIFSSIQPKGPP*PCCSQRPLLLG
Trigger: GCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAGGGAGGGCCTTTTGGTTGAATGGAACTGAATATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000174653.3
CDS TCA 72 bp CATCTTTGTGACTGGGTCGAATGTGTGTGTCCCCTGTaGTGGAGTAAGGCTCATGTTCAGGACCCCCTTGGG +
Preference number: 6 (lower is better)
Translates to: HLCDWVECVCPL*WSKAHVQDPLG
Trigger: CCCAAGGGGGTCCTGAACATGAGCCTTACTCCATCACAGGGGACACACACATTCGACCCAGTCACAAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000174653.3
ENST00000396926.8
ENST00000518421.5
ENST00000521280.5
ENST00000522320.1
ENST00000522606.5
CDS CCA 72 bp ATGCCAGTCAGCTTGACACAGGCATCAATCACCCCCTaGATCTCAGCAGTAATTGTGGAGCCTGTGATGGTG +
Preference number: 6 (lower is better)
Translates to: MPVSLTQASITP*ISAVIVEPVMV
Trigger: CACCATCACAGGCTCCACAATTACTGCTGAGATCCAGGGGGTGATTGATGCCTGTGTCAAGCTGACTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517499.5
CDS GCA 72 bp TTCTGCCCACCAGAATTGGTGGGAGGAATGGAAAGCTaGCCTTGGGGGTCTTTATTCATCCAATCAGAGCTA +
Preference number: 6 (lower is better)
Translates to: FCPPELVGGMES*PWGSLFIQSEL
Trigger: TAGCTCTGATTGGATGAATAAAGACCCCCAAGGGCAGCTTTCCATTCCTCCCACCAATTCTGGTGGGCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 72 bp TGTGGTTTGCTTTCTATTTCTGCCCACCAGAATTGGTaGGAGGAATGGAAAGCTGCCCTTGGGGGTCTTTAT +
Preference number: 6 (lower is better)
Translates to: CGLLSISAHQNW*EEWKAALGGLY
Trigger: ATAAAGACCCCCAAGGGCAGCTTTCCATTCCTCCCACCAATTCTGGTGGGCAGAAATAGAAAGCAAACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CCA 72 bp CTTTCTATTTCTGCCCACCAGAATTGGTGGGAGGAATaGAAAGCTGCCCTTGGGGGTCTTTATTCATCCAAT +
Preference number: 6 (lower is better)
Translates to: LSISAHQNWWEE*KAALGGLYSSN
Trigger: ATTGGATGAATAAAGACCCCCAAGGGCAGCTTTCCATTCCTCCCACCAATTCTGGTGGGCAGAAATAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS TCA 72 bp ATCGTTTTCACTGTGCAAAGGGGCCGGTATGTTGCATaGGAACTGAAATTCCAGAACAGTAGTACTACAGAG +
Preference number: 6 (lower is better)
Translates to: IVFTVQRGRYVA*ELKFQNSSTTE
Trigger: CTCTGTAGTACTACTGTTCTGGAATTTCAGTTCTCATGCAACATACCGGCCCCTTTGCACAGTGAAAACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523249.1
CDS TCA 72 bp TTTGCGTTGCCTGACTGCAACACAATCAGTGTTCTTTaGAGAGGGCTTCCAAGAACACTGAATTTGATGTCA +
Preference number: 6 (lower is better)
Translates to: FALPDCNTISVL*RGLPRTLNLMS
Trigger: TGACATCAAATTCAGTGTTCTTGGAAGCCCTCTTCAAAGAACACTGATTGTGTTGCAGTCAGGCAACGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517969.1
CDS TCA 72 bp ATCGTTTTCACTGTGCAAAGGGGCCGGTATGTTGCATaGGAACTGAAATTCCAGAACAGTAGTACTGAAATG +
Preference number: 6 (lower is better)
Translates to: IVFTVQRGRYVA*ELKFQNSSTEM
Trigger: CATTTCAGTACTACTGTTCTGGAATTTCAGTTCTCATGCAACATACCGGCCCCTTTGCACAGTGAAAACGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS TCA 72 bp TTGGGAAGGGAAGTTGTTCTAGACGTGGTGCAGATATaGGTACAAGAGAAGGAACTCTTTGACTTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: LGREVVLDVVQI*VQEKELFDLLF
Trigger: AAAAAGCAAGTCAAAGAGTTCCTTCTCTTGTACTCATATCTGCACCACGTCTAGAACAACTTCCCTTCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523249.1
CDS CAA 72 bp AGTGGTTACCAGAACATGTACAATTACATATGTGGTTaGCTTTCTATTTCTGCCCACCAGAATTGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: SGYQNMYNYICG*LSISAHQNWWE
Trigger: CTCCCACCAATTCTGGTGGGCAGAAATAGAAAGCAAACCACATATGTAATTGTACATGTTCTGGTAACCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517865.5
CDS CAA 72 bp CTGAGGCAATTAATATTACTGTATTTTAACACCATTTaGACTCTAGAAACCACAGAACACCTCCCTAGAAGT +
Preference number: 6 (lower is better)
Translates to: LRQLILLYFNTI*TLETTEHLPRS
Trigger: ACTTCTAGGGAGGTGTTCTGTGGTTTCTAGAGTCAAAATGGTGTTAAAATACAGTAATATTAATTGCCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521899.1
CDS CAA 72 bp ATCATATACTCCCAGTTATCTTTACTATCGCCCAAATaGCATCCATTTAAAATACTACTTATCTGTGGGTGT +
Preference number: 6 (lower is better)
Translates to: IIYSQLSLLSPK*HPFKILLICGC
Trigger: ACACCCACAGATAAGTAGTATTTTAAATGGATGCAATTTGGGCGATAGTAAAGATAACTGGGAGTATATGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517865.5
ENST00000517969.1