RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP2B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000006125

Ensembl transcript IDs: ENST00000587805.1, ENST00000588116.1, ENST00000590432.5, ENST00000590538.5, ENST00000591561.5, ENST00000591610.5, ENST00000592167.5, ENST00000593014.3, ENST00000610402.5, ENST00000612116.5, ENST00000614600.4, ENST00000616784.4, ENST00000618940.4, ENST00000620039.4, ENST00000621914.4

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGGCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATaGGCCAAGAGGGAAGCCGTGGTGGAGGCAACAGGTTTTGCCTCT +
Preference number: 1 (lower is better)
Translates to: QGNLHPTSPIWPSLE*AKREAVVEATGFAS
Trigger: AGAGGCAAAACCTGTTGCCTCCACCACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 90 bp GGATGCAGGGCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTaGAATGAGCCAAGAGGGAAGCCGTGGTGGAGGCAACAGGTTTTG +
Preference number: 1 (lower is better)
Translates to: GCRATSIPLPQFGQA*NEPRGKPWWRQQVL
Trigger: CAAAACCTGTTGCCTCCACCACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGCCCTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 90 bp CTGCTGGCCTCAATAAGTGGGGCTCCAGGGGCATATGGGAAACACTaGCTACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATT +
Preference number: 1 (lower is better)
Translates to: LLASISGAPGAYGKH*LHLHSGIWLYLRVI
Trigger: AATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACTTATTGAGGCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 90 bp CTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGTaGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTC +
Preference number: 1 (lower is better)
Translates to: LSSLHLCTYSAGLNK*GSRGIWETLATPSF
Trigger: GAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 90 bp CCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCTaGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTG +
Preference number: 1 (lower is better)
Translates to: PGAYGKHWLHLHSGI*LYLRVIQKIFSCHL
Trigger: CAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR TCA 90 bp CTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTaGAACATCATTCAAGAAGATCACCGTTCCCAACTGCAGAGCAAT +
Preference number: 1 (lower is better)
Translates to: LLSALVLTGSIVFAH*NIIQEDHRSQLQSN
Trigger: ATTGCTCTGCAGTTGGGAACGGTGATCTTCTTGAATGATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 90 bp AGATCACCGTTCCCAACTGCAGAGCAATCAAATGAGATTATAATATaGAAAGGGGGAAGCATGAAGGCTTGGCCAAGGAAAAGGAGTTTG +
Preference number: 1 (lower is better)
Translates to: RSPFPTAEQSNEIII*KGGSMKAWPRKRSL
Trigger: CAAACTCCTTTTCCTTGGCCAAGCCTTCATGCTTCCCCCTTTCCATATTATAATCTCATTTGATTGCTCTGCAGTTGGGAACGGTGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 90 bp CAGTGCGATTTTATGTGTGGTCACTGGTATTCAGATGGAGCTCCCTaGGGTTGTATAGTAGTAGGTGTCCAAAAATGTACAGCAGTTCTT +
Preference number: 1 (lower is better)
Translates to: QCDFMCGHWYSDGAP*GCIVVGVQKCTAVL
Trigger: AAGAACTGCTGTACATTTTTGGACACCTACTACTATACAACCCCAGGGAGCTCCATCTGAATACCAGTGACCACACATAAAATCGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588116.1
3UTR GCA 90 bp GGTATAACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTaGACACTGAAACATCATTCAAGAAGATCACCGTTCCCAACTGCA +
Preference number: 1 (lower is better)
Translates to: GITSVSFGADRLYSF*TLKHHSRRSPFPTA
Trigger: TGCAGTTGGGAACGGTGATCTTCTTGAATGATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGTTATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR GCA 90 bp TCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTaGCACCTGATGCCAATATACAGAGCGTCAAAATCAATATGGAAT +
Preference number: 1 (lower is better)
Translates to: SGIWLYLRVIQKIFS*HLMPIYRASKSIWN
Trigger: ATTCCATATTGATTTTGACGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGACGCCTGTGGAGCCTaGAGTGCCCCTGATTTAAGC +
Preference number: 2 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGDACGA*SAPDLS
Trigger: GCTTAAATCAGGGGCACTTCAGGCTCCACAGGCGTC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CAA 90 bp GCTTGGAATGAGCCAAGAGGGAAGCCGTGGTGGAGGCAACAGGTTTaGCCTCTCAGGAGAGGTCCTTTTATGGGAAGTAGAATTCCTCCC +
Preference number: 2 (lower is better)
Translates to: AWNEPRGKPWWRQQV*PLRRGPFMGSRIPP
Trigger: GGGAGGAATTCTACTTCCCATAAAAGGACCTCTCCTGAGAGGCAAAACCTGTTGCCTCCACCACGGCTTCCCTCTTGGCTCATTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTCAAGGTTTAAGAAAGTaGTTTGTGGGACCGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRQGLRK*FVGPLP
Trigger: GGGGAGCGGTCCCACAAAGCACTTTCTTAAACCTTG...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTTTTCCTACTGCCATGTaGTTCAGGGGTGGTGTGCAA +
Preference number: 2 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRFPTAM*FRGGVQ
Trigger: TTGCACACCACCCCTGAAGCACATGGCAGTAGGAAA...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTACCCTGAATATTGGGTaGCAGGCAATGCAACAAGTG +
Preference number: 2 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRTLNIG*QAMQQV
Trigger: CACTTGTTGCATTGCCTGGCACCCAATATTCAGGGT...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGGAACTTTACCAACCTaGTTTTCCGCTCCACACATC +
Preference number: 2 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGGTLPT*FSAPHI
Trigger: GATGTGTGGAGCGGAAAAGCAGGTTGGTAAAGTTCC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGCTACACCTTCATTCTaGCATCTGGCTTTACCTTCG +
Preference number: 2 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGATPSF*HLALPS
Trigger: CGAAGGTAAAGCCAGATGCCAGAATGAAGGTGTAGC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR TCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTGGAAAGGGGGAAGCATaGAGGCTTGGCCAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPGKGEA*RLGQGK
Trigger: TTTTCCTTGGCCAAGCCTTCATGCTTCCCCCTTTCC...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGCTCTACTCAAATTCCTaGATTAGTGGGATTAGCAGG +
Preference number: 2 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGLYSNS*ISGISR
Trigger: CCTGCTAATCCCACTAATTCAGGAATTTGAGTAGAG...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTGATGAGAACACTATTTaGAGTGTGAACCTTCTGCAC +
Preference number: 2 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRDENTI*SVNLLH
Trigger: GTGCAGAAGGTTCACACTGCAAATAGTGTTCTCATC...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGGGCTCCAGGGGCATATaGGAAACACTGGCTACACCT +
Preference number: 2 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKGSRGI*ETLATP
Trigger: AGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCC...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGCTAGGGTAGGTAACTaGATCTCTGCCTCCAGGACT +
Preference number: 2 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKARVGN*ISASRT
Trigger: AGTCCTGGAGGCAGAGATGCAGTTACCTACCCTAGC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGCAAAAGATATTCAGCTaGCACCTGATGCCAATATAC +
Preference number: 2 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGQKIFS*HLMPIY
Trigger: GTATATTGGCATCAGGTGGCAGCTGAATATCTTTTG...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGCTCCCCACAAGCTTTaGAACTGGTATGAAACAGGG +
Preference number: 2 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKAPHKL*NWYETG
Trigger: CCCTGTTTCATACCAGTTGCAAAGCTTGTGGGGAGC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR TCA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGGGAAAGGGGGAAGCATaGAGGCTTGGCCAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRAGKGEA*RLGQGK
Trigger: TTTTCCTTGGCCAAGCCTTCATGCTTCCCCCTTTCC...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR TCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGTATTCAGCTGCCACCTaGTGCCAATATACAGAGCGT +
Preference number: 2 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKYSAAT*CQYTER
Trigger: ACGCTCTGTATATTGGCATCAGGTGGCAGCTGAATA...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATGCTAGGGTAGGTAACTaGATCTCTGCCTCCAGGACT +
Preference number: 2 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHARVGN*ISASRT
Trigger: AGTCCTGGAGGCAGAGATGCAGTTACCTACCCTAGC...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAATGAGATTATAATATaGAAAGGGGGAAGCATGAAG +
Preference number: 2 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGNEIII*KGGSMK
Trigger: CTTCATGCTTCCCCCTTTCCATATTATAATCTCATT...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGATCCAACGCATTAAGTaGGGTAGGGGGAAGATTTCA +
Preference number: 2 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKIQRIK*GRGKIS
Trigger: TGAAATCTTCCCCCTACCCCACTTAATGCGTTGGAT...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTAATGAGATTATAATATaGAAAGGGGGAAGCATGAAG +
Preference number: 2 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPNEIII*KGGSMK
Trigger: CTTCATGCTTCCCCCTTTCCATATTATAATCTCATT...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGCTTCATTCTGGCATCTaGCTTTACCTTCGAGTAATT +
Preference number: 2 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKLHSGI*LYLRVI
Trigger: AATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAG...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR TCA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATCTCTACTCAAATTCCTaGATTAGTGGGATTAGCAGG +
Preference number: 2 (lower is better)
Translates to: LALPSSNSKDIQLPPDANLYSNS*ISGISR
Trigger: CCTGCTAATCCCACTAATTCAGGAATTTGAGTAGAG...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR GCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGATCTTAATATGCCCTaGAGACTAAGTATCATGAAG +
Preference number: 2 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKDLNMP*RLSIMK
Trigger: CTTCATGATACTTAGTCTGCAGGGCATATTAAGATC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR TCA 72 bp CTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATaGGCCAAGAGGGAAGCCGTGGTGGAGGCAACAGGT +
Preference number: 3 (lower is better)
Translates to: LHPTSPIWPSLE*AKREAVVEATG
Trigger: ACCTGTTGCCTCCACCACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 72 bp GATGGGAGGTGGCTTCCCCAAGGAGTGAAGAGTTCATaGGTTGGCTCAGTCAGGTCAGCTGAGAATAGGAGC +
Preference number: 3 (lower is better)
Translates to: DGRWLPQGVKSS*VGSVRSAENRS
Trigger: GCTCCTATTCTCAGCTGACCTGACTGAGCCAACCCATGAACTCTTCACTCCTTGGGGAAGCCACCTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CAA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCGTGGGATTAGCAGGTTaGTTCAGGGGAAAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIVGLAG*FRGKER
Trigger: CCTTTCCTTTCCCCTGAACAAACCTGCTAATCCCAC...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 72 bp CTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGTaGGGCTCCAGGGGCATATGGGAAACACTGGCTACA +
Preference number: 3 (lower is better)
Translates to: LHLCTYSAGLNK*GSRGIWETLAT
Trigger: TGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CAA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTACAGCATCTGGGTTCTaGTTCCCCATCTCTACTCAA +
Preference number: 3 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRTASGF*FPISTQ
Trigger: TTGAGTAGAGATGGGGAACAAGAACCCAGATGCTGT...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR TCA 72 bp GGTGTTTGCTTCTCCTGCTCTTTGTATGATGCCAGCTaGCATTACAAAGACACACTCAGGCAGAGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: GVCFSCSLYDAS*HYKDTLRQRRG
Trigger: CCCCCTCCTCTGCCTGAGTGTGTCTTTGTAATGTCAGCTGGCATCATACAAAGAGCAGGAGAAGCAAACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR-3UTR CAA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGACAGCATCTGGGTTCTaGTTCCCCATCTCTACTCAA +
Preference number: 3 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKTASGF*FPISTQ
Trigger: TTGAGTAGAGATGGGGAACAAGAACCCAGATGCTGT...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 72 bp TGTCACCTGCATCAGTGCGATTTTATGTGTGGTCACTaGTATTCAGATGGAGCTCCCTGGGGTTGTATAGTA +
Preference number: 3 (lower is better)
Translates to: CHLHQCDFMCGH*YSDGAPWGCIV
Trigger: TACTATACAACCCCAGGGAGCTCCATCTGAATACCAGTGACCACACATAAAATCGCACTGATGCAGGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588116.1
3UTR-3UTR CAA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATGGGAAGCATGAAGGCTaGGCCAAGGAAAAGGAGTTT +
Preference number: 3 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHGKHEG*AKEKEF
Trigger: AAACTCCTTTTCCTTGGCCAAGCCTTCATGCTTCCC...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR TCA 72 bp AAGAGTTCTGGGTGTTTGCTTCTCCTGCTCTTTGTATaGTGCCAGCTGACATTACAAAGACACACTCAGGCA +
Preference number: 3 (lower is better)
Translates to: KSSGCLLLLLFV*CQLTLQRHTQA
Trigger: TGCCTGAGTGTGTCTTTGTAATGTCAGCTGGCATCATACAAAGAGCAGGAGAAGCAAACACCCAGAACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR TCA 72 bp GCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTaGAACATCATTCAAGAAGATCACCGTTCCCAACTG +
Preference number: 3 (lower is better)
Translates to: ALVLTGSIVFAH*NIIQEDHRSQL
Trigger: CAGTTGGGAACGGTGATCTTCTTGAATGATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR TCA 72 bp ATCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTaGATTAGTGGGATTAGCAGGTTTGTTCAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: IWVLVPHLYSNS*ISGISRFVQGK
Trigger: TTTCCCCTGAACAAACCTGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 72 bp TTCCCAACTGCAGAGCAATCAAATGAGATTATAATATaGAAAGGGGGAAGCATGAAGGCTTGGCCAAGGAAA +
Preference number: 3 (lower is better)
Translates to: FPTAEQSNEIII*KGGSMKAWPRK
Trigger: TTTCCTTGGCCAAGCCTTCATGCTTCCCCCTTTCCATATTATAATCTCATTTGATTGCTCTGCAGTTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 72 bp TTTATGTGTGGTCACTGGTATTCAGATGGAGCTCCCTaGGGTTGTATAGTAGTAGGTGTCCAAAAATGTACA +
Preference number: 3 (lower is better)
Translates to: FMCGHWYSDGAP*GCIVVGVQKCT
Trigger: TGTACATTTTTGGACACCTACTACTATACAACCCCAGGGAGCTCCATCTGAATACCAGTGACCACACATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588116.1
3UTR GCA 72 bp TGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTaGCACCTGATGCCAATATACAGAGCGTCAAAATCA +
Preference number: 3 (lower is better)
Translates to: WLYLRVIQKIFS*HLMPIYRASKS
Trigger: TGATTTTGACGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
3UTR CCA 72 bp TCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATaGTCACAGGACAGCAATTTAAAAACCAAATGTGCT +
Preference number: 3 (lower is better)
Translates to: SFTKTFANSLDR*SQDSNLKTKCA
Trigger: AGCACATTTGGTTTTTAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000590538.5
ENST00000591610.5
ENST00000592167.5
ENST00000620039.4
3UTR GCA 72 bp TGGTTAATGACAGTCATTTCAATGCTTTCTACTGGTTaGACTAATCCCTTGATTTCTCATATGTACAAAAGT +
Preference number: 3 (lower is better)
Translates to: WLMTVISMLSTG*TNPLISHMYKS
Trigger: ACTTTTGTACATATGAGAAATCAAGGGATTAGTGCAACCAGTAGAAAGCATTGAAATGACTGTCATTAACCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCGACGCCTGTGGAGCCTaGAGTGCCCCTGATTTAAGC +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIDACGA*SAPDLS
Trigger: GCTTAAATCAGGGGCACTTCAGGCTCCACAGGCGTC...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTGGTCTCAGTCCAACATaGCGCCTGTGGAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRGLSPT*RLWSLK
Trigger: CTTCAGGCTCCACAGGCGTCATGTTGGACTGAGACC...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGGTCTCAGTCCAACATaGCGCCTGTGGAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGGLSPT*RLWSLK
Trigger: CTTCAGGCTCCACAGGCGTCATGTTGGACTGAGACC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTCTCAGGGCGACATACTaGACTTCTGGCTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRLRATY*TSGSPD
Trigger: GTCTGGGGAGCCAGAAGTGCAGTATGTCGCCCTGAG...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCCTCAGGGCGACATACTaGACTTCTGGCTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGILRATY*TSGSPD
Trigger: GTCTGGGGAGCCAGAAGTGCAGTATGTCGCCCTGAG...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGGGTGTGATGGGAGGTaGCTTCCCCAAGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGGCDGR*LPQGVK
Trigger: CTTCACTCCTTGGGGAAGCCACCTCCCATCACACCC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGGCTTCCCCAAGGAGTaGAGAGTTCATGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGGFPKE*RVHGLA
Trigger: AGCCAACCCATGAACTCTTCACTCCTTGGGGAAGCC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGAAGGATTGTCCCACTaGCGGACTTCCTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGEGLSH*RTSSNA
Trigger: GGCATTGGAGGAAGTCCGGCAGTGGGACAATCCTTC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610402.5
CDS-3UTR CCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTGGCTCCAGGGGCATATaGGAAACACTGGCTACACCT +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRGSRGI*ETLATP
Trigger: AGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCC...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTAGAGGGAAGCCGTGGTaGAGGCAACAGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRRGKPW*RQQVLP
Trigger: AGGCAAAACCTGTTGCCTCCACCACGGCTTCCCTCT...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGGAAAGGGGGAAGCATaGAGGCTTGGCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGGKGEA*RLGQGK
Trigger: TTTTCCTTGGCCAAGCCTTCATGCTTCCCCCTTTCC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGTTACCCGCTCACAGATaGTCTGAGCCTCCCGATCAT +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGLPAHR*SEPPDH
Trigger: ATGATCGGGAGGCTCAGAGCATCTGTGAGCGGGTAA...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTTTACCCGCTCACAGATaGTCTGAGCCTCCCGATCAT +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRLPAHR*SEPPDH
Trigger: ATGATCGGGAGGCTCAGAGCATCTGTGAGCGGGTAA...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCGCTTCAGGGGTGGTGTaGAAGGGACATATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIASGVV*KGHISS
Trigger: GGAGGAAATATGTCCCTTGCACACCACCCCTGAAGC...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGTTGTCTGCTTGCCCTaGCACACTTTTCCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGVVCLP*HTFPSG
Trigger: TCCAGAAGGAAAAGTGTGTCAGGGCAAGCAGACAAC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGCCTTGTTTCGGGGGTTaGGGGACATATTCTGATAGG +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGPCFGG*GTYSDR
Trigger: CCTATCAGAATATGTCCCTCAACCCCCGAAACAAGG...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCGCTTACACAGCGCTCTaGAGATTGCTCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIAYTAL*RLLHLD
Trigger: ATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTAAGC...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCAGCTCACTTCATCTCTaGACCTATTCTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGISSLHL*TYSAGL
Trigger: GAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCT...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTGCTCCCCACAAGCTTTaGAACTGGTATGAAACAGGG +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRAPHKL*NWYETG
Trigger: CCCTGTTTCATACCAGTTGCAAAGCTTGTGGGGAGC...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCCAAGGTTTAAGAAAGTaGTTTGTGGGACCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIQGLRK*FVGPLP
Trigger: GGGGAGCGGTCCCACAAAGCACTTTCTTAAACCTTG...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGTTTCCTACTGCCATGTaGTTCAGGGGTGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGFPTAM*FRGGVQ
Trigger: TTGCACACCACCCCTGAAGCACATGGCAGTAGGAAA...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGGAGTGAAGAGTTCATaGGTTGGCTCAGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGGVKSS*VGSVRS
Trigger: TGACCTGACTGAGCCAACCCATGAACTCTTCACTCC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTAGCTCTACACTTCAGTaGCAGCGTGTAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRSSTLQ*QRVIGV
Trigger: AACCCCAATTACACGCTGTCACTGAAGTGTAGAGCT...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCAGCTCTACACTTCAGTaGCAGCGTGTAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGISSTLQ*QRVIGV
Trigger: AACCCCAATTACACGCTGTCACTGAAGTGTAGAGCT...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGACCCTGAATATTGGGTaGCAGGCAATGCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGTLNIG*QAMQQV
Trigger: CACTTGTTGCATTGCCTGGCACCCAATATTCAGGGT...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTCCAAGAGGGAAGCCGTaGTGGAGGCAACAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPPRGKP*WRQQVL
Trigger: CAAAACCTGTTGCCTCCACCACGGCTTCCCTCTTGG...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTCGCTCACAGATGCTCTaGGCCTCCCGATCATCTTTA +
Preference number: 4 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPRSQML*ASRSSL
Trigger: TAAAGATGATCGGGAGGCTCAGAGCATCTGTGAGCG...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGACGCCTGTGGAGCCTaGAGTGCCCCTGATTTAAGC +
Preference number: 4 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKDACGA*SAPDLS
Trigger: GCTTAAATCAGGGGCACTTCAGGCTCCACAGGCGTC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGCTCCTGCTCTTTGTATaGTGCCAGCTGACATTACAA +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGLLLFV*CQLTLQ
Trigger: TTGTAATGTCAGCTGGCATCATACAAAGAGCAGGAG...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATCCGGACTTCCTCCAATaGCCCCGCCAAGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHPDFLQ*PRQGHC
Trigger: GCAGTGACCTTGGCGGGGGCATTGGAGGAAGTCCGG...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610402.5
CDS-3UTR CCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAACTCAAGACCTGCTaGACTAGCTCCTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGKLKTC*TSSCVS
Trigger: AGAAACACAGGAGCTAGTCCAGCAGGTCTTGAGTTT...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGCTGGCCTCAATAAGTaGGGCTCCAGGGGCATATGG +
Preference number: 4 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKAGLNK*GSRGIW
Trigger: CCATATGCCCCTGGAGCCCCACTTATTGAGGCCAGC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCATCCAACGCATTAAGTaGGGTAGGGGGAAGATTTCA +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIIQRIK*GRGKIS
Trigger: TGAAATCTTCCCCCTACCCCACTTAATGCGTTGGAT...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCCTCTACTCAAATTCCTaGATTAGTGGGATTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGILYSNS*ISGISR
Trigger: CCTGCTAATCCCACTAATTCAGGAATTTGAGTAGAG...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGGCTTTGCAACTGGTATaGAACAGGGTTATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGALQLV*NRVISD
Trigger: GTCTGAAATAACCCTGTTTCATACCAGTTGCAAAGC...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCACACTATTTGCAGTGTaGACCTTCTGCACTACTTGT +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGITLFAV*TFCTTC
Trigger: ACAAGTAGTGCAGAAGGTTCACACTGCAAATAGTGT...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGTTGTATGATGCCAGCTaGCATTACAAAGACACACTC +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGLYDAS*HYKDTL
Trigger: GAGTGTGTCTTTGTAATGTCAGCTGGCATCATACAA...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp TTCAGATGGAGCTCCCTGGGGTTGTATAGTAGTAGGTGTCCAAAAATGTACAGCCAGCGCTCTGCAGATTaGTCCACCTTGATGGCACAC +
Preference number: 4 (lower is better)
Translates to: FRWSSLGLYSSRCPKMYSQRSAD*STLMAH
Trigger: GTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTG...GCTGTACATTTTTGGACACCTACTACTATACAACCCCAGGGAGCTCCATCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR GCA 90 bp TGGTCACTGGTATTCAGATGGAGCTCCCTGGGGTTGTATAGTAGTAGGTGTCCAGCTTACACAGCGCTCTaGAGATTGCTCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: WSLVFRWSSLGLYSSRCPAYTAL*RLLHLD
Trigger: ATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTAAGC...TGGACACCTACTACTATACAACCCCAGGGAGCTCCATCTGAATACCAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR GCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCGATGAGAACACTATTTaGAGTGTGAACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIDENTI*SVNLLH
Trigger: GTGCAGAAGGTTCACACTGCAAATAGTGTTCTCATC...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAGAGTTCTGGGTGTTTaGTTCTCCTGCTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGRVLGV*FSCSLY
Trigger: ATACAAAGAGCAGGAGAAGCAAACACCCAGAACTCT...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCAGAGTTCTGGGTGTTTaGTTCTCCTGCTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIRVLGV*FSCSLY
Trigger: ATACAAAGAGCAGGAGAAGCAAACACCCAGAACTCT...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTCTAGGTCTAAGCCACTaGGCAAAACCCACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPLGLSH*AKPTLP
Trigger: TGGCAAAGTGGGTTTTGCGCAGTGGCTTAGACCTAG...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621914.4
CDS-3UTR GCA 90 bp TTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGTCACAGGACAGCCTCAGGGCGACATACTaGACTTCTGGCTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LSFTKTFANSLDRWSQDSLRATY*TSGSPD
Trigger: GTCTGGGGAGCCAGAAGTGCAGTATGTCGCCCTGAG...GCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR GCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTACCCTGAATATTGGGTaGCAGGCAATGCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPTLNIG*QAMQQV
Trigger: CACTTGTTGCATTGCCTGGCACCCAATATTCAGGGT...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTGGAACTTTACCAACCTaGTTTTCCGCTCCACACATC +
Preference number: 4 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPGTLPT*FSAPHI
Trigger: GATGTGTGGAGCGGAAAAGCAGGTTGGTAAAGTTCC...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGGAGGCAACAGGTTTTaGCTCTCAGGAGAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKGGNRF*LSGEVL
Trigger: AAGGACCTCTCCTGAGAGGCAAAACCTGTTGCCTCC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTGGTGTTTGCTTCTCCTaGTCTTTGTATGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPGVCFS*SLYDAS
Trigger: GCTGGCATCATACAAAGAGCAGGAGAAGCAAACACC...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGCGCAAAACCCACTTTaGCAGGGACAAAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKAQNPL*QGQRWW
Trigger: CCACCATCTTTGTCCCTGGCAAAGTGGGTTTTGCGC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621914.4
CDS-3UTR CCA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCACAGTTCACTACGTCTaGAAAGAGAGAACTAACATC +
Preference number: 4 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGITVHYV*KERTNI
Trigger: GATGTTAGTTCTCTCTTTCCAGACGTAGTGAACTGT...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp GCAACCTCCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGCTTCATTCTGGCATCTaGCTTTACCTTCGAGTAATT +
Preference number: 4 (lower is better)
Translates to: ATSIPLPQFGQAWNEPRGLHSGI*LYLRVI
Trigger: AATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAG...CCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGGAGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCAGCTGGCCTCAATAAGTaGGGCTCCAGGGGCATATGG +
Preference number: 4 (lower is better)
Translates to: SGFLFPISTQIPELVGLAAGLNK*GSRGIW
Trigger: CCATATGCCCCTGGAGCCCCACTTATTGAGGCCAGC...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATGGGTGTGATGGGAGGTaGCTTCCCCAAGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHGCDGR*LPQGVK
Trigger: CTTCACTCCTTGGGGAAGCCACCTCCCATCACACCC...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGCAGCGCTCTGCAGATTaGTCCACCTTGATGGCACAC +
Preference number: 4 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRAQRSAD*STLMAH
Trigger: GTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTG...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTGATCTTAATATGCCCTaGAGACTAAGTATCATGAAG +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRDLNMP*RLSIMK
Trigger: CTTCATGATACTTAGTCTGCAGGGCATATTAAGATC...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATTTGGGTGCCAGGCAATaGAACAAGTGCCCGCAGATC +
Preference number: 4 (lower is better)
Translates to: LALPSSNSKDIQLPPDANLGARQ*NKCPQI
Trigger: GATCTGCGGGCACTTGTTGCATTGCCTGGCACCCAA...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp TGGTCACTGGTATTCAGATGGAGCTCCCTGGGGTTGTATAGTAGTAGGTGTCCAAAACTCAAGACCTGCTaGACTAGCTCCTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: WSLVFRWSSLGLYSSRCPKLKTC*TSSCVS
Trigger: AGAAACACAGGAGCTAGTCCAGCAGGTCTTGAGTTT...TGGACACCTACTACTATACAACCCCAGGGAGCTCCATCTGAATACCAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR CCA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGGGCTCCAGGGGCATATaGGAAACACTGGCTACACCT +
Preference number: 4 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRAGSRGI*ETLATP
Trigger: AGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCC...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTCACAAGCTTTGCAACTaGTATGAAACAGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRHKLCN*YETGLF
Trigger: AAATAACCCTGTTTCATACCAGTTGCAAAGCTTGTG...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATAGAGGGAAGCCGTGGTaGAGGCAACAGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHRGKPW*RQQVLP
Trigger: AGGCAAAACCTGTTGCCTCCACCACGGCTTCCCTCT...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCACCAAGAGGGAAGCCGTaGTGGAGGCAACAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SGFLFPISTQIPELVGLAPRGKP*WRQQVL
Trigger: CAAAACCTGTTGCCTCCACCACGGCTTCCCTCTTGG...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATCGCTCACAGATGCTCTaGGCCTCCCGATCATCTTTA +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHRSQML*ASRSSL
Trigger: TAAAGATGATCGGGAGGCTCAGAGCATCTGTGAGCG...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp TTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGTCACAGGACAGCCGCTCACAGATGCTCTaGGCCTCCCGATCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LSFTKTFANSLDRWSQDSRSQML*ASRSSL
Trigger: TAAAGATGATCGGGAGGCTCAGAGCATCTGTGAGCG...GCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR TCA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATGGAAAGGGGGAAGCATaGAGGCTTGGCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LALPSSNSKDIQLPPDANGKGEA*RLGQGK
Trigger: TTTTCCTTGGCCAAGCCTTCATGCTTCCCCCTTTCC...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACCTGCATCAGTGCGATTTTATGTGTGGTCACTGGTATTCAGATGGAGCTCCCTTGTCACCTGCATCAGTaGGATTTTATGTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TCISAILCVVTGIQMELPCHLHQ*DFMCGH
Trigger: GTGACCACACATAAAATCGCACTGATGCAGGTGACA...AGGGAGCTCCATCTGAATACCAGTGACCACACATAAAATCGCACTGATGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR GCA 90 bp TTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGTCACAGGACAGCTTAATGTGCACCTGCTaGCACACCCGAGGATTCCCT +
Preference number: 4 (lower is better)
Translates to: LSFTKTFANSLDRWSQDSLMCTC*HTRGFP
Trigger: AGGGAATCCTCGGGTGTGGCAGCAGGTGCACATTAA...GCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592167.5
CDS-3UTR GCA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCAGCTTCAGGGGTGGTGTaGAAGGGACATATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGFLFPISTQIPELVGLAASGVV*KGHISS
Trigger: GGAGGAAATATGTCCCTTGCACACCACCCCTGAAGC...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATGGAGGCAACAGGTTTTaGCTCTCAGGAGAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHGGNRF*LSGEVL
Trigger: AAGGACCTCTCCTGAGAGGCAAAACCTGTTGCCTCC...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp TTCAGATGGAGCTCCCTGGGGTTGTATAGTAGTAGGTGTCCAAAAATGTACAGCTCAGATGGAGCTCCCTaGGGTTGTATAGTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: FRWSSLGLYSSRCPKMYSSDGAP*GCIVVG
Trigger: ACCTACTACTATACAACCCCAGGGAGCTCCATCTGA...GCTGTACATTTTTGGACACCTACTACTATACAACCCCAGGGAGCTCCATCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR CCA 90 bp AGTGCGATTTTATGTGTGGTCACTGGTATTCAGATGGAGCTCCCTGGGGTTGTATTTATGTGTGGTCACTaGTATTCAGATGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SAILCVVTGIQMELPGVVFMCGH*YSDGAP
Trigger: GGGAGCTCCATCTGAATACCAGTGACCACACATAAA...TACAACCCCAGGGAGCTCCATCTGAATACCAGTGACCACACATAAAATCGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR CCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGCATGTGCTTCAGGGGTaGTGTGCAAGGGACATATTT +
Preference number: 4 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKHVLQG*CARDIF
Trigger: AAATATGTCCCTTGCACACCACCCCTGAAGCACATG...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGAGCAGATCAGAGAGCTaGAGGGATAAAGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKSRSES*RDKEHL
Trigger: CAAATGCTCTTTATCCCTTCAGCTCTCTGATCTGCT...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGCCTTGTTTCGGGGGTTaGGGGACATATTCTGATAGG +
Preference number: 4 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRAPCFGG*GTYSDR
Trigger: CCTATCAGAATATGTCCCTCAACCCCCGAAACAAGG...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGGTGTAATGGTTTCCTaGCCGTCACGATTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKGVMVS*PSRFFS
Trigger: AGAAAAGAATCGTGACGGGCAGGAAACCATTACACC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCAGCGCTCTGCAGATTaGTCCACCTTGATGGCACAC +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQQRSAD*STLMAH
Trigger: GTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTG...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp GCCAACTCCTTAGATAGATGGTCACAGGACAGCAATTTAAAAACCAAATGTGCTTTACCCGCTCACAGATaGTCTGAGCCTCCCGATCAT +
Preference number: 4 (lower is better)
Translates to: ANSLDRWSQDSNLKTKCALPAHR*SEPPDH
Trigger: ATGATCGGGAGGCTCAGAGCATCTGTGAGCGGGTAA...AGCACATTTGGTTTTTAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR GCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATAGCTCACTTCATCTCTaGACCTATTCTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHSSLHL*TYSAGL
Trigger: GAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCT...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGTTGGGTGCCAGGCAATaGAACAAGTGCCCGCAGATC +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQLGARQ*NKCPQI
Trigger: GATCTGCGGGCACTTGTTGCATTGCCTGGCACCCAA...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATCAAGGTTTAAGAAAGTaGTTTGTGGGACCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LALPSSNSKDIQLPPDANQGLRK*FVGPLP
Trigger: GGGGAGCGGTCCCACAAAGCACTTTCTTAAACCTTG...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTCTTCATTCTGGCATCTaGCTTTACCTTCGAGTAATT +
Preference number: 4 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPLHSGI*LYLRVI
Trigger: AATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAG...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGAACTGCCTGAACCTCTaGGATGATCTTAATATGCCC +
Preference number: 4 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKNCLNL*DDLNMP
Trigger: GGGCATATTAAGATCATCCCAGAGGTTCAGGCAGTT...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGAACTGCCTGAACCTCTaGGATGATCTTAATATGCCC +
Preference number: 4 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKNCLNL*DDLNMP
Trigger: GGGCATATTAAGATCATCCCAGAGGTTCAGGCAGTT...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATGGAGTGAAGAGTTCATaGGTTGGCTCAGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHGVKSS*VGSVRS
Trigger: TGACCTGACTGAGCCAACCCATGAACTCTTCACTCC...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp TTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGTCACAGGACAGCGAGGAGTGCTGGGGATaGCACCAAAGCTATTTTTGT +
Preference number: 4 (lower is better)
Translates to: LSFTKTFANSLDRWSQDSEECWG*HQSYFC
Trigger: ACAAAAATAGCTTTGGTGTCATCCCCAGCACTCCTC...GCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR TCA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATGAGGAGTGCTGGGGATaGCACCAAAGCTATTTTTGT +
Preference number: 4 (lower is better)
Translates to: LALPSSNSKDIQLPPDANEECWG*HQSYFC
Trigger: ACAAAAATAGCTTTGGTGTCATCCCCAGCACTCCTC...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATTATTCAGCTGCCACCTaGTGCCAATATACAGAGCGT +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHYSAAT*CQYTER
Trigger: ACGCTCTGTATATTGGCATCAGGTGGCAGCTGAATA...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGGCTTTGCAACTGGTATaGAACAGGGTTATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKALQLV*NRVISD
Trigger: GTCTGAAATAACCCTGTTTCATACCAGTTGCAAAGC...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGACACTATTTGCAGTGTaGACCTTCTGCACTACTTGT +
Preference number: 4 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKTLFAV*TFCTTC
Trigger: ACAAGTAGTGCAGAAGGTTCACACTGCAAATAGTGT...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGTTGTATGATGCCAGCTaGCATTACAAAGACACACTC +
Preference number: 4 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKLYDAS*HYKDTL
Trigger: GAGTGTGTCTTTGTAATGTCAGCTGGCATCATACAA...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGGCTAGGGTAGGTAACTaGATCTCTGCCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQARVGN*ISASRT
Trigger: AGTCCTGGAGGCAGAGATGCAGTTACCTACCCTAGC...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATAGGCAATGCAACAAGTaGCCGCAGATCAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: LALPSSNSKDIQLPPDANRQCNK*PQIKQC
Trigger: ACACTGTTTGATCTGCGGGCACTTGTTGCATTGCCT...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATGGAACTTTACCAACCTaGTTTTCCGCTCCACACATC +
Preference number: 4 (lower is better)
Translates to: LALPSSNSKDIQLPPDANGTLPT*FSAPHI
Trigger: GATGTGTGGAGCGGAAAAGCAGGTTGGTAAAGTTCC...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGATGAGAACACTATTTaGAGTGTGAACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKDENTI*SVNLLH
Trigger: GTGCAGAAGGTTCACACTGCAAATAGTGTTCTCATC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGATTGTGTTGTCTGCTTaGCCTGACACACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKIVLSA*PDTLFL
Trigger: AAGGAAAAGTGTGTCAGGGCAAGCAGACAACACAAT...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCAGGTGTTTGCTTCTCCTaGTCTTTGTATGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGFLFPISTQIPELVGLAGVCFS*SLYDAS
Trigger: GCTGGCATCATACAAAGAGCAGGAGAAGCAAACACC...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp TGTCACCTGCATCAGTGCGATTTTATGTGTGGTCACTGGTATTCAGATGGAGCTGTGCGATTTTATGTGTaGTCACTGGTATTCAGATGG +
Preference number: 4 (lower is better)
Translates to: CHLHQCDFMCGHWYSDGAVRFYV*SLVFRW
Trigger: CCATCTGAATACCAGTGACCACACATAAAATCGCAC...AGCTCCATCTGAATACCAGTGACCACACATAAAATCGCACTGATGCAGGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR CCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATGCTACACCTTCATTCTaGCATCTGGCTTTACCTTCG +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHATPSF*HLALPS
Trigger: CGAAGGTAAAGCCAGATGCCAGAATGAAGGTGTAGC...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGTGTAACAGGGTCAGTTaGGAGAAGGCGCCAATAAAT +
Preference number: 4 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRACNRVS*EKAPIN
Trigger: ATTTATTGGCGCCTTCTCTCAACTGACCCTGTTACA...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp TTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGTCACAGGACAGCTGTAACAGGGTCAGTTaGGAGAAGGCGCCAATAAAT +
Preference number: 4 (lower is better)
Translates to: LSFTKTFANSLDRWSQDSCNRVS*EKAPIN
Trigger: ATTTATTGGCGCCTTCTCTCAACTGACCCTGTTACA...GCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR TCA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCAAGCAGATCAGAGAGCTaGAGGGATAAAGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: SGFLFPISTQIPELVGLASRSES*RDKEHL
Trigger: CAAATGCTCTTTATCCCTTCAGCTCTCTGATCTGCT...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGGTTGTCTGCTTGCCCTaGCACACTTTTCCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQVVCLP*HTFPSG
Trigger: TCCAGAAGGAAAAGTGTGTCAGGGCAAGCAGACAAC...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCAGGTGTAATGGTTTCCTaGCCGTCACGATTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SGFLFPISTQIPELVGLAGVMVS*PSRFFS
Trigger: AGAAAAGAATCGTGACGGGCAGGAAACCATTACACC...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGAGAGAATATTTTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGCAGCGCTCTGCAGATTaGTCCACCTTGATGGCACAC +
Preference number: 4 (lower is better)
Translates to: RENILSFTKTFANSLDRWQRSAD*STLMAH
Trigger: GTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTG...CCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAAAATATTCTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR CCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATAAACTCAAGACCTGCTaGACTAGCTCCTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHKLKTC*TSSCVS
Trigger: AGAAACACAGGAGCTAGTCCAGCAGGTCTTGAGTTT...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGGAGGAGTGCTGGGGATaGCACCAAAGCTATTTTTGT +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQEECWG*HQSYFC
Trigger: ACAAAAATAGCTTTGGTGTCATCCCCAGCACTCCTC...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp ACGTTTGCCAACTCCTTAGATAGATGGTCACAGGACAGCAATTTAAAAACCAAAAGCTCTACACTTCAGTaGCAGCGTGTAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TFANSLDRWSQDSNLKTKSSTLQ*QRVIGV
Trigger: AACCCCAATTACACGCTGTCACTGAAGTGTAGAGCT...TTTGGTTTTTAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR GCA 90 bp GCCAACTCCTTAGATAGATGGTCACAGGACAGCAATTTAAAAACCAAATGTGCTGGTGTAATGGTTTCCTaGCCGTCACGATTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ANSLDRWSQDSNLKTKCAGVMVS*PSRFFS
Trigger: AGAAAAGAATCGTGACGGGCAGGAAACCATTACACC...AGCACATTTGGTTTTTAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590538.5
ENST00000591610.5
ENST00000620039.4
CDS-3UTR GCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGAGGCAATGCAACAAGTaGCCGCAGATCAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQRQCNK*PQIKQC
Trigger: ACACTGTTTGATCTGCGGGCACTTGTTGCATTGCCT...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGGCTACACCTTCATTCTaGCATCTGGCTTTACCTTCG +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQATPSF*HLALPS
Trigger: CGAAGGTAAAGCCAGATGCCAGAATGAAGGTGTAGC...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGCATGAAATAGGGGTGTaGGGTAGTTTTGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRAHEIGV*GSFALV
Trigger: AACAAGAGCAAAACTACCCCACACCCCTATTTCATG...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCATGTGCTTCAGGGGTaGTGTGCAAGGGACATATTT +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQHVLQG*CARDIF
Trigger: AAATATGTCCCTTGCACACCACCCCTGAAGCACATG...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR TCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTCCTGCTCTTTGTATaGTGCCAGCTGACATTACAA +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQLLLFV*CQLTLQ
Trigger: TTGTAATGTCAGCTGGCATCATACAAAGAGCAGGAG...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGAGAGAATATTTTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGGCTTACACAGCGCTCTaGAGATTGCTCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: RENILSFTKTFANSLDRWAYTAL*RLLHLD
Trigger: ATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTAAGC...CCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAAAATATTCTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR GCA 90 bp AGAGAGAATATTTTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGTCTTTAATGTGCACCTaGTGCCACACCCGAGGATTC +
Preference number: 4 (lower is better)
Translates to: RENILSFTKTFANSLDRWSLMCT*CHTRGF
Trigger: GAATCCTCGGGTGTGGCAGCAGGTGCACATTAAAGA...CCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAAAATATTCTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592167.5
CDS-3UTR GCA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCACAAAAGATATTCAGCTaGCACCTGATGCCAATATAC +
Preference number: 4 (lower is better)
Translates to: SGFLFPISTQIPELVGLAQKIFS*HLMPIY
Trigger: GTATATTGGCATCAGGTGGCAGCTGAATATCTTTTG...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATACAGTTCACTACGTCTaGAAAGAGAGAACTAACATC +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHTVHYV*KERTNI
Trigger: GATGTTAGTTCTCTCTTTCCAGACGTAGTGAACTGT...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGAATGAGATTATAATATaGAAAGGGGGAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKNEIII*KGGSMK
Trigger: CTTCATGCTTCCCCCTTTCCATATTATAATCTCATT...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGATTGTGTTGTCTGCTTaGCCTGACACACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQIVLSA*PDTLFL
Trigger: AAGGAAAAGTGTGTCAGGGCAAGCAGACAACACAAT...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATCACAAGCTTTGCAACTaGTATGAAACAGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: LALPSSNSKDIQLPPDANHKLCN*YETGLF
Trigger: AAATAACCCTGTTTCATACCAGTTGCAAAGCTTGTG...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp AGAGAGAATATTTTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGGGTGTAATGGTTTCCTaGCCGTCACGATTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RENILSFTKTFANSLDRWGVMVS*PSRFFS
Trigger: AGAAAAGAATCGTGACGGGCAGGAAACCATTACACC...CCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAAAATATTCTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000590538.5
ENST00000620039.4
CDS-3UTR GCA 90 bp TTAGGATCTTCACAGTCTATTTTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGGTGTAATGGTTTCCTaGCCGTCACGATTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LGSSQSILSFTKTFANSLGVMVS*PSRFFS
Trigger: AGAAAAGAATCGTGACGGGCAGGAAACCATTACACC...TAAGGAGTTGGCAAACGTTTTTGTAAAGGACAAAATAGACTGTGAAGATCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591610.5
CDS-3UTR CCA 90 bp GCCAACTCCTTAGATAGATGGTCACAGGACAGCAATTTAAAAACCAAATGTGCTAACTCCTTAGATAGATaGTCACAGGACAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: ANSLDRWSQDSNLKTKCANSLDR*SQDSNL
Trigger: TAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTT...AGCACATTTGGTTTTTAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000590538.5
ENST00000591610.5
ENST00000592167.5
ENST00000620039.4
CDS-3UTR CCA 90 bp AGAGAGAATATTTTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGAAACTCAAGACCTGCTaGACTAGCTCCTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RENILSFTKTFANSLDRWKLKTC*TSSCVS
Trigger: AGAAACACAGGAGCTAGTCCAGCAGGTCTTGAGTTT...CCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAAAATATTCTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620039.4
CDS-3UTR CCA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATAATGAGATTATAATATaGAAAGGGGGAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHNEIII*KGGSMK
Trigger: CTTCATGCTTCCCCCTTTCCATATTATAATCTCATT...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR GCA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGGATCTTAATATGCCCTaGAGACTAAGTATCATGAAG +
Preference number: 4 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQDLNMP*RLSIMK
Trigger: CTTCATGATACTTAGTCTGCAGGGCATATTAAGATC...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CCA 90 bp ACGTTTGCCAACTCCTTAGATAGATGGTCACAGGACAGCAATTTAAAAACCAAAAACTCCTTAGATAGATaGTCACAGGACAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: TFANSLDRWSQDSNLKTKNSLDR*SQDSNL
Trigger: TAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTT...TTTGGTTTTTAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000590538.5
ENST00000591610.5
ENST00000592167.5
ENST00000620039.4
CDS-3UTR CCA 90 bp AACTCCTTAGATAGATGGTCACAGGACAGCAATTTAAAAACCAAATGTGCTTTAAACTCCTTAGATAGATaGTCACAGGACAGCAATTTA +
Preference number: 4 (lower is better)
Translates to: NSLDRWSQDSNLKTKCALNSLDR*SQDSNL
Trigger: TAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTT...TAAAGCACATTTGGTTTTTAAATTGCTGTCCTGTGACCATCTATCTAAGGAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000590538.5
ENST00000591610.5
ENST00000592167.5
CDS CCA 90 bp CACGCTCTTAGGATTTCCTCGCCTCCGCCGGTCTCCGACCCAGCCTaGTGTTACCCTTCTCTCCGTCCCCGACCCCGTCAATTAGGGACA +
Preference number: 5 (lower is better)
Translates to: HALRISSPPPVSDPA*CYPSLRPRPRQLGT
Trigger: TGTCCCTAATTGACGGGGTCGGGGACGGAGAGAAGGGTAACACCAGGCTGGGTCGGAGACCGGCGGAGGCGAGGAAATCCTAAGAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000590432.5
ENST00000612116.5
ENST00000614600.4
CDS TCA 90 bp CGCCGCGTGACGTCATCGGGGTGCGCGGTAGACCTAGAAAGCCTGTaGTCTCTTGTCGCCTTCCAGACCCAAAGATTTCCTTTGGTCCCG +
Preference number: 5 (lower is better)
Translates to: RRVTSSGCAVDLESL*SLVAFQTQRFPLVP
Trigger: CGGGACCAAAGGAAATCTTTGGGTCTGGAAGGCGACAAGAGATCACAGGCTTTCTAGGTCTACCGCGCACCCCGATGACGTCACGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616784.4
CDS GCA 90 bp TACCCTGAGGCTTTTCCCTCTCAATGGTCACACCCGACGGTTCCCTaGATCATCAACGGTCACGCTCTTAGGATTTCCTCGCCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: YPEAFPSQWSHPTVP*IINGHALRISSPPP
Trigger: CGGCGGAGGCGAGGAAATCCTAAGAGCGTGACCGTTGATGATGCAGGGAACCGTCGGGTGTGACCATTGAGAGGGAAAAGCCTCAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590432.5
CDS GCA 90 bp TTTCTCCAACCTTTTCCCTCTCAATGGTCACACCCGACGGTTCCCTaGATCATCAACGGTCACGCTCTTAGGATTTCCTCGCCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: FLQPFPSQWSHPTVP*IINGHALRISSPPP
Trigger: CGGCGGAGGCGAGGAAATCCTAAGAGCGTGACCGTTGATGATGCAGGGAACCGTCGGGTGTGACCATTGAGAGGGAAAAGGTTGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612116.5
ENST00000618940.4
CDS-3UTR CAA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCTCCCACTTCCCCAATTaGGCCAAGCTTGGAATGAGC +
Preference number: 5 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGISHFPN*AKLGMS
Trigger: GCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGA...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCGGGAAGCATGAAGGCTaGGCCAAGGAAAAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIGKHEG*AKEKEF
Trigger: AAACTCCTTTTCCTTGGCCAAGCCTTCATGCTTCCC...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS CCA 90 bp AAAGCCTGTGATCTCTTGTCGCCTTCCAGACCCAAAGATTTCCTTTaGTCCCGGCAAGCTAGCCCATCTGGGCCTCAGAGGATGTTAAGT +
Preference number: 5 (lower is better)
Translates to: KACDLLSPSRPKDFL*SRQASPSGPQRMLS
Trigger: ACTTAACATCCTCTGAGGCCCAGATGGGCTAGCTTGCCGGGACCAAAGGAAATCTTTGGGTCTGGAAGGCGACAAGAGATCACAGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616784.4
CDS-3UTR CAA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTTCATCCTTCAAGCACTaGCGGAGCGGCTCACAGAGA +
Preference number: 5 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPSSFKH*RSGSQR
Trigger: TCTCTGTGAGCCGCTCCGCAAGTGCTTGAAGGATGA...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp AGTGGGGCTCCAGGGGCATATGGGAAACACTGGCTACACCTTCATTCTGGCATCGGGTGTGGGGTAGTTTaGCTCTTGTTTTCCACGATT +
Preference number: 5 (lower is better)
Translates to: SGAPGAYGKHWLHLHSGIGCGVV*LLFSTI
Trigger: AATCGTGGAAAACAAGAGCAAAACTACCCCACACCC...GATGCCAGAATGAAGGTGTAGCCAGTGTTTCCCATATGCCCCTGGAGCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGAGGCTGAGAGAAGCCTaGTTTCGGGGGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKRLREA*FRGLRD
Trigger: GTCCCTCAACCCCCGAAACAAGGCTTCTCTCAGCCT...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp CCATCCCACTTCCCCAATTTGGCCAAGCTTGGAATGAGCCAAGAGGGAAGCCGTAAGAGTTCTGGGTGTTaGCTTCTCCTGCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: PSHFPNLAKLGMSQEGSRKSSGC*LLLLFV
Trigger: TACAAAGAGCAGGAGAAGCAAACACCCAGAACTCTT...ACGGCTTCCCTCTTGGCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp TCAGATGGAGCTCCCTGGGGTTGTATAGTAGTAGGTGTCCAAAAATGTACAGCAACAGCGCTCTGCAGATaGCTCCACCTTGATGGCACA +
Preference number: 5 (lower is better)
Translates to: SDGAPWGCIVVGVQKCTATALCR*LHLDGT
Trigger: TGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTGT...TGCTGTACATTTTTGGACACCTACTACTATACAACCCCAGGGAGCTCCATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR CAA 90 bp AGTGCGATTTTATGTGTGGTCACTGGTATTCAGATGGAGCTCCCTGGGGTTGTATGGAGCTCCCTGGGGTaGTATAGTAGTAGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: SAILCVVTGIQMELPGVVWSSLG*YSSRCP
Trigger: TGGACACCTACTACTATACAACCCCAGGGAGCTCCA...TACAACCCCAGGGAGCTCCATCTGAATACCAGTGACCACACATAAAATCGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR CAA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTACAGCATCTGGGTTCTaGTTCCCCATCTCTACTCAA +
Preference number: 5 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPTASGF*FPISTQ
Trigger: TTGAGTAGAGATGGGGAACAAGAACCCAGATGCTGT...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTAACCTTCTGCACTACTaGTATCCACTGACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPNLLHY*YPLTPG
Trigger: TCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTT...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATAGGCTGAGAGAAGCCTaGTTTCGGGGGTTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHRLREA*FRGLRD
Trigger: GTCCCTCAACCCCCGAAACAAGGCTTCTCTCAGCCT...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCATCATCCTTCAAGCACTaGCGGAGCGGCTCACAGAGA +
Preference number: 5 (lower is better)
Translates to: SGFLFPISTQIPELVGLASSFKH*RSGSQR
Trigger: TCTCTGTGAGCCGCTCCGCAAGTGCTTGAAGGATGA...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp TTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGTCACAGGACAGCTCATCCTTCAAGCACTaGCGGAGCGGCTCACAGAGA +
Preference number: 5 (lower is better)
Translates to: LSFTKTFANSLDRWSQDSSSFKH*RSGSQR
Trigger: TCTCTGTGAGCCGCTCCGCAAGTGCTTGAAGGATGA...GCTGTCCTGTGACCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591610.5
ENST00000620039.4
CDS-3UTR CAA 90 bp AGTGTGAACCTTCTGCACTACTTGTATCCACTGACTCCAGGAATAAGTCCCAAGGTGGGATTAGCAGGTTaGTTCAGGGGAAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SVNLLHYLYPLTPGISPKVGLAG*FRGKER
Trigger: CCTTTCCTTTCCCCTGAACAAACCTGCTAATCCCAC...CTTGGGACTTATTCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTTCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGTGGAGGCAACAGGTTTaGCCTCTCAGGAGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRAWRQQV*PLRRGP
Trigger: AGGACCTCTCCTGAGAGGCAAAACCTGTTGCCTCCA...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATTGGAGGCAACAGGTTTaGCCTCTCAGGAGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LALPSSNSKDIQLPPDANWRQQV*PLRRGP
Trigger: AGGACCTCTCCTGAGAGGCAAAACCTGTTGCCTCCA...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp ACTACACAGCTGACGGGCCTTGGCGGTAACCTTTGTGCCTTTTATCTTTCTCCTAAGAGTTCTGGGTGTTaGCTTCTCCTGCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: TTQLTGLGGNLCAFYLSPKSSGC*LLLLFV
Trigger: TACAAAGAGCAGGAGAAGCAAACACCCAGAACTCTT...AGGAGAAAGATAAAAGGCACAAAGGTTACCGCCAAGGCCCGTCAGCTGTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp ACTTCTGTCAGCTTTGGTGCTGACAGGCTCTATAGTTTTTGCACACTGAAACATTCCCACTTCCCCAATTaGGCCAAGCTTGGAATGAGC +
Preference number: 5 (lower is better)
Translates to: TSVSFGADRLYSFCTLKHSHFPN*AKLGMS
Trigger: GCTCATTCCAAGCTTGGCCAAATTGGGGAAGTGGGA...ATGTTTCAGTGTGCAAAAACTATAGAGCCTGTCAGCACCAAAGCTGACAGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGTGCGCAAAACCCACTTaGCCAGGGACAAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRACAKPT*PGTKMV
Trigger: CACCATCTTTGTCCCTGGCAAAGTGGGTTTTGCGCA...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621914.4
CDS-3UTR CAA 90 bp TGTCACCTGCATCAGTGCGATTTTATGTGTGGTCACTGGTATTCAGATGGAGCTACTTCTTTAGCTGTGTaGCCAAACTCAAGACCTGCT +
Preference number: 5 (lower is better)
Translates to: CHLHQCDFMCGHWYSDGATSLAV*PNSRPA
Trigger: AGCAGGTCTTGAGTTTGGCAACACAGCTAAAGAAGT...AGCTCCATCTGAATACCAGTGACCACACATAAAATCGCACTGATGCAGGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588116.1
CDS-3UTR CAA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGGGGAAGCATGAAGGCTaGGCCAAGGAAAAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRAGKHEG*AKEKEF
Trigger: AAACTCCTTTTCCTTGGCCAAGCCTTCATGCTTCCC...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp TCTGGGTTCTTGTTCCCCATCTCTACTCAAATTCCTGAATTAGTGGGATTAGCAGTGGGATTAGCAGGTTaGTTCAGGGGAAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SGFLFPISTQIPELVGLAVGLAG*FRGKER
Trigger: CCTTTCCTTTCCCCTGAACAAACCTGCTAATCCCAC...TGCTAATCCCACTAATTCAGGAATTTGAGTAGAGATGGGGAACAAGAACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp CAGTCTATTTTGTCCTTTACAAAAACGTTTGCCAACTCCTTAGATAGATGGTCATCATCCTTCAAGCACTaGCGGAGCGGCTCACAGAGA +
Preference number: 5 (lower is better)
Translates to: QSILSFTKTFANSLDRWSSSFKH*RSGSQR
Trigger: TCTCTGTGAGCCGCTCCGCAAGTGCTTGAAGGATGA...TGACCATCTATCTAAGGAGTTGGCAAACGTTTTTGTAAAGGACAAAATAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591610.5
CDS-3UTR CAA 90 bp CTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATACAGCATCTGGGTTCTaGTTCCCCATCTCTACTCAA +
Preference number: 5 (lower is better)
Translates to: LALPSSNSKDIQLPPDANTASGF*FPISTQ
Trigger: TTGAGTAGAGATGGGGAACAAGAACCCAGATGCTGT...ATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGAAACAGGCTGGTATTTaGGGCATGAAGCATTCTTTG +
Preference number: 5 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKKQAGI*GMKHSL
Trigger: CAAAGAATGCTTCATGCCCAAAATACCAGCCTGTTT...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGGGGTGTGGGGTAGTTTaGCTCTTGTTTTCCACGATT +
Preference number: 5 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRAGCGVV*LLFSTI
Trigger: AATCGTGGAAAACAAGAGCAAAACTACCCCACACCC...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp CTTCGAGTAATTCAAAAGATATTCAGCTGCCACCTGATGCCAATATACAGAGCGAACCTTCTGCACTACTaGTATCCACTGACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LRVIQKIFSCHLMPIYRANLLHY*YPLTPG
Trigger: TCCTGGAGTCAGTGGATACAAGTAGTGCAGAAGGTT...CGCTCTGTATATTGGCATCAGGTGGCAGCTGAATATCTTTTGAATTACTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp GCAACATCTCTAAGCTCACTTCATCTCTGCACCTATTCTGCTGGCCTCAATAAGTATTCTGATAGGAAATaGTGTTGTCTGCTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ATSLSSLHLCTYSAGLNKYSDRK*CCLLAL
Trigger: CAGGGCAAGCAGACAACACAATTTCCTATCAGAATA...CTTATTGAGGCCAGCAGAATAGGTGCAGAGATGAAGTGAGCTTAGAGATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS CCA 90 bp CTTTGGATCTTTAATGTGCACCTTACCAGCACGCTTAGTCATCACTaGAATGTCTTAACACGTTTTCTTATAGAGCTGCACCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LWIFNVHLTSTLSHH*NVLTRFLIELHLLH
Trigger: ATGAAGGAGGTGCAGCTCTATAAGAAAACGTGTTAAGACATTCCAGTGATGACTAAGCGTGCTGGTAAGGTGCACATTAAAGATCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590432.5
CDS-3UTR CAA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGAAACAGGCTGGTATTTaGGGCATGAAGCATTCTTTG +
Preference number: 5 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQKQAGI*GMKHSL
Trigger: CAAAGAATGCTTCATGCCCAAAATACCAGCCTGTTT...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS-3UTR CAA 90 bp ACACCTTCATTCTGGCATCTGGCTTTACCTTCGAGTAATTCAAAAGATATTCAGTATTCTGATAGGAAATaGTGTTGTCTGCTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: TPSFWHLALPSSNSKDIQYSDRK*CCLLAL
Trigger: CAGGGCAAGCAGACAACACAATTTCCTATCAGAATA...CTGAATATCTTTTGAATTACTCGAAGGTAAAGCCAGATGCCAGAATGAAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610402.5
ENST00000621914.4
CDS TCA 90 bp ATCTTCACAGTCCTCATTAATTTAAGCTTCCAGATACATTCTACATaGGCTCCAATCTTCCATGCTATTCCTTTCCTAAGTACAAATCTT +
Preference number: 5 (lower is better)
Translates to: IFTVLINLSFQIHST*APIFHAIPFLSTNL
Trigger: AAGATTTGTACTTAGGAAAGGAATAGCATGGAAGATTGGAGCTCATGTAGAATGTATCTGGAAGCTTAAATTAATGAGGACTGTGAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591561.5
CDS TCA 72 bp TCCCTTTGGCTTGCTGGACACGTCTCAGCCTCTCAGTaGACGACGCCGAGCGGGGAAGAAAGACGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: SLWLAGHVSASQ*TTPSGEERRFP
Trigger: GGGGAACCGTCTTTCTTCCCCGCTCGGCGTCGTTCACTGAGAGGCTGAGACGTGTCCAGCAAGCCAAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593014.3
CDS CCA 72 bp GATCTCTTGTCGCCTTCCAGACCCAAAGATTTCCTTTaGTCCCGGCAAGCTAGCCCATCTGGGCCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: DLLSPSRPKDFL*SRQASPSGPQR
Trigger: CCTCTGAGGCCCAGATGGGCTAGCTTGCCGGGACCAAAGGAAATCTTTGGGTCTGGAAGGCGACAAGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616784.4
CDS TCA 72 bp GCTCATTTTCCTTCCAGGCTCAAGGGCGGACAATGGTaGTATAGCCCAGGCCTATATACGGGCAGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: AHFPSRLKGGQW*YSPGLYTGSGA
Trigger: AGCCCCACTGCCCGTATATAGGCCTGGGCTATATCACCATTGTCCGCCCTTGAGCCTGGAAGGAAAATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616784.4
CDS GCA 72 bp GCTTTTCCCTCTCAATGGTCACACCCGACGGTTCCCTaGATCATCAACGGTCACGCTCTTAGGATTTCCTCG +
Preference number: 6 (lower is better)
Translates to: AFPSQWSHPTVP*IINGHALRISS
Trigger: CGAGGAAATCCTAAGAGCGTGACCGTTGATGATGCAGGGAACCGTCGGGTGTGACCATTGAGAGGGAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590432.5
CDS GCA 72 bp CCTTTTCCCTCTCAATGGTCACACCCGACGGTTCCCTaGATCATCAACGGTCACGCTCTTAGGATTTCCTCG +
Preference number: 6 (lower is better)
Translates to: PFPSQWSHPTVP*IINGHALRISS
Trigger: CGAGGAAATCCTAAGAGCGTGACCGTTGATGATGCAGGGAACCGTCGGGTGTGACCATTGAGAGGGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612116.5
ENST00000614600.4
ENST00000618940.4
CDS CCA 72 bp AAACCTTTGAGGGAATCCCTTTTCCCTTTGGCTTGCTaGACACGTCTCAGCCTCTCAGTGAACGACGCCGAG +
Preference number: 6 (lower is better)
Translates to: KPLRESLFPLAC*TRLSLSVNDAE
Trigger: CTCGGCGTCGTTCACTGAGAGGCTGAGACGTGTCCAGCAAGCCAAAGGGAAAAGGGATTCCCTCAAAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593014.3
CDS GCA 72 bp CCTGCCCGTCACGATTCTTTTCTAGGTCTAAGCCACTaGGCAAAACCCACTTTGCCAGGGACAAAGATGGTG +
Preference number: 6 (lower is better)
Translates to: PARHDSFLGLSH*AKPTLPGTKMV
Trigger: CACCATCTTTGTCCCTGGCAAAGTGGGTTTTGCGCAGTGGCTTAGACCTAGAAAAGAATCGTGACGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616784.4
ENST00000621914.4
CDS CAA 72 bp CCGAGAGACGACGTTCGCCCATCAATGAGCAAACCTTaGAGGGAATCCCTTTTCCCTTTGGCTTGCTGGACA +
Preference number: 6 (lower is better)
Translates to: PRDDVRPSMSKP*RESLFPLACWT
Trigger: TGTCCAGCAAGCCAAAGGGAAAAGGGATTCCCTCAAAGGTTTGCTCATTGATGGGCGAACGTCGTCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593014.3
CDS CAA 90 bp TCAAGTTACCCGAGAGACGACGTTCGCCCATCAATGAGCAAACCTTaGAGGGAATCCCTTTTCCCTTTGGCTTGCTGGACACGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: SSYPRDDVRPSMSKP*RESLFPLACWTRLS
Trigger: GCTGAGACGTGTCCAGCAAGCCAAAGGGAAAAGGGATTCCCTCAAAGGTTTGCTCATTGATGGGCGAACGTCGTCTCTCGGGTAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593014.3
CDS CCA 72 bp TTTAATGTGCACCTTACCAGCACGCTTAGTCATCACTaGAATGTCTTAACACGTTTTCTTATAGAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: FNVHLTSTLSHH*NVLTRFLIELH
Trigger: GTGCAGCTCTATAAGAAAACGTGTTAAGACATTCCAGTGATGACTAAGCGTGCTGGTAAGGTGCACATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590432.5
CDS TCA 72 bp ATCTTCTTCCACACAGGCAAATTTAGGTCTTCCTTGTaGTGTTCTCGAAAAAGGAACCTTGATTCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: IFFHTGKFRSSL*CSRKRNLDSLS
Trigger: ACTCAGAGAATCAAGGTTCCTTTTTCGAGAACATCACAAGGAAGACCTAAATTTGCCTGTGTGGAAGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587805.1