RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP2A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000183020, ENSG00000280759

Ensembl transcript IDs: ENST00000332231.9, ENST00000448903.7, ENST00000524559.1, ENST00000524952.2, ENST00000525891.5, ENST00000526376.1, ENST00000526753.5, ENST00000527024.1, ENST00000527917.1, ENST00000528195.5, ENST00000528815.5, ENST00000528816.1, ENST00000529427.1, ENST00000529818.5, ENST00000529858.5, ENST00000530801.5, ENST00000531497.1, ENST00000531548.5, ENST00000534328.5, ENST00000534485.5, ENST00000625319.2, ENST00000625408.2, ENST00000625638.1, ENST00000625721.1, ENST00000625871.2, ENST00000625985.1, ENST00000626013.2, ENST00000626063.2, ENST00000626227.1, ENST00000626578.2, ENST00000626736.1, ENST00000626739.2, ENST00000626787.2, ENST00000626798.2, ENST00000626884.1, ENST00000626889.2, ENST00000627250.2, ENST00000627507.2, ENST00000627628.1, ENST00000627737.2, ENST00000627987.2, ENST00000628071.1, ENST00000628115.2, ENST00000628187.2, ENST00000628226.2, ENST00000628454.1, ENST00000628599.2, ENST00000628913.1, ENST00000629905.1, ENST00000629923.2, ENST00000629940.2, ENST00000629952.2, ENST00000630212.2, ENST00000630345.2, ENST00000630411.1, ENST00000630448.2, ENST00000630879.1, ENST00000630894.1

Found 1097 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCAGCCACCAGGACGGCCACACACCAAGGCTCAGCCCACGCCATaGACAGTGGCACTGCTGCTCCCAGAGGCTCCGAGGCGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: VQPPGRPHTKAQPTP*TVALLLPEAPRRGG
Trigger: CCCACCCCGCCTCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGGGCTGAGCCTTGGTGTGTGGCCGTCCTGGTGGCTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp CAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTaGTGGCGGGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCAC +
Preference number: 1 (lower is better)
Translates to: QRRTGKRCLGEQPFL*WREGSRDAGDPRQH
Trigger: GTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 90 bp AGGGTCAGCTGTGCTCCTCCCAAGGGCCCAGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCACACACCAAGGCTCAGCCCACGCCAT +
Preference number: 1 (lower is better)
Translates to: RVSCAPPKGPGRRQV*SHQDGHTPRLSPRH
Trigger: ATGGCGTGGGCTGAGCCTTGGTGTGTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCCTGGGCCCTTGGGAGGAGCACAGCTGACCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR CCA 90 bp ACCACCCAGCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTaGCACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCA +
Preference number: 1 (lower is better)
Translates to: TTQLQHKPSTACHGT*HHQTQNGLCERRTP
Trigger: TGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGCTGGGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR CCA 90 bp AGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCACCGTaGCCTGGGGACGCCCACTCTGACAGGAAAGAGACGAGCACACCT +
Preference number: 1 (lower is better)
Translates to: RDDWTGPVEGLRPAP*PGDAHSDRKETSTP
Trigger: AGGTGTGCTCGTCTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp GGTGGAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTaGCAGGAAAGAGACGAGCACACCTCTGAGTCTTGCGCCACCGGC +
Preference number: 1 (lower is better)
Translates to: GGRTQACTVAWGRPL*QERDEHTSESCATG
Trigger: GCCGGTGGCGCAAGACTCAGAGGTGTGCTCGTCTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCAGAGCACTGCCCAGCAGCTGGAACA +
Preference number: 1 (lower is better)
Translates to: GGVKGCRRSTAAHAA*RRSTQAEHCPAAGT
Trigger: TGTTCCAGCTGCTGGGCAGTGCTCTGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp GGCCTGGGGACGCCCACTCTGACAGGAAAGAGACGAGCACACCTCTaGGTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: GLGTPTLTGKRRAHL*VLRHRPTLYPGVLG
Trigger: CCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGACTCAGAGGTGTGCTCGTCTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 90 bp GGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTaGTCCTCCCAAGGGCCCAGGACGACGCCAGGTGTGCAGCCACCA +
Preference number: 1 (lower is better)
Translates to: GKTVQLGLQQNQGQL*SSQGPRTTPGVQPP
Trigger: TGGTGGCTGCACACCTGGCGTCGTCCTGGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR CCA 90 bp CAGAACCTGTGCTGGGTGTGTTTAGGACAAACAAGGCCACCATCCTaGGGACAGAGCGCAAGGCCCCAGCCTTGGCTCCTAGGCCGGCCC +
Preference number: 1 (lower is better)
Translates to: QNLCWVCLGQTRPPS*GQSARPQPWLLGRP
Trigger: GGGCCGGCCTAGGAGCCAAGGCTGGGGCCTTGCGCTCTGTCCCCAGGATGGTGGCCTTGTTTGTCCTAAACACACCCAGCACAGGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTaGCTATGCTGTGATCAAAGCCCGACACGCCGGAAGAAGAGCCGC +
Preference number: 1 (lower is better)
Translates to: HQTQNGLCERRTPLT*LCCDQSPTRRKKSR
Trigger: GCGGCTCTTCTTCCGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp TCAGGTGTCAGACGTGCAGCCTGGGTGCTGAGTCCAGATGACAGGTaGGACACAAGCCGCAGGTGGCACATGGCATGCGGCCAATGGCCC +
Preference number: 1 (lower is better)
Translates to: SGVRRAAWVLSPDDR*DTSRRWHMACGQWP
Trigger: GGGCCATTGGCCGCATGCCATGTGCCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACCCAGGCTGCACGTCTGACACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp TCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCTGAGTCCAGATaGCAGGTGAGACACAAGCCGCAGGTGGCACATGGCATGCGGCCA +
Preference number: 1 (lower is better)
Translates to: SPLRCQTCSLGAESR*QVRHKPQVAHGMRP
Trigger: TGGCCGCATGCCATGTGCCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACCCAGGCTGCACGTCTGACACCTGAGAGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp CCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCTaGGTCCAGATGACAGGTGAGACACAAGCCGCAGGTGGCACATGG +
Preference number: 1 (lower is better)
Translates to: PHSLASQVSDVQPGC*VQMTGETQAAGGTW
Trigger: CCATGTGCCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp GGCACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTaGCGTGGCTATGCTGTGATCAAAGCCCGACACGCCGGAAGAAGA +
Preference number: 1 (lower is better)
Translates to: GTTRPRMACARGARH*RGYAVIKARHAGRR
Trigger: TCTTCTTCCGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 90 bp GGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTaGAGGAGCATAACAGACGCCCTTCACAAACAGGAGCTGGGAAAG +
Preference number: 1 (lower is better)
Translates to: GRTLLPWLHIQGLGD*RSITDALHKQELGK
Trigger: CTTTCCCAGCTCCTGTTTGTGAAGGGCGTCTGTTATGCTCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp GAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCTGTaGTCAAAGCCCGACACGCCGGAAGAAGAGCCGCAGACATTGTGG +
Preference number: 1 (lower is better)
Translates to: EWPVREAHATDVAML*SKPDTPEEEPQTLW
Trigger: CCACAATGTCTGCGGCTCTTCTTCCGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 90 bp GGCCAGGGTGAAAACCCTCAAGCACATGTGGCCACCCACCCTCCCTaGCTCCACAGCATGTCAGGAAGCCAGAACCTGTGCTGGGTGTGT +
Preference number: 1 (lower is better)
Translates to: GQGENPQAHVATHPP*LHSMSGSQNLCWVC
Trigger: ACACACCCAGCACAGGTTCTGGCTTCCTGACATGCTGTGGAGGCAGGGAGGGTGGGTGGCCACATGTGCTTGAGGGTTTTCACCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 90 bp ACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATaGTGTGATCAAAGCCCGACACGCCGGAAGAAGAGCCGCAGACAT +
Preference number: 1 (lower is better)
Translates to: TQNGLCERRTPLTWL*CDQSPTRRKKSRRH
Trigger: ATGTCTGCGGCTCTTCTTCCGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 90 bp TTGATCCCAAGATCCACCTTCTGCCGTGGCTGCCACAGTCCAGGCTaGGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: LIPRSTFCRGCHSPG*AFPPEPHTCVPVQP
Trigger: GGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGGGATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
3UTR CCA 90 bp ATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTaGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCA +
Preference number: 1 (lower is better)
Translates to: IWACRFGSKRSRHPI*VVFVWMIPAPTKFA
Trigger: TGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR CCA 90 bp TTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGTGGTTTTCGTGTaGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACT +
Preference number: 1 (lower is better)
Translates to: FGSKRSRHPIWVVFV*MIPAPTKFAGLGST
Trigger: AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR GCA 90 bp TCCAATGATCTTGGCTTTGGTGACTTCTGTGTCCATTGGGTGCTTTaGTTTGAAGATGTTCTGCACTTCCTGCTGTGGATTGCTCAACTG +
Preference number: 1 (lower is better)
Translates to: SNDLGFGDFCVHWVL*FEDVLHFLLWIAQL
Trigger: CAGTTGAGCAATCCACAGCAGGAAGTGCAGAACATCTTCAAAGCAAAGCACCCAATGGACACAGAAGTCACCAAAGCCAAGATCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR GCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTaGAGAACCAAATCCAATGATCTTGGCTTTGGTGACTTCTGTGTC +
Preference number: 1 (lower is better)
Translates to: SSHEIRRIRINFFKK*RTKSNDLGFGDFCV
Trigger: GACACAGAAGTCACCAAAGCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCGCAAGGCCCCAGCCTTaGCTCCTAGGCCGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSARPQP*LLGRPH
Trigger: GTGGGGCCGGCCTAGGAGCCAAGGCTGGGGCCTTGC...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCAC +
Preference number: 2 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGGRRQV*SHQDGH
Trigger: GTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCA +
Preference number: 2 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSAAHAA*RRSTQA
Trigger: TGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGC...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGTTTACCCTGGAGTCCTaGGGGCCCTGCGGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRFTLES*GPCGAG
Trigger: GCCGGCCCCGCAGGGCCCCCAGGACTCCAGGGTAAA...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGGGAAGGACTCAGGCCTaGACCGTGGCCTGGGGACGC +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRGRTQA*TVAWGR
Trigger: GCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTCC...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGCAAGGCCCCAGCCTTaGCTCCTAGGCCGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRARPQP*LLGRPH
Trigger: GTGGGGCCGGCCTAGGAGCCAAGGCTGGGGCCTTGC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTaGTGGCGGGAGGGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGEQPFL*WREGSR
Trigger: CCTTGACCCCTCCCGCCATCAGAGGAAAGGCTGCTC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCAC +
Preference number: 2 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVGRRQV*SHQDGH
Trigger: GTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCC...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCAGGTGGCACATGGCATaGGGCCAATGGCCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSRWHMA*GQWPLH
Trigger: GTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCT...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGGCCACACCACCCAGCTaGAGCACAAGCCCAGCACGG +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRATPPS*STSPAR
Trigger: CCGTGCTGGGCTTGTGCTGCAGCTGGGTGGTGTGGC...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCA +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRAAHAA*RRSTQA
Trigger: TGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGC...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCCACGCCATGCACAGTaGCACTGCTGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGPRHAQ*HCCSQR
Trigger: CCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGAACCAGGGTCAGCTGTaGTCCTCCCAAGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRNQGQL*SSQGPR
Trigger: CCTGGGCCCTTGGGAGGAGCACAGCTGACCCTGGTT...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGCCACACCACCCAGCTaGAGCACAAGCCCAGCACGG +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRATPPS*STSPAR
Trigger: CCGTGCTGGGCTTGTGCTGCAGCTGGGTGGTGTGGC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACCACGCCATGCACAGTaGCACTGCTGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: PAGRSSPGCTSKASATAGPRHAQ*HCCSQR
Trigger: CCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCAACTGGACGGGGCCGGTaGAAGGACTCAGGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPTGRGR*KDSGLH
Trigger: GTGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGT...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGACACAAGCCGCAGGTaGCACATGGCATGCGGCCAA +
Preference number: 2 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGDTSRR*HMACGQ
Trigger: TTGGCCGCATGCCATGTGCCACCTGCGGCTTGTGTC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGACCCTCAAGCACATGTaGCCACCCACCCTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRTLKHM*PPTLPA
Trigger: GGCAGGGAGGGTGGGTGGCCACATGTGCTTGAGGGT...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACATGCACAGTGGCACTaGTGCTCCCAGAGGCTCCGA +
Preference number: 2 (lower is better)
Translates to: PAGRSSPGCTSKASATAGHAQWH*CSQRLR
Trigger: TCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGAACCAGGGTCAGCTGTaGTCCTCCCAAGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVNQGQL*SSQGPR
Trigger: CCTGGGCCCTTGGGAGGAGCACAGCTGACCCTGGTT...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCCAGTCCAGCTGGGACTaGAGCAAAACCAGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGQSSWD*SKTRVS
Trigger: GCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTG...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGCTCAGGTGTCAGACGTaGAGCCTGGGTGCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRLRCQT*SLGAES
Trigger: GGACTCAGCACCCAGGCTGCACGTCTGACACCTGAG...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGTGGGGTGCACACACTaGAGGGGAGCTGTGGAGACC +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRVGCTH*RGAVET
Trigger: GGTCTCCACAGCTCCCCTGCAGTGTGTGCACCCCAC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCA +
Preference number: 2 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMAAHAA*RRSTQA
Trigger: TGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGC...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCACCACGCCATGCACAGTaGCACTGCTGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPPRHAQ*HCCSQR
Trigger: CCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGG...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCCTCAGGCCTGCACCGTaGCCTGGGGACGCCCACTCT +
Preference number: 2 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCLRPAP*PGDAHS
Trigger: AGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAG...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTACCCTCCAGGGACGACTaGACGGGGCCGGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLPSRDD*TGPVEG
Trigger: TCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGG...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCAACCCTCAAGCACATGTaGCCACCCACCCTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPTLKHM*PPTLPA
Trigger: GGCAGGGAGGGTGGGTGGCCACATGTGCTTGAGGGT...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCCCACCAGACCCAGAATaGCCTGTGCGAGAGGCGCAC +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRPPDPE*PVREAH
Trigger: GTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGG...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCACACGGGCCATCTCAGTaGCACTCCCACAAACGCCAC +
Preference number: 2 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPHGPSQ*HSHKRH
Trigger: GTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTG...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGTGCAGCCTGGGTGCTaGGTCCAGATGACAGGTGAG +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRVQPGC*VQMTGE
Trigger: CTCACCTGTCATCTGGACTCAGCACCCAGGCTGCAC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGACGTGGCTATGCTGTaGTCAAAGCCCGACACGCCG +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRDVAML*SKPDTP
Trigger: CGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCCAAGGCCTCGGCGACTaGAGGAGCATAACAGACGCC +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRQGLGD*RSITDA
Trigger: GGCGTCTGTTATGCTCCTGCAGTCGCCGAGGCCTTG...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCAGGTGGCACATGGCATaGGGCCAATGGCCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRRWHMA*GQWPLH
Trigger: GTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCT...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCAATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGTTTACCCTGGAGTCCTaGGGGCCCTGCGGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMFTLES*GPCGAG
Trigger: GCCGGCCCCGCAGGGCCCCCAGGACTCCAGGGTAAA...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGCGTGTCACGGCACCTaGCACCACCAGACCCAGAAT +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRACHGT*HHQTQN
Trigger: ATTCTGGGTCTGGTGGTGCCAGGTGCCGTGACACGC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGGTGCTGAGTCCAGATaGCAGGTGAGACACAAGCCG +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRGAESR*QVRHKP
Trigger: CGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCCCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGCATGCACAGTGGCACTaGTGCTCCCAGAGGCTCCGA +
Preference number: 2 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMHAQWH*CSQRLR
Trigger: TCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATG...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCACACACCTCTGAGTCTTaGGCCACCGGCCCACACTTT +
Preference number: 2 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPHTSES*ATGPHF
Trigger: AAAGTGTGGGCCGGTGGCGCAAGACTCAGAGGTGTG...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCCACACCTCTGAGTCTTaGGCCACCGGCCCACACTTT +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRHTSES*ATGPHF
Trigger: AAAGTGTGGGCCGGTGGCGCAAGACTCAGAGGTGTG...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGGAGGGGTCAAGGGATaGAGGAGATCCACGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMGGVKG*RRSTAA
Trigger: TGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGCTCAGGCCTGCACCGTaGCCTGGGGACGCCCACTCT +
Preference number: 2 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMLRPAP*PGDAHS
Trigger: AGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAG...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGTCAGACGTGCAGCCTaGGTGCTGAGTCCAGATGAC +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRVRRAA*VLSPDD
Trigger: GTCATCTGGACTCAGCACCCAGGCTGCACGTCTGAC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGCACGGGCCATCTCAGTaGCACTCCCACAAACGCCAC +
Preference number: 2 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKEHGPSQ*HSHKRH
Trigger: GTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTG...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGCCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 2 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCCATGCACAGTGGCACTaGTGCTCCCAGAGGCTCCGA +
Preference number: 2 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCHAQWH*CSQRLR
Trigger: TCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATG...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGCAAGGCCTCGGCGACTaGAGGAGCATAACAGACGCC +
Preference number: 2 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKEQGLGD*RSITDA
Trigger: GGCGTCTGTTATGCTCCTGCAGTCGCCGAGGCCTTG...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCAGGTGGCACATGGCATaGGGCCAATGGCCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCRWHMA*GQWPLH
Trigger: GTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCT...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGCCACTGACGTGGCTATaGTGTGATCAAAGCCCGACA +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRPLTWL*CDQSPT
Trigger: TGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGG...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATACTGGACGGGGCCGGTaGAAGGACTCAGGCCTGCAC +
Preference number: 2 (lower is better)
Translates to: QGPAQQATEGQGENPQAHTGRGR*KDSGLH
Trigger: GTGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGT...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAGAGCCGCAGACATTGTaGGGTGCACACACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLEPQTL*GAHTAG
Trigger: CCCTGCAGTGTGTGCACCCCACAATGTCTGCGGCTC...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAAGTCCAGATGACAGGTaGGACACAAGCCGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLSPDDR*DTSRRW
Trigger: CCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACT...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 2 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCCAGTCCAGCTGGGACTaGAGCAAAACCAGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCQSSWD*SKTRVS
Trigger: GCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTG...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCATCCGGCCAGGACACGTaGTTTTGCCAGAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPASGQDT*FCQKSL
Trigger: TAATGACTTCTGGCAAAAGCACGTGTCCTGGCCGGA...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTACACACCTCTGAGTCTTaGGCCACCGGCCCACACTTT +
Preference number: 2 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLHTSES*ATGPHF
Trigger: AAAGTGTGGGCCGGTGGCGCAAGACTCAGAGGTGTG...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCACCACTGACGTGGCTATaGTGTGATCAAAGCCCGACA +
Preference number: 2 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPPLTWL*CDQSPT
Trigger: TGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGG...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGAGGACGCTCCTCCCCTaGCTGCACATCCAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMRTLLP*LHIQGL
Trigger: GAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCT...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCATGGCATGCGGCCAATaGCCCCTTCACTTCCTGACC +
Preference number: 2 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCMACGQ*PLHFLT
Trigger: GGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCAT...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCCTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCLSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACACGGGCCATCTCAGTaGCACTCCCACAAACGCCAC +
Preference number: 2 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPHGPSQ*HSHKRH
Trigger: GTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGTGGGGACGCCCACTCTaGCAGGAAAGAGACGAGCAC +
Preference number: 2 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEWGRPL*QERDEH
Trigger: GTGCTCGTCTCTTTCCTGTCAGAGTGGGCGTCCCCA...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGTGCAGCCTGGGTGCTaGGTCCAGATGACAGGTGAG +
Preference number: 2 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMVQPGC*VQMTGE
Trigger: CTCACCTGTCATCTGGACTCAGCACCCAGGCTGCAC...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGCATGCACAGTGGCACTaGTGCTCCCAGAGGCTCCGA +
Preference number: 2 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMHAQWH*CSQRLR
Trigger: TCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATG...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCAC +
Preference number: 2 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRGRRQV*SHQDGH
Trigger: GTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGTCCGGCCAGGACACGTaGTTTTGCCAGAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVSGQDT*FCQKSL
Trigger: TAATGACTTCTGGCAAAAGCACGTGTCCTGGCCGGA...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACGGTACATCTGGGCTTaGAGGTTCGGCTCCAAGCGC +
Preference number: 2 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPRYIWA*RFGSKR
Trigger: GCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGACACAAGCCGCAGGTaGCACATGGCATGCGGCCAA +
Preference number: 2 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMDTSRR*HMACGQ
Trigger: TTGGCCGCATGCCATGTGCCACCTGCGGCTTGTGTC...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCCCCCCATACCTGAACTaGATGTTGAGGACTGGCGCC +
Preference number: 2 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIPPYLN*MLRTGA
Trigger: GGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGG...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 2 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGCAGTCCAGCTGGGACTaGAGCAAAACCAGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEQSSWD*SKTRVS
Trigger: GCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTG...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGTCAGACGTGCAGCCTaGGTGCTGAGTCCAGATGAC +
Preference number: 2 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMVRRAA*VLSPDD
Trigger: GTCATCTGGACTCAGCACCCAGGCTGCACGTCTGAC...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPLSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCAGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCAC +
Preference number: 2 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSGRRQV*SHQDGH
Trigger: GTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCC...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCCTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGA +
Preference number: 2 (lower is better)
Translates to: SRYIWACRFGSKRSRHPILNVED*RLREVG
Trigger: TCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAG...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGCTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGA +
Preference number: 2 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLLNVED*RLREVG
Trigger: TCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAG...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACAGGACACGTGCTTTTaGCAGAAGTCATTACAAATA +
Preference number: 2 (lower is better)
Translates to: PAGRSSPGCTSKASATAGQDTCF*QKSLQI
Trigger: TATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGCAGGACACGTGCTTTTaGCAGAAGTCATTACAAATA +
Preference number: 2 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRQDTCF*QKSLQI
Trigger: TATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTG...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCAGCCAGAACCTGTGCTaGGTGTGTTTAGGACAAACA +
Preference number: 2 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCSQNLC*VCLGQT
Trigger: TGTTTGTCCTAAACACACCCAGCACAGGTTCTGGCT...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCATGGGTGGTTTTCGTGTaGATGATTCCAGCTCCCACG +
Preference number: 2 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPWVVFV*MIPAPT
Trigger: CGTGGGAGCTGGAATCATCCACACGAAAACCACCCA...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGCACGGGCCATCTCAGTaGCACTCCCACAAACGCCAC +
Preference number: 2 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKHGPSQ*HSHKRH
Trigger: GTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTG...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 2 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCCAGGACACGTGCTTTTaGCAGAAGTCATTACAAATA +
Preference number: 2 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRQDTCF*QKSLQI
Trigger: TATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTG...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATTCCGGCCAGGACACGTaGTTTTGCCAGAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: QGPAQQATEGQGENPQAHSGQDT*FCQKSL
Trigger: TAATGACTTCTGGCAAAAGCACGTGTCCTGGCCGGA...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCACCACGCCATGCACAGTaGCACTGCTGCTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSPRHAQ*HCCSQR
Trigger: CCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGG...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTCTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: NPAWENSPAGTAAKPGSALSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCAGGTTCAGGTTAGGCTaGAGGTCGTCTGAACAGATT +
Preference number: 2 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIRFRLG*RSSEQI
Trigger: AATCTGTTCAGACGACCTTCAGCCTAACCTGAACCT...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGAGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 2 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGTGGTTTTCGTGTGGATaGTTCCAGCTCCCACGAAAT +
Preference number: 2 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLWFSCG*FQLPRN
Trigger: ATTTCGTGGGAGCTGGAATCATCCACACGAAAACCA...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGTTTTCGTGTGGATaGTTCCAGCTCCCACGAAAT +
Preference number: 2 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIWFSCG*FQLPRN
Trigger: ATTTCGTGGGAGCTGGAATCATCCACACGAAAACCA...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATCTAGATTAAAATCCTaGCTGGGAAAACAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLSRLKS*LGKQSS
Trigger: GCTGGACTGTTTTCCCAGGCAGGATTTTAATCTAGA...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGAGCCAGAACCTGTGCTaGGTGTGTTTAGGACAAACA +
Preference number: 2 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMSQNLC*VCLGQT
Trigger: TGTTTGTCCTAAACACACCCAGCACAGGTTCTGGCT...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGTTGGGTGCTTTGCTTTaGAGATGTTCTGCACTTCCT +
Preference number: 2 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWLGALL*RCSALP
Trigger: AGGAAGTGCAGAACATCTTCAAAGCAAAGCACCCAA...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCGCCATTTCTGTCGGCTaGAAGAATTTGTTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIAISVG*KNLLRV
Trigger: CACTCTCAACAAATTCTTCCAGCCGACAGAAATGGC...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCCATTTCTGTCGGCTaGAAGAATTTGTTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWAISVG*KNLLRV
Trigger: CACTCTCAACAAATTCTTCCAGCCGACAGAAATGGC...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 2 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGTCTAGATTAAAATCCTaGCTGGGAAAACAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTESRLKS*LGKQSS
Trigger: GCTGGACTGTTTTCCCAGGCAGGATTTTAATCTAGA...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR TCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCCTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRILSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGACTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGLSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGTGGTTTTCGTGTGGATaGTTCCAGCTCCCACGAAAT +
Preference number: 2 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRWFSCG*FQLPRN
Trigger: ATTTCGTGGGAGCTGGAATCATCCACACGAAAACCA...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp GAGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATGTAAAGTTTAGGAACTaGGTGGAGGTCTTATTACCA +
Preference number: 2 (lower is better)
Translates to: EPVHLGLQVRLQAQQASNVKFRN*VEVLLP
Trigger: TGGTAATAAGACCTCCACGCAGTTCCTAAACTTTAC...ATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTCCCCCATACCTGAACTaGATGTTGAGGACTGGCGCC +
Preference number: 2 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTPPYLN*MLRTGA
Trigger: GGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGG...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGATCCGACCTAAATTCTaGCGAAATTCAGACTTAAGT +
Preference number: 2 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLIRPKF*RNSDLS
Trigger: ACTTAAGTCTGAATTTCGGCAGAATTTAGGTCGGAT...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACGTAAAGTTTAGGAACTaGGTGGAGGTCTTATTACCA +
Preference number: 2 (lower is better)
Translates to: APIPELNVEDWRLREVGHVKFRN*VEVLLP
Trigger: TGGTAATAAGACCTCCACGCAGTTCCTAAACTTTAC...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAGTTTAGGAACTGCGTaGAGGTCTTATTACCATAAA +
Preference number: 2 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPSLGTA*RSYYHK
Trigger: TTTATGGTAATAAGACCTCCACGCAGTTCCTAAACT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGCCATTTCTGTCGGCTaGAAGAATTTGTTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRAISVG*KNLLRV
Trigger: CACTCTCAACAAATTCTTCCAGCCGACAGAAATGGC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp GGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATGATCTTGGCTTTGGTGCCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 2 (lower is better)
Translates to: GSTSSRSAEPNPMILALVPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...CACCAAAGCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCTAGATTAAAATCCTaGCTGGGAAAACAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKSRLKS*LGKQSS
Trigger: GCTGGACTGTTTTCCCAGGCAGGATTTTAATCTAGA...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCAGGACACGTGCTTTTaGCAGAAGTCATTACAAATA +
Preference number: 2 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRQDTCF*QKSLQI
Trigger: TATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR GCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCATGTTCTGCACTTCCTaGTGTGGATTGCTCAACTGC +
Preference number: 2 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRIMFCTS*CGLLNC
Trigger: GCAGTTGAGCAATCCACAGCAGGAAGTGCAGAACAT...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp AGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATGATCTTGGCATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RIRINFFKKCRTKSNDLGIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...GCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp TCCAATGATCTTGGCTTTGGTGACTTCTGTGTCCATTGGGTGCTTTGCTTTGAATGCACAGACACGTTCTaGAAGGTGCCCCCATACCTG +
Preference number: 2 (lower is better)
Translates to: SNDLGFGDFCVHWVLCFECTDTF*KVPPYL
Trigger: CAGGTATGGGGGCACCTTCCAGAACGTGTCTGTGCA...TTCAAAGCAAAGCACCCAATGGACACAGAAGTCACCAAAGCCAAGATCATTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGAGTTTAGGAACTGCGTaGAGGTCTTATTACCATAAA +
Preference number: 2 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRSLGTA*RSYYHK
Trigger: TTTATGGTAATAAGACCTCCACGCAGTTCCTAAACT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp GGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATGATCTTGGCTTTGGTGCTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGA +
Preference number: 2 (lower is better)
Translates to: GSTSSRSAEPNPMILALVLNVED*RLREVG
Trigger: TCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAG...CACCAAAGCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR CAA 90 bp ATGATCTTGGCTTTGGTGACTTCTGTGTCCATTGGGTGCTTTGCTTaGAAGATGTTCTGCACTTCCTGCTGTGGATTGCTCAACTGCTTC +
Preference number: 2 (lower is better)
Translates to: MILALVTSVSIGCFA*KMFCTSCCGLLNCF
Trigger: GAAGCAGTTGAGCAATCCACAGCAGGAAGTGCAGAACATCTTCAAAGCAAAGCACCCAATGGACACAGAAGTCACCAAAGCCAAGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCATGTTCTGCACTTCCTaGTGTGGATTGCTCAACTGC +
Preference number: 2 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTMFCTS*CGLLNC
Trigger: GCAGTTGAGCAATCCACAGCAGGAAGTGCAGAACAT...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp AACTTCTTCAAGAAGTGCAGAACCAAATCCAATGATCTTGGCTTTGGTGACTTCTGCACAGACACGTTCTaGAAGGTGCCCCCATACCTG +
Preference number: 2 (lower is better)
Translates to: NFFKKCRTKSNDLGFGDFCTDTF*KVPPYL
Trigger: CAGGTATGGGGGCACCTTCCAGAACGTGTCTGTGCA...GAAGTCACCAAAGCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCGTAAAGTTTAGGAACTaGGTGGAGGTCTTATTACCA +
Preference number: 2 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRIVKFRN*VEVLLP
Trigger: TGGTAATAAGACCTCCACGCAGTTCCTAAACTTTAC...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAGTTTAGGAACTGCGTaGAGGTCTTATTACCATAAA +
Preference number: 2 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRISLGTA*RSYYHK
Trigger: TTTATGGTAATAAGACCTCCACGCAGTTCCTAAACT...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR TCA 90 bp GGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATGATCTTGGCTTTGGTGTTGGGTGCTTTGCTTTaGAGATGTTCTGCACTTCCT +
Preference number: 2 (lower is better)
Translates to: GSTSSRSAEPNPMILALVLGALL*RCSALP
Trigger: AGGAAGTGCAGAACATCTTCAAAGCAAAGCACCCAA...CACCAAAGCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTATCCGACCTAAATTCTaGCGAAATTCAGACTTAAGT +
Preference number: 2 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTIRPKF*RNSDLS
Trigger: ACTTAAGTCTGAATTTCGGCAGAATTTAGGTCGGAT...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp GAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATATGTTCTGCACTTCCTaGTGTGGATTGCTCAACTGC +
Preference number: 2 (lower is better)
Translates to: EIRRIRINFFKKCRTKSNMFCTS*CGLLNC
Trigger: GCAGTTGAGCAATCCACAGCAGGAAGTGCAGAACAT...ATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp AAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATGGCTTTGAAGATGTTCTaGACTTCCTGCTGTGGATTG +
Preference number: 2 (lower is better)
Translates to: KFAGLGSTSSRSAEPNPMALKMF*TSCCGL
Trigger: CAATCCACAGCAGGAAGTGCAGAACATCTTCAAAGC...CATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR GCA 90 bp AACTTCTTCAAGAAGTGCAGAACCAAATCCAATGATCTTGGCTTTGGTGACTTCATCCGACCTAAATTCTaGCGAAATTCAGACTTAAGT +
Preference number: 2 (lower is better)
Translates to: NFFKKCRTKSNDLGFGDFIRPKF*RNSDLS
Trigger: ACTTAAGTCTGAATTTCGGCAGAATTTAGGTCGGAT...GAAGTCACCAAAGCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCCGCAAGGCCCCAGCCTaGGCTCCTAGGCCGGCCCCA +
Preference number: 3 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSRKAPA*APRPAP
Trigger: TGGGGCCGGCCTAGGAGCCAAGGCTGGGGCCTTGCG...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR CCA 72 bp TCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTaGGGGCCCTGCGGGGCCGGCAGGACGCTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: SCATGPHFTLES*GPCGAGRTLLP
Trigger: GGGGAGGAGCGTCCTGCCGGCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 72 bp ACACCAAGGCTCAGCCCACGCCATGCACAGTGGCACTaGTGCTCCCAGAGGCTCCGAGGCGGGGTGGGCGGC +
Preference number: 3 (lower is better)
Translates to: TPRLSPRHAQWH*CSQRLRGGVGG
Trigger: GCCGCCCACCCCGCCTCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGGGCTGAGCCTTGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CAA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGCGCAAGGCCCCAGCCTaGGCTCCTAGGCCGGCCCCA +
Preference number: 3 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMRKAPA*APRPAP
Trigger: TGGGGCCGGCCTAGGAGCCAAGGCTGGGGCCTTGCG...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 72 bp CCAGGACGGCCACACACCAAGGCTCAGCCCACGCCATaGACAGTGGCACTGCTGCTCCCAGAGGCTCCGAGG +
Preference number: 3 (lower is better)
Translates to: PGRPHTKAQPTP*TVALLLPEAPR
Trigger: CCTCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGGGCTGAGCCTTGGTGTGTGGCCGTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 72 bp CCGAGGCGGGGTGGGCGGCAGCACGGGCCATCTCAGTaGCACTCCCACAAACGCCACGTTCACGCCAACTTC +
Preference number: 3 (lower is better)
Translates to: PRRGGRQHGPSQ*HSHKRHVHANF
Trigger: GAAGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCCGCCCACCCCGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR CCA 72 bp CTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTaGCACCACCAGACCCAGAATGGCCTGTGCGAGAGG +
Preference number: 3 (lower is better)
Translates to: LQHKPSTACHGT*HHQTQNGLCER
Trigger: CCTCTCGCACAGGCCATTCTGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 72 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTaGTCCTCCCAAGGGCCCAGGACGACGCCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: VQLGLQQNQGQL*SSQGPRTTPGV
Trigger: CACACCTGGCGTCGTCCTGGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 72 bp AAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCAGAGCACTGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: KGCRRSTAAHAA*RRSTQAEHCPA
Trigger: TGCTGGGCAGTGCTCTGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CAA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGAAGAGCCGCAGACATaGTGGGGTGCACACACTGCA +
Preference number: 3 (lower is better)
Translates to: GGVKGCRRSTAAHAACRREEPQT*WGAHTA
Trigger: TGCAGTGTGTGCACCCCACAATGTCTGCGGCTCTTC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 72 bp ACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTaGTGGCGGGAGGGGTCAAGGGATGCAGGAGATCCA +
Preference number: 3 (lower is better)
Translates to: TGKRCLGEQPFL*WREGSRDAGDP
Trigger: TGGATCTCCTGCATCCCTTGACCCCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 72 bp GGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATaGTGTGATCAAAGCCCGACACGCCGGAAGAAGAGC +
Preference number: 3 (lower is better)
Translates to: GLCERRTPLTWL*CDQSPTRRKKS
Trigger: GCTCTTCTTCCGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 72 bp ACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTaGCAGGAAAGAGACGAGCACACCTCTGAGTCTTGC +
Preference number: 3 (lower is better)
Translates to: TQACTVAWGRPL*QERDEHTSESC
Trigger: GCAAGACTCAGAGGTGTGCTCGTCTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 72 bp AGACGTGCAGCCTGGGTGCTGAGTCCAGATGACAGGTaGGACACAAGCCGCAGGTGGCACATGGCATGCGGC +
Preference number: 3 (lower is better)
Translates to: RRAAWVLSPDDR*DTSRRWHMACG
Trigger: GCCGCATGCCATGTGCCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACCCAGGCTGCACGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 72 bp CGACACGCCGGAAGAAGAGCCGCAGACATTGTGGGGTaGACACACTGCAGGGGAGCTGTGGAGACCCTGATG +
Preference number: 3 (lower is better)
Translates to: RHAGRRAADIVG*THCRGAVETLM
Trigger: CATCAGGGTCTCCACAGCTCCCCTGCAGTGTGTGCACCCCACAATGTCTGCGGCTCTTCTTCCGGCGTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR CCA 72 bp CAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTaGCTATGCTGTGATCAAAGCCCGACACGCCGGAAG +
Preference number: 3 (lower is better)
Translates to: QNGLCERRTPLT*LCCDQSPTRRK
Trigger: CTTCCGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CAA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCCAGGACACGTGCTTTaGCCAGAAGTCATTACAAAT +
Preference number: 3 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGPGHVL*PEVITN
Trigger: ATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTGG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CAA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGGTCGGGTCCACGGGCTaGGTCTGCAGGTTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGVGSTG*VCRFRL
Trigger: TAACCTGAACCTGCAGACCAAGCCCGTGGACCCGAC...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GAGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATGTCGGGTCCACGGGCTaGGTCTGCAGGTTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: EPVHLGLQVRLQAQQASNVGSTG*VCRFRL
Trigger: TAACCTGAACCTGCAGACCAAGCCCGTGGACCCGAC...ATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR TCA 72 bp AGGTGTCAGACGTGCAGCCTGGGTGCTGAGTCCAGATaGCAGGTGAGACACAAGCCGCAGGTGGCACATGGC +
Preference number: 3 (lower is better)
Translates to: RCQTCSLGAESR*QVRHKPQVAHG
Trigger: GCCATGTGCCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACCCAGGCTGCACGTCTGACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR TCA 72 bp CTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCTaGGTCCAGATGACAGGTGAGACACAAGCCGCAGGT +
Preference number: 3 (lower is better)
Translates to: LASQVSDVQPGC*VQMTGETQAAG
Trigger: ACCTGCGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACCCAGGCTGCACGTCTGACACCTGAGAGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 72 bp CTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTaGAGGAGCATAACAGACGCCCTTCACAAACAGGAG +
Preference number: 3 (lower is better)
Translates to: LLPWLHIQGLGD*RSITDALHKQE
Trigger: CTCCTGTTTGTGAAGGGCGTCTGTTATGCTCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CAA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGCCAGGACACGTGCTTTaGCCAGAAGTCATTACAAAT +
Preference number: 3 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRPGHVL*PEVITN
Trigger: ATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTGG...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR GCA 72 bp GAAAACCCTCAAGCACATGTGGCCACCCACCCTCCCTaGCTCCACAGCATGTCAGGAAGCCAGAACCTGTGC +
Preference number: 3 (lower is better)
Translates to: ENPQAHVATHPP*LHSMSGSQNLC
Trigger: GCACAGGTTCTGGCTTCCTGACATGCTGTGGAGGCAGGGAGGGTGGGTGGCCACATGTGCTTGAGGGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CAA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGTCGGCTGGAAGAATTaGTTGAGAGTGATGGGCAGC +
Preference number: 3 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLVGWKN*LRVMGS
Trigger: GCTGCCCATCACTCTCAACAAATTCTTCCAGCCGAC...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GAGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATGTCGGCTGGAAGAATTaGTTGAGAGTGATGGGCAGC +
Preference number: 3 (lower is better)
Translates to: EPVHLGLQVRLQAQQASNVGWKN*LRVMGS
Trigger: GCTGCCCATCACTCTCAACAAATTCTTCCAGCCGAC...ATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR CCA 72 bp TGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTaGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACG +
Preference number: 3 (lower is better)
Translates to: CRFGSKRSRHPI*VVFVWMIPAPT
Trigger: CGTGGGAGCTGGAATCATCCACACGAAAACCACCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGACTTCCTGCTGTGGATaGCTCAACTGCTTCCAACGT +
Preference number: 3 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLTSCCG*LNCFQR
Trigger: ACGTTGGAAGCAGTTGAGCAATCCACAGCAGGAAGT...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR CCA 72 bp TGCCTCCACAGCATGTCAGGAAGCCAGAACCTGTGCTaGGTGTGTTTAGGACAAACAAGGCCACCATCCTGG +
Preference number: 3 (lower is better)
Translates to: CLHSMSGSQNLC*VCLGQTRPPSW
Trigger: CCAGGATGGTGGCCTTGTTTGTCCTAAACACACCCAGCACAGGTTCTGGCTTCCTGACATGCTGTGGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR CCA 72 bp GAAGGTGCCCCCATACCTGAACTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGACACGCACTCTATGTT +
Preference number: 3 (lower is better)
Translates to: EGAPIPELNVED*RLREVGHALYV
Trigger: AACATAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGCACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGCCAAATCCAATGATCTaGGCTTTGGTGACTTCTGTG +
Preference number: 3 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLPNPMI*ALVTSV
Trigger: CACAGAAGTCACCAAAGCCAAGATCATTGGATTTGG...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GAGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCCAAATCCAATGATCTaGGCTTTGGTGACTTCTGTG +
Preference number: 3 (lower is better)
Translates to: EPVHLGLQVRLQAQQASNPNPMI*ALVTSV
Trigger: CACAGAAGTCACCAAAGCCAAGATCATTGGATTTGG...ATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR CCA 72 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTaGTCTTCCATCCTCAGGACTAAAACTGCGCTGAGA +
Preference number: 3 (lower is better)
Translates to: TAQTKTTQDTRA*SSILRTKTALR
Trigger: TCTCAGCGCAGTTTTAGTCCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGAGACTTAAGTCCAATTaGAAGCAGCTGGTTTTCAAA +
Preference number: 3 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWRLKSN*KQLVFK
Trigger: TTTGAAAACCAGCTGCTTCAAATTGGACTTAAGTCT...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGAGTCGGCTGGAAGAATTaGTTGAGAGTGATGGGCAGC +
Preference number: 3 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGVGWKN*LRVMGS
Trigger: GCTGCCCATCACTCTCAACAAATTCTTCCAGCCGAC...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR CCA 72 bp AAGCGCAGCAGGCATCCAATCTGGGTGGTTTTCGTGTaGATGATTCCAGCTCCCACGAAATTCGCAGGATTA +
Preference number: 3 (lower is better)
Translates to: KRSRHPIWVVFV*MIPAPTKFAGL
Trigger: TAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCAGATTGGATGCCTGCTGCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp AACTTCTTCAAGAAGTGCAGAACCAAATCCAATGATCTTGGCTTTGGTGACTTCGTCGGGTCCACGGGCTaGGTCTGCAGGTTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: NFFKKCRTKSNDLGFGDFVGSTG*VCRFRL
Trigger: TAACCTGAACCTGCAGACCAAGCCCGTGGACCCGAC...GAAGTCACCAAAGCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGAGACTTAAGTCCAATTaGAAGCAGCTGGTTTTCAAA +
Preference number: 3 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRRLKSN*KQLVFK
Trigger: TTTGAAAACCAGCTGCTTCAAATTGGACTTAAGTCT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGACAACTGCTTCCAACGTaGAAAGAAATCCTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGQLLPT*KEILRS
Trigger: GCTTCTCAGGATTTCTTTCAACGTTGGAAGCAGTTG...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCACTTCCTGCTGTGGATaGCTCAACTGCTTCCAACGT +
Preference number: 3 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTTSCCG*LNCFQR
Trigger: ACGTTGGAAGCAGTTGAGCAATCCACAGCAGGAAGT...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTACTTCCTGCTGTGGATaGCTCAACTGCTTCCAACGT +
Preference number: 3 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTTSCCG*LNCFQR
Trigger: ACGTTGGAAGCAGTTGAGCAATCCACAGCAGGAAGT...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCCCAATGATCTTGGCTTaGGTGACTTCTGTGTCCATT +
Preference number: 3 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRIPMILA*VTSVSI
Trigger: AATGGACACAGAAGTCACCAAAGCCAAGATCATTGG...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTCCAATGATCTTGGCTTaGGTGACTTCTGTGTCCATT +
Preference number: 3 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTPMILA*VTSVSI
Trigger: AATGGACACAGAAGTCACCAAAGCCAAGATCATTGG...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATGATCTTGGCTTTGGTGCAACTGCTTCCAACGTaGAAAGAAATCCTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: GSTSSRSAEPNPMILALVQLLPT*KEILRS
Trigger: GCTTCTCAGGATTTCTTTCAACGTTGGAAGCAGTTG...CACCAAAGCCAAGATCATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR GCA 72 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTaGTTTTGCCAGAAGTCATTACAAATACAAATGTTT +
Preference number: 3 (lower is better)
Translates to: WERRTVTSGQDT*FCQKSLQIQMF
Trigger: AAACATTTGTATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
3UTR-3UTR CAA 90 bp GAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATCAACTGCTTCCAACGTaGAAAGAAATCCTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: EIRRIRINFFKKCRTKSNQLLPT*KEILRS
Trigger: GCTTCTCAGGATTTCTTTCAACGTTGGAAGCAGTTG...ATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
3UTR-3UTR CAA 90 bp GAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATATTGGGTGCTTTGCTTaGAAGATGTTCTGCACTTCC +
Preference number: 3 (lower is better)
Translates to: EIRRIRINFFKKCRTKSNIGCFA*KMFCTS
Trigger: GGAAGTGCAGAACATCTTCAAAGCAAAGCACCCAAT...ATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCGAGGAGTGCCACACTaGGGGCCCCTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGRGVPH*GPLCSA
Trigger: GGCGCTGCAGAGGGGCCCTCAGTGTGGCACTCCTCG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGAAGGTCCACGGCCCGCTaGCGCACGCTCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGRSTAR*RTLTSR
Trigger: GCGGGACGTGAGCGTGCGGCAGCGGGCCGTGGACCT...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCCCCTCCAGGGACGACTaGACGGGGCCGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSPSRDD*TGPVEG
Trigger: TCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGG...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCGCCACACCACCCAGCTaGAGCACAAGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSATPPS*STSPAR
Trigger: CCGTGCTGGGCTTGTGCTGCAGCTGGGTGGTGTGGC...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCCGCACAGGGAAGCGGTaGCTCGGGGAGCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSRTGKR*LGEQPF
Trigger: GAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCG...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGAGGCGCTGGTACTGGCTaGGGCAGGCTCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGGAGTG*GRLRTP
Trigger: GGGGGTCCTGAGCCTGCCCCAGCCAGTACCAGCGCC...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCCTCAGGCCTGCACCGTaGCCTGGGGACGCCCACTCT +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGLRPAP*PGDAHS
Trigger: AGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAG...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCACTGGACGGGGCCGGTaGAAGGACTCAGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSTGRGR*KDSGLH
Trigger: GTGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGT...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCCCTCCAGGGACGACTaGACGGGGCCGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGPSRDD*TGPVEG
Trigger: TCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCGAGCAGCCTTTCCTCTaGTGGCGGGAGGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSEQPFL*WREGSR
Trigger: CCTTGACCCCTCCCGCCATCAGAGGAAAGGCTGCTC...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAGRRQV*SHQDGH
Trigger: GTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCC...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCGCCACACCACCCAGCTaGAGCACAAGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGATPPS*STSPAR
Trigger: CCGTGCTGGGCTTGTGCTGCAGCTGGGTGGTGTGGC...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGAAHAA*RRSTQA
Trigger: TGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCCTGCGCAGCACGTCCTaGATGGTGGGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSLRSTS*MVGFTS
Trigger: GGAGGTGAAGCCCACCATCCAGGACGTGCTGCGCAG...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCCCACGCCATGCACAGTaGCACTGCTGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSPRHAQ*HCCSQR
Trigger: CCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGG...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCACTGGACGGGGCCGGTaGAAGGACTCAGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGTGRGR*KDSGLH
Trigger: GTGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGT...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGCCACGTCTGCGTTCCTaGGCTGGCTGTCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRPRLRS*AGCRCA
Trigger: TGCGCAGCGACAGCCAGCTCAGGAACGCAGACGTGG...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCGACGTGGCTATGCTGTaGTCAAAGCCCGACACGCCG +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSDVAML*SKPDTP
Trigger: CGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTC...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCACTGGCCCAACTGGTTaGAGGCACGGACGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSTGPTG*RHGRAG
Trigger: ACCTGCTCGTCCGTGCCTGCAACCAGTTGGGCCAGT...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCAGGTCCACGGCCCGCTaGCGCACGCTCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPRSTAR*RTLTSR
Trigger: GCGGGACGTGAGCGTGCGGCAGCGGGCCGTGGACCT...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCGATCTGTGGGGCGTTaGTGCGGTCGCACATGGCGT +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGRSVGR*CGRTWR
Trigger: ACGCCATGTGCGACCGCAGCAACGCCCCACAGATCG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCAGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPGRRQV*SHQDGH
Trigger: GTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCC...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCCAAGGCCTCGGCGACTaGAGGAGCATAACAGACGCC +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSQGLGD*RSITDA
Trigger: GGCGTCTGTTATGCTCCTGCAGTCGCCGAGGCCTTG...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGAACACGGCGCTGGTACTaGCTGGGGCAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGTRRWY*LGQAQD
Trigger: GTCCTGAGCCTGCCCCAGCCAGTACCAGCGCCGTGT...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGCCGCAGGTGGCACATaGCATGCGGCCAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRAAGGT*HAANGP
Trigger: GGGGCCATTGGCCGCATGCCATGTGCCACCTGCGGC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCGAGCCGCAGACATTGTaGGGTGCACACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSEPQTL*GAHTAG
Trigger: CCCTGCAGTGTGTGCACCCCACAATGTCTGCGGCTC...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCCACCAGACCCAGAATaGCCTGTGCGAGAGGCGCAC +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGPPDPE*PVREAH
Trigger: GTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCTGTAGCCGCCCACTTTaGCCAGGTTCTCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGCSRPL*PGSRGT
Trigger: CGTGCCACGAGAACCTGGTCAAAGTGGGCGGCTACA...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGAGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGCAGGCGGCCTCGCACTaGAGGGTCTTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMQAASH*RVFWGW
Trigger: CCACCCCCAGAAGACCCTGCAGTGCGAGGCCGCCTG...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332231.9
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCGGTACATCTGGGCTTaGAGGTTCGGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGRYIWA*RFGSKR
Trigger: GCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCCATGCACAGTGGCACTaGTGCTCCCAGAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGHAQWH*CSQRLR
Trigger: TCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATG...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCATGCACAGTGGCACTaGTGCTCCCAGAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGHAQWH*CSQRLR
Trigger: TCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGAACCCAGAATGGCCTGTaGGAGAGGCGCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGTQNGL*ERRTPL
Trigger: CAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGT...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGGAGGGGTCAAGGGATaGAGGAGATCCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGGGVKG*RRSTAA
Trigger: TGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGATGTCCAGTCGCCCATaGGGACAAGATCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGMSSRP*GQDRGT
Trigger: CGTCCCCCGATCTTGTCCCCATGGGCGACTGGACAT...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCACTGCAGGGTCTTCTaGGGGTGGGTAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGHCRVF*GWVALQ
Trigger: CTGCAGTGCTACCCACCCCCAGAAGACCCTGCAGTG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332231.9
CDS-3UTR CCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCTCGGCCACGATCTGTaGGGCGTTGCTGCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVLGHDL*GVAAVA
Trigger: TGCGACCGCAGCAACGCCCCACAGATCGTGGCCGAG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGTCTGCGTTCCTGAGCTaGCTGTCGCTGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRSAFLS*LSLRST
Trigger: CGTGCTGCGCAGCGACAGCCAGCTCAGGAACGCAGA...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCCACTCCTGTCCCGCTTaGTGTCCTCCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSHSCPA*CPPGLS
Trigger: TGACAGACCTGGAGGACACCAAGCGGGACAGGAGTG...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCACCACGCCATGCACAGTaGCACTGCTGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAPRHAQ*HCCSQR
Trigger: CCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGG...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGAGGACGCTCCTCCCCTaGCTGCACATCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRRTLLP*LHIQGL
Trigger: GAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCT...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATTTACCCTGGAGTCCTaGGGGCCCTGCGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLFTLES*GPCGAG
Trigger: GCCGGCCCCGCAGGGCCCCCAGGACTCCAGGGTAAA...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGACTGGACGGGGCCGGTaGAAGGACTCAGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVTGRGR*KDSGLH
Trigger: GTGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGT...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCATGGCATGCGGCCAATaGCCCCTTCACTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSMACGQ*PLHFLT
Trigger: GGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCAT...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAGCAAGGCCCCAGCCTTaGCTCCTAGGCCGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLARPQP*LLGRPH
Trigger: GTGGGGCCGGCCTAGGAGCCAAGGCTGGGGCCTTGC...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCTGCGGATATCCGAGATaGAGACCGCCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRCGYPR*RPPGPA
Trigger: TGCGGGGCCTGGCGGTCTTCATCTCGGATATCCGCA...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332231.9
ENST00000448903.7
CDS-3UTR TCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGAGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCATGTAGCCGCCCACTTTaGCCAGGTTCTCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPACSRPL*PGSRGT
Trigger: CGTGCCACGAGAACCTGGTCAAAGTGGGCGGCTACA...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCACACAGAGGCCGAGTCTaGGAACACGTCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAHRGRV*EHVHEQ
Trigger: CTGCTCGTGGACGTGTTCTCAGACTCGGCCTCTGTG...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCAGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCACACGGGCCATCTCAGTaGCACTCCCACAAACGCCAC +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAHGPSQ*HSHKRH
Trigger: GTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTG...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGTGGGGACGCCCACTCTaGCAGGAAAGAGACGAGCAC +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRWGRPL*QERDEH
Trigger: GTGCTCGTCTCTTTCCTGTCAGAGTGGGCGTCCCCA...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGGAGCAGCCTTTCCTCTaGTGGCGGGAGGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVEQPFL*WREGSR
Trigger: CCTTGACCCCTCCCGCCATCAGAGGAAAGGCTGCTC...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAGGTCCACGGCCCGCTaGCGCACGCTCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPRSTAR*RTLTSR
Trigger: GCGGGACGTGAGCGTGCGGCAGCGGGCCGTGGACCT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GAGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATAGGTCCACGGCCCGCTaGCGCACGCTCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: EPVHLGLQVRLQAQQASNRSTAR*RTLTSR
Trigger: GCGGGACGTGAGCGTGCGGCAGCGGGCCGTGGACCT...ATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGAGGTCCACGGCCCGCTaGCGCACGCTCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGRSTAR*RTLTSR
Trigger: GCGGGACGTGAGCGTGCGGCAGCGGGCCGTGGACCT...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCCGATCTGTGGGGCGTTaGTGCGGTCGCACATGGCGT +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRRSVGR*CGRTWR
Trigger: ACGCCATGTGCGACCGCAGCAACGCCCCACAGATCG...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCGATCTGTGGGGCGTTaGTGCGGTCGCACATGGCGT +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVRSVGR*CGRTWR
Trigger: ACGCCATGTGCGACCGCAGCAACGCCCCACAGATCG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAGAGACCCAGCAGGTCTaGCGACGGAGAAGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAETQQV*RRRRRR
Trigger: TCTACGCCTTCTCCGTCGGCAGACCTGCTGGGTCTC...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCAACCAGGGTCAGCTGTaGTCCTCCCAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRNQGQL*SSQGPR
Trigger: CCTGGGCCCTTGGGAGGAGCACAGCTGACCCTGGTT...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGAGGTGGCACATGGCATaGGGCCAATGGCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRRWHMA*GQWPLH
Trigger: GTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCT...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACTCAGGTGTCAGACGTaGAGCCTGGGTGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGLRCQT*SLGAES
Trigger: GGACTCAGCACCCAGGCTGCACGTCTGACACCTGAG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGACCCAGAATGGCCTGTaGGAGAGGCGCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVTQNGL*ERRTPL
Trigger: CAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGT...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTTCTTTGACGAGGAGTaGCACACTGAGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSFFDEE*HTEGPS
Trigger: AGAGGGGCCCTCAGTGTGGCACTCCTCGTCAAAGAA...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGCAGGCGGCCTCGCACTaGAGGGTCTGGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKEQAASH*RVWGWV
Trigger: TACCCACCCCCAGACCCTGCAGTGCGAGGCCGCCTG...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGCTCGGCCACGATCTGTaGGGCGTTGCTGCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMLGHDL*GVAAVA
Trigger: TGCGACCGCAGCAACGCCCCACAGATCGTGGCCGAG...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACCTCGAACACAGTCTTaGCCGCGTAGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGPRTQS*PRSPAR
Trigger: ACGTGCAGGGCTACGCGGCCAAGACTGTGTTCGAGG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGGCACGTCCTGGATGGTaGGCTTCACCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRARPGW*ASPPGR
Trigger: TCTTCCCGGAGGTGAAGCCCACCATCCAGGACGTGC...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCTGCGCAGCACGTCCTaGATGGTGGGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVLRSTS*MVGFTS
Trigger: GGAGGTGAAGCCCACCATCCAGGACGTGCTGCGCAG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGTCTGCGTTCCTGAGCTaGCTGTCGCTGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVSAFLS*LSLRST
Trigger: CGTGCTGCGCAGCGACAGCCAGCTCAGGAACGCAGA...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCACTCCTGTCCCGCTTaGTGTCCTCCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGHSCPA*CPPGLS
Trigger: TGACAGACCTGGAGGACACCAAGCGGGACAGGAGTG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCCACTCCTGTCCCGCTTaGTGTCCTCCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGHSCPA*CPPGLS
Trigger: TGACAGACCTGGAGGACACCAAGCGGGACAGGAGTG...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAGTGAGCCGGTACATCTaGGCTTGCAGGTTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAVSRYI*ACRFGS
Trigger: GGAGCCGAACCTGCAAGCCCAGATGTACCGGCTCAC...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCATGGCATGCGGCCAATaGCCCCTTCACTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGMACGQ*PLHFLT
Trigger: GGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCAT...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGGCCGCAGGTGGCACATaGCATGCGGCCAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKEAAGGT*HAANGP
Trigger: GGGGCCATTGGCCGCATGCCATGTGCCACCTGCGGC...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCGCCGCAGGTGGCACATaGCATGCGGCCAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPAAGGT*HAANGP
Trigger: GGGGCCATTGGCCGCATGCCATGTGCCACCTGCGGC...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCACCCTCAAGCACATGTaGCCACCCACCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRTLKHM*PPTLPA
Trigger: GGCAGGGAGGGTGGGTGGCCACATGTGCTTGAGGGT...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCCACCAGACCCAGAATaGCCTGTGCGAGAGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVPPDPE*PVREAH
Trigger: GTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCGCACTGCCCAGCAGCTaGAACATGAGAATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGALPSS*NMRMRA
Trigger: GGCCCTCATTCTCATGTTCCAGCTGCTGGGCAGTGC...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCATCGCACTGCAGGGTCTaGGGGTGGGTAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPSHCRV*GWVALQ
Trigger: CTGCAGTGCTACCCACCCCCAGACCCTGCAGTGCGA...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCACACAGAGGCCGAGTCTaGGAACACGTCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPHRGRV*EHVHEQ
Trigger: CTGCTCGTGGACGTGTTCTCAGACTCGGCCTCTGTG...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCACGGGCCATCTCAGTaGCACTCCCACAAACGCCAC +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVHGPSQ*HSHKRH
Trigger: GTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGAGTCCAGATGACAGGTaGGACACAAGCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRSPDDR*DTSRRW
Trigger: CCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACT...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCGAGGAGTGCCACACTaGGGGCCCCTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGRGVPH*GPLCSA
Trigger: GGCGCTGCAGAGGGGCCCTCAGTGTGGCACTCCTCG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTCGAGGAGTGCCACACTaGGGGCCCCTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTRGVPH*GPLCSA
Trigger: GGCGCTGCAGAGGGGCCCTCAGTGTGGCACTCCTCG...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGCGATCTGTGGGGCGTTaGTGCGGTCGCACATGGCGT +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMRSVGR*CGRTWR
Trigger: ACGCCATGTGCGACCGCAGCAACGCCCCACAGATCG...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCTGCAGCTCCACGTCTaGGTTCCTGAGCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVLQLHV*VPELAV
Trigger: GACAGCCAGCTCAGGAACGCAGACGTGGAGCTGCAG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGCAGTCCAGCTGGGACTaGAGCAAAACCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRQSSWD*SKTRVS
Trigger: GCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTG...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACACACCTCTGAGTCTTaGGCCACCGGCCCACACTTT +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGHTSES*ATGPHF
Trigger: AAAGTGTGGGCCGGTGGCGCAAGACTCAGAGGTGTG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGACCCAGAATGGCCTGTaGGAGAGGCGCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMTQNGL*ERRTPL
Trigger: CAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGT...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAGCCACACCACCCAGCTaGAGCACAAGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLATPPS*STSPAR
Trigger: CCGTGCTGGGCTTGTGCTGCAGCTGGGTGGTGTGGC...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLAAHAA*RRSTQA
Trigger: TGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGC...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCGACTTGGGCGGTTCTTaGGCTTTGTTCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSDLGGS*ALFRMV
Trigger: GACCATCCTGAACAAAGCCCAAGAACCGCCCAAGTC...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCCGGCATTCTTCGCGTTaGAGTGCTGGACCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGRHSSR*SAGPSS
Trigger: CGAAGAAGGTCCAGCACTCCAACGCGAAGAATGCCG...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCACCTCGAACACAGTCTTaGCCGCGTAGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPPRTQS*PRSPAR
Trigger: ACGTGCAGGGCTACGCGGCCAAGACTGTGTTCGAGG...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAACTGGATCAGCGGGCTaGATCTCGGGTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPATGSAG*ISGLQL
Trigger: TAGCTGGAGACCCGAGATCCAGCCCGCTGATCCAGT...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCATGCAGCAGGTGGAACTaGATCAGCGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPACSRWN*ISGLDL
Trigger: GAGATCCAGCCCGCTGATCCAGTTCCACCTGCTGCA...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGTCTGCGTTCCTGAGCTaGCTGTCGCTGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMSAFLS*LSLRST
Trigger: CGTGCTGCGCAGCGACAGCCAGCTCAGGAACGCAGA...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGGCGCTGGTACTGGCTaGGGCAGGCTCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPGAGTG*GRLRTP
Trigger: GGGGGTCCTGAGCCTGCCCCAGCCAGTACCAGCGCC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCCTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGLNVED*RLREVG
Trigger: TCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAG...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGTGCACAGACACGTTCTaGAAGGTGCCCCCATACCTG +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGCTDTF*KVPPYL
Trigger: CAGGTATGGGGGCACCTTCCAGAACGTGTCTGTGCA...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGAGGACGCTCCTCCCCTaGCTGCACATCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMRTLLP*LHIQGL
Trigger: GAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCT...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATTTTACCCTGGAGTCCTaGGGGCCCTGCGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHFTLES*GPCGAG
Trigger: GCCGGCCCCGCAGGGCCCCCAGGACTCCAGGGTAAA...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGTTTACCCTGGAGTCCTaGGGGCCCTGCGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEFTLES*GPCGAG
Trigger: GCCGGCCCCGCAGGGCCCCCAGGACTCCAGGGTAAA...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAGTCAGACGTGCAGCCTaGGTGCTGAGTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAVRRAA*VLSPDD
Trigger: GTCATCTGGACTCAGCACCCAGGCTGCACGTCTGAC...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCTGGCACGCGGGAGCCTaGAGAGCCTCGAACACAGTC +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCWHAGA*RASNTV
Trigger: GACTGTGTTCGAGGCTCTTCAGGCTCCCGCGTGCCA...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCACCCCCATACCTGAACTaGATGTTGAGGACTGGCGCC +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPPPYLN*MLRTGA
Trigger: GGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGG...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCCCCCATACCTGAACTaGATGTTGAGGACTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVPPYLN*MLRTGA
Trigger: GGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAGAGCAGCCTTTCCTCTaGTGGCGGGAGGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLEQPFL*WREGSR
Trigger: CCTTGACCCCTCCCGCCATCAGAGGAAAGGCTGCTC...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGTTACCACACCCAAGTaGTGGTCATTGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGVTTPK*WSLSRC
Trigger: GCACCTGCTCAATGACCAGCACTTGGGTGTGGTAAC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGAGACCCAGCAGGTCTaGCGACGGAGAAGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMETQQV*RRRRRR
Trigger: TCTACGCCTTCTCCGTCGGCAGACCTGCTGGGTCTC...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTGGAAGGACTCAGGCCTaGACCGTGGCCTGGGGACGC +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTGRTQA*TVAWGR
Trigger: GCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTCC...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGGAAGGACTCAGGCCTaGACCGTGGCCTGGGGACGC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPGRTQA*TVAWGR
Trigger: GCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTCC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGCAGGCGGCCTCGCACTaGAGGGTCTGGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEQAASH*RVWGWV
Trigger: TACCCACCCCCAGACCCTGCAGTGCGAGGCCGCCTG...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACAGGCGGCCTCGCACTaGAGGGTCTGGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPQAASH*RVWGWV
Trigger: TACCCACCCCCAGACCCTGCAGTGCGAGGCCGCCTG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000448903.7
ENST00000534328.5
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCGGACCTTCTTCGACTTaGGCGGTTCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGGPSST*AVLGLC
Trigger: ACAAAGCCCAAGAACCGCCCAAGTCGAAGAAGGTCC...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGATTCGCGTTGGAGTGCTaGACCTTCTTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGFALEC*TFFDLG
Trigger: GCCCAAGTCGAAGAAGGTCCAGCACTCCAACGCGAA...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCATTGGAGTGCAGCAGGTaGAACTGGATCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPLECSR*NWISGL
Trigger: CAGCCCGCTGATCCAGTTCCACCTGCTGCACTCCAA...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGCTGCGCAGCACGTCCTaGATGGTGGGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKELRSTS*MVGFTS
Trigger: GGAGGTGAAGCCCACCATCCAGGACGTGCTGCGCAG...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGGCGCTGGTACTGGCTaGGGCAGGCTCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRGAGTG*GRLRTP
Trigger: GGGGGTCCTGAGCCTGCCCCAGCCAGTACCAGCGCC...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGTGCACAGACACGTTCTaGAAGGTGCCCCCATACCTG +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRCTDTF*KVPPYL
Trigger: CAGGTATGGGGGCACCTTCCAGAACGTGTCTGTGCA...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGTGGGTGGTTTTCGTGTaGATGATTCCAGCTCCCACG +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGWVVFV*MIPAPT
Trigger: CGTGGGAGCTGGAATCATCCACACGAAAACCACCCA...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCAGGACGCTCCTCCCCTaGCTGCACATCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPRTLLP*LHIQGL
Trigger: GAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCT...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCTCAGGCCTGCACCGTaGCCTGGGGACGCCCACTCT +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGLRPAP*PGDAHS
Trigger: AGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTCTCAGGCCTGCACCGTaGCCTGGGGACGCCCACTCT +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTLRPAP*PGDAHS
Trigger: AGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAG...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGGCCGCAGGTGGCACATaGCATGCGGCCAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEAAGGT*HAANGP
Trigger: GGGGCCATTGGCCGCATGCCATGTGCCACCTGCGGC...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCAAGGCCCCAGCCTTaGCTCCTAGGCCGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRARPQP*LLGRPH
Trigger: GTGGGGCCGGCCTAGGAGCCAAGGCTGGGGCCTTGC...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCACCCTCAAGCACATGTaGCCACCCACCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPTLKHM*PPTLPA
Trigger: GGCAGGGAGGGTGGGTGGCCACATGTGCTTGAGGGT...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTACCACCAGACCCAGAATaGCCTGTGCGAGAGGCGCAC +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLPPDPE*PVREAH
Trigger: GTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGG...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGTGTCACGGCACCTaGCACCACCAGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMACHGT*HHQTQN
Trigger: ATTCTGGGTCTGGTGGTGCCAGGTGCCGTGACACGC...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGCCACGGCGCTGGTACTaGCTGGGGCAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLPRRWY*LGQAQD
Trigger: GTCCTGAGCCTGCCCCAGCCAGTACCAGCGCCGTGG...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCCACGGCGCTGGTACTaGCTGGGGCAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGPRRWY*LGQAQD
Trigger: GTCCTGAGCCTGCCCCAGCCAGTACCAGCGCCGTGG...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGGCTCACTGTCATGGTaGATGATTAAGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGGSLSW*MIKLMA
Trigger: GGCCATCAGCTTAATCATTCACCATGACAGTGAGCC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGTGTAGCCGCCCACTTTaGCCAGGTTCTCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKECSRPL*PGSRGT
Trigger: CGTGCCACGAGAACCTGGTCAAAGTGGGCGGCTACA...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACCACGTCTGCGTTCCTaGGCTGGCTGTCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPPRLRS*AGCRCA
Trigger: TGCGCAGCGACAGCCAGCTCAGGAACGCAGACGTGG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCCACGTCTGCGTTCCTaGGCTGGCTGTCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGPRLRS*AGCRCA
Trigger: TGCGCAGCGACAGCCAGCTCAGGAACGCAGACGTGG...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATCCACGTCTGCGTTCCTaGGCTGGCTGTCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHPRLRS*AGCRCA
Trigger: TGCGCAGCGACAGCCAGCTCAGGAACGCAGACGTGG...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGAGACGAGCACACCTCTaGGTCTTGCGCCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGRRAHL*VLRHRP
Trigger: GGGCCGGTGGCGCAAGACTCAGAGGTGTGCTCGTCT...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGAGACGAGCACACCTCTaGGTCTTGCGCCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMRRAHL*VLRHRP
Trigger: GGGCCGGTGGCGCAAGACTCAGAGGTGTGCTCGTCT...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCTGGGGACGCCCACTCTaGCAGGAAAGAGACGAGCAC +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCWGRPL*QERDEH
Trigger: GTGCTCGTCTCTTTCCTGTCAGAGTGGGCGTCCCCA...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAGTGCAGCCTGGGTGCTaGGTCCAGATGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLVQPGC*VQMTGE
Trigger: CTCACCTGTCATCTGGACTCAGCACCCAGGCTGCAC...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCGTGCAGCCTGGGTGCTaGGTCCAGATGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCVQPGC*VQMTGE
Trigger: CTCACCTGTCATCTGGACTCAGCACCCAGGCTGCAC...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCGTGCAGCCTGGGTGCTaGGTCCAGATGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPVQPGC*VQMTGE
Trigger: CTCACCTGTCATCTGGACTCAGCACCCAGGCTGCAC...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCCTGGAGATCTGTGGATaGAGACGTCACGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGLEICG*RRHDSA
Trigger: AGCAGAATCGTGACGTCTGCATCCACAGATCTCCAG...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGCTGGAGATCTGTGGATaGAGACGTCACGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGLEICG*RRHDSA
Trigger: AGCAGAATCGTGACGTCTGCATCCACAGATCTCCAG...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAACTGGCCCAACTGGTTaGAGGCACGGACGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLTGPTG*RHGRAG
Trigger: ACCTGCTCGTCCGTGCCTGCAACCAGTTGGGCCAGT...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCACTGGCCCAACTGGTTaGAGGCACGGACGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCTGPTG*RHGRAG
Trigger: ACCTGCTCGTCCGTGCCTGCAACCAGTTGGGCCAGT...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGAGGTCCACGGCCCGCTaGCGCACGCTCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRRSTAR*RTLTSR
Trigger: GCGGGACGTGAGCGTGCGGCAGCGGGCCGTGGACCT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCCTGCAGCTCCACGTCTaGGTTCCTGAGCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCLQLHV*VPELAV
Trigger: GACAGCCAGCTCAGGAACGCAGACGTGGAGCTGCAG...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCATGTTCTGCACTTCCTaGTGTGGATTGCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSMFCTS*CGLLNC
Trigger: GCAGTTGAGCAATCCACAGCAGGAAGTGCAGAACAT...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCCGGTACATCTGGGCTTaGAGGTTCGGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPRYIWA*RFGSKR
Trigger: GCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCCGGTACATCTGGGCTTaGAGGTTCGGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCRYIWA*RFGSKR
Trigger: GCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGTCCGGCCAGGACACGTaGTTTTGCCAGAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGSGQDT*FCQKSL
Trigger: TAATGACTTCTGGCAAAAGCACGTGTCCTGGCCGGA...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGCTCAGGTGTCAGACGTaGAGCCTGGGTGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKELRCQT*SLGAES
Trigger: GGACTCAGCACCCAGGCTGCACGTCTGACACCTGAG...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCCTCAGGTGTCAGACGTaGAGCCTGGGTGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCLRCQT*SLGAES
Trigger: GGACTCAGCACCCAGGCTGCACGTCTGACACCTGAG...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCACCACTGACGTGGCTATaGTGTGATCAAAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAPLTWL*CDQSPT
Trigger: TGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGG...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACCACTGACGTGGCTATaGTGTGATCAAAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGPLTWL*CDQSPT
Trigger: TGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTGCCACACCACCCAGCTaGAGCACAAGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTATPPS*STSPAR
Trigger: CCGTGCTGGGCTTGTGCTGCAGCTGGGTGGTGTGGC...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPAAHAA*RRSTQA
Trigger: TGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTGCAGCACACGCAGCCTaGAGGCGCAGCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTAAHAA*RRSTQA
Trigger: TGCCTGTGTGCTGCGCCTGCAGGCTGCGTGTGCTGC...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCGGAGGGGTCAAGGGATaGAGGAGATCCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCGGVKG*RRSTAA
Trigger: TGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTCGCACAGGGAAGCGGTaGCTCGGGGAGCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTRTGKR*LGEQPF
Trigger: GAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCG...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGAGGGTCTTCTGGGGGTaGGTAGCACTGCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMRVFWG*VALQQS
Trigger: AGACTGCTGCAGTGCTACCCACCCCCAGAAGACCCT...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332231.9
CDS-3UTR CCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGGGGCTTTGTTCAGGATaGTCTCCAGGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRGLCSG*SPGTQS
Trigger: TGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCC...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAGGACCTTCTTCGACTTaGGCGGTTCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAGPSST*AVLGLC
Trigger: ACAAAGCCCAAGAACCGCCCAAGTCGAAGAAGGTCC...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGAGAAACTGGCCCAACTaGTTGCAGGCACGGACGAGC +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMRNWPN*LQARTS
Trigger: GCTCGTCCGTGCCTGCAACCAGTTGGGCCAGTTTCT...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCTCGGCCACGATCTGTaGGGCGTTGCTGCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGLGHDL*GVAAVA
Trigger: TGCGACCGCAGCAACGCCCCACAGATCGTGGCCGAG...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGACTGGATCAGCGGGCTaGATCTCGGGTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMTGSAG*ISGLQL
Trigger: TAGCTGGAGACCCGAGATCCAGCCCGCTGATCCAGT...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGTGCAGCAGGTGGAACTaGATCAGCGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMCSRWN*ISGLDL
Trigger: GAGATCCAGCCCGCTGATCCAGTTCCACCTGCTGCA...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGCACTCCTGTCCCGCTTaGTGTCCTCCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMHSCPA*CPPGLS
Trigger: TGACAGACCTGGAGGACACCAAGCGGGACAGGAGTG...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTACACGGCGCTGGTACTaGCTGGGGCAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTTRRWY*LGQAQD
Trigger: GTCCTGAGCCTGCCCCAGCCAGTACCAGCGCCGTGT...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGCAAGACACACGAGCCTaGTCTTCCATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRQDTRA*SSILRT
Trigger: AGTCCTGAGGATGGAAGACCAGGCTCGTGTGTCTTG...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACAAGACACACGAGCCTaGTCTTCCATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGQDTRA*SSILRT
Trigger: AGTCCTGAGGATGGAAGACCAGGCTCGTGTGTCTTG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKEIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCGACACAAGCCGCAGGTaGCACATGGCATGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCDTSRR*HMACGQ
Trigger: TTGGCCGCATGCCATGTGCCACCTGCGGCTTGTGTC...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCAGCCAGAACCTGTGCTaGGTGTGTTTAGGACAAACA +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSSQNLC*VCLGQT
Trigger: TGTTTGTCCTAAACACACCCAGCACAGGTTCTGGCT...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCGAGCCGCAGACATTGTaGGGTGCACACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPEPQTL*GAHTAG
Trigger: CCCTGCAGTGTGTGCACCCCACAATGTCTGCGGCTC...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAGCGTGTCACGGCACCTaGCACCACCAGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLACHGT*HHQTQN
Trigger: ATTCTGGGTCTGGTGGTGCCAGGTGCCGTGACACGC...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGTGCGGATATCCGAGATaGAGACCGCCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGCGYPR*RPPGPA
Trigger: TGCGGGGCCTGGCGGTCTTCATCTCGGATATCCGCA...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGTGGCACGCGGGAGCCTaGAGAGCCTCGAACACAGTC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGWHAGA*RASNTV
Trigger: GACTGTGTTCGAGGCTCTTCAGGCTCCCGCGTGCCA...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGTGGCACGCGGGAGCCTaGAGAGCCTCGAACACAGTC +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMWHAGA*RASNTV
Trigger: GACTGTGTTCGAGGCTCTTCAGGCTCCCGCGTGCCA...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGTGGCACGCGGGAGCCTaGAGAGCCTCGAACACAGTC +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLWHAGA*RASNTV
Trigger: GACTGTGTTCGAGGCTCTTCAGGCTCCCGCGTGCCA...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACCCACGTCTGCGTTCCTaGGCTGGCTGTCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHPRLRS*AGCRCA
Trigger: TGCGCAGCGACAGCCAGCTCAGGAACGCAGACGTGG...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCAGGTTCAGGTTAGGCTaGAGGTCGTCTGAACAGATT +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGRFRLG*RSSEQI
Trigger: AATCTGTTCAGACGACCTTCAGCCTAACCTGAACCT...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTCGAGGAGTGCCACACTaGGGGCCCCTCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSARGVPH*GPLCSA
Trigger: GGCGCTGCAGAGGGGCCCTCAGTGTGGCACTCCTCG...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGACTGGAGATCTGTGGATaGAGACGTCACGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGLEICG*RRHDSA
Trigger: AGCAGAATCGTGACGTCTGCATCCACAGATCTCCAG...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGATTCTTCGCGTTGGAGTaGTGGACCTTCTTCGACTTG +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGFFALE*WTFFDL
Trigger: CAAGTCGAAGAAGGTCCAGCACTCCAACGCGAAGAA...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCTTGGTCTCGCGGTGCTaGAGAAACTGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCLVSRC*RNWPNW
Trigger: CCAGTTGGGCCAGTTTCTGCAGCACCGCGAGACCAA...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGCGATCTGTGGGGCGTTaGTGCGGTCGCACATGGCGT +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLRSVGR*CGRTWR
Trigger: ACGCCATGTGCGACCGCAGCAACGCCCCACAGATCG...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCGATCTGTGGGGCGTTaGTGCGGTCGCACATGGCGT +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGRSVGR*CGRTWR
Trigger: ACGCCATGTGCGACCGCAGCAACGCCCCACAGATCG...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCCCAGGTCTGTCACCGTaGTGGGGCCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPPGLSP*WGPSSS
Trigger: AGAAGAAGAAGGGCCCCAGCACGGTGACAGACCTGG...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATAACCAGGGTCAGCTGTaGTCCTCCCAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHNQGQL*SSQGPR
Trigger: CCTGGGCCCTTGGGAGGAGCACAGCTGACCCTGGTT...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGAACCAGGGTCAGCTGTaGTCCTCCCAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTENQGQL*SSQGPR
Trigger: CCTGGGCCCTTGGGAGGAGCACAGCTGACCCTGGTT...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCCACACCTCTGAGTCTTaGGCCACCGGCCCACACTTT +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPHTSES*ATGPHF
Trigger: AAAGTGTGGGCCGGTGGCGCAAGACTCAGAGGTGTG...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGTGGGGTGCACACACTaGAGGGGAGCTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHVGCTH*RGAVET
Trigger: GGTCTCCACAGCTCCCCTGCAGTGTGTGCACCCCAC...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCCACTGACGTGGCTATaGTGTGATCAAAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVPLTWL*CDQSPT
Trigger: TGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGACCCAGAATGGCCTGTaGGAGAGGCGCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMTQNGL*ERRTPL
Trigger: CAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGT...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCGGGCTTTGTTCAGGATaGTCTCCAGGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRGLCSG*SPGTQS
Trigger: TGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCC...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGGGACCTTCTTCGACTTaGGCGGTTCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVGPSST*AVLGLC
Trigger: ACAAAGCCCAAGAACCGCCCAAGTCGAAGAAGGTCC...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACCTCGGCCACGATCTGTaGGGCGTTGCTGCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHLGHDL*GVAAVA
Trigger: TGCGACCGCAGCAACGCCCCACAGATCGTGGCCGAG...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATTGGAGTGCAGCAGGTaGAACTGGATCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLLECSR*NWISGL
Trigger: CAGCCCGCTGATCCAGTTCCACCTGCTGCACTCCAA...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGCTGCGCAGCACGTCCTaGATGGTGGGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLLRSTS*MVGFTS
Trigger: GGAGGTGAAGCCCACCATCCAGGACGTGCTGCGCAG...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GAGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGCGCAGCACGTCCTaGATGGTGGGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: EPVHLGLQVRLQAQQASNLRSTS*MVGFTS
Trigger: GGAGGTGAAGCCCACCATCCAGGACGTGCTGCGCAG...ATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGCTGCGCAGCACGTCCTaGATGGTGGGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWLRSTS*MVGFTS
Trigger: GGAGGTGAAGCCCACCATCCAGGACGTGCTGCGCAG...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCTGGGTGGTTTTCGTGTaGATGATTCCAGCTCCCACG +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRWVVFV*MIPAPT
Trigger: CGTGGGAGCTGGAATCATCCACACGAAAACCACCCA...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGACTGGACGGGGCCGGTaGAAGGACTCAGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRTGRGR*KDSGLH
Trigger: GTGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGT...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTACCCTCAAGCACATGTaGCCACCCACCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTTLKHM*PPTLPA
Trigger: GGCAGGGAGGGTGGGTGGCCACATGTGCTTGAGGGT...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGTCGCACTGCAGGGTCTaGGGGTGGGTAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGSHCRV*GWVALQ
Trigger: CTGCAGTGCTACCCACCCCCAGACCCTGCAGTGCGA...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000448903.7
ENST00000534328.5
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCATCGCACTGCAGGGTCTaGGGGTGGGTAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPSHCRV*GWVALQ
Trigger: CTGCAGTGCTACCCACCCCCAGACCCTGCAGTGCGA...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000448903.7
ENST00000534328.5
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGATCAGCTCACTGTTTaGGTTCACCAACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGDQLTV*VHQHRD
Trigger: ATCTCTGTGTTGGTGAACTCAAACAGTGAGCTGATC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCATCTGTGCTAAAGTGGTaGTCAGACTTGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPSVLKW*SDLWLQ
Trigger: CTGCAGCCACAAGTCTGATCACCACTTTAGCACAGA...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGGGCTCACTGTCATGGTaGATGATTAAGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVGSLSW*MIKLMA
Trigger: GGCCATCAGCTTAATCATTCACCATGACAGTGAGCC...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGTGTAGCCGCCCACTTTaGCCAGGTTCTCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWCSRPL*PGSRGT
Trigger: CGTGCCACGAGAACCTGGTCAAAGTGGGCGGCTACA...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGAGGTTCAGGTTAGGCTaGAGGTCGTCTGAACAGATT +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRRFRLG*RSSEQI
Trigger: AATCTGTTCAGACGACCTTCAGCCTAACCTGAACCT...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCTTGCGCCACCGGCCCACACTTTACCCTGGAGTCCTGGGGGCCCTGCGGGGCTTGGGTGCTTTGCTTTaGAGATGTTCTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: VLRHRPTLYPGVLGALRGLGALL*RCSALP
Trigger: AGGAAGTGCAGAACATCTTCAAAGCAAAGCACCCAA...GCCCCGCAGGGCCCCCAGGACTCCAGGGTAAAGTGTGGGCCGGTGGCGCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGCGGGAGGTGGTTTTCGTGTGGATaGTTCCAGCTCCCACGAAAT +
Preference number: 4 (lower is better)
Translates to: AAQGSGASGSSLSSDGGRWFSCG*FQLPRN
Trigger: ATTTCGTGGGAGCTGGAATCATCCACACGAAAACCA...CCTCCCGCCATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTACTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLLSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGCACGGGCCATCTCAGTaGCACTCCCACAAACGCCAC +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEHGPSQ*HSHKRH
Trigger: GTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTG...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCATGGGGACGCCCACTCTaGCAGGAAAGAGACGAGCAC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPWGRPL*QERDEH
Trigger: GTGCTCGTCTCTTTCCTGTCAGAGTGGGCGTCCCCA...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGACGTGGCTATGCTGTaGTCAAAGCCCGACACGCCG +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMDVAML*SKPDTP
Trigger: CGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTC...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCTGGAGATCTGTGGATaGAGACGTCACGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVLEICG*RRHDSA
Trigger: AGCAGAATCGTGACGTCTGCATCCACAGATCTCCAG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCAGGCGGCCTCGCACTaGAGGGTCTTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRQAASH*RVFWGW
Trigger: CCACCCCCAGAAGACCCTGCAGTGCGAGGCCGCCTG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGACTGGCCCAACTGGTTaGAGGCACGGACGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGTGPTG*RHGRAG
Trigger: ACCTGCTCGTCCGTGCCTGCAACCAGTTGGGCCAGT...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAACTGGCCCAACTGGTTaGAGGCACGGACGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPTGPTG*RHGRAG
Trigger: ACCTGCTCGTCCGTGCCTGCAACCAGTTGGGCCAGT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCTGCAGCTCCACGTCTaGGTTCCTGAGCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGLQLHV*VPELAV
Trigger: GACAGCCAGCTCAGGAACGCAGACGTGGAGCTGCAG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCTGCAGCTCCACGTCTaGGTTCCTGAGCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGLQLHV*VPELAV
Trigger: GACAGCCAGCTCAGGAACGCAGACGTGGAGCTGCAG...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATCGGTACATCTGGGCTTaGAGGTTCGGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHRYIWA*RFGSKR
Trigger: GCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGCATGCACAGTGGCACTaGTGCTCCCAGAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEHAQWH*CSQRLR
Trigger: TCGGAGCCTCTGGGAGCAGCAGTGCCACTGTGCATG...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTCAAGGCCTCGGCGACTaGAGGAGCATAACAGACGCC +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTQGLGD*RSITDA
Trigger: GGCGTCTGTTATGCTCCTGCAGTCGCCGAGGCCTTG...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATAGGTGGCACATGGCATaGGGCCAATGGCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHRWHMA*GQWPLH
Trigger: GTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCT...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAGGTGGCACATGGCATaGGGCCAATGGCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPRWHMA*GQWPLH
Trigger: GTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACTCAGGTGTCAGACGTaGAGCCTGGGTGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPLRCQT*SLGAES
Trigger: GGACTCAGCACCCAGGCTGCACGTCTGACACCTGAG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGGAGGGGTCAAGGGATaGAGGAGATCCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGGGVKG*RRSTAA
Trigger: TGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCGCACAGGGAAGCGGTaGCTCGGGGAGCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPRTGKR*LGEQPF
Trigger: GAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCG...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGTTCTTTGACGAGGAGTaGCACACTGAGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKEFFDEE*HTEGPS
Trigger: AGAGGGGCCCTCAGTGTGGCACTCCTCGTCAAAGAA...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGATGTCCAGTCGCCCATaGGGACAAGATCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLMSSRP*GQDRGT
Trigger: CGTCCCCCGATCTTGTCCCCATGGGCGACTGGACAT...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGATGTCCAGTCGCCCATaGGGACAAGATCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGMSSRP*GQDRGT
Trigger: CGTCCCCCGATCTTGTCCCCATGGGCGACTGGACAT...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCAACTTCTCAGCCAGGATaGCGACCTTCAGCACAATCT +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPTSQPG*RPSAQS
Trigger: AGATTGTGCTGAAGGTCGCCATCCTGGCTGAGAAGT...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTCCTCGAACACAGTCTTaGCCGCGTAGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTPRTQS*PRSPAR
Trigger: ACGTGCAGGGCTACGCGGCCAAGACTGTGTTCGAGG...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGCACGTCCTGGATGGTaGGCTTCACCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGARPGW*ASPPGR
Trigger: TCTTCCCGGAGGTGAAGCCCACCATCCAGGACGTGC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGGCACGTCCTGGATGGTaGGCTTCACCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGARPGW*ASPPGR
Trigger: TCTTCCCGGAGGTGAAGCCCACCATCCAGGACGTGC...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGCTGCGCAGCACGTCCTaGATGGTGGGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRLRSTS*MVGFTS
Trigger: GGAGGTGAAGCCCACCATCCAGGACGTGCTGCGCAG...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGGGCGCTGGTACTGGCTaGGGCAGGCTCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKGAGTG*GRLRTP
Trigger: GGGGGTCCTGAGCCTGCCCCAGCCAGTACCAGCGCC...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGCTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKELNVED*RLREVG
Trigger: TCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAG...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGCCATTTCTGTCGGCTaGAAGAATTTGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGAISVG*KNLLRV
Trigger: CACTCTCAACAAATTCTTCCAGCCGACAGAAATGGC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGTGAGCCGGTACATCTaGGCTTGCAGGTTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGVSRYI*ACRFGS
Trigger: GGAGCCGAACCTGCAAGCCCAGATGTACCGGCTCAC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGTGAGCCGGTACATCTaGGCTTGCAGGTTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLVSRYI*ACRFGS
Trigger: GGAGCCGAACCTGCAAGCCCAGATGTACCGGCTCAC...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGTGAGCCGGTACATCTaGGCTTGCAGGTTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPVSRYI*ACRFGS
Trigger: GGAGCCGAACCTGCAAGCCCAGATGTACCGGCTCAC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCATCCACCTTCTGCCGTaGCTGCCACAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIIHLLP*LPQSRL
Trigger: CAGCCTGGACTGTGGCAGCCACGGCAGAAGGTGGAT...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTTTTACCCTGGAGTCCTaGGGGCCCTGCGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSFTLES*GPCGAG
Trigger: GCCGGCCCCGCAGGGCCCCCAGGACTCCAGGGTAAA...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTGACACAAGCCGCAGGTaGCACATGGCATGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTDTSRR*HMACGQ
Trigger: TTGGCCGCATGCCATGTGCCACCTGCGGCTTGTGTC...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGACACAAGCCGCAGGTaGCACATGGCATGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPDTSRR*HMACGQ
Trigger: TTGGCCGCATGCCATGTGCCACCTGCGGCTTGTGTC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGGCAAGGCCCCAGCCTTaGCTCCTAGGCCGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKARPQP*LLGRPH
Trigger: GTGGGGCCGGCCTAGGAGCCAAGGCTGGGGCCTTGC...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTGAGCCGCAGACATTGTaGGGTGCACACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTEPQTL*GAHTAG
Trigger: CCCTGCAGTGTGTGCACCCCACAATGTCTGCGGCTC...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTGCGTGTCACGGCACCTaGCACCACCAGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTACHGT*HHQTQN
Trigger: ATTCTGGGTCTGGTGGTGCCAGGTGCCGTGACACGC...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGAACAAACCACGGCGCTaGTACTGGCTGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLNKPRR*YWLGQA
Trigger: AGCCTGCCCCAGCCAGTACCAGCGCCGTGGTTTGTT...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGAGATCAGCTCACTGTTTaGGTTCACCAACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGDQLTV*VHQHRD
Trigger: ATCTCTGTGTTGGTGAACTCAAACAGTGAGCTGATC...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGTGTAGCCGCCCACTTTaGCCAGGTTCTCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRCSRPL*PGSRGT
Trigger: CGTGCCACGAGAACCTGGTCAAAGTGGGCGGCTACA...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCCACGTCTGCGTTCCTaGGCTGGCTGTCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRPRLRS*AGCRCA
Trigger: TGCGCAGCGACAGCCAGCTCAGGAACGCAGACGTGG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGGGCCCTTCTTCTTCTTaGGCTTTGCCAAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKEGPSSS*ALPRWR
Trigger: CCTCCATCTTGGCAAAGCTCAAGAAGAAGAAGGGCC...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCGGCCCTTCTTCTTCTTaGGCTTTGCCAAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCGPSSS*ALPRWR
Trigger: CCTCCATCTTGGCAAAGCTCAAGAAGAAGAAGGGCC...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATCCCCCATACCTGAACTaGATGTTGAGGACTGGCGCC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHPPYLN*MLRTGA
Trigger: GGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGG...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCCCCCATACCTGAACTaGATGTTGAGGACTGGCGCC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGPPYLN*MLRTGA
Trigger: GGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGAGTCCAGATGACAGGTaGGACACAAGCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGSPDDR*DTSRRW
Trigger: CCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACT...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGTGCTGAGTCCAGATaGCAGGTGAGACACAAGCCG +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHGAESR*QVRHKP
Trigger: CGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACC...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGGTGCTGAGTCCAGATaGCAGGTGAGACACAAGCCG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPGAESR*QVRHKP
Trigger: CGGCTTGTGTCTCACCTGTCATCTGGACTCAGCACC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGACGTGGCTATGCTGTaGTCAAAGCCCGACACGCCG +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRDVAML*SKPDTP
Trigger: CGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTC...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGGATCAGACTTGTGGCTaGAGTTACCACACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMDQTCG*SYHTQV
Trigger: CACTTGGGTGTGGTAACTGCAGCCACAAGTCTGATC...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTTTGGTCTCGCGGTGCTaGAGAAACTGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTLVSRC*RNWPNW
Trigger: CCAGTTGGGCCAGTTTCTGCAGCACCGCGAGACCAA...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTTGGTCTCGCGGTGCTaGAGAAACTGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPILVSRC*RNWPNW
Trigger: CCAGTTGGGCCAGTTTCTGCAGCACCGCGAGACCAA...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAGGTCCACGGCCCGCTaGCGCACGCTCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRIRSTAR*RTLTSR
Trigger: GCGGGACGTGAGCGTGCGGCAGCGGGCCGTGGACCT...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCCCAGGTCTGTCACCGTaGTGGGGCCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIPGLSP*WGPSSS
Trigger: AGAAGAAGAAGGGCCCCAGCACGGTGACAGACCTGG...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCCAGGTCTGTCACCGTaGTGGGGCCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGPGLSP*WGPSSS
Trigger: AGAAGAAGAAGGGCCCCAGCACGGTGACAGACCTGG...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCATGTTCTGCACTTCCTaGTGTGGATTGCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRMFCTS*CGLLNC
Trigger: GCAGTTGAGCAATCCACAGCAGGAAGTGCAGAACAT...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAGCTTTGAAGATGTTCTaGACTTCCTGCTGTGGATTG +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAALKMF*TSCCGL
Trigger: CAATCCACAGCAGGAAGTGCAGAACATCTTCAAAGC...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATCCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGCCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSGRRQV*SHQDGH
Trigger: GTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCC...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGGGACGACGCCAGGTGTaGAGCCACCAGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKGRRQV*SHQDGH
Trigger: GTGGCCGTCCTGGTGGCTGCACACCTGGCGTCGTCC...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATCAGTCCAGCTGGGACTaGAGCAAAACCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHQSSWD*SKTRVS
Trigger: GCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTG...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCAGTCCAGCTGGGACTaGAGCAAAACCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGQSSWD*SKTRVS
Trigger: GCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCCAGGACACGTGCTTTTaGCAGAAGTCATTACAAATA +
Preference number: 4 (lower is better)
Translates to: GPLCSAAQGSGASGSSLSQDTCF*QKSLQI
Trigger: TATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTG...GGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGTCCGGCCAGGACACGTaGTTTTGCCAGAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMSGQDT*FCQKSL
Trigger: TAATGACTTCTGGCAAAAGCACGTGTCCTGGCCGGA...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTCACACCTCTGAGTCTTaGGCCACCGGCCCACACTTT +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTHTSES*ATGPHF
Trigger: AAAGTGTGGGCCGGTGGCGCAAGACTCAGAGGTGTG...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGGGAAGGACTCAGGCCTaGACCGTGGCCTGGGGACGC +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKGRTQA*TVAWGR
Trigger: GCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTCC...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GAAGGACTCAGGCCTGCACCGTGGCCTGGGGACGCCCACTCTGACAGGAAAGAGCCACTGACGTGGCTATaGTGTGATCAAAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: EGLRPAPWPGDAHSDRKEPLTWL*CDQSPT
Trigger: TGTCGGGCTTTGATCACAGCATAGCCACGTCAGTGG...CTCTTTCCTGTCAGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTCGCACAGGGAAGCGGTaGCTCGGGGAGCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSARTGKR*LGEQPF
Trigger: GAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCG...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGCAGGCGGCCTCGCACTaGAGGGTCTGGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKQAASH*RVWGWV
Trigger: TACCCACCCCCAGACCCTGCAGTGCGAGGCCGCCTG...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCGGGCTTTGTTCAGGATaGTCTCCAGGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPGLCSG*SPGTQS
Trigger: TGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCC...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCGACTTGGGCGGTTCTTaGGCTTTGTTCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPDLGGS*ALFRMV
Trigger: GACCATCCTGAACAAAGCCCAAGAACCGCCCAAGTC...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGAGAAACTGGCCCAACTaGTTGCAGGCACGGACGAGC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGRNWPN*LQARTS
Trigger: GCTCGTCCGTGCCTGCAACCAGTTGGGCCAGTTTCT...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCAGAAACTGGCCCAACTaGTTGCAGGCACGGACGAGC +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIRNWPN*LQARTS
Trigger: GCTCGTCCGTGCCTGCAACCAGTTGGGCCAGTTTCT...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGCCTCGAACACAGTCTTaGCCGCGTAGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRPRTQS*PRSPAR
Trigger: ACGTGCAGGGCTACGCGGCCAAGACTGTGTTCGAGG...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAACTGGATCAGCGGGCTaGATCTCGGGTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPTGSAG*ISGLQL
Trigger: TAGCTGGAGACCCGAGATCCAGCCCGCTGATCCAGT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATACTGGATCAGCGGGCTaGATCTCGGGTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHTGSAG*ISGLQL
Trigger: TAGCTGGAGACCCGAGATCCAGCCCGCTGATCCAGT...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATTGCAGCAGGTGGAACTaGATCAGCGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHCSRWN*ISGLDL
Trigger: GAGATCCAGCCCGCTGATCCAGTTCCACCTGCTGCA...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGTGCAGCAGGTGGAACTaGATCAGCGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWCSRWN*ISGLDL
Trigger: GAGATCCAGCCCGCTGATCCAGTTCCACCTGCTGCA...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGTTGGAGTGCAGCAGGTaGAACTGGATCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLLECSR*NWISGL
Trigger: CAGCCCGCTGATCCAGTTCCACCTGCTGCACTCCAA...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTTGGAGTGCAGCAGGTaGAACTGGATCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPILECSR*NWISGL
Trigger: CAGCCCGCTGATCCAGTTCCACCTGCTGCACTCCAA...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCACGTCCTGGATGGTaGGCTTCACCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRARPGW*ASPPGR
Trigger: TCTTCCCGGAGGTGAAGCCCACCATCCAGGACGTGC...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGACACGGCGCTGGTACTaGCTGGGGCAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRTRRWY*LGQAQD
Trigger: GTCCTGAGCCTGCCCCAGCCAGTACCAGCGCCGTGT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCTGGGTGGTTTTCGTGTaGATGATTCCAGCTCCCACG +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPWVVFV*MIPAPT
Trigger: CGTGGGAGCTGGAATCATCCACACGAAAACCACCCA...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCTGGGTGGTTTTCGTGTaGATGATTCCAGCTCCCACG +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCWVVFV*MIPAPT
Trigger: CGTGGGAGCTGGAATCATCCACACGAAAACCACCCA...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCCCTCCAGGGACGACTaGACGGGGCCGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSPSRDD*TGPVEG
Trigger: TCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGG...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGATGGCATGCGGCCAATaGCCCCTTCACTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEMACGQ*PLHFLT
Trigger: GGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCAT...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGTCAGACGTGCAGCCTaGGTGCTGAGTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGVRRAA*VLSPDD
Trigger: GTCATCTGGACTCAGCACCCAGGCTGCACGTCTGAC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGCACTGCCCAGCAGCTaGAACATGAGAATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMALPSS*NMRMRA
Trigger: GGCCCTCATTCTCATGTTCCAGCTGCTGGGCAGTGC...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATCTGTGCTAAAGTGGTaGTCAGACTTGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLSVLKW*SDLWLQ
Trigger: CTGCAGCCACAAGTCTGATCACCACTTTAGCACAGA...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCGGCTCACTGTCATGGTaGATGATTAAGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCGSLSW*MIKLMA
Trigger: GGCCATCAGCTTAATCATTCACCATGACAGTGAGCC...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGTGGCACGCGGGAGCCTaGAGAGCCTCGAACACAGTC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRWHAGA*RASNTV
Trigger: GACTGTGTTCGAGGCTCTTCAGGCTCCCGCGTGCCA...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGCCCCCATACCTGAACTaGATGTTGAGGACTGGCGCC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRPPYLN*MLRTGA
Trigger: GGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGG...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCATTGGGTGCTTTGCTTTaGAGATGTTCTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPLGALL*RCSALP
Trigger: AGGAAGTGCAGAACATCTTCAAAGCAAAGCACCCAA...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGCTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWLSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGLSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTAGACGAGCACACCTCTaGGTCTTGCGCCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSRRAHL*VLRHRP
Trigger: GGGCCGGTGGCGCAAGACTCAGAGGTGTGCTCGTCT...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGAGTCCAGATGACAGGTaGGACACAAGCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRSPDDR*DTSRRW
Trigger: CCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACT...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGAGCAGCCTTTCCTCTaGTGGCGGGAGGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSAEQPFL*WREGSR
Trigger: CCTTGACCCCTCCCGCCATCAGAGGAAAGGCTGCTC...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCGATCAGACTTGTGGCTaGAGTTACCACACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPDQTCG*SYHTQV
Trigger: CACTTGGGTGTGGTAACTGCAGCCACAAGTCTGATC...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACTTGGTCTCGCGGTGCTaGAGAAACTGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHLVSRC*RNWPNW
Trigger: CCAGTTGGGCCAGTTTCTGCAGCACCGCGAGACCAA...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp AGTGCCACACTGAGGGCCCCTCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGTAAAGTTTAGGAACTaGGTGGAGGTCTTATTACCA +
Preference number: 4 (lower is better)
Translates to: SATLRAPLQRRTGKRCLGVKFRN*VEVLLP
Trigger: TGGTAATAAGACCTCCACGCAGTTCCTAAACTTTAC...CCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGAGGGGCCCTCAGTGTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTAACCAGGGTCAGCTGTaGTCCTCCCAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSANQGQL*SSQGPR
Trigger: CCTGGGCCCTTGGGAGGAGCACAGCTGACCCTGGTT...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGCAGTCCAGCTGGGACTaGAGCAAAACCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRQSSWD*SKTRVS
Trigger: GCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTG...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCTCCGGCCAGGACACGTaGTTTTGCCAGAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPSGQDT*FCQKSL
Trigger: TAATGACTTCTGGCAAAAGCACGTGTCCTGGCCGGA...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCAAGGCCTCGGCGACTaGAGGAGCATAACAGACGCC +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPQGLGD*RSITDA
Trigger: GGCGTCTGTTATGCTCCTGCAGTCGCCGAGGCCTTG...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCAGGAAGGACTCAGGCCTaGACCGTGGCCTGGGGACGC +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSGRTQA*TVAWGR
Trigger: GCGTCCCCAGGCCACGGTGCAGGCCTGAGTCCTTCC...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTAGGTGGCACATGGCATaGGGCCAATGGCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPRWHMA*GQWPLH
Trigger: GTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCT...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTGGAGGGGTCAAGGGATaGAGGAGATCCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPGGVKG*RRSTAA
Trigger: TGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGTTCGCGTTGGAGTGCTaGACCTTCTTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMFALEC*TFFDLG
Trigger: GCCCAAGTCGAAGAAGGTCCAGCACTCCAACGCGAA...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTTCGCGTTGGAGTGCTaGACCTTCTTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIFALEC*TFFDLG
Trigger: GCCCAAGTCGAAGAAGGTCCAGCACTCCAACGCGAA...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCATTCGCGTTGGAGTGCTaGACCTTCTTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPFALEC*TFFDLG
Trigger: GCCCAAGTCGAAGAAGGTCCAGCACTCCAACGCGAA...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGTTCGCGTTGGAGTGCTaGACCTTCTTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGFALEC*TFFDLG
Trigger: GCCCAAGTCGAAGAAGGTCCAGCACTCCAACGCGAA...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGTTCGCGTTGGAGTGCTaGACCTTCTTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGFALEC*TFFDLG
Trigger: GCCCAAGTCGAAGAAGGTCCAGCACTCCAACGCGAA...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACGGCATTCTTCGCGTTaGAGTGCTGGACCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPRHSSR*SAGPSS
Trigger: CGAAGAAGGTCCAGCACTCCAACGCGAAGAATGCCG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCGGCATTCTTCGCGTTaGAGTGCTGGACCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGRHSSR*SAGPSS
Trigger: CGAAGAAGGTCCAGCACTCCAACGCGAAGAATGCCG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCGGCATTCTTCGCGTTaGAGTGCTGGACCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGRHSSR*SAGPSS
Trigger: CGAAGAAGGTCCAGCACTCCAACGCGAAGAATGCCG...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACAGAAACTGGCCCAACTaGTTGCAGGCACGGACGAGC +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHRNWPN*LQARTS
Trigger: GCTCGTCCGTGCCTGCAACCAGTTGGGCCAGTTTCT...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGCTCGGCCACGATCTGTaGGGCGTTGCTGCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKLGHDL*GVAAVA
Trigger: TGCGACCGCAGCAACGCCCCACAGATCGTGGCCGAG...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCACTTCTCAGCCAGGATaGCGACCTTCAGCACAATCT +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCTSQPG*RPSAQS
Trigger: AGATTGTGCTGAAGGTCGCCATCCTGGCTGAGAAGT...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGTGCAGCAGGTGGAACTaGATCAGCGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRCSRWN*ISGLDL
Trigger: GAGATCCAGCCCGCTGATCCAGTTCCACCTGCTGCA...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTGCACGTCCTGGATGGTaGGCTTCACCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPARPGW*ASPPGR
Trigger: TCTTCCCGGAGGTGAAGCCCACCATCCAGGACGTGC...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGAGGCGCTGGTACTGGCTaGGGCAGGCTCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGGAGTG*GRLRTP
Trigger: GGGGGTCCTGAGCCTGCCCCAGCCAGTACCAGCGCC...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTACACGGCGCTGGTACTaGCTGGGGCAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSTRRWY*LGQAQD
Trigger: GTCCTGAGCCTGCCCCAGCCAGTACCAGCGCCGTGT...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGCACAGACACGTTCTaGAAGGTGCCCCCATACCTG +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPICTDTF*KVPPYL
Trigger: CAGGTATGGGGGCACCTTCCAGAACGTGTCTGTGCA...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCAGCCATTTCTGTCGGCTaGAAGAATTTGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPAISVG*KNLLRV
Trigger: CACTCTCAACAAATTCTTCCAGCCGACAGAAATGGC...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTAAGCAGGCATCCAATCTaGGTGGTTTTCGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: HHQTQNGLCERRTPLTWLSRHPI*VVFVWM
Trigger: CATCCACACGAAAACCACCCAGATTGGATGCCTGCT...TAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTCCACGCCATGCACAGTaGCACTGCTGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSAPRHAQ*HCCSQR
Trigger: CCTCTGGGAGCAGCAGTGCCACTGTGCATGGCGTGG...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGAGGACGCTCCTCCCCTaGCTGCACATCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRRTLLP*LHIQGL
Trigger: GAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCACTCAGGCCTGCACCGTaGCCTGGGGACGCCCACTCT +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSLRPAP*PGDAHS
Trigger: AGAGTGGGCGTCCCCAGGCCACGGTGCAGGCCTGAG...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGTCAGACGTGCAGCCTaGGTGCTGAGTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRVRRAA*VLSPDD
Trigger: GTCATCTGGACTCAGCACCCAGGCTGCACGTCTGAC...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGAGCCAGAACCTGTGCTaGGTGTGTTTAGGACAAACA +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMSQNLC*VCLGQT
Trigger: TGTTTGTCCTAAACACACCCAGCACAGGTTCTGGCT...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTCGCACGCCACTGACGTaGCTATGCTGTGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTRTPLT*LCCDQS
Trigger: GCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCG...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGCGCACGCCACTGACGTaGCTATGCTGTGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMRTPLT*LCCDQS
Trigger: GCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCG...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCCACCAGACCCAGAATaGCCTGTGCGAGAGGCGCAC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRPPDPE*PVREAH
Trigger: GTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTGG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTTCGCACTGCAGGGTCTaGGGGTGGGTAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSASHCRV*GWVALQ
Trigger: CTGCAGTGCTACCCACCCCCAGACCCTGCAGTGCGA...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTGCGGATATCCGAGATaGAGACCGCCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKCGYPR*RPPGPA
Trigger: TGCGGGGCCTGGCGGTCTTCATCTCGGATATCCGCA...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332231.9
ENST00000448903.7
CDS-3UTR TCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGACGTGGCTATGCTGTaGTCAAAGCCCGACACGCCG +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRDVAML*SKPDTP
Trigger: CGGCGTGTCGGGCTTTGATCACAGCATAGCCACGTC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGTTACCACACCCAAGTaGTGGTCATTGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGVTTPK*WSLSRC
Trigger: GCACCTGCTCAATGACCAGCACTTGGGTGTGGTAAC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGATGACCGTCTCGATGTaGGTCTTGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWMTVSM*VLTASW
Trigger: CCATGAGGCTGTCAAGACGCACATCGAGACGGTCAT...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCAGGTCTGTCACCGTaGTGGGGCCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPPGLSP*WGPSSS
Trigger: AGAAGAAGAAGGGCCCCAGCACGGTGACAGACCTGG...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CACAGCCCCTCCAGGGACGACTGGACGGGGCCGGTGGAAGGACTCAGGCCTGCAGTAAAGTTTAGGAACTaGGTGGAGGTCTTATTACCA +
Preference number: 4 (lower is better)
Translates to: HSPSRDDWTGPVEGLRPAVKFRN*VEVLLP
Trigger: TGGTAATAAGACCTCCACGCAGTTCCTAAACTTTAC...TGCAGGCCTGAGTCCTTCCACCGGCCCCGTCCAGTCGTCCCTGGAGGGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGGGCTTTGTTCAGGATaGTCTCCAGGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGGLCSG*SPGTQS
Trigger: TGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GAGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATGGGCTTTGTTCAGGATaGTCTCCAGGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: EPVHLGLQVRLQAQQASNGLCSG*SPGTQS
Trigger: TGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCC...ATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGGGCTTTGTTCAGGATaGTCTCCAGGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWGLCSG*SPGTQS
Trigger: TGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCC...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGACTTGGGCGGTTCTTaGGCTTTGTTCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGDLGGS*ALFRMV
Trigger: GACCATCCTGAACAAAGCCCAAGAACCGCCCAAGTC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGACTTGGGCGGTTCTTaGGCTTTGTTCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHDLGGS*ALFRMV
Trigger: GACCATCCTGAACAAAGCCCAAGAACCGCCCAAGTC...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGACTTGGGCGGTTCTTaGGCTTTGTTCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPDLGGS*ALFRMV
Trigger: GACCATCCTGAACAAAGCCCAAGAACCGCCCAAGTC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGGACTTGGGCGGTTCTTaGGCTTTGTTCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGDLGGS*ALFRMV
Trigger: GACCATCCTGAACAAAGCCCAAGAACCGCCCAAGTC...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGGACCTTCTTCGACTTaGGCGGTTCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPGPSST*AVLGLC
Trigger: ACAAAGCCCAAGAACCGCCCAAGTCGAAGAAGGTCC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCGGACCTTCTTCGACTTaGGCGGTTCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIGPSST*AVLGLC
Trigger: ACAAAGCCCAAGAACCGCCCAAGTCGAAGAAGGTCC...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGGACCTTCTTCGACTTaGGCGGTTCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGGPSST*AVLGLC
Trigger: ACAAAGCCCAAGAACCGCCCAAGTCGAAGAAGGTCC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGGACCTTCTTCGACTTaGGCGGTTCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWGPSST*AVLGLC
Trigger: ACAAAGCCCAAGAACCGCCCAAGTCGAAGAAGGTCC...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGTTCGCGTTGGAGTGCTaGACCTTCTTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRFALEC*TFFDLG
Trigger: GCCCAAGTCGAAGAAGGTCCAGCACTCCAACGCGAA...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGCGGCATTCTTCGCGTTaGAGTGCTGGACCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRRHSSR*SAGPSS
Trigger: CGAAGAAGGTCCAGCACTCCAACGCGAAGAATGCCG...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCCAATCTCTTCTCGGATaGAGTAGTCAGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCQSLLG*SSQLSP
Trigger: TGGAGACAGCTGACTACTCCATCCGAGAAGAGATTG...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGCAGCACAAGCCCAGCACGGCGTGTCACGGCACCTGGCACCACCAGACCCAGGATCAAGTTCAAGATaGTATCCACATACCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AAAQAQHGVSRHLAPPDPGSSSR*YPHTRC
Trigger: ACACCTGGTATGTGGATACCATCTTGAACTTGATCC...TGGGTCTGGTGGTGCCAGGTGCCGTGACACGCCGTGCTGGGCTTGTGCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCCTCGAACACAGTCTTaGCCGCGTAGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRPRTQS*PRSPAR
Trigger: ACGTGCAGGGCTACGCGGCCAAGACTGTGTTCGAGG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTTTGGAGTGCAGCAGGTaGAACTGGATCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPLECSR*NWISGL
Trigger: CAGCCCGCTGATCCAGTTCCACCTGCTGCACTCCAA...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACCTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHLNVED*RLREVG
Trigger: TCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAG...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGAGCCGGTACATCTaGGCTTGCAGGTTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSAVSRYI*ACRFGS
Trigger: GGAGCCGAACCTGCAAGCCCAGATGTACCGGCTCAC...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGTGAGCCGGTACATCTaGGCTTGCAGGTTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRVSRYI*ACRFGS
Trigger: GGAGCCGAACCTGCAAGCCCAGATGTACCGGCTCAC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGCAAGACACACGAGCCTaGTCTTCCATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGQDTRA*SSILRT
Trigger: AGTCCTGAGGATGGAAGACCAGGCTCGTGTGTCTTG...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACAAGACACACGAGCCTaGTCTTCCATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPQDTRA*SSILRT
Trigger: AGTCCTGAGGATGGAAGACCAGGCTCGTGTGTCTTG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCAAGACACACGAGCCTaGTCTTCCATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGQDTRA*SSILRT
Trigger: AGTCCTGAGGATGGAAGACCAGGCTCGTGTGTCTTG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGAGCCGCAGACATTGTaGGGTGCACACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILREPQTL*GAHTAG
Trigger: CCCTGCAGTGTGTGCACCCCACAATGTCTGCGGCTC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCCCACGGCGCTGGTACTaGCTGGGGCAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRIPRRWY*LGQAQD
Trigger: GTCCTGAGCCTGCCCCAGCCAGTACCAGCGCCGTGG...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTTCTGTGCTAAAGTGGTaGTCAGACTTGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTSVLKW*SDLWLQ
Trigger: CTGCAGCCACAAGTCTGATCACCACTTTAGCACAGA...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCATCTGTGCTAAAGTGGTaGTCAGACTTGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPSVLKW*SDLWLQ
Trigger: CTGCAGCCACAAGTCTGATCACCACTTTAGCACAGA...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGTCTGTGCTAAAGTGGTaGTCAGACTTGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGSVLKW*SDLWLQ
Trigger: CTGCAGCCACAAGTCTGATCACCACTTTAGCACAGA...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGGCTCACTGTCATGGTaGATGATTAAGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGGSLSW*MIKLMA
Trigger: GGCCATCAGCTTAATCATTCACCATGACAGTGAGCC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GAGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATGGCTCACTGTCATGGTaGATGATTAAGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: EPVHLGLQVRLQAQQASNGSLSW*MIKLMA
Trigger: GGCCATCAGCTTAATCATTCACCATGACAGTGAGCC...ATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACGGCCCTTCTTCTTCTTaGGCTTTGCCAAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHGPSSS*ALPRWR
Trigger: CCTCCATCTTGGCAAAGCTCAAGAAGAAGAAGGGCC...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCACAGAGGCCGAGTCTaGGAACACGTCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSHRGRV*EHVHEQ
Trigger: CTGCTCGTGGACGTGTTCTCAGACTCGGCCTCTGTG...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGAGTCCAGATGACAGGTaGGACACAAGCCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRSPDDR*DTSRRW
Trigger: CCACCTGCGGCTTGTGTCTCACCTGTCATCTGGACT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTGTGCAGCCTGGGTGCTaGGTCCAGATGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSVQPGC*VQMTGE
Trigger: CTCACCTGTCATCTGGACTCAGCACCCAGGCTGCAC...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGATCAGACTTGTGGCTaGAGTTACCACACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGDQTCG*SYHTQV
Trigger: CACTTGGGTGTGGTAACTGCAGCCACAAGTCTGATC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGATCAGACTTGTGGCTaGAGTTACCACACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPDQTCG*SYHTQV
Trigger: CACTTGGGTGTGGTAACTGCAGCCACAAGTCTGATC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGATCAGACTTGTGGCTaGAGTTACCACACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMDQTCG*SYHTQV
Trigger: CACTTGGGTGTGGTAACTGCAGCCACAAGTCTGATC...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCACTGGAGATCTGTGGATaGAGACGTCACGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPLEICG*RRHDSA
Trigger: AGCAGAATCGTGACGTCTGCATCCACAGATCTCCAG...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCTGGAGATCTGTGGATaGAGACGTCACGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGLEICG*RRHDSA
Trigger: AGCAGAATCGTGACGTCTGCATCCACAGATCTCCAG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGCTGGAGATCTGTGGATaGAGACGTCACGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWLEICG*RRHDSA
Trigger: AGCAGAATCGTGACGTCTGCATCCACAGATCTCCAG...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATTTCTTCGCGTTGGAGTaGTGGACCTTCTTCGACTTG +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHFFALE*WTFFDL
Trigger: CAAGTCGAAGAAGGTCCAGCACTCCAACGCGAAGAA...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGTTCTTCGCGTTGGAGTaGTGGACCTTCTTCGACTTG +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMFFALE*WTFFDL
Trigger: CAAGTCGAAGAAGGTCCAGCACTCCAACGCGAAGAA...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGTTCTTCGCGTTGGAGTaGTGGACCTTCTTCGACTTG +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLFFALE*WTFFDL
Trigger: CAAGTCGAAGAAGGTCCAGCACTCCAACGCGAAGAA...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCATTCTTCGCGTTGGAGTaGTGGACCTTCTTCGACTTG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPFFALE*WTFFDL
Trigger: CAAGTCGAAGAAGGTCCAGCACTCCAACGCGAAGAA...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGTTCTTCGCGTTGGAGTaGTGGACCTTCTTCGACTTG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGFFALE*WTFFDL
Trigger: CAAGTCGAAGAAGGTCCAGCACTCCAACGCGAAGAA...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCTTCTTCTTGAGCTTTaGCAAGATGGAGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGLLLEL*QDGGLP
Trigger: CGGGAGTCCTCCATCTTGGCAAAGCTCAAGAAGAAG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGCTTCTTCTTGAGCTTTaGCAAGATGGAGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWLLLEL*QDGGLP
Trigger: CGGGAGTCCTCCATCTTGGCAAAGCTCAAGAAGAAG...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATCTTCTTCTTGAGCTTTaGCAAGATGGAGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHLLLEL*QDGGLP
Trigger: CGGGAGTCCTCCATCTTGGCAAAGCTCAAGAAGAAG...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCCAGGTCTGTCACCGTaGTGGGGCCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRPGLSP*WGPSSS
Trigger: AGAAGAAGAAGGGCCCCAGCACGGTGACAGACCTGG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTCCAGGTCTGTCACCGTaGTGGGGCCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSAPGLSP*WGPSSS
Trigger: AGAAGAAGAAGGGCCCCAGCACGGTGACAGACCTGG...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGGAGACCCAGCAGGTCTaGCGACGGAGAAGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKETQQV*RRRRRR
Trigger: TCTACGCCTTCTCCGTCGGCAGACCTGCTGGGTCTC...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGCAGGACACGTGCTTTTaGCAGAAGTCATTACAAATA +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVQDTCF*QKSLQI
Trigger: TATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTG...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTTCCGGCCAGGACACGTaGTTTTGCCAGAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTSGQDT*FCQKSL
Trigger: TAATGACTTCTGGCAAAAGCACGTGTCCTGGCCGGA...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGCAAGGCCTCGGCGACTaGAGGAGCATAACAGACGCC +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKQGLGD*RSITDA
Trigger: GGCGTCTGTTATGCTCCTGCAGTCGCCGAGGCCTTG...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCAGTGGGGTGCACACACTaGAGGGGAGCTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSVGCTH*RGAVET
Trigger: GGTCTCCACAGCTCCCCTGCAGTGTGTGCACCCCAC...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACGGGCTTTGTTCAGGATaGTCTCCAGGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHGLCSG*SPGTQS
Trigger: TGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCC...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGGACCTTCTTCGACTTaGGCGGTTCTTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRGPSST*AVLGLC
Trigger: ACAAAGCCCAAGAACCGCCCAAGTCGAAGAAGGTCC...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGAGAAACTGGCCCAACTaGTTGCAGGCACGGACGAGC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRRNWPN*LQARTS
Trigger: GCTCGTCCGTGCCTGCAACCAGTTGGGCCAGTTTCT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGACTTCTCAGCCAGGATaGCGACCTTCAGCACAATCT +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGTSQPG*RPSAQS
Trigger: AGATTGTGCTGAAGGTCGCCATCCTGGCTGAGAAGT...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAACTTCTCAGCCAGGATaGCGACCTTCAGCACAATCT +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPTSQPG*RPSAQS
Trigger: AGATTGTGCTGAAGGTCGCCATCCTGGCTGAGAAGT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGACTGGATCAGCGGGCTaGATCTCGGGTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRTGSAG*ISGLQL
Trigger: TAGCTGGAGACCCGAGATCCAGCCCGCTGATCCAGT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGTGCAGCAGGTGGAACTaGATCAGCGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRCSRWN*ISGLDL
Trigger: GAGATCCAGCCCGCTGATCCAGTTCCACCTGCTGCA...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTGCACGTCCTGGATGGTaGGCTTCACCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSARPGW*ASPPGR
Trigger: TCTTCCCGGAGGTGAAGCCCACCATCCAGGACGTGC...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGCAGGACGCTCCTCCCCTGGCTGCACATCCAAGGCCTCGGCGACTGCAGGAAGTTTAGGAACTGCGTaGAGGTCTTATTACCATAAA +
Preference number: 4 (lower is better)
Translates to: PAGRSSPGCTSKASATAGSLGTA*RSYYHK
Trigger: TTTATGGTAATAAGACCTCCACGCAGTTCCTAAACT...TCCTGCAGTCGCCGAGGCCTTGGATGTGCAGCCAGGGGAGGAGCGTCCTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPLNVED*RLREVG
Trigger: TCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAG...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTTGCACAGACACGTTCTaGAAGGTGCCCCCATACCTG +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPCTDTF*KVPPYL
Trigger: CAGGTATGGGGGCACCTTCCAGAACGTGTCTGTGCA...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACTGGGTGGTTTTCGTGTaGATGATTCCAGCTCCCACG +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHWVVFV*MIPAPT
Trigger: CGTGGGAGCTGGAATCATCCACACGAAAACCACCCA...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAGCAGGCATCCAATCTaGGTGGTTTTCGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPSRHPI*VVFVWM
Trigger: CATCCACACGAAAACCACCCAGATTGGATGCCTGCT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCAGCAGGCATCCAATCTaGGTGGTTTTCGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPISRHPI*VVFVWM
Trigger: CATCCACACGAAAACCACCCAGATTGGATGCCTGCT...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGAGCAGGCATCCAATCTaGGTGGTTTTCGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGSRHPI*VVFVWM
Trigger: CATCCACACGAAAACCACCCAGATTGGATGCCTGCT...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTATGGCATGCGGCCAATaGCCCCTTCACTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSAMACGQ*PLHFLT
Trigger: GGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCAT...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGGACACAAGCCGCAGGTaGCACATGGCATGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKDTSRR*HMACGQ
Trigger: TTGGCCGCATGCCATGTGCCACCTGCGGCTTGTGTC...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGTCAGACGTGCAGCCTaGGTGCTGAGTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRVRRAA*VLSPDD
Trigger: GTCATCTGGACTCAGCACCCAGGCTGCACGTCTGAC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCAACCCTCAAGCACATGTaGCCACCCACCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSTLKHM*PPTLPA
Trigger: GGCAGGGAGGGTGGGTGGCCACATGTGCTTGAGGGT...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCGCACGCCACTGACGTaGCTATGCTGTGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPRTPLT*LCCDQS
Trigger: GCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCG...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGCACTGCCCAGCAGCTaGAACATGAGAATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRALPSS*NMRMRA
Trigger: GGCCCTCATTCTCATGTTCCAGCTGCTGGGCAGTGC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACTCTGTGCTAAAGTGGTaGTCAGACTTGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHSVLKW*SDLWLQ
Trigger: CTGCAGCCACAAGTCTGATCACCACTTTAGCACAGA...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCTGGCACGCGGGAGCCTaGAGAGCCTCGAACACAGTC +
Preference number: 4 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRIWHAGA*RASNTV
Trigger: GACTGTGTTCGAGGCTCTTCAGGCTCCCGCGTGCCA...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCACACAGAGGCCGAGTCTaGGAACACGTCCACGAGCAG +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSHRGRV*EHVHEQ
Trigger: CTGCTCGTGGACGTGTTCTCAGACTCGGCCTCTGTG...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGAGGTTCAGGTTAGGCTaGAGGTCGTCTGAACAGATT +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMRFRLG*RSSEQI
Trigger: AATCTGTTCAGACGACCTTCAGCCTAACCTGAACCT...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp CGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGAGGTTCAGGTTAGGCTaGAGGTCGTCTGAACAGATT +
Preference number: 4 (lower is better)
Translates to: RYIWACRFGSKRSRHPIWRFRLG*RSSEQI
Trigger: AATCTGTTCAGACGACCTTCAGCCTAACCTGAACCT...CCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp CAGGTGGCACATGGCATGCGGCCAATGGCCCCTTCACTTCCTGACCACACAGAGTGGTTTTCGTGTGGATaGTTCCAGCTCCCACGAAAT +
Preference number: 4 (lower is better)
Translates to: QVAHGMRPMAPSLPDHTEWFSCG*FQLPRN
Trigger: ATTTCGTGGGAGCTGGAATCATCCACACGAAAACCA...CTCTGTGTGGTCAGGAAGTGAAGGGGCCATTGGCCGCATGCCATGTGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGTGGTTTTCGTGTGGATaGTTCCAGCTCCCACGAAAT +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGWFSCG*FQLPRN
Trigger: ATTTCGTGGGAGCTGGAATCATCCACACGAAAACCA...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GGAGGGGTCAAGGGATGCAGGAGATCCACGGCAGCACACGCAGCCTGCAGGCGCAATTCACATAATCTCTaGGAAACGGCTTCCTTACTT +
Preference number: 4 (lower is better)
Translates to: GGVKGCRRSTAAHAACRRNSHNL*ETASLL
Trigger: AAGTAAGGAAGCCGTTTCTCAGAGATTATGTGAATT...GCGCCTGCAGGCTGCGTGTGCTGCCGTGGATCTCCTGCATCCCTTGACCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAACACACCTGTCATGGTaGATGATTAAGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPTHLSW*MIKLMA
Trigger: GGCCATCAGCTTAATCATTCACCATGACAGGTGTGT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534328.5
ENST00000626798.2
ENST00000626889.2
CDS-3UTR GCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCCAGGCGGCCTCGCACTaGAGGGTCTTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTQAASH*RVFWGW
Trigger: CCACCCCCAGAAGACCCTGCAGTGCGAGGCCGCCTG...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTTGGTCTCGCGGTGCTaGAGAAACTGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKLVSRC*RNWPNW
Trigger: CCAGTTGGGCCAGTTTCTGCAGCACCGCGAGACCAA...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTATGACCGTCTCGATGTaGGTCTTGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPMTVSM*VLTASW
Trigger: CCATGAGGCTGTCAAGACGCACATCGAGACGGTCAT...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCACTGCAGCTCCACGTCTaGGTTCCTGAGCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSLQLHV*VPELAV
Trigger: GACAGCCAGCTCAGGAACGCAGACGTGGAGCTGCAG...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TCTGCAGCGCCGCACAGGGAAGCGGTGCCTCGGGGAGCAGCCTTTCCTCTGATGCAGGACACGTGCTTTTaGCAGAAGTCATTACAAATA +
Preference number: 4 (lower is better)
Translates to: SAAPHREAVPRGAAFPLMQDTCF*QKSLQI
Trigger: TATTTGTAATGACTTCTGGCAAAAGCACGTGTCCTG...CATCAGAGGAAAGGCTGCTCCCCGAGGCACCGCTTCCCTGTGCGGCGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGCACACCTCTGAGTCTTaGGCCACCGGCCCACACTTT +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKHTSES*ATGPHF
Trigger: AAAGTGTGGGCCGGTGGCGCAAGACTCAGAGGTGTG...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTTTCTTTGACGAGGAGTaGCACACTGAGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSAFFDEE*HTEGPS
Trigger: AGAGGGGCCCTCAGTGTGGCACTCCTCGTCAAAGAA...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCAATGTCCAGTCGCCCATaGGGACAAGATCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSMSSRP*GQDRGT
Trigger: CGTCCCCCGATCTTGTCCCCATGGGCGACTGGACAT...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGAATCCTGGAGATCTGTaGATGCAGACGTCACGATTC +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGNPGDL*MQTSRF
Trigger: GAATCGTGACGTCTGCATCCACAGATCTCCAGGATT...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGAATCCTGGAGATCTGTaGATGCAGACGTCACGATTC +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMNPGDL*MQTSRF
Trigger: GAATCGTGACGTCTGCATCCACAGATCTCCAGGATT...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAATCCTGGAGATCTGTaGATGCAGACGTCACGATTC +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPNPGDL*MQTSRF
Trigger: GAATCGTGACGTCTGCATCCACAGATCTCCAGGATT...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTGGGCTTTGTTCAGGATaGTCTCCAGGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPGLCSG*SPGTQS
Trigger: TGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCC...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCGGCATTCTTCGCGTTaGAGTGCTGGACCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRRHSSR*SAGPSS
Trigger: CGAAGAAGGTCCAGCACTCCAACGCGAAGAATGCCG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATCAATCTCTTCTCGGATaGAGTAGTCAGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHQSLLG*SSQLSP
Trigger: TGGAGACAGCTGACTACTCCATCCGAGAAGAGATTG...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGCAATCTCTTCTCGGATaGAGTAGTCAGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGQSLLG*SSQLSP
Trigger: TGGAGACAGCTGACTACTCCATCCGAGAAGAGATTG...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCGGATCAAGTTCAAGATaGTATCCACATACCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPGSSSR*YPHTRC
Trigger: ACACCTGGTATGTGGATACCATCTTGAACTTGATCC...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTTTGGAGTGCAGCAGGTaGAACTGGATCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSLECSR*NWISGL
Trigger: CAGCCCGCTGATCCAGTTCCACCTGCTGCACTCCAA...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCTGCGTTCCTGAGCTaGCTGTCGCTGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGSAFLS*LSLRST
Trigger: CGTGCTGCGCAGCGACAGCCAGCTCAGGAACGCAGA...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCTCTGCGTTCCTGAGCTaGCTGTCGCTGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRISAFLS*LSLRST
Trigger: CGTGCTGCGCAGCGACAGCCAGCTCAGGAACGCAGA...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp CCTAGGCCGGCCCCACTCTCTCGCCTCTCAGGTGTCAGACGTGCAGCCTGGGTGAGTTTAGGAACTGCGTaGAGGTCTTATTACCATAAA +
Preference number: 4 (lower is better)
Translates to: PRPAPLSRLSGVRRAAWVSLGTA*RSYYHK
Trigger: TTTATGGTAATAAGACCTCCACGCAGTTCCTAAACT...CACCCAGGCTGCACGTCTGACACCTGAGAGGCGAGAGAGTGGGGCCGGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCTGAATGTTGAGGACTaGCGCCTCCGTGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRLNVED*RLREVG
Trigger: TCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCAAGACACACGAGCCTaGTCTTCCATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPQDTRA*SSILRT
Trigger: AGTCCTGAGGATGGAAGACCAGGCTCGTGTGTCTTG...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCGCACGCCACTGACGTaGCTATGCTGTGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRRTPLT*LCCDQS
Trigger: GCTTTGATCACAGCATAGCCACGTCAGTGGCGTGCG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGGTCGTCTGAACAGATTAGTGTTGGGGTAAAGTTTAGGAACTGCGTGGAGGTCTGCGGATATCCGAGATaGAGACCGCCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: RSSEQISVGVKFRNCVEVCGYPR*RPPGPA
Trigger: TGCGGGGCCTGGCGGTCTTCATCTCGGATATCCGCA...GACCTCCACGCAGTTCCTAAACTTTACCCCAACACTAATCTGTTCAGACGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528815.5
CDS-3UTR TCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGACCAAGGAGAAAGATaGAGAGCAACTTGCAGACGT +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRDQGER*RATCRR
Trigger: ACGTCTGCAAGTTGCTCTTCATCTTTCTCCTTGGTC...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGATCAGCTCACTGTTTaGGTTCACCAACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPDQLTV*VHQHRD
Trigger: ATCTCTGTGTTGGTGAACTCAAACAGTGAGCTGATC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp GGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGGGATCAGCTCACTGTTTaGGTTCACCAACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: GTSGLAGSAPSAAGIQSGDQLTV*VHQHRD
Trigger: ATCTCTGTGTTGGTGAACTCAAACAGTGAGCTGATC...CCCAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGATCAGCTCACTGTTTaGGTTCACCAACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGDQLTV*VHQHRD
Trigger: ATCTCTGTGTTGGTGAACTCAAACAGTGAGCTGATC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000534328.5
ENST00000625871.2
ENST00000626787.2
ENST00000626798.2
ENST00000626889.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCGATCAGCTCACTGTTTaGGTTCACCAACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIDQLTV*VHQHRD
Trigger: ATCTCTGTGTTGGTGAACTCAAACAGTGAGCTGATC...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCCCACGTCTGCGTTCCTaGGCTGGCTGTCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTPRLRS*AGCRCA
Trigger: TGCGCAGCGACAGCCAGCTCAGGAACGCAGACGTGG...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGGCCCTTCTTCTTCTTaGGCTTTGCCAAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSAGPSSS*ALPRWR
Trigger: CCTCCATCTTGGCAAAGCTCAAGAAGAAGAAGGGCC...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGGTCGTCTGAACAGATTAGTGTTGGGGTAAAGTTTAGGAACTGCGTGGAGGTCGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 4 (lower is better)
Translates to: RSSEQISVGVKFRNCVEVGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...GACCTCCACGCAGTTCCTAAACTTTACCCCAACACTAATCTGTTCAGACGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCTGAGCTTTTCCTCCTaGGCCACACACGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSLSFSS*ATHVCS
Trigger: GGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAG...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCACTGGCCCAACTGGTTaGAGGCACGGACGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRITGPTG*RHGRAG
Trigger: ACCTGCTCGTCCGTGCCTGCAACCAGTTGGGCCAGT...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCATTGGTCTCGCGGTGCTaGAGAAACTGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSLVSRC*RNWPNW
Trigger: CCAGTTGGGCCAGTTTCTGCAGCACCGCGAGACCAA...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGATGACCGTCTCGATGTaGGTCTTGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRMTVSM*VLTASW
Trigger: CCATGAGGCTGTCAAGACGCACATCGAGACGGTCAT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGACTGCAGCTCCACGTCTaGGTTCCTGAGCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGLQLHV*VPELAV
Trigger: GACAGCCAGCTCAGGAACGCAGACGTGGAGCTGCAG...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCTTCTTCTTGAGCTTTaGCAAGATGGAGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPLLLEL*QDGGLP
Trigger: CGGGAGTCCTCCATCTTGGCAAAGCTCAAGAAGAAG...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGCTTTGAAGATGTTCTaGACTTCCTGCTGTGGATTG +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGALKMF*TSCCGL
Trigger: CAATCCACAGCAGGAAGTGCAGAACATCTTCAAAGC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATGGCTTTGAAGATGTTCTaGACTTCCTGCTGTGGATTG +
Preference number: 4 (lower is better)
Translates to: RDPHSRQLRARVKTLKHMALKMF*TSCCGL
Trigger: CAATCCACAGCAGGAAGTGCAGAACATCTTCAAAGC...CATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGACGGTACATCTGGGCTTaGAGGTTCGGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGRYIWA*RFGSKR
Trigger: GCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCACCAAGATCCACCTTCTaGCGTGGCTGCCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSPRSTF*RGCHSP
Trigger: TGGACTGTGGCAGCCACGGCAGAAGGTGGATCTTGG...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTTTCTTTGACGAGGAGTaGCACACTGAGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSFFDEE*HTEGPS
Trigger: AGAGGGGCCCTCAGTGTGGCACTCCTCGTCAAAGAA...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCCCCCATACCTGAACTGAATGTTGAGGACTGGCGCCTCCGTGAAGTCGGACACAATCCTGGAGATCTGTaGATGCAGACGTCACGATTC +
Preference number: 4 (lower is better)
Translates to: APIPELNVEDWRLREVGHNPGDL*MQTSRF
Trigger: GAATCGTGACGTCTGCATCCACAGATCTCCAGGATT...GTGTCCGACTTCACGGAGGCGCCAGTCCTCAACATTCAGTTCAGGTATGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTTCGCGTTGGAGTGCTaGACCTTCTTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKFALEC*TFFDLG
Trigger: GCCCAAGTCGAAGAAGGTCCAGCACTCCAACGCGAA...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCAAGAAACTGGCCCAACTaGTTGCAGGCACGGACGAGC +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSRNWPN*LQARTS
Trigger: GCTCGTCCGTGCCTGCAACCAGTTGGGCCAGTTTCT...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCCTCGGCCACGATCTGTaGGGCGTTGCTGCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTLGHDL*GVAAVA
Trigger: TGCGACCGCAGCAACGCCCCACAGATCGTGGCCGAG...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp TGGGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGACCTCGAACACAGTCTTaGCCGCGTAGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: WVVFVWMIPAPTKFAGLGPRTQS*PRSPAR
Trigger: ACGTGCAGGGCTACGCGGCCAAGACTGTGTTCGAGG...TCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGGCCCTTTTACAAACAAACCTaGCAAAGTTGTCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: VQLGLQQNQGQLCSSQGPFYKQT*QSCLRS
Trigger: GCTCCGAAGACAACTTTGCCAGGTTTGTTTGTAAAA...GGGCCCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCTGGCCATTTCTGTCGGCTaGAAGAATTTGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PVHLGLQVRLQAQQASNLAISVG*KNLLRV
Trigger: CACTCTCAACAAATTCTTCCAGCCGACAGAAATGGC...CAGATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTCCAGGCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAGCCATTTCTGTCGGCTaGAAGAATTTGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: VQAELFLLSHTRVFPSSPAISVG*KNLLRV
Trigger: CACTCTCAACAAATTCTTCCAGCCGACAGAAATGGC...TGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTCAAGACACACGAGCCTaGTCTTCCATCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSAQDTRA*SSILRT
Trigger: AGTCCTGAGGATGGAAGACCAGGCTCGTGTGTCTTG...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGAGCCAGAACCTGTGCTaGGTGTGTTTAGGACAAACA +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRSQNLC*VCLGQT
Trigger: TGTTTGTCCTAAACACACCCAGCACAGGTTCTGGCT...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGGCTCACTGTCATGGTaGATGATTAAGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRGSLSW*MIKLMA
Trigger: GGCCATCAGCTTAATCATTCACCATGACAGTGAGCC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGGTCGTCTGAACAGATTAGTGTTGGGGTAAAGTTTAGGAACTGCGTGGAGGTCTGTAGCCGCCCACTTTaGCCAGGTTCTCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: RSSEQISVGVKFRNCVEVCSRPL*PGSRGT
Trigger: CGTGCCACGAGAACCTGGTCAAAGTGGGCGGCTACA...GACCTCCACGCAGTTCCTAAACTTTACCCCAACACTAATCTGTTCAGACGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCGGACTGGCGCCTCCGTaGAGTCGGACACGCACTCTA +
Preference number: 4 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTGLAPP*SRTRTL
Trigger: TAGAGTGCGTGTCCGACTTCACGGAGGCGCCAGTCC...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGTTCTTCGCGTTGGAGTaGTGGACCTTCTTCGACTTG +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRFFALE*WTFFDL
Trigger: CAAGTCGAAGAAGGTCCAGCACTCCAACGCGAAGAA...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCTTGGTCTCGCGGTGCTaGAGAAACTGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRILVSRC*RNWPNW
Trigger: CCAGTTGGGCCAGTTTCTGCAGCACCGCGAGACCAA...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGATGACCGTCTCGATGTaGGTCTTGACAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKMTVSM*VLTASW
Trigger: CCATGAGGCTGTCAAGACGCACATCGAGACGGTCAT...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCCGATCTGTGGGGCGTTaGTGCGGTCGCACATGGCGT +
Preference number: 4 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTRSVGR*CGRTWR
Trigger: ACGCCATGTGCGACCGCAGCAACGCCCCACAGATCG...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp AGGTCGTCTGAACAGATTAGTGTTGGGGTAAAGTTTAGGAACTGCGTGGAGGTCATGTCCAGTCGCCCATaGGGACAAGATCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: RSSEQISVGVKFRNCVEVMSSRP*GQDRGT
Trigger: CGTCCCCCGATCTTGTCCCCATGGGCGACTGGACAT...GACCTCCACGCAGTTCCTAAACTTTACCCCAACACTAATCTGTTCAGACGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTAATCCTGGAGATCTGTaGATGCAGACGTCACGATTC +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPNPGDL*MQTSRF
Trigger: GAATCGTGACGTCTGCATCCACAGATCTCCAGGATT...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGGTCGTCTGAACAGATTAGTGTTGGGGTAAAGTTTAGGAACTGCGTGGAGGTCCACTGCAGGGTCTTCTaGGGGTGGGTAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: RSSEQISVGVKFRNCVEVHCRVF*GWVALQ
Trigger: CTGCAGTGCTACCCACCCCCAGAAGACCCTGCAGTG...GACCTCCACGCAGTTCCTAAACTTTACCCCAACACTAATCTGTTCAGACGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCACGGCATTCTTCGCGTTaGAGTGCTGGACCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSRHSSR*SAGPSS
Trigger: CGAAGAAGGTCCAGCACTCCAACGCGAAGAATGCCG...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGGATCAAGTTCAAGATaGTATCCACATACCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGGSSSR*YPHTRC
Trigger: ACACCTGGTATGTGGATACCATCTTGAACTTGATCC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCTTGGAGTGCAGCAGGTaGAACTGGATCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRILECSR*NWISGL
Trigger: CAGCCCGCTGATCCAGTTCCACCTGCTGCACTCCAA...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTGCGTTCCTGAGCTaGCTGTCGCTGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTSAFLS*LSLRST
Trigger: CGTGCTGCGCAGCGACAGCCAGCTCAGGAACGCAGA...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GGTGGTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCCACTCCTGTCCCGCTTaGTGTCCTCCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GGFRVDDSSSHEIRRIRIHSCPA*CPPGLS
Trigger: TGACAGACCTGGAGGACACCAAGCGGGACAGGAGTG...GATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp CACCAGACCCAGAATGGCCTGTGCGAGAGGCGCACGCCACTGACGTGGCTATGCAGTTTAGGAACTGCGTaGAGGTCTTATTACCATAAA +
Preference number: 4 (lower is better)
Translates to: HQTQNGLCERRTPLTWLCSLGTA*RSYYHK
Trigger: TTTATGGTAATAAGACCTCCACGCAGTTCCTAAACT...GCATAGCCACGTCAGTGGCGTGCGCCTCTCGCACAGGCCATTCTGGGTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTAGCAGGCATCCAATCTaGGTGGTTTTCGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSASRHPI*VVFVWM
Trigger: CATCCACACGAAAACCACCCAGATTGGATGCCTGCT...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR TCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCGCAGTCTCAGCAGTTTaGCAGACAGCCAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTAVSAV*QTAREP
Trigger: CGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGC...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCTGTAGCCGCCCACTTTaGCCAGGTTCTCGTGGCACG +
Preference number: 4 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTCSRPL*PGSRGT
Trigger: CGTGCCACGAGAACCTGGTCAAAGTGGGCGGCTACA...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTAGGTTCAGGTTAGGCTaGAGGTCGTCTGAACAGATT +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSARFRLG*RSSEQI
Trigger: AATCTGTTCAGACGACCTTCAGCCTAACCTGAACCT...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp TGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCAGTTACCACACCCAAGTaGTGGTCATTGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WERRTVTSGQDTCFCQKSVTTPK*WSLSRC
Trigger: GCACCTGCTCAATGACCAGCACTTGGGTGTGGTAAC...TGACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCTCCCACGAAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCCTGCAGCTCCACGTCTaGGTTCCTGAGCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSHEIRRIRINFFKKCRTLQLHV*VPELAV
Trigger: GACAGCCAGCTCAGGAACGCAGACGTGGAGCTGCAG...GGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTTCGTGGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGTCTTCTTCTTGAGCTTTaGCAAGATGGAGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: AGKGEQLHPARTRAFARSLLLEL*QDGGLP
Trigger: CGGGAGTCCTCCATCTTGGCAAAGCTCAAGAAGAAG...ACTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTGTAAAGTTTAGGAACTaGGTGGAGGTCTTATTACCA +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTVKFRN*VEVLLP
Trigger: TGGTAATAAGACCTCCACGCAGTTCCTAAACTTTAC...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp AGCCGGTACATCTGGGCTTGCAGGTTCGGCTCCAAGCGCAGCAGGCATCCAATCGTAAAGTTTAGGAACTaGGTGGAGGTCTTATTACCA +
Preference number: 4 (lower is better)
Translates to: SRYIWACRFGSKRSRHPIVKFRN*VEVLLP
Trigger: TGGTAATAAGACCTCCACGCAGTTCCTAAACTTTAC...GATTGGATGCCTGCTGCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp GCTGAGCTTTTCCTCCTGAGCCACACACGTGTGTTCCCGTCCAGCCCAAAGGGGGTAAAGTTTAGGAACTaGGTGGAGGTCTTATTACCA +
Preference number: 4 (lower is better)
Translates to: AELFLLSHTRVFPSSPKGVKFRN*VEVLLP
Trigger: TGGTAATAAGACCTCCACGCAGTTCCTAAACTTTAC...CCCCTTTGGGCTGGACGGGAACACACGTGTGTGGCTCAGGAGGAAAAGCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGATGTTCTGCACTTCCTaGTGTGGATTGCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRMFCTS*CGLLNC
Trigger: GCAGTTGAGCAATCCACAGCAGGAAGTGCAGAACAT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR GCA 90 bp CTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTGCTTTGAAGATGTTCTaGACTTCCTGCTGTGGATTG +
Preference number: 4 (lower is better)
Translates to: LGKQSSWDCSKTRVSCAPALKMF*TSCCGL
Trigger: CAATCCACAGCAGGAAGTGCAGAACATCTTCAAAGC...AGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR GCA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTCGGTACATCTGGGCTTaGAGGTTCGGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTRYIWA*RFGSKR
Trigger: GCGCTTGGAGCCGAACCTGCAAGCCCAGATGTACCG...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR GCA 90 bp AACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTGTGCTCCTCCCAAGGTCTAGATTAAAATCCTaGCTGGGAAAACAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NSPAGTAAKPGSAVLLPRSRLKS*LGKQSS
Trigger: GCTGGACTGTTTTCCCAGGCAGGATTTTAATCTAGA...CCTTGGGAGGAGCACAGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AATCCTGCCTGGGAAAACAGTCCAGCTGGGACTGCAGCAAAACCAGGGTCAGCTAATCCTGGAGATCTGTaGATGCAGACGTCACGATTC +
Preference number: 4 (lower is better)
Translates to: NPAWENSPAGTAAKPGSANPGDL*MQTSRF
Trigger: GAATCGTGACGTCTGCATCCACAGATCTCCAGGATT...AGCTGACCCTGGTTTTGCTGCAGTCCCAGCTGGACTGTTTTCCCAGGCAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGAATCCTGGAGATCTGTaGATGCAGACGTCACGATTC +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRNPGDL*MQTSRF
Trigger: GAATCGTGACGTCTGCATCCACAGATCTCCAGGATT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTCACTGCAGGGTCTTCTaGGGGTGGGTAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTHCRVF*GWVALQ
Trigger: CTGCAGTGCTACCCACCCCCAGAAGACCCTGCAGTG...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGCAATCTCTTCTCGGATaGAGTAGTCAGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRQSLLG*SSQLSP
Trigger: TGGAGACAGCTGACTACTCCATCCGAGAAGAGATTG...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000528815.5
ENST00000625871.2
ENST00000626787.2
ENST00000627250.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AAATTCGCAGGATTAGGATCAACTTCTTCAAGAAGTGCAGAACCAAATCCAATGGGCGCTGGTACTGGCTaGGGCAGGCTCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: KFAGLGSTSSRSAEPNPMGAGTG*GRLRTP
Trigger: GGGGGTCCTGAGCCTGCCCCAGCCAGTACCAGCGCC...CATTGGATTTGGTTCTGCACTTCTTGAAGAAGTTGATCCTAATCCTGCGAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR CCA 90 bp GGCAGCACGGGCCATCTCAGTGACACTCCCACAAACGCCACGTTCACGCCAACTTTTTACAAACAAACCTaGCAAAGTTGTCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GSTGHLSDTPTNATFTPTFYKQT*QSCLRS
Trigger: GCTCCGAAGACAACTTTGCCAGGTTTGTTTGTAAAA...AGTTGGCGTGAACGTGGCGTTTGTGGGAGTGTCACTGAGATGGCCCGTGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp CAGGGACCCGCACAGCAGGCAACTGAGGGCCAGGGTGAAAACCCTCAAGCACATTTTTACAAACAAACCTaGCAAAGTTGTCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: QGPAQQATEGQGENPQAHFYKQT*QSCLRS
Trigger: GCTCCGAAGACAACTTTGCCAGGTTTGTTTGTAAAA...ATGTGCTTGAGGGTTTTCACCCTGGCCCTCAGTTGCCTGCTGTGCGGGTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp AGCTGGGAAAGGAGAACAGTTACATCCGGCCAGGACACGTGCTTTTGCCAGAAGAGCAGGCATCCAATCTaGGTGGTTTTCGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: SWERRTVTSGQDTCFCQKSRHPI*VVFVWM
Trigger: CATCCACACGAAAACCACCCAGATTGGATGCCTGCT...CTTCTGGCAAAAGCACGTGTCCTGGCCGGATGTAACTGTTCTCCTTTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGAGCCAGAACCTGTGCTaGGTGTGTTTAGGACAAACA +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRSQNLC*VCLGQT
Trigger: TGTTTGTCCTAAACACACCCAGCACAGGTTCTGGCT...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332231.9
ENST00000448903.7
ENST00000626787.2
ENST00000629952.2
CDS-3UTR CCA 90 bp GTTTTCGTGTGGATGATTCCAGCTCCCACGAAATTCGCAGGATTAGGATCAACTAACAAACCACGGCGCTaGTACTGGCTGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VFVWMIPAPTKFAGLGSTNKPRR*YWLGQA
Trigger: AGCCTGCCCCAGCCAGTACCAGCGCCGTGGTTTGTT...AGTTGATCCTAATCCTGCGAATTTCGTGGGAGCTGGAATCATCCACACGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528815.5
ENST00000625871.2
ENST00000627250.2
CDS-3UTR TCA 90 bp ACGGCACAGACGAAGACAACACAAGACACACGAGCCTGGTCTTCCATCCTCAGGGATCAGCTCACTGTTTaGGTTCACCAACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: TAQTKTTQDTRAWSSILRDQLTV*VHQHRD
Trigger: ATCTCTGTGTTGGTGAACTCAAACAGTGAGCTGATC...CCTGAGGATGGAAGACCAGGCTCGTGTGTCTTGTGTTGTCTTCGTCTGTGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 t